Query 009441
Match_columns 534
No_of_seqs 251 out of 1825
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 05:16:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iuj_A Prolyl endopeptidase; h 100.0 8.1E-71 2.8E-75 613.1 57.2 448 49-534 9-472 (693)
2 2xe4_A Oligopeptidase B; hydro 100.0 1E-69 3.5E-74 608.5 56.5 460 49-534 30-527 (751)
3 2bkl_A Prolyl endopeptidase; m 100.0 4.2E-64 1.4E-68 559.4 55.0 448 51-534 2-464 (695)
4 2xdw_A Prolyl endopeptidase; a 100.0 1.9E-63 6.4E-68 555.5 56.1 452 50-534 4-484 (710)
5 1yr2_A Prolyl oligopeptidase; 100.0 2.7E-62 9.4E-67 548.7 53.8 453 49-534 37-506 (741)
6 4hvt_A Ritya.17583.B, post-pro 100.0 2.6E-57 8.8E-62 499.0 42.8 444 62-534 13-496 (711)
7 3azo_A Aminopeptidase; POP fam 99.9 2.2E-21 7.4E-26 213.7 31.8 314 198-534 86-442 (662)
8 2ecf_A Dipeptidyl peptidase IV 99.8 6.4E-17 2.2E-21 180.2 32.3 308 193-529 154-530 (741)
9 4a5s_A Dipeptidyl peptidase 4 99.8 1.3E-16 4.5E-21 178.2 32.7 316 193-529 114-515 (740)
10 2z3z_A Dipeptidyl aminopeptida 99.8 5E-16 1.7E-20 172.1 36.4 309 193-530 123-499 (706)
11 1z68_A Fibroblast activation p 99.8 2.9E-16 1E-20 174.4 30.6 318 193-530 112-510 (719)
12 3o4h_A Acylamino-acid-releasin 99.8 2.7E-16 9.3E-21 170.4 28.3 296 192-532 66-376 (582)
13 1xfd_A DIP, dipeptidyl aminope 99.7 2.8E-16 9.6E-21 174.4 25.7 316 193-529 116-509 (723)
14 2gop_A Trilobed protease; beta 99.6 7.4E-13 2.5E-17 133.0 32.2 243 193-471 61-337 (347)
15 3c5m_A Oligogalacturonate lyas 99.3 1.1E-10 3.9E-15 118.7 23.1 253 193-472 38-337 (396)
16 3pe7_A Oligogalacturonate lyas 99.3 8.7E-10 3E-14 112.1 29.1 257 196-472 41-337 (388)
17 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.9E-09 6.5E-14 111.6 30.6 201 193-408 181-386 (415)
18 1l0q_A Surface layer protein; 99.3 6E-09 2E-13 105.9 32.8 293 192-509 75-387 (391)
19 2ecf_A Dipeptidyl peptidase IV 99.2 2.9E-09 9.9E-14 118.2 28.9 200 192-408 110-368 (741)
20 2z3z_A Dipeptidyl aminopeptida 99.2 3.9E-09 1.3E-13 116.5 29.5 271 173-470 53-397 (706)
21 2hqs_A Protein TOLB; TOLB, PAL 99.2 2E-08 6.7E-13 103.9 32.1 248 199-470 140-393 (415)
22 3pe7_A Oligogalacturonate lyas 99.2 4E-09 1.4E-13 107.1 26.5 250 196-465 86-385 (388)
23 2ojh_A Uncharacterized protein 99.1 9.7E-08 3.3E-12 91.9 30.5 199 193-409 44-258 (297)
24 4a5s_A Dipeptidyl peptidase 4 99.1 3.5E-09 1.2E-13 118.0 22.8 212 195-409 175-449 (740)
25 1z68_A Fibroblast activation p 99.1 3E-09 1E-13 117.8 20.8 224 173-409 46-346 (719)
26 2gop_A Trilobed protease; beta 99.1 5.6E-08 1.9E-12 97.0 26.8 226 129-406 68-330 (347)
27 2xdw_A Prolyl endopeptidase; a 99.1 2.7E-08 9.1E-13 110.3 26.5 256 198-466 79-370 (710)
28 3c5m_A Oligogalacturonate lyas 99.0 1.8E-08 6.3E-13 102.2 20.6 247 196-471 86-391 (396)
29 3azo_A Aminopeptidase; POP fam 99.0 2.1E-07 7.3E-12 101.7 28.0 209 191-409 130-369 (662)
30 1xfd_A DIP, dipeptidyl aminope 98.9 7.4E-08 2.5E-12 106.4 22.1 211 194-407 176-441 (723)
31 1yr2_A Prolyl oligopeptidase; 98.9 1.7E-07 5.8E-12 104.4 24.6 252 198-466 114-397 (741)
32 1l0q_A Surface layer protein; 98.9 4.1E-06 1.4E-10 84.7 32.9 241 193-468 34-279 (391)
33 1k32_A Tricorn protease; prote 98.9 1.2E-07 4.3E-12 109.6 24.1 181 193-396 298-492 (1045)
34 3s25_A Hypothetical 7-bladed b 98.9 6.7E-07 2.3E-11 88.2 24.8 220 129-408 62-292 (302)
35 3s25_A Hypothetical 7-bladed b 98.9 7.3E-06 2.5E-10 80.7 31.9 226 127-412 21-256 (302)
36 2bkl_A Prolyl endopeptidase; m 98.8 1.7E-07 5.8E-12 103.6 22.2 255 197-466 74-353 (695)
37 2ojh_A Uncharacterized protein 98.8 1.5E-06 5E-11 83.5 26.2 233 215-471 20-265 (297)
38 3iuj_A Prolyl endopeptidase; h 98.8 2.9E-07 9.9E-12 101.7 23.3 206 194-409 178-405 (693)
39 3o4h_A Acylamino-acid-releasin 98.8 3.1E-07 1E-11 99.0 21.8 197 193-409 24-227 (582)
40 3vgz_A Uncharacterized protein 98.8 1.1E-05 3.7E-10 80.1 29.8 246 193-468 43-307 (353)
41 2xe4_A Oligopeptidase B; hydro 98.7 4E-06 1.4E-10 93.4 27.2 208 194-409 224-458 (751)
42 3vgz_A Uncharacterized protein 98.7 1.6E-05 5.6E-10 78.7 28.2 225 193-450 91-334 (353)
43 1pby_B Quinohemoprotein amine 98.6 1.4E-05 4.7E-10 78.6 24.2 242 193-468 36-314 (337)
44 3u4y_A Uncharacterized protein 98.5 0.00012 4.2E-09 71.8 29.9 199 195-412 44-254 (331)
45 4g56_B MGC81050 protein; prote 98.5 2.9E-05 9.8E-10 78.1 25.0 250 192-467 44-304 (357)
46 3u4y_A Uncharacterized protein 98.5 0.00012 4.2E-09 71.8 28.9 245 197-471 4-259 (331)
47 1k32_A Tricorn protease; prote 98.5 3.8E-05 1.3E-09 88.7 28.6 143 192-349 339-492 (1045)
48 1nir_A Nitrite reductase; hemo 98.4 6.7E-05 2.3E-09 80.2 26.5 254 193-468 224-518 (543)
49 2vdu_B TRNA (guanine-N(7)-)-me 98.4 0.00029 9.9E-09 72.9 30.2 247 192-468 104-397 (450)
50 4h5i_A Guanine nucleotide-exch 98.4 2.8E-05 9.5E-10 78.5 21.8 200 193-409 136-343 (365)
51 1ri6_A Putative isomerase YBHE 98.4 0.00027 9.2E-09 69.3 28.0 255 193-472 40-318 (343)
52 3zwl_B Eukaryotic translation 98.3 0.0012 4.1E-08 65.1 31.7 198 192-412 34-251 (369)
53 3hfq_A Uncharacterized protein 98.3 0.00064 2.2E-08 67.3 29.6 257 193-472 42-327 (347)
54 2mad_H Methylamine dehydrogena 98.3 0.00094 3.2E-08 67.6 29.6 117 197-320 27-158 (373)
55 3bws_A Protein LP49; two-domai 98.3 0.00026 9.1E-09 72.3 25.7 201 192-408 213-431 (433)
56 3hfq_A Uncharacterized protein 98.3 0.00019 6.4E-09 71.2 23.7 204 193-412 88-321 (347)
57 3bws_A Protein LP49; two-domai 98.3 0.00072 2.5E-08 69.0 28.7 199 192-412 171-392 (433)
58 4gqb_B Methylosome protein 50; 98.2 0.00085 2.9E-08 67.0 28.4 251 192-468 32-293 (344)
59 3scy_A Hypothetical bacterial 98.2 0.0046 1.6E-07 61.4 33.5 257 194-470 53-345 (361)
60 1gxr_A ESG1, transducin-like e 98.2 0.0018 6E-08 63.1 29.6 239 192-468 53-300 (337)
61 3zwl_B Eukaryotic translation 98.2 0.002 6.7E-08 63.6 29.2 202 192-409 76-304 (369)
62 3mkq_A Coatomer beta'-subunit; 98.2 0.0017 5.8E-08 72.1 31.5 195 192-409 15-217 (814)
63 2ynn_A Coatomer subunit beta'; 98.1 0.0068 2.3E-07 58.8 31.2 196 192-409 15-217 (304)
64 1ri6_A Putative isomerase YBHE 98.1 0.00036 1.2E-08 68.4 22.1 201 192-409 85-310 (343)
65 1jmx_B Amine dehydrogenase; ox 98.1 0.00043 1.5E-08 68.1 21.6 116 193-320 45-177 (349)
66 2dg1_A DRP35, lactonase; beta 98.1 0.0099 3.4E-07 58.1 31.3 247 192-463 46-315 (333)
67 3scy_A Hypothetical bacterial 98.0 0.00055 1.9E-08 68.2 21.7 160 193-364 157-339 (361)
68 1nir_A Nitrite reductase; hemo 98.0 0.0032 1.1E-07 67.1 28.8 250 193-467 181-461 (543)
69 1pby_B Quinohemoprotein amine 98.0 0.00047 1.6E-08 67.4 20.5 133 218-364 12-163 (337)
70 3sjl_D Methylamine dehydrogena 98.0 0.0015 5.2E-08 66.1 24.0 241 196-467 83-366 (386)
71 3ow8_A WD repeat-containing pr 98.0 0.0082 2.8E-07 58.9 28.8 194 192-409 82-279 (321)
72 4aez_A CDC20, WD repeat-contai 98.0 0.0057 2E-07 61.9 28.4 195 192-409 136-336 (401)
73 1gxr_A ESG1, transducin-like e 98.0 0.0052 1.8E-07 59.6 27.0 187 192-403 143-333 (337)
74 3vl1_A 26S proteasome regulato 98.0 0.0068 2.3E-07 61.3 28.7 196 192-408 141-364 (420)
75 1jof_A Carboxy-CIS,CIS-muconat 98.0 0.0032 1.1E-07 63.0 25.9 209 193-412 42-294 (365)
76 4gqb_B Methylosome protein 50; 97.9 0.0016 5.3E-08 65.1 22.7 194 192-408 129-330 (344)
77 1qks_A Cytochrome CD1 nitrite 97.9 0.004 1.4E-07 66.6 27.1 255 193-468 242-542 (567)
78 4ery_A WD repeat-containing pr 97.9 0.019 6.6E-07 55.4 34.1 194 192-409 25-223 (312)
79 2oiz_A Aromatic amine dehydrog 97.9 0.0046 1.6E-07 62.0 25.6 119 199-320 12-142 (361)
80 2ghs_A AGR_C_1268P; regucalcin 97.9 0.021 7.1E-07 56.2 30.0 197 194-413 52-262 (326)
81 1pgu_A Actin interacting prote 97.9 0.0041 1.4E-07 66.3 26.5 199 193-412 21-240 (615)
82 1jmx_B Amine dehydrogenase; ox 97.9 0.0017 5.7E-08 63.8 21.3 151 196-364 5-175 (349)
83 4ery_A WD repeat-containing pr 97.8 0.023 7.9E-07 54.9 29.3 195 192-409 67-268 (312)
84 3g4e_A Regucalcin; six bladed 97.8 0.011 3.8E-07 57.2 26.8 229 194-451 16-263 (297)
85 4g56_B MGC81050 protein; prote 97.8 0.0018 6.1E-08 64.8 21.4 199 192-412 141-346 (357)
86 1got_B GT-beta; complex (GTP-b 97.8 0.035 1.2E-06 54.7 31.4 196 192-409 57-257 (340)
87 1vyh_C Platelet-activating fac 97.8 0.025 8.4E-07 57.5 29.4 195 192-412 110-329 (410)
88 3ei3_B DNA damage-binding prot 97.8 0.026 8.9E-07 56.2 29.1 193 193-409 76-282 (383)
89 3e5z_A Putative gluconolactona 97.8 0.014 4.7E-07 56.2 25.9 237 193-467 30-289 (296)
90 2aq5_A Coronin-1A; WD40 repeat 97.7 0.015 5.1E-07 58.7 26.7 199 192-409 83-299 (402)
91 2pm9_A Protein WEB1, protein t 97.7 0.0039 1.3E-07 62.8 22.2 203 192-412 69-296 (416)
92 1nr0_A Actin interacting prote 97.7 0.019 6.3E-07 61.9 28.8 195 195-412 23-223 (611)
93 1erj_A Transcriptional repress 97.7 0.0093 3.2E-07 60.2 24.6 192 192-408 66-286 (393)
94 3vl1_A 26S proteasome regulato 97.7 0.011 3.7E-07 59.8 25.0 150 195-364 61-212 (420)
95 4h5i_A Guanine nucleotide-exch 97.7 0.0013 4.5E-08 66.1 17.9 146 193-347 179-331 (365)
96 2aq5_A Coronin-1A; WD40 repeat 97.7 0.0025 8.5E-08 64.5 20.2 184 192-389 133-325 (402)
97 2mad_H Methylamine dehydrogena 97.7 0.014 4.8E-07 58.9 25.2 205 195-412 70-352 (373)
98 1r5m_A SIR4-interacting protei 97.7 0.0075 2.6E-07 60.6 23.2 193 192-409 110-319 (425)
99 3ow8_A WD repeat-containing pr 97.7 0.0047 1.6E-07 60.7 21.1 191 193-407 125-319 (321)
100 3mkq_A Coatomer beta'-subunit; 97.7 0.014 4.8E-07 64.6 27.3 195 192-409 57-259 (814)
101 1r5m_A SIR4-interacting protei 97.7 0.027 9.1E-07 56.4 27.2 192 192-409 47-278 (425)
102 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.024 8.1E-07 58.2 26.9 196 192-408 151-392 (450)
103 1sq9_A Antiviral protein SKI8; 97.6 0.023 7.8E-07 56.7 26.2 198 191-408 122-394 (397)
104 3c75_H MADH, methylamine dehyd 97.6 0.018 6.2E-07 59.1 25.2 117 198-320 80-211 (426)
105 2j04_A TAU60, YPL007P, hypothe 97.6 0.0071 2.4E-07 64.0 22.4 229 193-471 18-261 (588)
106 2pm9_A Protein WEB1, protein t 97.6 0.0014 4.8E-08 66.2 16.7 205 192-409 14-249 (416)
107 1k8k_C P40, ARP2/3 complex 41 97.6 0.01 3.5E-07 58.5 22.5 197 193-412 11-235 (372)
108 3sjl_D Methylamine dehydrogena 97.6 0.012 4.2E-07 59.4 22.5 116 197-320 39-171 (386)
109 3fm0_A Protein CIAO1; WDR39,SG 97.5 0.0096 3.3E-07 58.9 21.6 197 192-407 18-225 (345)
110 3ei3_B DNA damage-binding prot 97.5 0.035 1.2E-06 55.2 25.6 201 192-408 165-381 (383)
111 1yfq_A Cell cycle arrest prote 97.5 0.06 2E-06 52.3 26.4 193 192-409 13-225 (342)
112 1erj_A Transcriptional repress 97.5 0.061 2.1E-06 54.1 27.1 195 192-412 125-343 (393)
113 3dr2_A Exported gluconolactona 97.5 0.021 7.1E-07 55.4 22.2 236 193-462 47-304 (305)
114 1jof_A Carboxy-CIS,CIS-muconat 97.4 0.009 3.1E-07 59.7 20.0 121 192-317 146-290 (365)
115 4gga_A P55CDC, cell division c 97.4 0.11 3.7E-06 52.7 28.2 250 176-467 94-356 (420)
116 1nr0_A Actin interacting prote 97.4 0.025 8.4E-07 60.9 23.8 197 192-409 61-270 (611)
117 1qks_A Cytochrome CD1 nitrite 97.4 0.034 1.2E-06 59.3 24.3 193 197-412 160-375 (567)
118 3dw8_B Serine/threonine-protei 97.3 0.077 2.6E-06 53.7 26.0 32 192-228 30-61 (447)
119 2oiz_A Aromatic amine dehydrog 97.3 0.064 2.2E-06 53.5 24.6 74 195-270 54-140 (361)
120 4a11_B DNA excision repair pro 97.3 0.17 5.9E-06 50.1 29.7 196 192-409 45-276 (408)
121 2ynn_A Coatomer subunit beta'; 97.3 0.09 3.1E-06 50.7 24.3 195 192-409 57-259 (304)
122 3lrv_A PRE-mRNA-splicing facto 97.3 0.13 4.3E-06 50.5 25.7 153 192-360 127-290 (343)
123 1k8k_C P40, ARP2/3 complex 41 97.3 0.055 1.9E-06 53.2 23.0 194 192-405 54-272 (372)
124 2xyi_A Probable histone-bindin 97.2 0.04 1.4E-06 56.3 22.5 199 192-408 183-409 (430)
125 4ggc_A P55CDC, cell division c 97.2 0.15 5.2E-06 48.6 28.3 82 176-271 14-99 (318)
126 4gga_A P55CDC, cell division c 97.2 0.048 1.6E-06 55.3 22.9 113 288-408 280-394 (420)
127 2j04_A TAU60, YPL007P, hypothe 97.2 0.023 7.8E-07 60.2 20.3 187 192-405 87-295 (588)
128 3jrp_A Fusion protein of prote 97.2 0.082 2.8E-06 51.9 23.8 196 192-409 13-240 (379)
129 4aez_A CDC20, WD repeat-contai 97.1 0.086 3E-06 53.0 23.4 197 192-409 178-380 (401)
130 3i2n_A WD repeat-containing pr 97.1 0.097 3.3E-06 50.9 23.2 198 192-409 20-243 (357)
131 3k26_A Polycomb protein EED; W 97.1 0.11 3.8E-06 50.6 23.6 114 192-319 71-193 (366)
132 4a11_B DNA excision repair pro 97.1 0.13 4.5E-06 50.9 24.4 114 192-319 101-219 (408)
133 1pgu_A Actin interacting prote 97.1 0.054 1.9E-06 57.4 22.7 197 193-409 67-283 (615)
134 3lrv_A PRE-mRNA-splicing facto 97.1 0.016 5.4E-07 57.2 17.2 112 192-315 172-291 (343)
135 2pbi_B Guanine nucleotide-bind 97.1 0.27 9.1E-06 48.6 32.1 196 192-409 66-271 (354)
136 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.25 8.6E-06 48.5 25.6 197 192-408 63-282 (345)
137 3sfz_A APAF-1, apoptotic pepti 97.1 0.03 1E-06 65.4 21.6 195 192-413 963-1161(1249)
138 1got_B GT-beta; complex (GTP-b 97.1 0.27 9.2E-06 48.1 27.2 193 193-409 100-301 (340)
139 3sfz_A APAF-1, apoptotic pepti 97.1 0.1 3.5E-06 60.9 26.1 143 192-348 617-763 (1249)
140 1vyh_C Platelet-activating fac 97.0 0.33 1.1E-05 49.0 26.7 189 192-403 194-407 (410)
141 3dsm_A Uncharacterized protein 97.0 0.19 6.6E-06 49.1 24.1 236 201-467 52-304 (328)
142 2iwa_A Glutamine cyclotransfer 97.0 0.16 5.6E-06 48.3 22.4 192 194-408 24-236 (266)
143 1mda_H Methylamine dehydrogena 97.0 0.08 2.7E-06 53.2 20.8 108 206-318 34-158 (368)
144 4ggc_A P55CDC, cell division c 96.9 0.18 6.2E-06 48.1 22.9 112 289-408 201-314 (318)
145 3k26_A Polycomb protein EED; W 96.9 0.23 8E-06 48.2 24.1 153 192-363 20-191 (366)
146 3c75_H MADH, methylamine dehyd 96.9 0.068 2.3E-06 54.8 20.4 74 195-270 122-209 (426)
147 3dw8_B Serine/threonine-protei 96.9 0.12 4E-06 52.3 22.5 113 192-318 179-315 (447)
148 2ymu_A WD-40 repeat protein; u 96.9 0.47 1.6E-05 49.7 27.8 191 192-412 346-540 (577)
149 2xzm_R RACK1; ribosome, transl 96.9 0.36 1.2E-05 47.2 27.2 192 192-409 78-285 (343)
150 3jrp_A Fusion protein of prote 96.9 0.32 1.1E-05 47.5 24.5 198 192-406 57-286 (379)
151 1npe_A Nidogen, entactin; glyc 96.9 0.32 1.1E-05 45.7 27.7 198 192-412 37-240 (267)
152 2pbi_B Guanine nucleotide-bind 96.8 0.43 1.5E-05 47.0 25.6 187 193-402 157-352 (354)
153 3iz6_a 40S ribosomal protein R 96.8 0.12 4.2E-06 51.5 21.1 201 192-412 68-282 (380)
154 3dwl_C Actin-related protein 2 96.8 0.016 5.3E-07 57.6 14.2 199 192-409 13-236 (377)
155 3f3f_A Nucleoporin SEH1; struc 96.8 0.39 1.3E-05 45.9 27.4 117 192-320 13-145 (351)
156 4aow_A Guanine nucleotide-bind 96.8 0.41 1.4E-05 46.0 28.8 196 192-409 40-246 (340)
157 3dm0_A Maltose-binding peripla 96.8 0.13 4.6E-06 55.9 22.4 194 192-409 432-632 (694)
158 3v7d_B Cell division control p 96.8 0.52 1.8E-05 47.9 25.8 186 197-407 275-463 (464)
159 2ece_A 462AA long hypothetical 96.7 0.072 2.5E-06 54.6 18.5 136 179-316 126-287 (462)
160 3mmy_A MRNA export factor; mRN 96.7 0.46 1.6E-05 46.0 32.1 149 192-363 41-198 (368)
161 4e54_B DNA damage-binding prot 96.7 0.034 1.1E-06 56.9 16.4 196 193-409 122-327 (435)
162 2ymu_A WD-40 repeat protein; u 96.7 0.81 2.8E-05 47.9 31.6 192 192-412 305-499 (577)
163 2hes_X YDR267CP; beta-propelle 96.6 0.43 1.5E-05 46.4 23.1 196 192-403 60-276 (330)
164 3dwl_C Actin-related protein 2 96.6 0.073 2.5E-06 52.6 17.6 112 192-316 57-175 (377)
165 2ece_A 462AA long hypothetical 96.6 0.018 6.3E-07 59.0 12.9 122 195-319 192-353 (462)
166 3hrp_A Uncharacterized protein 96.6 0.29 9.9E-06 49.7 22.0 202 190-412 130-356 (409)
167 3gre_A Serine/threonine-protei 96.6 0.57 2E-05 47.2 24.3 199 192-409 113-359 (437)
168 4aow_A Guanine nucleotide-bind 96.5 0.6 2.1E-05 44.8 25.2 196 192-409 88-286 (340)
169 3i2n_A WD repeat-containing pr 96.5 0.54 1.9E-05 45.4 23.2 194 192-408 67-290 (357)
170 2oit_A Nucleoporin 214KDA; NH2 96.5 0.043 1.5E-06 56.4 15.3 114 192-317 94-222 (434)
171 3dm0_A Maltose-binding peripla 96.5 0.86 2.9E-05 49.4 26.5 198 192-412 384-594 (694)
172 2xyi_A Probable histone-bindin 96.5 0.21 7.3E-06 50.7 20.3 199 192-409 130-353 (430)
173 2dg1_A DRP35, lactonase; beta 96.4 0.75 2.6E-05 44.4 26.1 203 193-409 89-316 (333)
174 4e54_B DNA damage-binding prot 96.4 0.07 2.4E-06 54.4 16.1 116 193-320 212-329 (435)
175 3vu4_A KMHSV2; beta-propeller 96.2 0.11 3.8E-06 51.4 16.2 70 192-270 197-271 (355)
176 3frx_A Guanine nucleotide-bind 96.2 0.04 1.4E-06 53.7 12.7 99 192-304 198-306 (319)
177 3g4e_A Regucalcin; six bladed 96.2 0.33 1.1E-05 46.5 19.0 150 190-349 97-262 (297)
178 1yfq_A Cell cycle arrest prote 96.2 0.95 3.3E-05 43.4 25.5 194 192-412 58-284 (342)
179 3nol_A Glutamine cyclotransfer 96.2 0.71 2.4E-05 43.6 20.4 188 194-406 46-253 (262)
180 3jro_A Fusion protein of prote 96.1 0.42 1.4E-05 52.7 21.6 196 192-409 11-238 (753)
181 2oaj_A Protein SNI1; WD40 repe 96.1 0.55 1.9E-05 53.0 22.9 111 192-320 19-131 (902)
182 3dsm_A Uncharacterized protein 96.1 1.2 4E-05 43.4 24.7 228 206-467 4-256 (328)
183 3vu4_A KMHSV2; beta-propeller 96.0 1.4 4.6E-05 43.4 25.9 190 192-412 21-229 (355)
184 3qqz_A Putative uncharacterize 96.0 1.1 3.8E-05 42.2 23.8 213 174-408 12-252 (255)
185 2xzm_R RACK1; ribosome, transl 95.9 0.13 4.5E-06 50.4 15.0 103 192-304 215-329 (343)
186 1sq9_A Antiviral protein SKI8; 95.9 1.4 4.9E-05 43.2 29.1 198 192-412 18-269 (397)
187 2pm7_B Protein transport prote 95.9 1.3 4.3E-05 42.2 27.1 114 192-319 11-133 (297)
188 2o7r_A CXE carboxylesterase; a 95.8 0.0082 2.8E-07 59.3 5.4 86 440-528 6-95 (338)
189 3v7d_B Cell division control p 95.8 1.9 6.6E-05 43.6 29.2 235 192-467 164-424 (464)
190 1mda_H Methylamine dehydrogena 95.8 0.82 2.8E-05 45.7 20.0 60 195-254 69-142 (368)
191 3v65_B Low-density lipoprotein 95.6 2.1 7.1E-05 42.9 28.8 198 193-412 118-320 (386)
192 3iz6_a 40S ribosomal protein R 95.6 0.04 1.4E-06 55.2 9.6 100 192-302 251-362 (380)
193 3mmy_A MRNA export factor; mRN 95.6 1.8 6E-05 41.7 25.2 71 192-271 88-161 (368)
194 2ghs_A AGR_C_1268P; regucalcin 95.6 1.8 6.3E-05 41.9 22.3 163 190-363 133-315 (326)
195 1vlq_A Acetyl xylan esterase; 95.6 0.00044 1.5E-08 68.4 -4.9 46 480-528 62-107 (337)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 95.6 1.7 5.6E-05 41.3 26.4 244 193-464 20-299 (314)
197 3mbr_X Glutamine cyclotransfer 95.5 1.6 5.3E-05 40.8 19.9 189 195-408 25-234 (243)
198 2oit_A Nucleoporin 214KDA; NH2 95.5 0.3 1E-05 50.0 16.1 115 192-318 151-278 (434)
199 4ao6_A Esterase; hydrolase, th 95.4 0.0088 3E-07 56.8 3.9 44 483-530 27-70 (259)
200 3nol_A Glutamine cyclotransfer 95.4 1.9 6.3E-05 40.8 19.9 160 285-468 43-205 (262)
201 3gre_A Serine/threonine-protei 95.4 2.5 8.7E-05 42.3 24.3 111 195-319 175-293 (437)
202 3nok_A Glutaminyl cyclase; bet 95.2 0.66 2.3E-05 43.9 16.0 175 196-395 60-254 (268)
203 3odt_A Protein DOA1; ubiquitin 95.2 2 7E-05 40.3 29.4 235 192-468 20-259 (313)
204 3dr2_A Exported gluconolactona 95.2 0.32 1.1E-05 46.8 14.3 154 193-362 133-304 (305)
205 1npe_A Nidogen, entactin; glyc 95.1 2.1 7.2E-05 39.9 27.6 229 202-467 1-241 (267)
206 2w18_A PALB2, fancn, partner a 95.1 0.15 5.1E-06 50.5 11.6 58 192-250 158-241 (356)
207 3frx_A Guanine nucleotide-bind 95.1 2.5 8.7E-05 40.5 25.9 190 192-408 67-266 (319)
208 2fp8_A Strictosidine synthase; 94.9 2.8 9.6E-05 40.3 20.9 157 192-363 127-312 (322)
209 3fvz_A Peptidyl-glycine alpha- 94.9 2.9 9.8E-05 40.4 28.7 206 192-412 25-279 (329)
210 3jro_A Fusion protein of prote 94.9 1.6 5.6E-05 47.9 20.8 199 192-409 55-285 (753)
211 2p4o_A Hypothetical protein; p 94.8 3 0.0001 39.9 27.4 198 193-412 34-243 (306)
212 3v64_C Agrin; beta propeller, 94.7 3.5 0.00012 40.5 29.1 198 193-412 75-277 (349)
213 3no2_A Uncharacterized protein 94.6 3.1 0.00011 39.3 24.7 223 215-467 13-255 (276)
214 3e5z_A Putative gluconolactona 94.5 0.81 2.8E-05 43.4 15.0 151 193-364 117-286 (296)
215 3v65_B Low-density lipoprotein 94.1 5.3 0.00018 39.8 25.4 152 194-362 162-316 (386)
216 3hrp_A Uncharacterized protein 94.0 5.7 0.00019 40.0 22.5 110 196-318 176-298 (409)
217 2j04_B YDR362CP, TAU91; beta p 94.0 3.8 0.00013 42.9 20.2 194 192-408 209-427 (524)
218 4gq1_A NUP37; propeller, trans 93.9 4.5 0.00015 40.1 19.8 71 192-271 138-219 (393)
219 1rwi_B Serine/threonine-protei 93.8 4 0.00014 37.5 20.9 190 193-408 69-263 (270)
220 1ijq_A LDL receptor, low-densi 93.8 5.1 0.00017 38.6 29.6 199 193-412 32-240 (316)
221 2iwa_A Glutamine cyclotransfer 93.6 5 0.00017 37.9 19.9 161 286-468 22-185 (266)
222 1rwi_B Serine/threonine-protei 93.3 4.8 0.00017 37.0 20.8 192 192-408 25-221 (270)
223 2jbw_A Dhpon-hydrolase, 2,6-di 93.2 0.074 2.5E-06 53.5 5.0 80 443-527 84-163 (386)
224 3f3f_A Nucleoporin SEH1; struc 93.2 5.7 0.00019 37.4 23.0 104 192-305 59-191 (351)
225 1fwx_A Nitrous oxide reductase 93.1 10 0.00035 40.1 21.2 259 196-473 90-440 (595)
226 3m0c_C LDL receptor, low-densi 92.8 14 0.00047 40.8 29.6 199 193-412 426-634 (791)
227 2oaj_A Protein SNI1; WD40 repe 92.5 1.1 3.7E-05 50.6 13.8 114 192-320 100-244 (902)
228 3nuz_A Putative acetyl xylan e 92.5 0.13 4.3E-06 52.2 5.6 44 481-527 87-130 (398)
229 2qe8_A Uncharacterized protein 92.2 4.7 0.00016 39.2 16.7 159 193-363 122-336 (343)
230 1l7a_A Cephalosporin C deacety 92.2 0.17 5.9E-06 48.4 5.9 44 481-528 51-94 (318)
231 1n7d_A LDL receptor, low-densi 92.1 1.2 4.1E-05 48.6 13.2 196 194-412 409-616 (699)
232 2j04_B YDR362CP, TAU91; beta p 92.0 4.4 0.00015 42.4 17.0 202 192-409 135-386 (524)
233 3v64_C Agrin; beta propeller, 91.9 10 0.00034 37.1 27.2 151 194-362 119-273 (349)
234 3mbr_X Glutamine cyclotransfer 91.8 8.2 0.00028 35.9 20.0 160 285-468 21-183 (243)
235 3p5b_L Low density lipoprotein 91.7 12 0.0004 37.5 28.6 199 193-412 114-322 (400)
236 1gkl_A Endo-1,4-beta-xylanase 91.7 0.28 9.6E-06 47.4 6.8 44 483-528 38-81 (297)
237 3fcy_A Xylan esterase 1; alpha 91.6 0.24 8.1E-06 48.6 6.2 46 481-530 77-122 (346)
238 3qh4_A Esterase LIPW; structur 91.5 0.23 7.9E-06 48.4 6.0 39 482-525 56-94 (317)
239 3doh_A Esterase; alpha-beta hy 91.5 0.21 7.1E-06 50.1 5.8 42 486-528 144-186 (380)
240 3ga7_A Acetyl esterase; phosph 91.5 0.25 8.6E-06 48.1 6.3 39 482-526 59-97 (326)
241 3g8y_A SUSD/RAGB-associated es 91.5 0.21 7.3E-06 50.3 5.9 43 482-527 83-125 (391)
242 3ls2_A S-formylglutathione hyd 91.3 0.27 9.2E-06 46.4 6.1 45 484-529 13-58 (280)
243 1fwx_A Nitrous oxide reductase 91.2 14 0.00049 39.0 19.6 62 193-254 136-213 (595)
244 2hes_X YDR267CP; beta-propelle 91.2 11 0.00037 36.1 24.5 192 192-404 16-227 (330)
245 1n7d_A LDL receptor, low-densi 91.2 2.8 9.5E-05 45.7 14.8 219 218-467 387-617 (699)
246 2vpj_A Kelch-like protein 12; 91.1 10 0.00035 35.7 23.9 256 199-472 12-286 (301)
247 2z2n_A Virginiamycin B lyase; 91.0 9.7 0.00033 35.2 28.1 232 192-466 58-297 (299)
248 3sov_A LRP-6, low-density lipo 90.8 12 0.00042 36.0 28.0 198 193-412 37-240 (318)
249 3no2_A Uncharacterized protein 90.7 11 0.00038 35.4 19.8 175 193-395 39-231 (276)
250 2hdw_A Hypothetical protein PA 90.7 0.44 1.5E-05 46.8 7.2 46 482-529 64-109 (367)
251 3p5b_L Low density lipoprotein 90.6 15 0.00051 36.7 27.9 175 218-408 93-276 (400)
252 3i6y_A Esterase APC40077; lipa 90.6 0.28 9.6E-06 46.2 5.5 45 484-529 15-60 (280)
253 4hw6_A Hypothetical protein, I 90.5 9.6 0.00033 38.7 17.4 155 192-363 140-303 (433)
254 3bg1_A Protein SEC13 homolog; 90.3 1.7 5.7E-05 41.8 10.9 101 192-302 15-123 (316)
255 2qe8_A Uncharacterized protein 90.3 8.9 0.00031 37.1 16.5 125 192-320 18-156 (343)
256 1jjf_A Xylanase Z, endo-1,4-be 90.1 0.59 2E-05 43.8 7.3 45 483-528 29-74 (268)
257 3m0c_C LDL receptor, low-densi 90.1 26 0.00088 38.6 27.2 156 193-365 473-633 (791)
258 3tc9_A Hypothetical hydrolase; 89.5 16 0.00054 36.9 18.0 156 192-363 138-300 (430)
259 1xip_A Nucleoporin NUP159; bet 89.3 9.3 0.00032 38.2 15.8 107 194-315 130-252 (388)
260 1lzl_A Heroin esterase; alpha/ 89.3 0.44 1.5E-05 46.2 5.9 42 482-526 47-89 (323)
261 2z2n_A Virginiamycin B lyase; 89.3 13 0.00046 34.2 29.7 237 192-470 16-260 (299)
262 3sov_A LRP-6, low-density lipo 89.1 17 0.00057 35.1 26.3 156 193-366 81-240 (318)
263 3odt_A Protein DOA1; ubiquitin 89.1 14 0.00048 34.2 22.5 186 193-409 107-296 (313)
264 4hvt_A Ritya.17583.B, post-pro 89.1 21 0.00071 38.8 19.4 162 196-363 245-429 (711)
265 2hm7_A Carboxylesterase; alpha 88.9 0.51 1.7E-05 45.4 5.9 40 482-525 44-83 (310)
266 3tc9_A Hypothetical hydrolase; 88.8 4.4 0.00015 41.1 13.3 117 192-317 180-300 (430)
267 3nok_A Glutaminyl cyclase; bet 88.7 16 0.00055 34.4 19.0 158 285-468 55-214 (268)
268 3bg1_A Protein SEC13 homolog; 88.6 17 0.00058 34.5 17.3 70 192-270 59-136 (316)
269 2pm7_B Protein transport prote 88.6 16 0.00055 34.2 26.6 94 192-295 55-156 (297)
270 3kya_A Putative phosphatase; s 88.2 24 0.00081 36.5 18.2 160 192-363 140-340 (496)
271 3ain_A 303AA long hypothetical 88.1 0.86 3E-05 44.4 7.0 40 482-526 61-100 (323)
272 4gq1_A NUP37; propeller, trans 88.0 9.1 0.00031 37.8 14.8 33 193-229 189-221 (393)
273 1ijq_A LDL receptor, low-densi 88.0 19 0.00065 34.4 26.6 173 218-408 11-194 (316)
274 2ovr_B FBW7, F-BOX/WD repeat p 87.9 23 0.00079 35.2 30.8 189 193-413 202-394 (445)
275 2wir_A Pesta, alpha/beta hydro 87.9 0.67 2.3E-05 44.6 6.0 39 483-526 48-86 (313)
276 2fp8_A Strictosidine synthase; 87.8 19 0.00066 34.2 25.6 159 239-413 83-271 (322)
277 2qm0_A BES; alpha-beta structu 87.7 0.43 1.5E-05 45.3 4.4 41 485-526 17-58 (275)
278 1pjx_A Dfpase, DIISOPROPYLFLUO 87.3 19 0.00065 33.6 19.4 161 192-365 118-300 (314)
279 3iii_A COCE/NOND family hydrol 86.9 0.85 2.9E-05 48.4 6.5 41 484-529 39-79 (560)
280 2c7b_A Carboxylesterase, ESTE1 86.5 0.95 3.2E-05 43.4 6.2 40 482-526 44-83 (311)
281 4b6g_A Putative esterase; hydr 85.7 1.2 4.2E-05 41.8 6.5 43 485-529 21-64 (283)
282 2ism_A Putative oxidoreductase 84.7 31 0.001 33.6 20.2 117 193-318 33-178 (352)
283 2qc5_A Streptogramin B lactona 84.6 24 0.00084 32.4 29.4 237 192-470 21-265 (300)
284 3e4d_A Esterase D; S-formylglu 84.3 1.1 3.8E-05 41.8 5.4 43 485-529 14-57 (278)
285 1cru_A Protein (soluble quinop 84.3 26 0.00089 35.7 16.2 106 193-304 29-162 (454)
286 1mpx_A Alpha-amino acid ester 84.3 1.3 4.4E-05 47.5 6.5 39 481-523 20-58 (615)
287 1p22_A F-BOX/WD-repeat protein 84.2 35 0.0012 33.8 27.2 185 197-412 138-327 (435)
288 2b9v_A Alpha-amino acid ester 84.1 1.3 4.4E-05 48.0 6.4 37 483-523 34-70 (652)
289 1jkm_A Brefeldin A esterase; s 83.5 1.7 5.7E-05 43.0 6.6 42 482-526 78-119 (361)
290 3fcx_A FGH, esterase D, S-form 82.7 1.5 5E-05 41.0 5.5 43 485-529 15-58 (282)
291 2g8s_A Glucose/sorbosone dehyd 82.2 22 0.00075 34.7 14.2 119 193-318 20-173 (353)
292 3h2g_A Esterase; xanthomonas o 81.3 1.7 5.9E-05 43.5 5.7 46 483-529 43-92 (397)
293 2qc5_A Streptogramin B lactona 80.8 34 0.0012 31.3 26.7 189 192-408 63-259 (300)
294 3kya_A Putative phosphatase; s 80.6 18 0.00061 37.4 13.1 122 190-317 185-340 (496)
295 4hw6_A Hypothetical protein, I 80.5 10 0.00036 38.4 11.4 117 192-317 183-303 (433)
296 2gzs_A IROE protein; enterobac 78.7 1.7 5.8E-05 41.3 4.4 42 484-526 11-53 (278)
297 3ebl_A Gibberellin receptor GI 78.6 2.8 9.5E-05 41.5 6.1 43 482-526 60-122 (365)
298 2ovr_B FBW7, F-BOX/WD repeat p 78.2 56 0.0019 32.3 25.2 184 201-409 248-442 (445)
299 3mve_A FRSA, UPF0255 protein V 75.3 3.7 0.00013 41.5 6.1 41 483-528 165-205 (415)
300 1zgk_A Kelch-like ECH-associat 75.0 56 0.0019 30.7 20.8 254 198-472 21-295 (308)
301 1cru_A Protein (soluble quinop 74.5 77 0.0026 32.1 16.1 161 239-405 30-257 (454)
302 1p22_A F-BOX/WD-repeat protein 74.4 70 0.0024 31.5 26.4 185 193-408 176-364 (435)
303 2zsh_A Probable gibberellin re 74.1 4.3 0.00015 39.6 6.0 41 483-526 69-123 (351)
304 3fvz_A Peptidyl-glycine alpha- 74.0 61 0.0021 30.7 24.7 200 192-408 92-321 (329)
305 1jji_A Carboxylesterase; alpha 74.0 2.8 9.5E-05 40.2 4.6 35 485-526 55-89 (311)
306 1k8q_A Triacylglycerol lipase, 73.3 3.9 0.00013 39.6 5.6 46 483-529 24-71 (377)
307 3das_A Putative oxidoreductase 73.0 32 0.0011 33.7 12.0 119 193-318 34-183 (347)
308 2w18_A PALB2, fancn, partner a 71.2 81 0.0028 30.9 21.4 41 261-303 203-245 (356)
309 3q7m_A Lipoprotein YFGL, BAMB; 70.8 77 0.0026 30.4 26.1 131 339-497 238-370 (376)
310 3d0k_A Putative poly(3-hydroxy 70.7 5.3 0.00018 37.9 5.7 39 487-528 25-66 (304)
311 3q7m_A Lipoprotein YFGL, BAMB; 70.5 78 0.0027 30.4 19.2 113 336-469 99-212 (376)
312 3das_A Putative oxidoreductase 70.3 41 0.0014 32.9 12.1 160 239-406 35-232 (347)
313 3hxk_A Sugar hydrolase; alpha- 69.2 2.1 7E-05 39.9 2.3 37 489-526 17-53 (276)
314 3bjr_A Putative carboxylestera 68.9 3.1 0.0001 39.0 3.5 41 485-526 18-60 (283)
315 4a0p_A LRP6, LRP-6, low-densit 68.9 1.2E+02 0.0042 32.1 30.0 193 193-409 39-237 (628)
316 3ii7_A Kelch-like protein 7; p 68.2 77 0.0026 29.5 23.2 236 218-472 25-280 (306)
317 2i3d_A AGR_C_3351P, hypothetic 67.2 4.5 0.00015 37.0 4.2 35 485-525 22-56 (249)
318 3ii7_A Kelch-like protein 7; p 66.2 85 0.0029 29.2 16.4 109 297-409 12-127 (306)
319 3a9g_A Putative uncharacterize 66.1 99 0.0034 29.9 22.1 118 193-318 31-178 (354)
320 4a0p_A LRP6, LRP-6, low-densit 65.3 1.4E+02 0.0049 31.5 28.1 153 193-365 82-238 (628)
321 1lns_A X-prolyl dipeptidyl ami 64.9 3.4 0.00012 45.5 3.2 43 479-525 161-212 (763)
322 2ad6_A Methanol dehydrogenase 63.4 74 0.0025 33.3 13.3 27 200-230 311-339 (571)
323 2ism_A Putative oxidoreductase 60.9 1.1E+02 0.0038 29.5 13.3 116 239-364 34-178 (352)
324 2p4o_A Hypothetical protein; p 60.3 1.1E+02 0.0038 28.5 21.6 154 239-409 35-198 (306)
325 3fak_A Esterase/lipase, ESTE5; 59.1 5 0.00017 38.7 3.0 26 497-526 65-90 (322)
326 4ezi_A Uncharacterized protein 58.3 13 0.00044 37.0 5.9 44 481-527 38-85 (377)
327 2vpj_A Kelch-like protein 12; 58.2 1.2E+02 0.0039 28.1 19.6 202 200-409 61-278 (301)
328 3pfb_A Cinnamoyl esterase; alp 57.5 12 0.00042 34.0 5.3 38 485-528 21-58 (270)
329 2wg3_C Hedgehog-interacting pr 57.1 80 0.0028 32.1 11.8 107 193-305 16-158 (463)
330 2p9w_A MAL S 1 allergenic prot 56.8 1.4E+02 0.0049 28.8 16.5 123 187-319 59-216 (334)
331 1kb0_A Quinohemoprotein alcoho 55.2 1.3E+02 0.0046 32.0 13.8 26 201-230 323-350 (677)
332 3s94_A LRP-6, low-density lipo 54.4 2.2E+02 0.0074 30.1 26.1 192 195-409 353-551 (619)
333 2xn4_A Kelch-like protein 2; s 53.2 1.4E+02 0.0048 27.5 22.2 207 246-471 61-283 (302)
334 3pe6_A Monoglyceride lipase; a 52.9 14 0.00046 34.0 4.8 35 490-529 21-55 (303)
335 3c8d_A Enterochelin esterase; 51.4 10 0.00035 38.0 3.9 40 484-525 166-206 (403)
336 1xip_A Nucleoporin NUP159; bet 49.7 1.2E+02 0.0041 30.0 11.4 50 192-248 164-226 (388)
337 3s94_A LRP-6, low-density lipo 48.4 2.7E+02 0.0091 29.3 26.2 154 194-365 395-552 (619)
338 3hju_A Monoglyceride lipase; a 48.3 17 0.00058 34.5 4.8 40 485-529 33-73 (342)
339 3fnb_A Acylaminoacyl peptidase 45.8 19 0.00065 35.7 4.9 39 484-528 133-171 (405)
340 2xn4_A Kelch-like protein 2; s 45.2 1.9E+02 0.0063 26.6 17.3 201 201-409 61-276 (302)
341 1jfr_A Lipase; serine hydrolas 44.6 31 0.0011 31.3 5.9 45 482-529 21-67 (262)
342 4fol_A FGH, S-formylglutathion 44.0 29 0.00098 33.1 5.6 43 484-527 12-60 (299)
343 2g8s_A Glucose/sorbosone dehyd 42.4 2.4E+02 0.0081 27.1 19.1 157 239-405 21-227 (353)
344 4e15_A Kynurenine formamidase; 42.4 24 0.00083 33.1 4.8 36 486-527 58-93 (303)
345 2p9w_A MAL S 1 allergenic prot 42.2 2.4E+02 0.0084 27.1 22.2 153 196-365 18-216 (334)
346 2pbl_A Putative esterase/lipas 41.9 24 0.0008 32.1 4.5 34 488-526 40-73 (262)
347 4a9v_A PHOX; hydrolase, beta-p 40.8 1.1E+02 0.0037 32.1 9.6 64 239-305 479-551 (592)
348 1q7f_A NHL, brain tumor CG1071 39.6 2.1E+02 0.0072 25.7 28.3 197 191-413 30-240 (286)
349 4f0j_A Probable hydrolytic enz 39.6 39 0.0013 31.0 5.8 42 484-529 18-59 (315)
350 1kb0_A Quinohemoprotein alcoho 39.1 3.8E+02 0.013 28.4 17.8 70 338-414 126-203 (677)
351 3a9g_A Putative uncharacterize 38.9 2.7E+02 0.0093 26.7 14.9 77 193-269 75-177 (354)
352 1q7f_A NHL, brain tumor CG1071 38.8 2.2E+02 0.0075 25.6 22.8 193 192-408 78-279 (286)
353 2woz_A Kelch repeat and BTB do 37.5 2.5E+02 0.0087 26.0 19.2 98 308-409 126-231 (318)
354 2zwa_A Leucine carboxyl methyl 36.5 3.4E+02 0.012 28.9 13.4 112 294-409 396-522 (695)
355 1zgk_A Kelch-like ECH-associat 36.1 2.6E+02 0.009 25.7 15.7 184 218-409 91-287 (308)
356 4asc_A Kelch repeat and BTB do 36.1 2.6E+02 0.0091 25.8 22.8 99 307-409 115-221 (315)
357 3qqz_A Putative uncharacterize 35.4 2.6E+02 0.0091 25.6 14.2 109 289-406 31-150 (255)
358 1llf_A Lipase 3; candida cylin 35.4 22 0.00074 37.2 3.4 31 493-526 94-124 (534)
359 3zwu_A Alkaline phosphatase PH 35.1 95 0.0032 32.7 8.2 66 189-255 474-551 (592)
360 3amr_A 3-phytase; beta-propell 34.4 3.3E+02 0.011 26.4 16.4 155 201-359 82-260 (355)
361 1thg_A Lipase; hydrolase(carbo 33.7 25 0.00084 36.8 3.5 31 493-526 102-132 (544)
362 1ukc_A ESTA, esterase; fungi, 33.6 25 0.00086 36.6 3.5 31 493-526 82-112 (522)
363 2y6u_A Peroxisomal membrane pr 33.1 24 0.00083 34.3 3.2 39 490-529 24-65 (398)
364 3gff_A IROE-like serine hydrol 33.1 23 0.0008 34.3 3.0 42 484-526 10-53 (331)
365 2h7c_A Liver carboxylesterase 30.8 29 0.00099 36.3 3.4 31 493-526 95-125 (542)
366 3k2i_A Acyl-coenzyme A thioest 29.2 36 0.0012 33.9 3.7 28 497-528 143-170 (422)
367 3hlk_A Acyl-coenzyme A thioest 28.7 37 0.0013 34.2 3.8 29 495-528 158-186 (446)
368 3sre_A PON1, serum paraoxonase 28.4 4.1E+02 0.014 25.7 21.9 113 240-363 116-251 (355)
369 3sre_A PON1, serum paraoxonase 27.6 4.2E+02 0.015 25.6 25.8 111 200-318 123-252 (355)
370 2xzh_A Clathrin heavy chain 1; 25.3 4.8E+02 0.016 25.4 27.5 198 195-412 71-292 (365)
371 1kv9_A Type II quinohemoprotei 24.5 6.3E+02 0.021 26.6 12.8 116 339-471 65-194 (668)
372 1k3i_A Galactose oxidase precu 24.2 5.4E+02 0.018 26.9 12.2 125 195-325 190-329 (656)
373 2ha2_A ACHE, acetylcholinester 23.6 52 0.0018 34.3 3.8 30 493-526 93-122 (543)
374 4asc_A Kelch repeat and BTB do 23.4 4.3E+02 0.015 24.2 21.7 204 198-409 42-277 (315)
375 3zwu_A Alkaline phosphatase PH 22.7 3.3E+02 0.011 28.6 9.7 64 239-305 479-551 (592)
376 3k6k_A Esterase/lipase; alpha/ 21.7 92 0.0032 29.4 5.0 35 482-526 56-90 (322)
377 3k6d_A T-cadherin; cell adhesi 21.2 1.7E+02 0.0057 22.3 5.5 53 438-497 28-83 (99)
378 2ogt_A Thermostable carboxyles 20.8 72 0.0024 32.8 4.1 30 492-526 80-109 (498)
379 2fx5_A Lipase; alpha-beta hydr 20.5 96 0.0033 27.9 4.7 27 501-528 34-61 (258)
380 1w6s_A Methanol dehydrogenase 20.2 7.4E+02 0.025 25.7 13.9 136 200-347 318-533 (599)
No 1
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=8.1e-71 Score=613.08 Aligned_cols=448 Identities=23% Similarity=0.422 Sum_probs=395.5
Q ss_pred CCCCCCCcccceEEeecCceeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHhhcccCCCCCCce
Q 009441 49 LPSPPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPF 128 (534)
Q Consensus 49 ~~~~P~a~~~~~~~~~hG~~~~DpY~WLed~~~~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~ 128 (534)
.+.||+|+|+|+++++||+++.|||+||||.+ +|+|++||++||+||+++|+++ +++++|++||++++.+++.++|.
T Consensus 9 ~~~~p~~~~~~~~~~~~g~~~~d~y~wl~~~~--~~~~~~~~~~~n~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~p~ 85 (693)
T 3iuj_A 9 RLHYPVTRQGEQVDHYFGQAVADPYRWLEDDR--SPETEAWVKAQNAVTQDYLAQI-PYRAAIKEKLAASWNYAKEGAPF 85 (693)
T ss_dssp -CCCCCCCCCCCEEEETTEEEECTTGGGGCTT--SHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHSCCCEECCCE
T ss_pred CCCCCCCCCCCeEEEeCCccccCCchhhcCCC--CHHHHHHHHHHHHHHHHHHccC-hhHHHHHHHHHHhhccccCCCCE
Confidence 35699999999999999999999999999999 9999999999999999999999 79999999999999999999999
Q ss_pred EeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEECCCCCEEEEE
Q 009441 129 RQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYA 208 (534)
Q Consensus 129 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~ 208 (534)
++|+|+||.++.++++|+++||+... +++++|||+|+++++ +++.++++.|||||++|||+
T Consensus 86 ~~g~~~y~~~~~~~~~~~~~~r~~~~------------------~~~~vllD~n~la~~-~~~~l~~~~~SpDg~~lAy~ 146 (693)
T 3iuj_A 86 REGRYHYFFKNDGLQNQNVLWRQQEG------------------KPAEVFLDPNTLSPD-GTTALDQLSFSRDGRILAYS 146 (693)
T ss_dssp EETTEEEEEEECSSCSSCEEEEECTT------------------SCCEEEECGGGGSTT-SCCEEEEEEECTTSSEEEEE
T ss_pred EECCEEEEEEEcCCCceeEEEEeCCC------------------CCcEEEEehhhccCC-CcEEEEEEEECCCCCEEEEE
Confidence 99999999999999999999997532 467999999999986 77899999999999999999
Q ss_pred EcCCCCeEEEEEEEECCCCCeeccccCCc-cceeEEccCC-eEEEEEECCC--------CCCceEEEeecCCCCCCceEe
Q 009441 209 EDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYITMDEI--------LRPDKAWLHKLEADQSNDICL 278 (534)
Q Consensus 209 ~d~~G~E~~~l~v~dl~tg~~~~~~i~~~-~~~~~Ws~Dg-~l~Y~~~d~~--------~r~~~v~~~~lgt~~~~d~lv 278 (534)
.+.+|+|+++|+|+|+++|+.+.+.++++ .++++|+ || +|||++.+.. .++.+||+|++|+++.++++|
T Consensus 147 ~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v 225 (693)
T 3iuj_A 147 LSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLV 225 (693)
T ss_dssp EECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEE
T ss_pred EecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEE
Confidence 99999999999999999999887777776 5679999 99 9999998754 678999999999998889999
Q ss_pred eeecC--CceEEEEEEcCCCcEEEEEecCcc-eeEEEEEeCCCCC-ceeEeeecccceeEEEeeeCCEEEEEEcCCCCCc
Q 009441 279 YHEKD--DIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFN 354 (534)
Q Consensus 279 ~~e~d--~~~~v~~~~S~Dg~~l~i~~~~~~-~~ev~~~d~~~~~-~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~~ 354 (534)
|++.+ +.+++++.+|+||++|++.+.+.. .+++|+++++++. .++.+..+.++..+.++++|++|||+||. ++++
T Consensus 226 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~-~~~~ 304 (693)
T 3iuj_A 226 FGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNR-DAPN 304 (693)
T ss_dssp ESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECT-TCTT
T ss_pred EecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECC-CCCC
Confidence 98765 567788999999999999876544 4699999998775 57888877666556688999999999997 6789
Q ss_pred cEEEEEeCCCCCCceE--EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeE
Q 009441 355 SELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 432 (534)
Q Consensus 355 ~~L~~~~~~~~~~~~~--li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i 432 (534)
++|++++++++...+| ++++.++. + ++..++++|++..+++|.++|++++++ |.. .+.+.+|+.+ .+
T Consensus 305 ~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g~~~l~~~d~~--g~~------~~~l~~p~~~-~~ 373 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDATARVEQFDYE--GKR------VREVALPGLG-SV 373 (693)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETTEEEEEEECTT--SCE------EEEECCSSSS-EE
T ss_pred CEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECCeeEEEEEECC--CCe------eEEeecCCCc-eE
Confidence 9999999987765567 78877664 6 899999999999999999999999988 442 2467777654 34
Q ss_pred eCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCCceecEEEEEeCCCCCC
Q 009441 433 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKL 512 (534)
Q Consensus 433 ~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~ 512 (534)
..++.+++++.+++.++|+++|+++|.||+++++.++++..+. .+++..+++++++++++||++||++|++|++. +.
T Consensus 374 ~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~--~~~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~-~~ 450 (693)
T 3iuj_A 374 SGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAA--PFKPEDYVSEQRFYQSKDGTRVPLIISYRKGL-KL 450 (693)
T ss_dssp EECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCS--SCCGGGEEEEEEEEECTTSCEEEEEEEEESSC-CC
T ss_pred EeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCC--CcChhhCeeEEEEEecCCCcEEEEEEEecCCC-CC
Confidence 4455567889999999999999999999999999888887554 58888999999999999999999999999998 77
Q ss_pred CCCCcEEEEEcCCCCcCcccCC
Q 009441 513 DGSDPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 513 ~~~~P~lL~gYGgyg~~~~p~f 534 (534)
+++.|+|||+|||||.+..|.|
T Consensus 451 ~~~~P~ll~~hGg~~~~~~~~~ 472 (693)
T 3iuj_A 451 DGSNPTILYGYGGFDVSLTPSF 472 (693)
T ss_dssp SSCCCEEEECCCCTTCCCCCCC
T ss_pred CCCccEEEEECCCCCcCCCCcc
Confidence 8999999999999999998876
No 2
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=1e-69 Score=608.51 Aligned_cols=460 Identities=33% Similarity=0.591 Sum_probs=400.2
Q ss_pred CCCCCCCcccceEEeecC---------------ceeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChHhHHHHHH
Q 009441 49 LPSPPVAKKVEHKMELFG---------------DVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFA 113 (534)
Q Consensus 49 ~~~~P~a~~~~~~~~~hG---------------~~~~DpY~WLed~~~~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~ 113 (534)
.+.||+|+|+|++++ || +++.|||+||||.+|+||||++||++||+||+++|++++++|++|++
T Consensus 30 ~~~~p~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~y~wl~d~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~l~~ 108 (751)
T 2xe4_A 30 SAQPPIAAKKPHRVT-LGYVEGEDRGPNPMNPPRYREDPYFWMRDDDRKDPAVIEHLNKEKVYFQARSADIAQLRDDIYA 108 (751)
T ss_dssp CCCCCCCCCCCCEEE-ESCCTTSCCCSSCCSSCEEEECTTGGGCCTTSCCHHHHHHHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCeeec-CCCcccccccccccCCCeEEeeCCccccCCCCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 366999999999999 99 99999999999988889999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCceEeCCEEEEEEecCCceEEEEEEEec---CCCCCCCCccccCCCCCCCC--CceEEeecchhcCCC
Q 009441 114 ELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLI---HNNEAPPSVHDTMETGPDAP--PEHLILDENVKAEGR 188 (534)
Q Consensus 114 e~~~~~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~---~~~~~~~~~~~~~~~~~~~~--~eevllD~n~~a~~~ 188 (534)
||++++.+++.++|.++|+|+||.++.+|++|+++||++. .+ + ++++|||+|++++++
T Consensus 109 e~~~~~~~~~~~~p~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~-----------------~~~~~~vlld~n~~a~~~ 171 (751)
T 2xe4_A 109 EHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDKEPG-----------------DVAAEEVIIDVNQVAEGK 171 (751)
T ss_dssp HHHHTSCSSEECCCEEETTEEEEEEECTTCCSCEEEEEETTSCTT-----------------CTTTCEEEEEHHHHTTTC
T ss_pred HHHHhcccccCCCCeEECCEEEEEEECCCCceeEEEEEcCCCCCC-----------------CCcCCEEEechhHhccCC
Confidence 9999999999999999999999999999999999999875 22 3 579999999999988
Q ss_pred CcEEEEEEEEC-CCCCEEEEEEcCCCCeEEEEEEEECCCC-CeeccccCCccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 189 GFYSVGCFQVS-PDNKLVAYAEDTKGDEIYTVYVIDIETG-TPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 189 ~~~~l~~~~~S-PDG~~LA~~~d~~G~E~~~l~v~dl~tg-~~~~~~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
+|+.++.++|| |||++|||+.+.+|+|+++|+++|+++| +.+.+.+++..++++|+||| +|+|++.+...++.+||+
T Consensus 172 ~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 172 AFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp SCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred CeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 99999999999 9999999999999999999999999999 86665566666679999999 999999887777789999
Q ss_pred eecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ce--eEeeecccceeEEEe-eeCC
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL--RVLTPRVVGVDTAAS-HRGN 341 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~--~~l~~~~~g~~~~v~-~~g~ 341 (534)
|++|+++.+++++|++.++.|.+++.+|+||++|++.+.+..+++||+++++++. ++ +.+.++..+..+.++ +.|+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 9999987778899998777788889999999999999877778999999998764 46 778887767777777 7799
Q ss_pred EEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEEC-------CCCCCc
Q 009441 342 HFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL-------PAVGEP 413 (534)
Q Consensus 342 ~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l-------~~~g~~ 413 (534)
.||++||.+++++++|+++++++++.... ++++.++..+.++.+++++|++.++++|..+|+++++ +. |+.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~-g~~ 410 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKA-GTG 410 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCT-TTC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccC-Ccc
Confidence 99999997337899999999875422233 6888888788999999999999999999999999997 32 220
Q ss_pred ccccCCCceeeecCceeeEeC-CCC--ccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEE
Q 009441 414 LKSLQGGKSVEFIDPVYSIDP-SES--VFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKW 490 (534)
Q Consensus 414 ~~~~~~~~~i~lp~~~~~i~~-~~~--~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~ 490 (534)
.+.|.+|+.++++.. .+. +++++.+++.++|+++|+++|.+|+.+++.++++..++++.++...+.+++++
T Consensus 411 ------~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 484 (751)
T 2xe4_A 411 ------LREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAANYKVERRF 484 (751)
T ss_dssp ------CEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCGGGEEEEEEE
T ss_pred ------ceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCccceEEEEEE
Confidence 135667765543332 233 45778899999999999999999999999888887655336888889999999
Q ss_pred EEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcCcccCC
Q 009441 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 491 ~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~~~p~f 534 (534)
++|.||++||++|++|++. +.++++|+||++|||++.++.|.|
T Consensus 485 ~~s~dG~~i~~~l~~p~~~-~~~~~~P~vl~~HGg~~~~~~~~~ 527 (751)
T 2xe4_A 485 ATAPDQTKIPLSVVYHKDL-DMSQPQPCMLYGYGSYGLSMDPQF 527 (751)
T ss_dssp EECTTCCEEEEEEEEETTS-CTTSCCCEEEECCCCTTCCCCCCC
T ss_pred EECCCCcEEEEEEEcCCCC-CCCCCccEEEEECCCCCcCCCCcc
Confidence 9999999999999999998 778899999999999999988765
No 3
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=4.2e-64 Score=559.43 Aligned_cols=448 Identities=23% Similarity=0.337 Sum_probs=386.6
Q ss_pred CCCCCcccceEEeecCceeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHhhcccCCCCCCceEe
Q 009441 51 SPPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQ 130 (534)
Q Consensus 51 ~~P~a~~~~~~~~~hG~~~~DpY~WLed~~~~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~~~ 130 (534)
.||+|+|+|+++++||+++.|||+||||.+ +|+|++||++||+||+++|+++ +++++|++||++++..++.+.|.++
T Consensus 2 ~~p~~~~~~~~~~~~g~~~~d~y~wl~~~~--~~~~~~~~~~en~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~~d 78 (695)
T 2bkl_A 2 SYPATRAEQVVDTLHGVQVADPYRWLEDEK--APEVQTWMTAQNAHAREALAKF-PGREALAARFKELFYTDSVSTPSRR 78 (695)
T ss_dssp CCSCCCCCCCEEEETTEEEECTTGGGGCTT--SHHHHHHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHSCCEECCCEEE
T ss_pred CCCCCCCCCeeeeeCCcEEecCChHhcCCC--CHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHhhccccCCCCEEE
Confidence 489999999999999999999999999998 9999999999999999999999 8999999999999999999999999
Q ss_pred CCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEECCCCCEEEEEEc
Q 009441 131 GSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAED 210 (534)
Q Consensus 131 g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~~d 210 (534)
|+|+||.++.++++++++||+...+ +++++|+|+|++++++ ...+..++|||||++|||+.+
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~l~d~~~~a~~~-~~~~~~~~~SPDG~~la~~~~ 140 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGES-----------------GQEKVLLDPNGWSKDG-TVSLGTWAVSWDGKKVAFAQK 140 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTT-----------------SCCEEEECGGGSSSSS-CEEEEEEEECTTSSEEEEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCC-----------------CCcEEEEchHHhccCC-CEEEEEEEECCCCCEEEEEEC
Confidence 9999999999999999999987543 4679999999999764 478999999999999999999
Q ss_pred CCCCeEEEEEEEECCCCCee-ccccCCc-cceeEEccCC-eEEEEEECCC--------CCCceEEEeecCCCCCCceEee
Q 009441 211 TKGDEIYTVYVIDIETGTPV-GKPLVGV-TASVEWAGNE-ALVYITMDEI--------LRPDKAWLHKLEADQSNDICLY 279 (534)
Q Consensus 211 ~~G~E~~~l~v~dl~tg~~~-~~~i~~~-~~~~~Ws~Dg-~l~Y~~~d~~--------~r~~~v~~~~lgt~~~~d~lv~ 279 (534)
.+|+|+++|+|+|+++|+.+ .+.++++ +..++|+||| .|+|++.+.. .++.+||+|++|+++.++++++
T Consensus 141 ~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 141 PNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp ETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred CCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 99999999999999999987 5556665 3679999999 9999987654 4577899999999877788999
Q ss_pred eecCC-ceEEEEEEcCCCcEEEEEecCc-ceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCCCCCccEE
Q 009441 280 HEKDD-IYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSEL 357 (534)
Q Consensus 280 ~e~d~-~~~v~~~~S~Dg~~l~i~~~~~-~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~~~~L 357 (534)
++.+. .+...+.+|+||++|++.+... .+++||+++..++. ++.+..+..+..+.+.++|+ ||+.++. ++++++|
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~-l~~~s~~-~~~~~~l 297 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDR-FYVLTDE-GAPRQRV 297 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEETTE-EEEEECT-TCTTCEE
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEecCCc-EEEEECC-CCCCCEE
Confidence 87554 4677889999999999988665 67899999775553 77787776666666668888 9999997 5789999
Q ss_pred EEEeCCCCCCceE--EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCC
Q 009441 358 LACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 435 (534)
Q Consensus 358 ~~~~~~~~~~~~~--li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~ 435 (534)
++++++++...+| ++++.++..++++.+++++|++...++|..+|++++++ |+.+ +.+.+|+.+ .+..+
T Consensus 298 ~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~--g~~~------~~l~~~~~~-~v~~~ 368 (695)
T 2bkl_A 298 FEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK--GKPV------RTVQLPGVG-AASNL 368 (695)
T ss_dssp EEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT--CCEE------EECCCSSSS-EECCC
T ss_pred EEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC--CCee------EEecCCCCe-EEEEe
Confidence 9999977654445 78877666789999999999999999999999999986 5522 356666444 34444
Q ss_pred CCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCC
Q 009441 436 ESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGS 515 (534)
Q Consensus 436 ~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~ 515 (534)
+.+.+++.++++++|+++|+++|.||+++++.++++..+. .|+.+.+.++++++++.||++||++|++|+++ +.+++
T Consensus 369 ~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~--~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~-~~~~~ 445 (695)
T 2bkl_A 369 MGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDV--PMNPEQYQVEQVFYASKDGTKVPMFVVHRKDL-KRDGN 445 (695)
T ss_dssp BSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCC--SSCGGGEEEEEEEEECTTSCEEEEEEEEETTC-CCSSC
T ss_pred ecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCC--CCCHHHCeEEEEEEECCCCCEEEEEEEECCCC-CCCCC
Confidence 4455788999999999999999999999999888887554 48888899999999999999999999999998 77889
Q ss_pred CcEEEEEcCCCCcCcccCC
Q 009441 516 DPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 516 ~P~lL~gYGgyg~~~~p~f 534 (534)
.|+||++||||+.+..|.|
T Consensus 446 ~p~vl~~hGg~~~~~~~~~ 464 (695)
T 2bkl_A 446 APTLLYGYGGFNVNMEANF 464 (695)
T ss_dssp CCEEEECCCCTTCCCCCCC
T ss_pred ccEEEEECCCCccccCCCc
Confidence 9999999999999998765
No 4
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=1.9e-63 Score=555.54 Aligned_cols=452 Identities=20% Similarity=0.294 Sum_probs=386.6
Q ss_pred CCCCCCcccc-eEEeecCceeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHhhcccCCCCCCce
Q 009441 50 PSPPVAKKVE-HKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPF 128 (534)
Q Consensus 50 ~~~P~a~~~~-~~~~~hG~~~~DpY~WLed~~~~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~ 128 (534)
+.||+|+|+| +++++||+++.|||+||||.+ +|++++|+++||+|++++|+++ +++++|++||++++..++.+.|.
T Consensus 4 ~~~p~~~~~~~~~~~~~g~~~~d~y~wl~~~~--~~~~~~~~~~en~~~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~ 80 (710)
T 2xdw_A 4 FQYPDVYRDETAIQDYHGHKVCDPYAWLEDPD--SEQTKAFVEAQNKITVPFLEQC-PIRGLYKERMTELYDYPKYSCHF 80 (710)
T ss_dssp SCCCCCCCCTTCEEEETTEEEECTTGGGGCTT--SHHHHHHHHHHHHHHHHHHHHS-THHHHHHHHHHHHHCSCEECCCE
T ss_pred CCCCCCCCCCCeeeeeCCcEEccCChhhcCCC--CHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHhhccccCCCCE
Confidence 4589999999 999999999999999999998 9999999999999999999999 89999999999999999999999
Q ss_pred EeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEECCCCCEEEEE
Q 009441 129 RQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYA 208 (534)
Q Consensus 129 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~ 208 (534)
++|+|+||.++.+++.+.++||+...+ +++++|+|+|+++++ +...+..++|||||++|||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~lld~~~l~~~-~~~~~~~~~~SPDg~~la~~ 142 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLE-----------------GEARVFLDPNILSDD-GTVALRGYAFSEDGEYFAYG 142 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTT-----------------SCCEEEECGGGGCTT-SCEEEEEEEECTTSSEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCC-----------------CCcEEEECHHHhccC-CCEEEEEEEECCCCCEEEEE
Confidence 999999999999999999999987542 467899999999975 45589999999999999999
Q ss_pred EcCCCCeEEEEEEEECCCCCeeccccCCc-cceeEEccCC-eEEEEEECCC-----------CCCceEEEeecCCCCCCc
Q 009441 209 EDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYITMDEI-----------LRPDKAWLHKLEADQSND 275 (534)
Q Consensus 209 ~d~~G~E~~~l~v~dl~tg~~~~~~i~~~-~~~~~Ws~Dg-~l~Y~~~d~~-----------~r~~~v~~~~lgt~~~~d 275 (534)
.+.+|+++++|+|+|+++|+.+.+.+.+. ...++|+||| .|+|++.+.. .++.+||+|++|+++.++
T Consensus 143 ~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 222 (710)
T 2xdw_A 143 LSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED 222 (710)
T ss_dssp EEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC
T ss_pred EcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc
Confidence 99999999999999999999877555543 4569999999 9999987654 557889999999987778
Q ss_pred eEeeeecC-CceEEEEEEcCCCcEEEEEecCcc--eeEEEEEeCCC------CC-ceeEeeecccceeEEEeeeCCEEEE
Q 009441 276 ICLYHEKD-DIYSLGLQASESKKFLFIASESKI--TRFVFYLDVSK------PE-ELRVLTPRVVGVDTAASHRGNHFFI 345 (534)
Q Consensus 276 ~lv~~e~d-~~~~v~~~~S~Dg~~l~i~~~~~~--~~ev~~~d~~~------~~-~~~~l~~~~~g~~~~v~~~g~~lyi 345 (534)
++++++.+ +.+..++.+|+||++|++.+.... .++||++++++ +. .++.+..+..+..+.++++|+.||+
T Consensus 223 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~ 302 (710)
T 2xdw_A 223 ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTF 302 (710)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEE
T ss_pred eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEE
Confidence 89998754 567778899999999999875432 67999999976 43 4777777766666668999999999
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceE--EecCCCCceeeeEEEe-CCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCce
Q 009441 346 TRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLF-IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS 422 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~--li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~ 422 (534)
.++. ++++++|+.++++++....| ++++.++..+.++.++ +++|++...++|..+|+++++.+ |+.+ +.
T Consensus 303 ~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~------~~ 374 (710)
T 2xdw_A 303 KTNR-HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALL------KI 374 (710)
T ss_dssp EECT-TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT-CCEE------EE
T ss_pred EECC-CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEE------Ee
Confidence 9997 67899999999987653345 7787665578999998 78999999999999999999853 5532 35
Q ss_pred eeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCc--EEEEEEccccCCCCCCCcEEEEEEEEcCCCceec
Q 009441 423 VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI--SVLKKIETVLGGFDTNNYFTERKWASASDGTQIP 500 (534)
Q Consensus 423 i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~--~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~~VP 500 (534)
+.++. + .+..++.+.+++.++++++|+++|+++|.||+++++ .++++..++ .+|+.+.+.+++++++|+||++||
T Consensus 375 l~~~~-~-~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~dg~~i~ 451 (710)
T 2xdw_A 375 FPLEV-G-SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTV-KGIDASDYQTVQIFYPSKDGTKIP 451 (710)
T ss_dssp ECCCS-S-EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCC-TTCCGGGEEEEEEEEECTTSCEEE
T ss_pred cCCCC-c-eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeeccc-CCcCccccEEEEEEEEcCCCCEEE
Confidence 66653 2 333333345678999999999999999999999988 778877655 368888999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCcEEEEEcCCCCcCcccCC
Q 009441 501 ICIVYRKNLVKLDGSDPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 501 ~~lv~~k~~~~~~~~~P~lL~gYGgyg~~~~p~f 534 (534)
++|++|++. +.+++.|+||++|||++.+..|.|
T Consensus 452 ~~~~~p~~~-~~~~~~P~vl~~hGg~~~~~~~~~ 484 (710)
T 2xdw_A 452 MFIVHKKGI-KLDGSHPAFLYGYGGFNISITPNY 484 (710)
T ss_dssp EEEEEETTC-CCSSCSCEEEECCCCTTCCCCCCC
T ss_pred EEEEecCCC-CCCCCccEEEEEcCCCCCcCCCcc
Confidence 999999998 778899999999999999988876
No 5
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=2.7e-62 Score=548.66 Aligned_cols=453 Identities=22% Similarity=0.346 Sum_probs=380.2
Q ss_pred CCCCCCCcccceEEeecCceeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHhhcccCCCCCCce
Q 009441 49 LPSPPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPF 128 (534)
Q Consensus 49 ~~~~P~a~~~~~~~~~hG~~~~DpY~WLed~~~~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~ 128 (534)
.+.||+|+|+|+++++||+++.|||+||||..|++|++++|+++||+|++++|+++ +++++|++||++++..++.+.|.
T Consensus 37 ~~~~p~~~~~~~~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~aen~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~p~ 115 (741)
T 1yr2_A 37 LPPYPASPQVPLVEDHFGEKVSDPWRWLEADVRTDAKVAAWVQAQSAYTAAYLKQL-PERAALEKRMKALIDYERFGLPQ 115 (741)
T ss_dssp -CCCCCCCCCCCEEEETTEEEECTTGGGGSCTTTCHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHSCCCEECCCE
T ss_pred cCCCCCCCCCCeeeeeCCcEEccCcHHHhCCCCCCHHHHHHHHHHHHHHHHHHhcC-ccHHHHHHHHHHhhcccccCCCE
Confidence 45689999999999999999999999999995669999999999999999999999 89999999999999999999999
Q ss_pred EeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEECCCCCEEEEE
Q 009441 129 RQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYA 208 (534)
Q Consensus 129 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~ 208 (534)
++|+|+||.++.++++++++||+..... +.+.+++|||+|+++++ +...+..++|||||++|||+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~--------------~~~~~~~lld~~~l~~~-~~~~~~~~~~SPDG~~la~~ 180 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAP--------------VGTKGRVLLDPNTWAKD-GATALDAWAASDDGRLLAYS 180 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSC--------------TTCCCEEEECGGGCC-----EEEEEEEECTTSSEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCcc--------------CCCCCEEEECHHHhccC-CCEEEEeEEECCCCCEEEEE
Confidence 9999999999999999999999875410 01467999999999975 35789999999999999999
Q ss_pred EcCCCCeEEEEEEEECCCCCeeccccCCc-cceeEEccCCeEEEEEECCCC---------CCceEEEeecCCCCCCceEe
Q 009441 209 EDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNEALVYITMDEIL---------RPDKAWLHKLEADQSNDICL 278 (534)
Q Consensus 209 ~d~~G~E~~~l~v~dl~tg~~~~~~i~~~-~~~~~Ws~Dg~l~Y~~~d~~~---------r~~~v~~~~lgt~~~~d~lv 278 (534)
.+.+|+|+++|+|+|+++|+.+.+.+.++ +..++|+||..|+|++.+... ++.+||+|++|+++.+++++
T Consensus 181 ~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv 260 (741)
T 1yr2_A 181 VQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV 260 (741)
T ss_dssp EEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEE
T ss_pred EcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEE
Confidence 99999999999999999999887655554 356999999778888865442 37789999999987778899
Q ss_pred eeecCC-ceEEEEEEcCCCcEEEEEecCc--ceeEEEEEeCCCCC-c-eeEeeecccceeEEEeeeCCEEEEEEcCCCCC
Q 009441 279 YHEKDD-IYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE-E-LRVLTPRVVGVDTAASHRGNHFFITRRSDELF 353 (534)
Q Consensus 279 ~~e~d~-~~~v~~~~S~Dg~~l~i~~~~~--~~~ev~~~d~~~~~-~-~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~ 353 (534)
|++.+. .+..++.+|+||++|++.+... .+++||+++++++. + ++.+.++..+..+.++++|+.||+.++. +++
T Consensus 261 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~-~~~ 339 (741)
T 1yr2_A 261 FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGD-GAP 339 (741)
T ss_dssp ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECT-TCT
T ss_pred eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECC-CCC
Confidence 987653 4677889999999999988654 46799999998764 4 6778777666666678999999999997 678
Q ss_pred ccEEEEEeCCCCCCceE--EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceee
Q 009441 354 NSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS 431 (534)
Q Consensus 354 ~~~L~~~~~~~~~~~~~--li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~ 431 (534)
+++|+.++++++. ..| ++++.++ .+.++.+++++|++...++|..+|++++++ |+.+ +.+.+|+.+.
T Consensus 340 ~~~l~~~d~~~~~-~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~--g~~~------~~l~~~~~~~- 408 (741)
T 1yr2_A 340 LKKIVRVDLSGST-PRFDTVVPESKD-NLESVGIAGNRLFASYIHDAKSQVLAFDLD--GKPA------GAVSLPGIGS- 408 (741)
T ss_dssp TCEEEEEECSSSS-CEEEEEECCCSS-EEEEEEEEBTEEEEEEEETTEEEEEEEETT--SCEE------EECBCSSSCE-
T ss_pred CCEEEEEeCCCCc-cccEEEecCCCC-eEEEEEEECCEEEEEEEECCEEEEEEEeCC--CCce------eeccCCCCeE-
Confidence 9999999987653 356 7777655 588899999999999999999999999986 5522 3566665442
Q ss_pred EeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCCceecEEEEEeCCCCC
Q 009441 432 IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVK 511 (534)
Q Consensus 432 i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~ 511 (534)
+..++.+.+++.++|+++|+++|+++|.||+.+++.++++... ..|+.+.+.++++++++.||++||++|++|++.
T Consensus 409 v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~--~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~-- 484 (741)
T 1yr2_A 409 ASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVH--LTFDPADFRVEQVFYPSKDGTKVPMFIVRRKDA-- 484 (741)
T ss_dssp EEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCC--CSSCGGGEEEEEEEEECTTSCEEEEEEEEETTC--
T ss_pred EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCC--CCCChhHCEEEEEEEEcCCCCEEEEEEEecCCC--
Confidence 3333344577889999999999999999999999987776633 268888999999999999999999999999975
Q ss_pred CCCCCcEEEEEcCCCCcCcccCC
Q 009441 512 LDGSDPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 512 ~~~~~P~lL~gYGgyg~~~~p~f 534 (534)
++++|+||++|||++.+..|.|
T Consensus 485 -~~~~p~vl~~hGg~~~~~~~~~ 506 (741)
T 1yr2_A 485 -KGPLPTLLYGYGGFNVALTPWF 506 (741)
T ss_dssp -CSCCCEEEECCCCTTCCCCCCC
T ss_pred -CCCCcEEEEECCCCCccCCCCc
Confidence 4689999999999999988765
No 6
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=2.6e-57 Score=498.97 Aligned_cols=444 Identities=17% Similarity=0.188 Sum_probs=356.6
Q ss_pred EeecCceeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHhhcccCC-CCCCceEeCCEEEEEEec
Q 009441 62 MELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQE-DVSAPFRQGSYYYYTRTL 140 (534)
Q Consensus 62 ~~~hG~~~~DpY~WLed~~~~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~e~~~~~~~~-~~s~p~~~g~~~y~~~~~ 140 (534)
+.-||+++.|||+||||.+ +|++++|+++||++|.++|++. |.+++|+++|++++..+ +.+.|.+.|+|+|+.+++
T Consensus 13 ~~~~~~~~~Dpy~wLEd~~--~~~~~~wv~aqN~~T~~~l~~~-p~~~~l~~~~~~~~~~~~ri~~p~~~g~~~y~f~~d 89 (711)
T 4hvt_A 13 DNNKQIFNPKETKFLEEAE--GVEALEWAKERTSKTEKALQAM-QEYKQIKKEIETIFYDQRKTPYGVIRKGYVYNFWMD 89 (711)
T ss_dssp -------CHHHHGGGGSSS--SSHHHHHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHTCTTSCCCCEEETTEEEEEECC
T ss_pred cCCCceeeCCCchhhcCCC--CHHHHHHHHHHHHHHHHHHhCC-ccHHHHHHHHHHHhccccccCCcEEECCEEEEEEec
Confidence 4568999999999999999 9999999999999999999998 68999999999999876 689999999999999999
Q ss_pred CCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCc-EEEEEEE-ECCCCCEEEEEEcCCCCeEEE
Q 009441 141 EGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGF-YSVGCFQ-VSPDNKLVAYAEDTKGDEIYT 218 (534)
Q Consensus 141 ~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~-~~l~~~~-~SPDG~~LA~~~d~~G~E~~~ 218 (534)
+.+++.+|.|...++ +. .+.+++|||||+|+|++..|. +.+.++. +||||+++||+++.+|+|+..
T Consensus 90 ~~~~~gl~rrt~~~~-----~~-------~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G~d~~~ 157 (711)
T 4hvt_A 90 DKNPQGLWRRTLVDN-----YS-------KDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQNPNRYLISMSFGGKDEMF 157 (711)
T ss_dssp SSCSSCEEEEEEHHH-----HT-------SSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSSTTEEEEEEEETTCSEEE
T ss_pred CCCCcEEEEEccchh-----cc-------cCCCCcEEEeccccccccCCCcEEEeceeecCCCCCEEEEEeCCCCCceeE
Confidence 999996666544311 00 012568999999999975464 7888888 999999999999999999999
Q ss_pred EEEEECCCCCeeccccC-Cc---------cceeEEccCCeEEEEEE-C-----CCCCCceEEEeecCCCCCCceEeeeec
Q 009441 219 VYVIDIETGTPVGKPLV-GV---------TASVEWAGNEALVYITM-D-----EILRPDKAWLHKLEADQSNDICLYHEK 282 (534)
Q Consensus 219 l~v~dl~tg~~~~~~i~-~~---------~~~~~Ws~Dg~l~Y~~~-d-----~~~r~~~v~~~~lgt~~~~d~lv~~e~ 282 (534)
++++|++||+.+.+.+. .+ ++.++|.++++|||.+. + +.+++++||+|++||++++|++||++.
T Consensus 158 ~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~ 237 (711)
T 4hvt_A 158 FREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVP 237 (711)
T ss_dssp EEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECC
T ss_pred EEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccC
Confidence 99999999999987554 22 24459985558888652 2 246788999999999999999999988
Q ss_pred CCceEEEEEEcCCCcE----EEEEec-CcceeEEEEEeCCCCC-ceeEe-eecccceeEEEeeeCCEEEEEEcCC-----
Q 009441 283 DDIYSLGLQASESKKF----LFIASE-SKITRFVFYLDVSKPE-ELRVL-TPRVVGVDTAASHRGNHFFITRRSD----- 350 (534)
Q Consensus 283 d~~~~v~~~~S~Dg~~----l~i~~~-~~~~~ev~~~d~~~~~-~~~~l-~~~~~g~~~~v~~~g~~lyi~tn~~----- 350 (534)
+..+++++..+.|+++ ++|... +..++++|+++++.+. ++..+ .++..+ .+++.+++||+.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 314 (711)
T 4hvt_A 238 KEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT---LQGSFKEYVFWLLRSDWKFKS 314 (711)
T ss_dssp TTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE---EEEEETTEEEEECSSCEEETT
T ss_pred CCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce---EeeeECCEEEEEECccccccc
Confidence 8888888899999995 566544 5667999999987644 44444 444322 2466789999988542
Q ss_pred -CCCccEEEEEeCCCCC-----CceE--EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCce
Q 009441 351 -ELFNSELLACPVDNTS-----ETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS 422 (534)
Q Consensus 351 -~~~~~~L~~~~~~~~~-----~~~~--li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~ 422 (534)
++++++|++++++++. ..+| +++++++..|+++.+++++|++.+.++|.++|+++++.+ |... .+.
T Consensus 315 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-g~~~-----~~~ 388 (711)
T 4hvt_A 315 HNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLEN-EQWT-----KPV 388 (711)
T ss_dssp EEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEET-TEEC-----CCE
T ss_pred ccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCC-CceE-----EEe
Confidence 2489999999997642 2356 688888889999999999999999999999999998864 4310 134
Q ss_pred -eeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCCceecE
Q 009441 423 -VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPI 501 (534)
Q Consensus 423 -i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~~VP~ 501 (534)
+.+|+.+ ++...+.+.+++.+++.++|+++|+++|.+|++ ++.++++..+ ..+++..+++++++++|.||++||+
T Consensus 389 ~i~lp~~~-~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~--~~~~~~~~~~e~v~~~s~DG~~i~~ 464 (711)
T 4hvt_A 389 VLKLPYQN-AIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKAL--YSFDSENYVLEQKEATSFDGVKIPY 464 (711)
T ss_dssp EECCCSTT-CEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCS--SCCCGGGEEEEEEEEECTTSCEEEE
T ss_pred ccCCCCCe-EEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCC--cccCcccCeeEEEEEECCCCeEEEE
Confidence 7777543 344333446678899999999999999999998 8877777643 3688888999999999999999999
Q ss_pred EEEEeCCCCCCCCCCcEEEEEcCCCCcCcccCC
Q 009441 502 CIVYRKNLVKLDGSDPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 502 ~lv~~k~~~~~~~~~P~lL~gYGgyg~~~~p~f 534 (534)
+|++|++. +.+++.|+||++||||+.+..|.|
T Consensus 465 ~l~~P~~~-~~~~~~P~vl~~HGG~~~~~~~~~ 496 (711)
T 4hvt_A 465 FLVYKKGI-KFDGKNPTLLEAYGGFQVINAPYF 496 (711)
T ss_dssp EEEEETTC-CCSSCCCEEEECCCCTTCCCCCCC
T ss_pred EEEecCCC-CCCCCccEEEEECCCCCCCCCCcc
Confidence 99999998 788999999999999999999876
No 7
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.90 E-value=2.2e-21 Score=213.67 Aligned_cols=314 Identities=13% Similarity=0.006 Sum_probs=210.9
Q ss_pred ECCCCCE-EEEEEcCCCCeEEEEEEEECC--C-CCeecccc------CCccceeEEccCC-eEEEEEECCC-----CCCc
Q 009441 198 VSPDNKL-VAYAEDTKGDEIYTVYVIDIE--T-GTPVGKPL------VGVTASVEWAGNE-ALVYITMDEI-----LRPD 261 (534)
Q Consensus 198 ~SPDG~~-LA~~~d~~G~E~~~l~v~dl~--t-g~~~~~~i------~~~~~~~~Ws~Dg-~l~Y~~~d~~-----~r~~ 261 (534)
.||||++ |||+.+.. .+|+++++. + |+.....- ......++|+||| .|+|++.+.. ....
T Consensus 86 ~SPDg~~~la~~~~~~----~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 86 PRPAGGPLLVFTHFGD----QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp CCSSSSCEEEEEBTTT----CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred eecCCCeEEEEEECCC----CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 3599999 99987652 469999987 4 66443211 1124568999999 8999886521 2235
Q ss_pred eEEEeecCCCC----CCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-----ceeEEEEEeCC-CCC--ceeEeeecc
Q 009441 262 KAWLHKLEADQ----SNDICLYHEKDDIYSLGLQASESKKFLFIASESK-----ITRFVFYLDVS-KPE--ELRVLTPRV 329 (534)
Q Consensus 262 ~v~~~~lgt~~----~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-----~~~ev~~~d~~-~~~--~~~~l~~~~ 329 (534)
+||.+++.+.. .+.+.+.+ ....+...+.+||||++|++.+... ..++||+++++ ++. ..+.+....
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSD-DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSC-SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred EEEEEECCCCccccCCceeEEEe-cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 89999997621 12344441 1234555688999999999877543 34789999998 452 255555542
Q ss_pred cceeE--EEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCc-------eeeeEEEe-CCEEEEEEeeCCe
Q 009441 330 VGVDT--AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV-------KLQDIQLF-IDHLAVYEREGGL 399 (534)
Q Consensus 330 ~g~~~--~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~-------~l~~~~~~-~~~lv~~~~~~g~ 399 (534)
.+..+ .++++|. +|+.++.+ ...+|+++++++... ..+.+...+. .+..+.+. ++.+++.... +.
T Consensus 241 ~~~~~~~~~spdg~-l~~~~~~~--~~~~l~~~~~~~~~~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 241 EEAIAQAEWAPDGS-LIVATDRT--GWWNLHRVDPATGAA-TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp TBCEEEEEECTTSC-EEEEECTT--SSCEEEEECTTTCCE-EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred CceEcceEECCCCe-EEEEECCC--CCeEEEEEECCCCce-eecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence 23232 3677777 88888763 356899998754321 1133322111 13456665 4678888888 88
Q ss_pred eEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCC
Q 009441 400 QKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGF 479 (534)
Q Consensus 400 ~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~ 479 (534)
.+|++++++. |+ + +.+..+.. .+..+. +++++.+++..+|...|.++|.+|+++++.+.++.... ..+
T Consensus 316 ~~l~~~d~~~-~~-~------~~l~~~~~--~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-~~~ 383 (662)
T 3azo_A 316 AVLGILDPES-GE-L------VDAAGPWT--EWAATL-TVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHT-DPV 383 (662)
T ss_dssp CEEEEEETTT-TE-E------EECCSSCC--EEEEEE-EEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCC-CSS
T ss_pred cEEEEEECCC-Cc-E------EEecCCCC--eEEEEE-ecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCc-ccC
Confidence 9999999873 33 2 23333221 222220 34677899999999999999999999999887765332 234
Q ss_pred CCCCc-EEEEEEEEcCCCceecEEEEEeCCCCC----CCCCCcEEEEEcCCCCcCcccCC
Q 009441 480 DTNNY-FTERKWASASDGTQIPICIVYRKNLVK----LDGSDPLLLYGYGSYEVIFFFLF 534 (534)
Q Consensus 480 d~~~~-~~e~v~~~S~DG~~VP~~lv~~k~~~~----~~~~~P~lL~gYGgyg~~~~p~f 534 (534)
+...+ ..+.+++++.||.+|++++++|++. + .+++.|+||++||+++....+.|
T Consensus 384 ~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~-~~~~~~~~~~p~vv~~HG~~~~~~~~~~ 442 (662)
T 3azo_A 384 DPAYYPEPQIRTFTAPDGREIHAHIYPPHSP-DFTGPADELPPYVVMAHGGPTSRVPAVL 442 (662)
T ss_dssp CGGGSCCCEEEEEECTTSCEEEEEEECCCCS-SEECCTTCCCCEEEEECSSSSSCCCCSC
T ss_pred CccccCcceEEEEEcCCCCEEEEEEECCCCc-cccCCCCCCccEEEEECCCCCccCcccc
Confidence 44444 4789999999999999999999986 5 46789999999999987765443
No 8
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=6.4e-17 Score=180.21 Aligned_cols=308 Identities=14% Similarity=0.137 Sum_probs=199.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCc------------------cceeEEccCC-eEEEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV------------------TASVEWAGNE-ALVYIT 253 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~------------------~~~~~Ws~Dg-~l~Y~~ 253 (534)
+..+.|||||++|||+.+. +|+++|+++|+.......+. ...++|+||| .|+|.+
T Consensus 154 ~~~~~~SPDG~~la~~~~~------~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 154 ATDAKLSPKGGFVSFIRGR------NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EEEEEECTTSSEEEEEETT------EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred cccccCCCCCCEEEEEeCC------cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 6678999999999999752 79999999987654211111 2458999999 899987
Q ss_pred ECCCCC----------------------------CceEEEeecCC-CCCCceEeeee-cCCceEEEEEEcCCCcEEEEEe
Q 009441 254 MDEILR----------------------------PDKAWLHKLEA-DQSNDICLYHE-KDDIYSLGLQASESKKFLFIAS 303 (534)
Q Consensus 254 ~d~~~r----------------------------~~~v~~~~lgt-~~~~d~lv~~e-~d~~~~v~~~~S~Dg~~l~i~~ 303 (534)
.+.... ..+||.+++.+ +. ...+... ........+.+ |||++|++..
T Consensus 228 ~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 228 IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ--TQWIDLGKEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC--CEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc--eEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence 654211 12678888766 53 2223221 12334456889 9999998876
Q ss_pred cC--cceeEEEEEeCCCCCceeEeeecccc------eeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC
Q 009441 304 ES--KITRFVFYLDVSKPEELRVLTPRVVG------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR 375 (534)
Q Consensus 304 ~~--~~~~ev~~~d~~~~~~~~~l~~~~~g------~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~ 375 (534)
.+ .....|+++++.++. .+.+...... ....++++|. +++.++.+ ...+|+.+++... .. .+...
T Consensus 305 ~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~--g~~~l~~~~~~~~--~~-~l~~~ 377 (741)
T 2ecf_A 305 QSRDQKKLDLVEVTLASNQ-QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT--GFQHLYRIDSKGK--AA-ALTHG 377 (741)
T ss_dssp EETTSSEEEEEEEETTTCC-EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT--SSCEEEEECSSSC--EE-ESCCS
T ss_pred ecccCCeEEEEEEECCCCc-eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC--CccEEEEEcCCCC--ee-eeeec
Confidence 42 345789999998875 4444433221 1233677777 66666643 3468888886532 11 23222
Q ss_pred CCceeeeEE-Ee--CCEEEEEEeeCC--eeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEecc
Q 009441 376 ESVKLQDIQ-LF--IDHLAVYEREGG--LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 450 (534)
Q Consensus 376 ~~~~l~~~~-~~--~~~lv~~~~~~g--~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS 450 (534)
.. .+..+. +. ++.|++....++ ..+|+.++++ |..+ +.+.-...... ...+.+++.+.+.+++
T Consensus 378 ~~-~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~--g~~~------~~l~~~~~~~~---~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 378 NW-SVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ--GGQP------QRLSKAPGMHS---ASFARNASVYVDSWSN 445 (741)
T ss_dssp SS-CEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT--CCCC------EECCCSCSEEE---EEECTTSSEEEEEEEE
T ss_pred ce-EEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC--CCCe------eecccCCCceE---EEECCCCCEEEEEecC
Confidence 22 354543 44 357888887776 5678877765 4422 22222111111 2234578899999999
Q ss_pred CCCCCeEEEEECCCCcEEEEEEccc-cC--CCCCC--Cc-EEEEEEEEcCCC-ceecEEEEEeCCCCCCCCCCcEEEEEc
Q 009441 451 LRTPPSVYDYDMDMGISVLKKIETV-LG--GFDTN--NY-FTERKWASASDG-TQIPICIVYRKNLVKLDGSDPLLLYGY 523 (534)
Q Consensus 451 ~~~P~~~y~~d~~~~~~~~~~~~~~-~~--~~d~~--~~-~~e~v~~~S~DG-~~VP~~lv~~k~~~~~~~~~P~lL~gY 523 (534)
+.+|+++|.+|..+++.+.+..... .. .++.. .+ ..+.+.+++.|| .+|+++++.|++. +..++.|+||++|
T Consensus 446 ~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~-~~~~~~p~vv~~h 524 (741)
T 2ecf_A 446 NSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGF-DPAKRYPVAVYVY 524 (741)
T ss_dssp TTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSC-CTTSCEEEEEECC
T ss_pred CCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCC-CCCCCcCEEEEEc
Confidence 9999999999987665444432111 00 11111 33 689999999999 9999999999987 6667899999999
Q ss_pred CCCCcC
Q 009441 524 GSYEVI 529 (534)
Q Consensus 524 Ggyg~~ 529 (534)
|+.+..
T Consensus 525 G~~~~~ 530 (741)
T 2ecf_A 525 GGPASQ 530 (741)
T ss_dssp CSTTCC
T ss_pred CCCCcc
Confidence 998875
No 9
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=1.3e-16 Score=178.23 Aligned_cols=316 Identities=13% Similarity=0.082 Sum_probs=195.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--------------------ccceeEEccCC-eEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--------------------VTASVEWAGNE-ALVY 251 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--------------------~~~~~~Ws~Dg-~l~Y 251 (534)
+..+.|||||++|||+.+ ..|+++|+++|+.......+ ....+.||||| .|+|
T Consensus 114 ~~~~~~SPdG~~la~~~~------~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~ 187 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYVWN------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAY 187 (740)
T ss_dssp EEEEEECSSTTCEEEEET------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEE
T ss_pred ceeeEECCCCCEEEEEEC------CeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEE
Confidence 567899999999999965 26999999998765422111 11248899999 8999
Q ss_pred EEECCCCC---------------C----------------ceEEEeecCC---CCC-CceEeeee----cCCceEEEEEE
Q 009441 252 ITMDEILR---------------P----------------DKAWLHKLEA---DQS-NDICLYHE----KDDIYSLGLQA 292 (534)
Q Consensus 252 ~~~d~~~r---------------~----------------~~v~~~~lgt---~~~-~d~lv~~e----~d~~~~v~~~~ 292 (534)
.+.|++.- + .+|+.+++.+ +.. ....+-.. ....+...+.|
T Consensus 188 ~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w 267 (740)
T 4a5s_A 188 AQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTW 267 (740)
T ss_dssp EEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE
T ss_pred EEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEE
Confidence 98654310 0 1567777765 411 11112110 12345557899
Q ss_pred cCCCcEEEEEecC-cceeEEEEEeCCCCC-c-----eeEe-eecccc-e------eEEEeeeCCEEE-EEEcCCCCCccE
Q 009441 293 SESKKFLFIASES-KITRFVFYLDVSKPE-E-----LRVL-TPRVVG-V------DTAASHRGNHFF-ITRRSDELFNSE 356 (534)
Q Consensus 293 S~Dg~~l~i~~~~-~~~~ev~~~d~~~~~-~-----~~~l-~~~~~g-~------~~~v~~~g~~ly-i~tn~~~~~~~~ 356 (534)
||||+.+++..+. .....|+++++++++ . ...+ .....+ + ...++++|..++ +.+..+ ....
T Consensus 268 spdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~--G~~~ 345 (740)
T 4a5s_A 268 ATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE--GYRH 345 (740)
T ss_dssp EETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT--SCEE
T ss_pred eCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC--CceE
Confidence 9999977766654 345689999987653 1 1222 121111 1 123678899887 666543 3578
Q ss_pred EEEEeCCCCCCceEEecCCCCceeeeEE-EeCCEEEEEEee----CCeeEEEEEECCCCCCcccccCCCceeeec--Cce
Q 009441 357 LLACPVDNTSETTVLIPHRESVKLQDIQ-LFIDHLAVYERE----GGLQKITTYRLPAVGEPLKSLQGGKSVEFI--DPV 429 (534)
Q Consensus 357 L~~~~~~~~~~~~~li~~~~~~~l~~~~-~~~~~lv~~~~~----~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp--~~~ 429 (534)
|+.++++.... .. +..... .+..+. +.++.|++.... .+..+|+.++++ |.... ..+... ...
T Consensus 346 l~~~~~~~~~~-~~-lT~g~~-~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~--g~~~~-----~~lt~~~~~~~ 415 (740)
T 4a5s_A 346 ICYFQIDKKDC-TF-ITKGTW-EVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLI--DYTKV-----TCLSCELNPER 415 (740)
T ss_dssp EEEEETTCSSC-EE-SCCSSS-CEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETT--EEEEE-----EESSTTTSTTT
T ss_pred EEEEECCCCce-Ee-cccCCE-EEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECC--CCCcc-----eeeccccCCCC
Confidence 99998865332 22 222222 133332 346788888876 456789999987 43110 012110 000
Q ss_pred eeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEE-ccc-cCCCCCCCc-EEEEEEEEcCCCceecEEEEEe
Q 009441 430 YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKI-ETV-LGGFDTNNY-FTERKWASASDGTQIPICIVYR 506 (534)
Q Consensus 430 ~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~-~~~-~~~~d~~~~-~~e~v~~~S~DG~~VP~~lv~~ 506 (534)
........+.++..+.+.++++. |+.++.++.++++...+.. .+. ...++...+ .++.+.+ +.||++|+++++.|
T Consensus 416 ~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P 493 (740)
T 4a5s_A 416 CQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILP 493 (740)
T ss_dssp BCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEEC
T ss_pred CceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeC
Confidence 01111223456778999999988 8899999998887544332 111 011222223 3566666 78999999999999
Q ss_pred CCCCCCCCCCcEEEEEcCCCCcC
Q 009441 507 KNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 507 k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
+++ +..++.|+||++|||++..
T Consensus 494 ~~~-~~~~~~P~vv~~HGg~~~~ 515 (740)
T 4a5s_A 494 PHF-DKSKKYPLLLDVYAGPCSQ 515 (740)
T ss_dssp TTC-CTTSCEEEEEECCCCTTCC
T ss_pred CCC-CCCCCccEEEEECCCCccc
Confidence 998 7788999999999998874
No 10
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.78 E-value=5e-16 Score=172.12 Aligned_cols=309 Identities=14% Similarity=0.147 Sum_probs=196.6
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC-----CCeeccccCC---c-------------cceeEEccCC-eEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-----GTPVGKPLVG---V-------------TASVEWAGNE-ALV 250 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t-----g~~~~~~i~~---~-------------~~~~~Ws~Dg-~l~ 250 (534)
+..+.|||||++|||+.+ .+|+++|+++ |+.......+ + ...+.|+||| .|+
T Consensus 123 ~~~~~~SpdG~~la~~~~------~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 123 TASLDFSPVGDRVAYVRN------HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp CTTCEECTTSSEEEEEET------TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred ccCCcCCCCCCEEEEEEC------CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 445789999999999744 3799999998 8765421111 1 2468999999 888
Q ss_pred EEEECCCC----------------------------CCceEEEeecCCCCCCceEeeee-cCCceEEEEEEcCCCcEEEE
Q 009441 251 YITMDEIL----------------------------RPDKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFI 301 (534)
Q Consensus 251 Y~~~d~~~----------------------------r~~~v~~~~lgt~~~~d~lv~~e-~d~~~~v~~~~S~Dg~~l~i 301 (534)
|.+.++.. ...+|+.+++.++. ...+... ....+...+.+||||++|++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK--TVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE--EEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc--eEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 88754321 12468888886652 2233322 12234456899999999988
Q ss_pred EecCc--ceeEEEEEeCCCCCceeEeeecccc--e----eEEEee--eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEE
Q 009441 302 ASESK--ITRFVFYLDVSKPEELRVLTPRVVG--V----DTAASH--RGNHFFITRRSDELFNSELLACPVDNTSETTVL 371 (534)
Q Consensus 302 ~~~~~--~~~ev~~~d~~~~~~~~~l~~~~~g--~----~~~v~~--~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~l 371 (534)
...+. ....|+++++.++...+.+...... . ...+++ +|. +++.++.+ ...+|+.++.... ... .
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~--g~~~l~~~~~~~~-~~~-~ 349 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRD--GWNHLYLYDTTGR-LIR-Q 349 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTT--SSCEEEEEETTSC-EEE-E
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccC--CccEEEEEECCCC-EEE-e
Confidence 66432 3468999999886323444322111 0 123666 554 55666543 3578888885431 111 2
Q ss_pred ecCCCCceeee-EEEeC--CEEEEEEeeCC--eeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEE
Q 009441 372 IPHRESVKLQD-IQLFI--DHLAVYEREGG--LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 446 (534)
Q Consensus 372 i~~~~~~~l~~-~~~~~--~~lv~~~~~~g--~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~ 446 (534)
+..... .+.. +.+.+ +.|++....++ ...|+.+++.+ |+ + +.+.-... +.....+.+++.+.+
T Consensus 350 l~~~~~-~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-~~-~------~~l~~~~~---~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 350 VTKGEW-EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG-GK-T------KDLTPESG---MHRTQLSPDGSAIID 417 (706)
T ss_dssp CCCSSS-CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC-CC-C------EESCCSSS---EEEEEECTTSSEEEE
T ss_pred cCCCCe-EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC-CC-c------eeccCCCc---eEEEEECCCCCEEEE
Confidence 333222 2444 45543 47887777665 46899998874 33 2 22221111 111223456788999
Q ss_pred EeccCCCCCeEEEEECCCCcEEEEEEccccCCCCC-CCcEEEEEEEEcCCC-ceecEEEEEeCCCCCCCCCCcEEEEEcC
Q 009441 447 HYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDT-NNYFTERKWASASDG-TQIPICIVYRKNLVKLDGSDPLLLYGYG 524 (534)
Q Consensus 447 ~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~-~~~~~e~v~~~S~DG-~~VP~~lv~~k~~~~~~~~~P~lL~gYG 524 (534)
..++...|++++.+|+++++.+++.... .+.. ..-..+.+.+++.|| .+|+++++.|+++ +.+++.|+||+.||
T Consensus 418 ~~~~~~~p~~i~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~-~~~~~~p~iv~~HG 493 (706)
T 2z3z_A 418 IFQSPTVPRKVTVTNIGKGSHTLLEAKN---PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHF-DPAKKYPVIVYVYG 493 (706)
T ss_dssp EEECSSCSCEEEEEESSSCEEEEEECC---------CCCCEEEEEEECTTSSSEEEEEEECCTTC-CTTSCEEEEEECCC
T ss_pred EecCCCCCcEEEEEECCCCeEeeccccc---hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCC-CCCCCccEEEEecC
Confidence 9999999999999999888744443221 1221 222568899999999 9999999999987 66778999999999
Q ss_pred CCCcCc
Q 009441 525 SYEVIF 530 (534)
Q Consensus 525 gyg~~~ 530 (534)
|.+...
T Consensus 494 g~~~~~ 499 (706)
T 2z3z_A 494 GPHAQL 499 (706)
T ss_dssp CTTCCC
T ss_pred CCCcee
Confidence 988763
No 11
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=2.9e-16 Score=174.40 Aligned_cols=318 Identities=12% Similarity=0.035 Sum_probs=194.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--------------------ccceeEEccCC-eEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--------------------VTASVEWAGNE-ALVY 251 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--------------------~~~~~~Ws~Dg-~l~Y 251 (534)
+..+.|||||++|||+.+ + +|+++|+.+|+.......+ ....++|+||| .|+|
T Consensus 112 ~~~~~~SPDG~~la~~~~--~----~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVYQ--N----NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp BCCEEECSSTTCEEEEET--T----EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred cccceECCCCCEEEEEEC--C----eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 456899999999999964 2 7999999998765321111 11369999999 8999
Q ss_pred EEECCCCC-----------------------------CceEEEeecCCCCCC-ceEeee----ecCCceEEEEEEcCCCc
Q 009441 252 ITMDEILR-----------------------------PDKAWLHKLEADQSN-DICLYH----EKDDIYSLGLQASESKK 297 (534)
Q Consensus 252 ~~~d~~~r-----------------------------~~~v~~~~lgt~~~~-d~lv~~----e~d~~~~v~~~~S~Dg~ 297 (534)
.+.++... ..+|+.+++.++... ...+.. .....+...+.+|||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 88654211 125566665543210 001100 01223445688999987
Q ss_pred EEEEEecC-cceeEEEEEe----CCCCCceeEee----ecccc-e------eEEEeeeCCEEEEEEcCCCCCccEEEEEe
Q 009441 298 FLFIASES-KITRFVFYLD----VSKPEELRVLT----PRVVG-V------DTAASHRGNHFFITRRSDELFNSELLACP 361 (534)
Q Consensus 298 ~l~i~~~~-~~~~ev~~~d----~~~~~~~~~l~----~~~~g-~------~~~v~~~g~~lyi~tn~~~~~~~~L~~~~ 361 (534)
.++...+. .....|++++ +.+++ .+.+. ....+ + ...++++|+.+++.+.. .....+|+.++
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~g~~~l~~~~ 343 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD-KDGYKHIHYIK 343 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC-TTSCEEEEEES
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc-cCCceEEEEEE
Confidence 66553332 3456899999 66543 33333 22222 1 22377889988886554 23467899998
Q ss_pred CCCCCCceEEecCCCCceeeeEEE-eCCEEEEEEee----CCeeEEEEEECCCCCCcccccCCCceee--ecCceeeEeC
Q 009441 362 VDNTSETTVLIPHRESVKLQDIQL-FIDHLAVYERE----GGLQKITTYRLPAVGEPLKSLQGGKSVE--FIDPVYSIDP 434 (534)
Q Consensus 362 ~~~~~~~~~li~~~~~~~l~~~~~-~~~~lv~~~~~----~g~~~l~~~~l~~~g~~~~~~~~~~~i~--lp~~~~~i~~ 434 (534)
+++.. .. .+..... .+.++.. .++.|++.... .+..+|+.++++. |... .+.+. ++.....+..
T Consensus 344 ~~~~~-~~-~lt~~~~-~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~-g~~~-----~~~l~~~~~~~~~~~~~ 414 (719)
T 1z68_A 344 DTVEN-AI-QITSGKW-EAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGS-YPPS-----KKCVTCHLRKERCQYYT 414 (719)
T ss_dssp SCSTT-CE-ECSCSSS-CEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSS-SSCC-----EEESSTTTTTTTBCBEE
T ss_pred CCCCc-eE-ecccCce-EEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCC-CCCC-----ceeccCccCCCCCceEE
Confidence 86533 22 2332222 2333333 34577777766 5777899998853 3210 01121 1101001111
Q ss_pred CCCccCccEEEEEeccCCCCCeEEEEECCCCcEE-EEEEcccc-CCCCCCCc-EEEEEEEEcCCCceecEEEEEeCCCCC
Q 009441 435 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV-LKKIETVL-GGFDTNNY-FTERKWASASDGTQIPICIVYRKNLVK 511 (534)
Q Consensus 435 ~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~-~~~~~~~~-~~~d~~~~-~~e~v~~~S~DG~~VP~~lv~~k~~~~ 511 (534)
...+.+++.+++.+++++.| .++.||+++++.. ++..++.+ ..++...+ .++.+++++.| .+|+++++.|++. +
T Consensus 415 ~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~-~ 491 (719)
T 1z68_A 415 ASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQF-D 491 (719)
T ss_dssp EEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTC-C
T ss_pred EEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCC-C
Confidence 12234577899999999988 6889999888854 33332210 12333334 67999999998 9999999999987 6
Q ss_pred CCCCCcEEEEEcCCCCcCc
Q 009441 512 LDGSDPLLLYGYGSYEVIF 530 (534)
Q Consensus 512 ~~~~~P~lL~gYGgyg~~~ 530 (534)
.+++.|+||++||+.+...
T Consensus 492 ~~~~~p~vl~~hG~~~~~~ 510 (719)
T 1z68_A 492 RSKKYPLLIQVYGGPCSQS 510 (719)
T ss_dssp SSSCEEEEEEECCCTTBCC
T ss_pred CCCCccEEEEECCCCCcCc
Confidence 7788999999999998753
No 12
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.75 E-value=2.7e-16 Score=170.44 Aligned_cols=296 Identities=15% Similarity=0.064 Sum_probs=189.9
Q ss_pred EEEEEEECCCCCEEEEEEcC-CCCeEEEEEEEEC--CCCCeeccccCCccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDT-KGDEIYTVYVIDI--ETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~-~G~E~~~l~v~dl--~tg~~~~~~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.+..+.|||| .++|+.+. +|++...|+++++ +++........+. ...+|++|| +++|++.... .+..++
T Consensus 66 ~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~~~-~~~~~s~dg~~~~~~s~~~~----~~~l~d 138 (582)
T 3o4h_A 66 SVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPM-RILSGVDTGEAVVFTGATED----RVALYA 138 (582)
T ss_dssp EECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSCSB-EEEEEEECSSCEEEEEECSS----CEEEEE
T ss_pred ccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccccCCCCc-eeeeeCCCCCeEEEEecCCC----CceEEE
Confidence 5667899999 68888885 7788889999998 6554421122222 246899999 8888875321 233447
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-ceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi 345 (534)
+.++. -+.+.... . .++.+||||++|+..+... ....||++++++++ ++.+........ ..++++|..|+
T Consensus 139 ~~~g~--~~~l~~~~--~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~~~~~~~~~SpDG~~l~- 210 (582)
T 3o4h_A 139 LDGGG--LRELARLP--G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMKVTA- 210 (582)
T ss_dssp EETTE--EEEEEEES--S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-CEEECCSSCEEEEEEECTTSCEEE-
T ss_pred ccCCc--EEEeecCC--C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-ceEeecCCCccccceECCCCCEEE-
Confidence 66552 23344332 2 3577899999998766543 33679999998775 666654432222 33789999888
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEE--------EeCC-EEEEEEeeCCeeEEEEEECCCCCCcccc
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ--------LFID-HLAVYEREGGLQKITTYRLPAVGEPLKS 416 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~--------~~~~-~lv~~~~~~g~~~l~~~~l~~~g~~~~~ 416 (534)
.+.. ....+|+..++++... . ++... +..+..+. +.+| .+++....+|..+|+.+ |+.
T Consensus 211 ~~~~--~~~~~i~~~d~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-----g~~--- 277 (582)
T 3o4h_A 211 GLET--AREARLVTVDPRDGSV-E-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-----GER--- 277 (582)
T ss_dssp EEEC--SSCEEEEEECTTTCCE-E-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-----TEE---
T ss_pred EccC--CCeeEEEEEcCCCCcE-E-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-----CCe---
Confidence 4433 2346899999875432 2 33322 22344444 6654 78888888897666654 331
Q ss_pred cCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCC
Q 009441 417 LQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDG 496 (534)
Q Consensus 417 ~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG 496 (534)
+..+.. .+..+..+ +..++++.++..+|+++|.+|..+ +.+.+...+ .++......+.+++++.||
T Consensus 278 ------~~~~~~--~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l~~~~---~~~~~~~~~~~~~~~~~~g 343 (582)
T 3o4h_A 278 ------VEAPQG--NHGRVVLW--RGKLVTSHTSLSTPPRIVSLPSGE-PLLEGGLPE---DLRRSIAGSRLVWVESFDG 343 (582)
T ss_dssp ------ECCCSS--EEEEEEEE--TTEEEEEEEETTEEEEEEEETTCC-EEECCCCCH---HHHHTEEEEEEEEEECTTS
T ss_pred ------eccCCC--ceEEEEec--CCEEEEEEcCCCCCCeEEEEcCCC-ceEEEecCC---ccccccCcceEEEEECCCC
Confidence 111221 22222222 345778999999999999999765 433221000 0112345689999999999
Q ss_pred ceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcCccc
Q 009441 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVIFFF 532 (534)
Q Consensus 497 ~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~~~p 532 (534)
.+|+++++.|++. . ++.|+||++|||++....+
T Consensus 344 ~~i~~~~~~p~~~-~--~~~p~vv~~HG~~~~~~~~ 376 (582)
T 3o4h_A 344 SRVPTYVLESGRA-P--TPGPTVVLVHGGPFAEDSD 376 (582)
T ss_dssp CEEEEEEEEETTS-C--SSEEEEEEECSSSSCCCCS
T ss_pred CEEEEEEEcCCCC-C--CCCcEEEEECCCccccccc
Confidence 9999999999986 4 3789999999998875444
No 13
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=2.8e-16 Score=174.40 Aligned_cols=316 Identities=9% Similarity=0.044 Sum_probs=192.5
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---Cc-----------------cceeEEccCC-eEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GV-----------------TASVEWAGNE-ALVY 251 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~-----------------~~~~~Ws~Dg-~l~Y 251 (534)
+..+.|||||++|||+.+ + +|+++|+++|+....... ++ ...++|+||| .|+|
T Consensus 116 ~~~~~~SPdG~~la~~~~--~----~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~ 189 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--N----NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAY 189 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--T----EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEE
T ss_pred ccccEECCCCCEEEEEEC--C----eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEE
Confidence 456789999999999986 2 799999999876542111 11 1359999999 8999
Q ss_pred EEECCCCC-----------------------------CceEEEeecCCCCCCceEeeeec-----CCceEEEEEEcCCCc
Q 009441 252 ITMDEILR-----------------------------PDKAWLHKLEADQSNDICLYHEK-----DDIYSLGLQASESKK 297 (534)
Q Consensus 252 ~~~d~~~r-----------------------------~~~v~~~~lgt~~~~d~lv~~e~-----d~~~~v~~~~S~Dg~ 297 (534)
.+.+.... ...|+.+++.++... ..+... .......+.+||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 190 AAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee--EEeeCCccCCCccceeEEEEEeCCCe
Confidence 88653110 126777787665311 112211 122344689999999
Q ss_pred EEEEEecC-cceeEEEEEeCCCCCceeEeeec-ccce------eEEEeeeCCEEEEE-EcCCC--CCccEEEEEe-CCCC
Q 009441 298 FLFIASES-KITRFVFYLDVSKPEELRVLTPR-VVGV------DTAASHRGNHFFIT-RRSDE--LFNSELLACP-VDNT 365 (534)
Q Consensus 298 ~l~i~~~~-~~~~ev~~~d~~~~~~~~~l~~~-~~g~------~~~v~~~g~~lyi~-tn~~~--~~~~~L~~~~-~~~~ 365 (534)
+|+..++. .....|+++++++++ ...+... ..+. ...++++|+.|++. +..++ ....+|+.++ ....
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~ 346 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTGV-CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS 346 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTCC-EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCC
Confidence 88766544 345789999998765 4433322 1121 23478899999887 44321 1255888888 3332
Q ss_pred CC--ceEEecCCCCceeeeEEEe--CCEEEEEEeeC--CeeEEEEEECCCCCCcccccCCCceee--ecCceeeEeCCCC
Q 009441 366 SE--TTVLIPHRESVKLQDIQLF--IDHLAVYEREG--GLQKITTYRLPAVGEPLKSLQGGKSVE--FIDPVYSIDPSES 437 (534)
Q Consensus 366 ~~--~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~--g~~~l~~~~l~~~g~~~~~~~~~~~i~--lp~~~~~i~~~~~ 437 (534)
.. ...+.....+ ....+.+. ++.|++....+ +..+|+.++++. +.... .+. ++... .+..+..
T Consensus 347 ~~~~~~~l~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~------~l~~~~~~~~-~~~~~~~ 417 (723)
T 1xfd_A 347 SNDNIQSITSGDWD-VTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG-NFNRQ------CLSCDLVENC-TYFSASF 417 (723)
T ss_dssp SSCCCCBSCCSSSC-EEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST-TCCCB------CSSTTSSSSC-CCCEEEE
T ss_pred CccceeEeecCCeE-EEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC-CCCcc------eecccccCCC-CeEEEEE
Confidence 20 1123222222 12224555 45788777766 667788887662 21111 121 00111 1111223
Q ss_pred ccCccEEEEEeccCCCCCeEEEEECCCCcEE-EEEEcccc-CCCCCCC-cEEEEEEEEcCCCceecEEEEEeCCCCCCCC
Q 009441 438 VFSSRILRFHYSSLRTPPSVYDYDMDMGISV-LKKIETVL-GGFDTNN-YFTERKWASASDGTQIPICIVYRKNLVKLDG 514 (534)
Q Consensus 438 ~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~-~~~~~~~~-~~~d~~~-~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~ 514 (534)
+.+++.+.+.++++..|..++ ++..+++.. .+...+.. ..++... ..++.+++++.|| +|+++|+.|++. +.++
T Consensus 418 spdg~~l~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~-~~~~ 494 (723)
T 1xfd_A 418 SHSMDFFLLKCEGPGVPMVTV-HNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATF-TDTT 494 (723)
T ss_dssp CTTSSEEEEECCSSSSCCEEE-EETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSC-CSSS
T ss_pred CCCCCEEEEEccCCCCCeEEE-EECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCC-CCCC
Confidence 457889999999999998765 476665532 33221100 0111212 2568888999999 999999999987 6778
Q ss_pred CCcEEEEEcCCCCcC
Q 009441 515 SDPLLLYGYGSYEVI 529 (534)
Q Consensus 515 ~~P~lL~gYGgyg~~ 529 (534)
+.|+||+.|||.+..
T Consensus 495 ~~p~vv~~HG~~~~~ 509 (723)
T 1xfd_A 495 HYPLLLVVDGTPGSQ 509 (723)
T ss_dssp CEEEEEECCCCTTCC
T ss_pred ccCEEEEEcCCCCcc
Confidence 899999999998864
No 14
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=7.4e-13 Score=132.95 Aligned_cols=243 Identities=12% Similarity=0.112 Sum_probs=154.7
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCC-------------
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEI------------- 257 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~------------- 257 (534)
+..+.|||||++|||+.+.++++..+|+++|+++|+.... ..+. ...++|+||| .|+|...+..
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 4567999999999999887766788999999999876542 1223 4569999999 8999875410
Q ss_pred ---------CCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-----c-eeEEEEEeCCCCCce
Q 009441 258 ---------LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-----I-TRFVFYLDVSKPEEL 322 (534)
Q Consensus 258 ---------~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-----~-~~ev~~~d~~~~~~~ 322 (534)
....+||.+++.++.. -..+.. + ....+.+|+|| .++...... . ..+||+++ ++ ++
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~-~~ 210 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DG-KE 210 (347)
T ss_dssp C---------CEEEEEEEETTTTEE-EEEEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TT-EE
T ss_pred eecCcccccCccceEEEEECCCCeE-EeeecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CC-ce
Confidence 0125789999876521 022322 2 22346789999 444332221 2 56899999 33 35
Q ss_pred eEeeecccceeEEEeeeCCEEEEEEcCC---CCCccEEEEEeCCCCCCceEEecCCCCceeee-EEEeCCEEEEEEeeCC
Q 009441 323 RVLTPRVVGVDTAASHRGNHFFITRRSD---ELFNSELLACPVDNTSETTVLIPHRESVKLQD-IQLFIDHLAVYEREGG 398 (534)
Q Consensus 323 ~~l~~~~~g~~~~v~~~g~~lyi~tn~~---~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~-~~~~~~~lv~~~~~~g 398 (534)
+.+... +....++++|..|++.++.. ...+.+|+.++ +.. ...+.+. .+..+.. +.+. +.+++....++
T Consensus 211 ~~l~~~--~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~~~~~~s-dg~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK--VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDE-VDRGVGQAKIKD-GKVYFTLFEEG 283 (347)
T ss_dssp EEEEEE--ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTT-CCSEEEEEEEET-TEEEEEEEETT
T ss_pred EEeccC--cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc-eEecccc-CCcccCCccEEc-CcEEEEEecCC
Confidence 556554 33344688999999988752 12457898888 221 1123333 2335665 6666 66888888899
Q ss_pred eeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEE
Q 009441 399 LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKK 471 (534)
Q Consensus 399 ~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~ 471 (534)
..+|+ ++ + |+. ..+ ++... .+..+. +.. .++++.++..+|.++|.+| |+.+.++
T Consensus 284 ~~~l~-~~-~--g~~-------~~~-~~~~~-~v~~~~--~s~-~~~~~~~~~~~~~~l~~~~---g~~~~lt 337 (347)
T 2gop_A 284 SVNLY-IW-D--GEI-------KPI-AKGRH-WIMGFD--VDE-IVVYLKETATRLRELFTWD---GEEKQLT 337 (347)
T ss_dssp EEEEE-EE-S--SSE-------EEE-ECSSS-EEEEEE--ESS-SEEEEEECSSSCCEEEEES---SSEEECC
T ss_pred cEEEE-Ec-C--Cce-------EEE-ecCCC-eEEeee--eeC-cEEEEEcCCCChHHheEeC---CcEEEec
Confidence 88899 87 4 552 122 22221 232222 122 5889999999999999998 5544443
No 15
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.34 E-value=1.1e-10 Score=118.66 Aligned_cols=253 Identities=14% Similarity=0.069 Sum_probs=151.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
+..+.|||||++|||+.+.+|.. +|+++|+++|+........ ....+.|+||| .|+|++.+. +||.+++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~--~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-----~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNR--NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL-----NLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSC--EEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT-----EEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCCc--eEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC-----cEEEEECC
Confidence 34568999999999999987764 6899999999765421111 12238899999 888887432 79999987
Q ss_pred CCCCCceEeeeecCCceEEE-------------------EEEcCCCcEEEEEe--cCcceeEEEEEeCCCCCceeEeeec
Q 009441 270 ADQSNDICLYHEKDDIYSLG-------------------LQASESKKFLFIAS--ESKITRFVFYLDVSKPEELRVLTPR 328 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~-------------------~~~S~Dg~~l~i~~--~~~~~~ev~~~d~~~~~~~~~l~~~ 328 (534)
++. .+.++.... .+... ..++||++++++.. .......||++++.+++ .+.+...
T Consensus 111 ~~~--~~~~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~~~~~ 186 (396)
T 3c5m_A 111 TLE--EQVIYTVDE-EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE-LEVIHQD 186 (396)
T ss_dssp TCC--EEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC-EEEEEEE
T ss_pred CCC--cEEEEeccc-ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc-EEeeccC
Confidence 653 345554322 22211 23567777665432 12345689999998765 5555443
Q ss_pred cccee-EEEee-eCCEEEEEEcCCC-CCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeE--
Q 009441 329 VVGVD-TAASH-RGNHFFITRRSDE-LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQK-- 401 (534)
Q Consensus 329 ~~g~~-~~v~~-~g~~lyi~tn~~~-~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~-- 401 (534)
..... ..+++ +++.|++.++... ..+.+|+.++++.... ..+........+..+.+.+ ++|++....++...
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 265 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV 265 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccce
Confidence 22222 33677 7778888876311 1126888888864321 1233322233466677764 46777777666655
Q ss_pred EEEEECCCCCCcccccCCCceee-ecCceeeEeCCCCcc-CccEEEEEeccCCCC--------------CeEEEEECCCC
Q 009441 402 ITTYRLPAVGEPLKSLQGGKSVE-FIDPVYSIDPSESVF-SSRILRFHYSSLRTP--------------PSVYDYDMDMG 465 (534)
Q Consensus 402 l~~~~l~~~g~~~~~~~~~~~i~-lp~~~~~i~~~~~~~-~~~~l~~~~sS~~~P--------------~~~y~~d~~~~ 465 (534)
|+++++.+ |+. ..+. ++.. .. .... +++.+++. .+. .| ..+|.+|+.++
T Consensus 266 l~~~d~~~-g~~-------~~l~~~~~~--~~---~~s~~dg~~l~~~-~~~-~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 266 IYKANPET-LEN-------EEVMVMPPC--SH---LMSNFDGSLMVGD-GCD-APVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEECTTT-CCE-------EEEEECCSE--EE---EEECSSSSEEEEE-ECC-C----------CCCCCCEEEEEETTTT
T ss_pred EEEEECCC-CCe-------EEeeeCCCC--CC---CccCCCCceEEEe-cCC-cceeeccccccccCCCCcEEEEecccC
Confidence 99999874 441 1222 2221 11 1123 45544443 322 44 78999999988
Q ss_pred cEEEEEE
Q 009441 466 ISVLKKI 472 (534)
Q Consensus 466 ~~~~~~~ 472 (534)
+.+.+..
T Consensus 331 ~~~~l~~ 337 (396)
T 3c5m_A 331 SAQKLCK 337 (396)
T ss_dssp BCCEEEE
T ss_pred ceEEccC
Confidence 8666554
No 16
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.33 E-value=8.7e-10 Score=112.06 Aligned_cols=257 Identities=13% Similarity=0.064 Sum_probs=155.2
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc-cCC-ccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCC
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~-i~~-~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~ 272 (534)
++|||||++|||+.+.+|. .+|+++|+++|+..... ... ....+.|+||| .|+|...+ ..||.+++.++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 5799999999999986664 58999999999876531 111 12247899999 88888733 479999998763
Q ss_pred CCceEeeeecCCceE--EEEEEcCCCcEEEEEec-------------------CcceeEEEEEeCCCCCceeEeeecccc
Q 009441 273 SNDICLYHEKDDIYS--LGLQASESKKFLFIASE-------------------SKITRFVFYLDVSKPEELRVLTPRVVG 331 (534)
Q Consensus 273 ~~d~lv~~e~d~~~~--v~~~~S~Dg~~l~i~~~-------------------~~~~~ev~~~d~~~~~~~~~l~~~~~g 331 (534)
.+.++..+. .+. .....++||++++.... ......||++++.+++ .+.+......
T Consensus 114 --~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~ 189 (388)
T 3pe7_A 114 --ENVVYQVPA-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-STVILQENQW 189 (388)
T ss_dssp --EEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-EEEEEEESSC
T ss_pred --ceeeeechh-hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc-eEEeecCCcc
Confidence 345554322 332 22345899999875331 1123689999998875 5555543322
Q ss_pred e-eEEEee-eCCEEEEEEcCCC-CCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeE--EEE
Q 009441 332 V-DTAASH-RGNHFFITRRSDE-LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQK--ITT 404 (534)
Q Consensus 332 ~-~~~v~~-~g~~lyi~tn~~~-~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~--l~~ 404 (534)
. ...+++ +|+.|++..+... ....+|+.++++.... ..+........+..+.+.+ +.|++....++... |++
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEE
Confidence 2 234788 8888988886421 1256899998764321 2233332223455666764 46767666666554 999
Q ss_pred EECCCCCCcccccCCCcee-eecCceeeEe---CCCCccCccEEEEEec-----cCCCCCeEEEEECCCCcEEEEEE
Q 009441 405 YRLPAVGEPLKSLQGGKSV-EFIDPVYSID---PSESVFSSRILRFHYS-----SLRTPPSVYDYDMDMGISVLKKI 472 (534)
Q Consensus 405 ~~l~~~g~~~~~~~~~~~i-~lp~~~~~i~---~~~~~~~~~~l~~~~s-----S~~~P~~~y~~d~~~~~~~~~~~ 472 (534)
+++.+ |+. +.+ .++....... +.....+++.+.+... +......+|.+|+.+++.+.+..
T Consensus 269 ~d~~~-g~~-------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 269 ADPET-LEN-------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp ECTTT-CCE-------EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEE
T ss_pred EecCC-Cce-------EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecc
Confidence 99885 442 122 2332111111 1112345566665442 12446789999999998776665
No 17
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.31 E-value=1.9e-09 Score=111.64 Aligned_cols=201 Identities=9% Similarity=0.032 Sum_probs=138.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
+..++|||||++|||+...+|. .+|+++|+++|+.... ...+....++|+||| .++|+...+ ...+||.+++.+
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~--~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~--g~~~i~~~d~~~ 256 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLAS 256 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSS--CEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTT
T ss_pred ceeeEEcCCCCEEEEEEecCCC--cEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC--CCceEEEEECCC
Confidence 6678999999999999876654 6899999999986542 122334569999999 788886432 234799999876
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRS 349 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~ 349 (534)
+. ...+.. .......+.+||||++|++.+.......||++++.++. .+.+....... ...++++|+.|++.+..
T Consensus 257 ~~--~~~l~~--~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 257 GQ--IRQVTD--GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CC--EEECCC--CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred CC--EEeCcC--CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-EEEEecCCCcccCeEECCCCCEEEEEECc
Confidence 53 223322 22334467899999999988765556689999998764 44443322111 23478899988888764
Q ss_pred CCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECC
Q 009441 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~ 408 (534)
+ ..+.|...++.+... . .+.... .+..+.+.+ ..|++....++...|++++++
T Consensus 332 ~--g~~~i~~~d~~~~~~-~-~l~~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 332 G--GQQHIAKQDLATGGV-Q-VLSSTF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp S--SCEEEEEEETTTCCE-E-ECCCSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred C--CceEEEEEECCCCCE-E-EecCCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 2 357899999875432 1 233222 467777765 467777777888899999987
No 18
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.29 E-value=6e-09 Score=105.92 Aligned_cols=293 Identities=15% Similarity=0.117 Sum_probs=173.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++|+++...+| .|+++|+.+++.+.. ........++|+||| .++++... ...|+.+++.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~----~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~ 146 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASS----TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG----DKTVSVINTV 146 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT----TTEEEEEETT
T ss_pred CccceEECCCCCEEEEEECCCC----EEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC----CCEEEEEECC
Confidence 4678899999999998865444 699999999987653 112223569999999 56666532 3478889987
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
++. -...+.... ....+.+++||++|++.... ...|++.|+.++. .....+...... ..++++|..+++...
T Consensus 147 ~~~--~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~--~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 147 TKA--VINTVSVGR--SPKGIAVTPDGTKVYVANFD--SMSISVIDTVTNS-VIDTVKVEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp TTE--EEEEEECCS--SEEEEEECTTSSEEEEEETT--TTEEEEEETTTTE-EEEEEECSSEEEEEEECTTSSEEEEEEE
T ss_pred CCc--EEEEEecCC--CcceEEECCCCCEEEEEeCC--CCEEEEEECCCCe-EEEEEecCCCccceEECCCCCEEEEEec
Confidence 653 122232211 12457899999998775433 3468899987754 332333222222 236677888877664
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCC-ce---
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGG-KS--- 422 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~-~~--- 422 (534)
. ..+..|...++.+... ...++... .+..+.+.. ++|++....++ .|+++++.+ |+.+..+... ..
T Consensus 220 ~--~~~~~v~~~d~~~~~~-~~~~~~~~--~~~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~-~~~~~~~~~~~~~~~~ 291 (391)
T 1l0q_A 220 D--KYFNTVSMIDTGTNKI-TARIPVGP--DPAGIAVTPDGKKVYVALSFXN--TVSVIDTAT-NTITATMAVGKNPYAS 291 (391)
T ss_dssp C--SSCCEEEEEETTTTEE-EEEEECCS--SEEEEEECTTSSEEEEEETTTT--EEEEEETTT-TEEEEEEECSSSEECC
T ss_pred C--cCCCcEEEEECCCCeE-EEEEecCC--CccEEEEccCCCEEEEEcCCCC--EEEEEECCC-CcEEEEEECCcCCCcc
Confidence 2 2456788888865421 12444432 366777764 46777776665 577788875 4432111000 00
Q ss_pred ---ee-ecCcee-eEeCCCCccCccEEE----EEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEc
Q 009441 423 ---VE-FIDPVY-SIDPSESVFSSRILR----FHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASA 493 (534)
Q Consensus 423 ---i~-lp~~~~-~i~~~~~~~~~~~l~----~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S 493 (534)
+. +|.... .+..++.+....... +.+.+.......+.+|+.+|..... ..+. ..|.+...-..++++++
T Consensus 292 ~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~~~-~~~~-~~~~~~g~y~~~~~~~~ 369 (391)
T 1l0q_A 292 GQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKK-QNPT-HTYSETGIYTVRLTVSN 369 (391)
T ss_dssp SSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEECS-SSCE-ECCSSCEEEEEEEEEEE
T ss_pred ceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcccCc-CCCe-EEeCCCceEEEEEEEEC
Confidence 00 111000 000011111111110 2344555677889999988875322 1222 24677667778899999
Q ss_pred CCC--ceecEEEEEeCCC
Q 009441 494 SDG--TQIPICIVYRKNL 509 (534)
Q Consensus 494 ~DG--~~VP~~lv~~k~~ 509 (534)
.|| +++|+.++++++.
T Consensus 370 ~~g~~~~~~~~~v~~~~~ 387 (391)
T 1l0q_A 370 SNGTDSQISTVNVVLKGS 387 (391)
T ss_dssp TTEEEEEEEEEEEECTTS
T ss_pred CCCcEEEEEEEEEEcCCC
Confidence 999 7999999998875
No 19
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.23 E-value=2.9e-09 Score=118.21 Aligned_cols=200 Identities=11% Similarity=0.140 Sum_probs=127.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC---Ceeccc-cCCccceeEEccCC-eEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG---TPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg---~~~~~~-i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~ 266 (534)
.+..+.|||||++||++.. .+|+++|+++| +..... ..+....++|+||| .++|.+. .+||.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~------~~i~~~ 177 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG------RNLWVI 177 (741)
T ss_dssp ESCCCEECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET------TEEEEE
T ss_pred CcceeEECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC------CcEEEE
Confidence 4677899999999999986 47999999998 544321 11223569999999 7888762 279998
Q ss_pred ecCCCCCCceEeeeecCCce---------------EEEEEEcCCCcEEEEEecCc-------------------------
Q 009441 267 KLEADQSNDICLYHEKDDIY---------------SLGLQASESKKFLFIASESK------------------------- 306 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~---------------~v~~~~S~Dg~~l~i~~~~~------------------------- 306 (534)
++.++. ...+........ ...+.+||||++|++.+...
T Consensus 178 d~~~g~--~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 178 DLASGR--QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp ETTTTE--EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred ecCCCC--EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 887642 222222111111 12478999999998875322
Q ss_pred -----ceeEEEEEeCCC-CCceeEeeec--ccc-e-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCC
Q 009441 307 -----ITRFVFYLDVSK-PEELRVLTPR--VVG-V-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE 376 (534)
Q Consensus 307 -----~~~ev~~~d~~~-~~~~~~l~~~--~~g-~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~ 376 (534)
....|+++++++ +. ...+... ..+ + ...+ ++|..|++...........|..+++.+... ..++....
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~ 332 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ-RVLAHETS 332 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE-EEEEEEEC
T ss_pred CCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce-EEEEEcCC
Confidence 223889999987 65 4333321 111 1 2347 999999887753244568899999876432 12333221
Q ss_pred Cc---eeeeEEEeCC-EEEEEEeeCCeeEEEEEECC
Q 009441 377 SV---KLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 377 ~~---~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 408 (534)
.. .+..+.+.+| .+++....+|..+|+.++++
T Consensus 333 ~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~ 368 (741)
T 2ecf_A 333 PTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK 368 (741)
T ss_dssp SSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS
T ss_pred CCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC
Confidence 11 1345666543 47777777888889998876
No 20
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.23 E-value=3.9e-09 Score=116.52 Aligned_cols=271 Identities=12% Similarity=0.074 Sum_probs=158.7
Q ss_pred CCc--eEEeecchhc----CCCCc-----EEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CCccce
Q 009441 173 PPE--HLILDENVKA----EGRGF-----YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTAS 240 (534)
Q Consensus 173 ~~e--evllD~n~~a----~~~~~-----~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~~~~~ 240 (534)
+.. +++++.+.+. ...+. ..+..+.|||| ++|+|+.+ .+|+++|+++|+...... ......
T Consensus 53 g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~------~~i~~~d~~~~~~~~l~~~~~~~~~ 125 (706)
T 2z3z_A 53 GKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ------GGLVGFDMLARKVTYLFDTNEETAS 125 (706)
T ss_dssp -----CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET------TEEEEEETTTTEEEEEECCTTCCTT
T ss_pred CcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC------CEEEEEECCCCceEEccCCcccccC
Confidence 355 7888887652 11111 34778899999 99999876 479999999997654321 222355
Q ss_pred eEEccCC-eEEEEEECCCCCCceEEEeecCC-----CCCCceEeeeecCCce-------------EEEEEEcCCCcEEEE
Q 009441 241 VEWAGNE-ALVYITMDEILRPDKAWLHKLEA-----DQSNDICLYHEKDDIY-------------SLGLQASESKKFLFI 301 (534)
Q Consensus 241 ~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt-----~~~~d~lv~~e~d~~~-------------~v~~~~S~Dg~~l~i 301 (534)
++|+||| .++|+. + ..||.+++.+ +.. ..+........ ...+.+||||++|++
T Consensus 126 ~~~SpdG~~la~~~-~-----~~i~v~~~~~~~~~~g~~--~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 126 LDFSPVGDRVAYVR-N-----HNLYIARGGKLGEGMSRA--IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp CEECTTSSEEEEEE-T-----TEEEEEECBCTTSCCCCC--EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred CcCCCCCCEEEEEE-C-----CeEEEEecCcccccCCCc--EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence 9999999 888863 2 4799999876 532 22222111111 135789999999988
Q ss_pred EecC------------------------------cceeEEEEEeCCCCCceeEeeec---ccce-eEEEeeeCCEEEEEE
Q 009441 302 ASES------------------------------KITRFVFYLDVSKPEELRVLTPR---VVGV-DTAASHRGNHFFITR 347 (534)
Q Consensus 302 ~~~~------------------------------~~~~ev~~~d~~~~~~~~~l~~~---~~g~-~~~v~~~g~~lyi~t 347 (534)
.+.+ .....|++++++++. .+.+... ...+ ...++++|..|++.+
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK-TVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE-EEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc-eEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 7621 134679999998764 3333321 1111 234788899888866
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCc---eeeeEEEeC---CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCc
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESV---KLQDIQLFI---DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGK 421 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~---~l~~~~~~~---~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~ 421 (534)
.........|..+++.+......+..+.... .+..+.+.. +.+++....+|..+|+.++.+ |..+.
T Consensus 277 ~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~--~~~~~------ 348 (706)
T 2z3z_A 277 VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT--GRLIR------ 348 (706)
T ss_dssp ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT--SCEEE------
T ss_pred eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC--CCEEE------
Confidence 4324556789999987642212233222111 124456654 456666677788889998865 44222
Q ss_pred eeeecCceeeE-eCCCCccCccEEEEEeccCCCC--CeEEEEECCCCcEEEE
Q 009441 422 SVEFIDPVYSI-DPSESVFSSRILRFHYSSLRTP--PSVYDYDMDMGISVLK 470 (534)
Q Consensus 422 ~i~lp~~~~~i-~~~~~~~~~~~l~~~~sS~~~P--~~~y~~d~~~~~~~~~ 470 (534)
.+.-.. ..+ .....+.+++.+++..+. ..| ..+|.+|+.+++.+.+
T Consensus 349 ~l~~~~--~~v~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 349 QVTKGE--WEVTNFAGFDPKGTRLYFESTE-ASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp ECCCSS--SCEEEEEEECTTSSEEEEEESS-SCTTCBEEEEEETTCCCCEES
T ss_pred ecCCCC--eEEEeeeEEcCCCCEEEEEecC-CCCceEEEEEEEcCCCCceec
Confidence 221111 111 111223456666665433 333 3789999888764443
No 21
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.21 E-value=2e-08 Score=103.95 Aligned_cols=248 Identities=13% Similarity=0.082 Sum_probs=153.5
Q ss_pred CCCCCEEEEEEcCCCCe-EEEEEEEECCCCCeeccc-cCCccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCCCCc
Q 009441 199 SPDNKLVAYAEDTKGDE-IYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSND 275 (534)
Q Consensus 199 SPDG~~LA~~~d~~G~E-~~~l~v~dl~tg~~~~~~-i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~~~d 275 (534)
.+.+++|||+....+++ ..+|+++|++++...... -......++|+||| .|+|.+.+. ....|+.+++.++. .
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~--~ 215 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGA--V 215 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCC--E
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCc--E
Confidence 35588999988865442 279999999866543211 12233459999999 888888543 22579999997763 2
Q ss_pred eEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcCCCCCc
Q 009441 276 ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFN 354 (534)
Q Consensus 276 ~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~~~~~~ 354 (534)
..+... +.....+.+||||++|++.........||++++.++. .+.+....... ...++++|..|++.++.+ ..
T Consensus 216 ~~l~~~--~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~--g~ 290 (415)
T 2hqs_A 216 RQVASF--PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQA--GR 290 (415)
T ss_dssp EEEECC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECTTSSEEEEEECTT--SS
T ss_pred EEeecC--CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-EEeCcCCCCcccceEECCCCCEEEEEECCC--CC
Confidence 333322 2334468899999999887665566789999998765 55554432222 234778899999888642 34
Q ss_pred cEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeE
Q 009441 355 SELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 432 (534)
Q Consensus 355 ~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i 432 (534)
.+|+.+++.+... . .+... ...+..+.+.+ ++|++....+|...|+++++.+ |+. . .+..... +
T Consensus 291 ~~i~~~d~~~~~~-~-~l~~~-~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-~~~-~------~l~~~~~---~ 356 (415)
T 2hqs_A 291 PQVYKVNINGGAP-Q-RITWE-GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-Q------VLSSTFL---D 356 (415)
T ss_dssp CEEEEEETTSSCC-E-ECCCS-SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-CCE-E------ECCCSSS---C
T ss_pred cEEEEEECCCCCE-E-EEecC-CCcccCeEECCCCCEEEEEECcCCceEEEEEECCC-CCE-E------EecCCCC---c
Confidence 6899888865432 1 22222 22466677764 4777777777778899999985 441 1 1211111 1
Q ss_pred eCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEE
Q 009441 433 DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (534)
Q Consensus 433 ~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~ 470 (534)
......++++.+.+.-. ......+|.+|+.++..+.+
T Consensus 357 ~~~~~spdg~~l~~~s~-~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 357 ETPSLAPNGTMVIYSSS-QGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEEEECTTSSEEEEEEE-ETTEEEEEEEETTSCCEEEC
T ss_pred CCeEEcCCCCEEEEEEc-CCCccEEEEEECCCCcEEEe
Confidence 11112345565554432 22344799999876664443
No 22
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.21 E-value=4e-09 Score=107.11 Aligned_cols=250 Identities=10% Similarity=0.068 Sum_probs=142.8
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCc-cceeEE--ccCC-eEEEEEECC--------------
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-TASVEW--AGNE-ALVYITMDE-------------- 256 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~-~~~~~W--s~Dg-~l~Y~~~d~-------------- 256 (534)
..|||||++|||+... .+|+++|+++|+.... ..+.. .....| ++|| .++....+.
T Consensus 86 ~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp CEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred eEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 4799999999999853 3799999999986532 22222 222344 7888 555443221
Q ss_pred ---CCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCc---ceeEEEEEeCCCCCceeEeeecc
Q 009441 257 ---ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPRV 329 (534)
Q Consensus 257 ---~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~---~~~ev~~~d~~~~~~~~~l~~~~ 329 (534)
.....+||.+++.++. .+.+... +.....+.+|| ||++|++.+... ....||++++++.. .+.+....
T Consensus 161 ~~~~~~~~~l~~~d~~~g~--~~~l~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~ 235 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGE--STVILQE--NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHA 235 (388)
T ss_dssp HGGGCCCEEEEEEETTTCC--EEEEEEE--SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCC
T ss_pred hhccCCcceEEEEECCCCc--eEEeecC--CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCC
Confidence 1123579999988763 3344433 23345678999 999998877542 24689999987754 55565543
Q ss_pred cce-e--EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCc----eee--eEEEeCCEEEEEEee----
Q 009441 330 VGV-D--TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV----KLQ--DIQLFIDHLAVYERE---- 396 (534)
Q Consensus 330 ~g~-~--~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~----~l~--~~~~~~~~lv~~~~~---- 396 (534)
.+. . ..++++|..|++.++..+.....|+.+++++... ..+....... ... .+...+..|++...+
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 314 (388)
T 3pe7_A 236 EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGY 314 (388)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC----------
T ss_pred CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeeecccc
Confidence 221 1 2378899999888875444445699999876432 2222111000 001 233344566665543
Q ss_pred --CCeeEEEEEECCCCCCcccccCCCceeeecCcee---------eEeCCCCccCccEEEEEeccCCCCCeEEEEECCCC
Q 009441 397 --GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY---------SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 465 (534)
Q Consensus 397 --~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~---------~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~ 465 (534)
.+...|+++++.+ |+ + +.+....... .+.....+.+++.+++.-.. .....+|.+|+.++
T Consensus 315 ~~~~~~~i~~~d~~~-~~-~------~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 315 KIENDPFLYVFNMKN-GT-Q------HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp --CCCCEEEEEETTT-TE-E------EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred ccCCCCEEEEEeccC-Cc-e------EEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 5667899999984 33 1 1232111100 01111223567777766443 34567999988654
No 23
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.13 E-value=9.7e-08 Score=91.91 Aligned_cols=199 Identities=12% Similarity=0.017 Sum_probs=127.5
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC-CCeeccc-cC--CccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGKP-LV--GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t-g~~~~~~-i~--~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
+..+.|||||++||++.+ | .|+++|+++ ++..... .. .....++|+||| .+++...+. ....+||.++
T Consensus 44 v~~~~~spdg~~l~~~~~--~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~l~~~~ 116 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNSE--G----LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE-FGKSAIYLLP 116 (297)
T ss_dssp CEEEEECTTSSEEEEEET--T----EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT-TSSCEEEEEE
T ss_pred eEeeEECCCCCEEEEEcC--C----eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC-CCcceEEEEE
Confidence 567899999999999753 2 799999999 8765421 11 223458999999 777766432 2345899888
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFIT 346 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~ 346 (534)
+.+.. ...+... .. ...+.+++||++|++.........+|.+++.+.. .+.+......+. ..++++|..+++.
T Consensus 117 ~~~~~--~~~~~~~-~~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 117 STGGT--PRLMTKN-LP--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp TTCCC--CEECCSS-SS--EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTSSEEEEE
T ss_pred CCCCc--eEEeecC-CC--ccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCCCEEEEE
Confidence 76553 2233222 22 3346899999999877655556789999887654 444444322222 3477888888887
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeC--------CeeEEEEEECCC
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREG--------GLQKITTYRLPA 409 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~--------g~~~l~~~~l~~ 409 (534)
+..+ ...+|+.++...... ..+... ...+..+.+.+ ++|++....+ +...|+++++.+
T Consensus 191 ~~~~--~~~~i~~~~~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 191 SSRT--GQMQIWRVRVDGSSV--ERITDS-AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp ECTT--SSCEEEEEETTSSCE--EECCCC-SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred ecCC--CCccEEEECCCCCCc--EEEecC-CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 7642 457888888654221 123222 22466677754 4666666554 346799999874
No 24
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.13 E-value=3.5e-09 Score=118.01 Aligned_cols=212 Identities=11% Similarity=0.088 Sum_probs=132.1
Q ss_pred EEEECCCCCEEEEEEcCCC-------------------------------CeEEEEEEEECCC---C---Ceecccc---
Q 009441 195 CFQVSPDNKLVAYAEDTKG-------------------------------DEIYTVYVIDIET---G---TPVGKPL--- 234 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G-------------------------------~E~~~l~v~dl~t---g---~~~~~~i--- 234 (534)
.+.|||||++|||+....+ +...+|+|+|+++ | +......
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 4789999999999864322 2245899999999 8 4332221
Q ss_pred ---C-CccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCC----C-CceEeeeecCCceE-----EEEEEcCCCcEE
Q 009441 235 ---V-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ----S-NDICLYHEKDDIYS-----LGLQASESKKFL 299 (534)
Q Consensus 235 ---~-~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~----~-~d~lv~~e~d~~~~-----v~~~~S~Dg~~l 299 (534)
. .....++|+||| .+++.... .....+|+.+++.++. . ....++++....+. ..+.+||||+.|
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r-~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRR-IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEES-STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCC-CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 1 123568999999 45555432 2233468888887653 1 11234444333331 146789999998
Q ss_pred E-EEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcC--CCCCccEEEEEeCCCCCCceEEecCC-
Q 009441 300 F-IASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS--DELFNSELLACPVDNTSETTVLIPHR- 375 (534)
Q Consensus 300 ~-i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~--~~~~~~~L~~~~~~~~~~~~~li~~~- 375 (534)
+ +.+...+...||+++++++. .+.|+...-.+...+..+++.+|+.++. ++.....|++++++.... ...+...
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~-~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~-~~~lt~~~ 411 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKD-CTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK-VTCLSCEL 411 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSS-CEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE-EEESSTTT
T ss_pred EEEEEcCCCceEEEEEECCCCc-eEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc-ceeecccc
Confidence 8 55555667899999998765 6667654322222234568999999986 444567899999864321 1122211
Q ss_pred --CCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCC
Q 009441 376 --ESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 376 --~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.......+.+.. .++++.+...+.+.+++++...
T Consensus 412 ~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~ 449 (740)
T 4a5s_A 412 NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVN 449 (740)
T ss_dssp STTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTT
T ss_pred CCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCC
Confidence 122355666654 4677777665667888888763
No 25
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.10 E-value=3e-09 Score=117.81 Aligned_cols=224 Identities=14% Similarity=0.102 Sum_probs=132.3
Q ss_pred CCceEEeecchhcCCCCcEEEEEEEECCCCCEEEEEEcCCC----CeEEEEEEEECCCCCeec-cccCCccceeEEccCC
Q 009441 173 PPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKG----DEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNE 247 (534)
Q Consensus 173 ~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~~d~~G----~E~~~l~v~dl~tg~~~~-~~i~~~~~~~~Ws~Dg 247 (534)
+..+.+++....+. ..+..++|||||++|||+.+.++ +...+|+++|+++|+.+. ..+.+....++|||||
T Consensus 46 g~~~~~~~~~~~~~----~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG 121 (719)
T 1z68_A 46 GQSYTILSNRTMKS----VNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG 121 (719)
T ss_dssp CCEEEEECHHHHHT----TTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST
T ss_pred CcEEEEEccccccc----cceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC
Confidence 45677777655431 12557899999999999987543 345799999999998732 1343334569999999
Q ss_pred -eEEEEEECCCCCCceEEEeecCCCCCCceEeeeecCCce----------------EEEEEEcCCCcEEEEEecCc----
Q 009441 248 -ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIY----------------SLGLQASESKKFLFIASESK---- 306 (534)
Q Consensus 248 -~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~----------------~v~~~~S~Dg~~l~i~~~~~---- 306 (534)
.|+|+. + ..||.+++.++.. .++......... ...+.+||||++|++.+.+.
T Consensus 122 ~~la~~~-~-----~~i~~~~~~~g~~-~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~ 194 (719)
T 1z68_A 122 SKLAYVY-Q-----NNIYLKQRPGDPP-FQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIP 194 (719)
T ss_dssp TCEEEEE-T-----TEEEEESSTTSCC-EECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSC
T ss_pred CEEEEEE-C-----CeEEEEeCCCCCc-EEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCc
Confidence 899885 2 3799998876532 122111111100 12578999999998876431
Q ss_pred ---------------------------ceeEEEEEeCCCCCc--eeEeee-----ccccee--EEEeeeCCEEEEEEcCC
Q 009441 307 ---------------------------ITRFVFYLDVSKPEE--LRVLTP-----RVVGVD--TAASHRGNHFFITRRSD 350 (534)
Q Consensus 307 ---------------------------~~~ev~~~d~~~~~~--~~~l~~-----~~~g~~--~~v~~~g~~lyi~tn~~ 350 (534)
....+++++++++.. ...+.. ...+.. ..+++++..++..++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~- 273 (719)
T 1z68_A 195 VIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKR- 273 (719)
T ss_dssp EEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEES-
T ss_pred eEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecc-
Confidence 234788999877531 112211 111111 2367775433333444
Q ss_pred CCCccEEEEEe----CCCCCCceEEec---CCCCceee-----eEEEeC--CEEEE-EEeeCCeeEEEEEECCC
Q 009441 351 ELFNSELLACP----VDNTSETTVLIP---HRESVKLQ-----DIQLFI--DHLAV-YEREGGLQKITTYRLPA 409 (534)
Q Consensus 351 ~~~~~~L~~~~----~~~~~~~~~li~---~~~~~~l~-----~~~~~~--~~lv~-~~~~~g~~~l~~~~l~~ 409 (534)
.....+|..++ +.+.... .+++ +..+..+. .+.+.. +.|++ ....+|..+|+++++++
T Consensus 274 ~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 274 VQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp STTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred ccCeEEEEEEcccCCCCCCceE-EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 34567898888 6432211 1332 12222233 455654 35555 45567888999999873
No 26
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.07 E-value=5.6e-08 Score=97.01 Aligned_cols=226 Identities=9% Similarity=0.068 Sum_probs=137.0
Q ss_pred EeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEECCCCCEEEEE
Q 009441 129 RQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYA 208 (534)
Q Consensus 129 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~ 208 (534)
++|.+++|.....+.....+++....+ +....++.. .+ +..+.|||||++|||+
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~-----------------g~~~~l~~~------~~---~~~~~wspdg~~l~~~ 121 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLET-----------------LSSKKILEA------KN---IRSLEWNEDSRKLLIV 121 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTT-----------------TEEEEEEEE------SE---EEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCC-----------------CceEEEEcC------CC---ccceeECCCCCEEEEE
Confidence 478899988776533334455544332 233444431 11 6788999999999999
Q ss_pred EcC-----------------CC-----CeEEEEEEEECCCCCe-eccccCCccceeEEccCCeEEEEEECCCC----C-C
Q 009441 209 EDT-----------------KG-----DEIYTVYVIDIETGTP-VGKPLVGVTASVEWAGNEALVYITMDEIL----R-P 260 (534)
Q Consensus 209 ~d~-----------------~G-----~E~~~l~v~dl~tg~~-~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~~~----r-~ 260 (534)
... +| ....+|+++|+++|+. .....+ ....+.|+||| ++|+...... . .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~ 199 (347)
T 2gop_A 122 GFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKF 199 (347)
T ss_dssp EECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCC
T ss_pred EccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEeccccccccccc
Confidence 753 12 2257899999999976 322113 33568999999 8888754321 1 4
Q ss_pred ceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-----ceeEEEEEeCCCCCceeEeeeccccee--
Q 009441 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-----ITRFVFYLDVSKPEELRVLTPRVVGVD-- 333 (534)
Q Consensus 261 ~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-----~~~ev~~~d~~~~~~~~~l~~~~~g~~-- 333 (534)
.+||..+ ++ +.+.+... ..... .||||++|++.+... ....||+++ +++ .+.+.+..++..
T Consensus 200 ~~l~~~d--~~--~~~~l~~~---~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~ 267 (347)
T 2gop_A 200 WDIYIWE--DG--KEEKMFEK---VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQ 267 (347)
T ss_dssp EEEEEEE--TT--EEEEEEEE---ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEE
T ss_pred ccEEEeC--CC--ceEEeccC---cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCC
Confidence 5788888 33 22334433 11222 399999998877543 246899999 333 555554422222
Q ss_pred -EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCee-EEEEEE
Q 009441 334 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQ-KITTYR 406 (534)
Q Consensus 334 -~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~-~l~~~~ 406 (534)
..++ + + +|+..+.+ ...+|+ ++ . .. ...+++. +..+..+.+.+ .+++.....+.+ +|+.++
T Consensus 268 ~~~~s-d-g-~~~~~~~~--~~~~l~-~~-~-g~-~~~~~~~--~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 268 AKIKD-G-K-VYFTLFEE--GSVNLY-IW-D-GE-IKPIAKG--RHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEET-T-E-EEEEEEET--TEEEEE-EE-S-SS-EEEEECS--SSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred ccEEc-C-c-EEEEEecC--CcEEEE-Ec-C-Cc-eEEEecC--CCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 1244 3 3 77766643 356888 77 3 22 2225544 33578888877 787777777765 888775
No 27
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.07 E-value=2.7e-08 Score=110.28 Aligned_cols=256 Identities=12% Similarity=0.016 Sum_probs=154.4
Q ss_pred ECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec--c--ccC--C--ccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 198 VSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--K--PLV--G--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 198 ~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~--~--~i~--~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
++|||++++|....+|.....|++++..+|+... + .+. + ....++||||| .++|...+......+||.+++
T Consensus 79 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 79 HFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEET
T ss_pred CEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence 3599999999999888877899999987775421 1 111 1 23568999999 898988654444458999999
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcc-------------eeEEEEEeCCCCC-ceeEeeecc--cc-
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-------------TRFVFYLDVSKPE-ELRVLTPRV--VG- 331 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~-------------~~ev~~~d~~~~~-~~~~l~~~~--~g- 331 (534)
.++... .....+.. ...+.|||||+.|++.+.... ...||+.++.++. .-+++.... .+
T Consensus 159 ~tg~~~-~~~~~~~~---~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~ 234 (710)
T 2xdw_A 159 DGAKEL-PDVLERVK---FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW 234 (710)
T ss_dssp TTTEEE-EEEEEEEC---SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred CCCCCC-cccccCcc---cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeE
Confidence 776321 11222211 124789999999998875433 3569999997764 223443332 11
Q ss_pred -eeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCC------CC-CceEEecCCCCceeeeEEEeCCEEEEEEeeCC-eeEE
Q 009441 332 -VDTAASHRGNHFFITRRSDELFNSELLACPVDN------TS-ETTVLIPHRESVKLQDIQLFIDHLAVYEREGG-LQKI 402 (534)
Q Consensus 332 -~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~------~~-~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g-~~~l 402 (534)
....++++|..|++.+......+..|+.+++++ +. ....+.+.. +.....+...++.|++....++ ..+|
T Consensus 235 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~~~~~~~l 313 (710)
T 2xdw_A 235 MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF-EGEYDYVTNEGTVFTFKTNRHSPNYRL 313 (710)
T ss_dssp EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-SSCEEEEEEETTEEEEEECTTCTTCEE
T ss_pred EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC-CcEEEEEeccCCEEEEEECCCCCCCEE
Confidence 123478999999988875222367899998864 32 111244333 3223345556788988877655 5689
Q ss_pred EEEECCCCCCcccccCCCceeeecCce-eeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCc
Q 009441 403 TTYRLPAVGEPLKSLQGGKSVEFIDPV-YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (534)
Q Consensus 403 ~~~~l~~~g~~~~~~~~~~~i~lp~~~-~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~ 466 (534)
+++++++ +.. .. .+.+. +... ..+..+... +++.+++++..-.. ..++.+|+.+|+
T Consensus 314 ~~~d~~~-~~~-~~---~~~l~-~~~~~~~~~~~~~~-~~~~lv~~~~~~g~-~~l~~~~~~~g~ 370 (710)
T 2xdw_A 314 INIDFTD-PEE-SK---WKVLV-PEHEKDVLEWVACV-RSNFLVLCYLHDVK-NTLQLHDLATGA 370 (710)
T ss_dssp EEEETTS-CCG-GG---CEEEE-CCCSSCEEEEEEEE-TTTEEEEEEEETTE-EEEEEEETTTCC
T ss_pred EEEeCCC-CCc-cc---ceecc-CCCCCCeEEEEEEE-cCCEEEEEEEECCE-EEEEEEECCCCC
Confidence 9999874 321 00 11221 2211 122211111 24566666654332 468888886665
No 28
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.01 E-value=1.8e-08 Score=102.17 Aligned_cols=247 Identities=9% Similarity=0.018 Sum_probs=136.4
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEEC------------------
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMD------------------ 255 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d------------------ 255 (534)
+.|||||++|||+...+ +|+++|+++|+.... ..+. .|+++| .++|...+
T Consensus 86 ~~~spdg~~l~~~~~~~-----~l~~~d~~~~~~~~~~~~~~-----~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~ 155 (396)
T 3c5m_A 86 GFISTDERAFFYVKNEL-----NLMKVDLETLEEQVIYTVDE-----EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSW 155 (396)
T ss_dssp CEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECCT-----TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ceECCCCCEEEEEEcCC-----cEEEEECCCCCcEEEEeccc-----ccCCCCCEEEeccCCccccccccccccCCCCcc
Confidence 57999999999998753 699999999876432 1111 155554 44432100
Q ss_pred -------CCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCcc---eeEEEEEeCCCCCceeE
Q 009441 256 -------EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKI---TRFVFYLDVSKPEELRV 324 (534)
Q Consensus 256 -------~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~~---~~ev~~~d~~~~~~~~~ 324 (534)
.......||.+++.++. ...+... ......+.++| ||+.|++.+.... ...||++++++.. ++.
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~--~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~ 230 (396)
T 3c5m_A 156 EKFAEFYHTNPTCRLIKVDIETGE--LEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRK 230 (396)
T ss_dssp HHHHHHHHTCCCEEEEEEETTTCC--EEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEE
T ss_pred eeeeeeccCCCcceEEEEECCCCc--EEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeE
Confidence 00233578998987653 2344432 22334578899 8998877765322 1589999987654 555
Q ss_pred eeeccccee---EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEe----
Q 009441 325 LTPRVVGVD---TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYER---- 395 (534)
Q Consensus 325 l~~~~~g~~---~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~---- 395 (534)
+.....+.. ..++++|..|++.++..+.....|+.+++.+... ..+.. .+. .. +.+.. +.+++...
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~-~~~--~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 231 IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMV-MPP--CS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEE-CCS--EE-EEEECSSSSEEEEEECCC-
T ss_pred eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeee-CCC--CC-CCccCCCCceEEEecCCcc
Confidence 554221211 2377889988888775333345599998865432 11222 112 22 44443 23433322
Q ss_pred ----------eCCeeEEEEEECCCCCCcccccCCCceeeecCcee---------eEeCCCCccCccEEEEEeccCCCCCe
Q 009441 396 ----------EGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY---------SIDPSESVFSSRILRFHYSSLRTPPS 456 (534)
Q Consensus 396 ----------~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~---------~i~~~~~~~~~~~l~~~~sS~~~P~~ 456 (534)
.++...|+++++.+ |+. +.+.-..... .......+.+++.+++..+. ..+..
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~-~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~ 376 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKA-KSA-------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGVPA 376 (396)
T ss_dssp ---------CCCCCCEEEEEETTT-TBC-------CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCE
T ss_pred eeeccccccccCCCCcEEEEeccc-Cce-------EEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-CCCce
Confidence 23456899999874 431 1222111000 01111123456666665543 34567
Q ss_pred EEEEECCCCcEEEEE
Q 009441 457 VYDYDMDMGISVLKK 471 (534)
Q Consensus 457 ~y~~d~~~~~~~~~~ 471 (534)
+|.+|+.+++.+++.
T Consensus 377 l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 377 IYIADVPESYKHLEH 391 (396)
T ss_dssp EEEEECCTTCC----
T ss_pred EEEEEEccccccccc
Confidence 999999888765554
No 29
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.96 E-value=2.1e-07 Score=101.71 Aligned_cols=209 Identities=6% Similarity=-0.092 Sum_probs=130.7
Q ss_pred EEEEEEEECCCCCEEEEEEcCC-----CCeEEEEEEEECCC------CCeeccc-c-CCccceeEEccCC-eEEEEEECC
Q 009441 191 YSVGCFQVSPDNKLVAYAEDTK-----GDEIYTVYVIDIET------GTPVGKP-L-VGVTASVEWAGNE-ALVYITMDE 256 (534)
Q Consensus 191 ~~l~~~~~SPDG~~LA~~~d~~-----G~E~~~l~v~dl~t------g~~~~~~-i-~~~~~~~~Ws~Dg-~l~Y~~~d~ 256 (534)
..+..+.|||||++|||+.... +....+|+++|+++ |+..... - ......++|+||| .|+|.+.+.
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECT
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCC
Confidence 4677889999999999997641 14458999999998 6543321 1 1224558999999 898988654
Q ss_pred CCC---CceEEEeecC-CCCC-CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc
Q 009441 257 ILR---PDKAWLHKLE-ADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG 331 (534)
Q Consensus 257 ~~r---~~~v~~~~lg-t~~~-~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g 331 (534)
... ..+||.+++. ++.. +.+.+.... ......+.+|+||+ +++.++......||++++++++ ++.+++....
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~ 286 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA-ATQLCRREEE 286 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC-EEESSCCSSB
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc-eeeccccccc
Confidence 322 3579999987 3410 123333321 22344578999999 5565554445689999987654 5555543222
Q ss_pred e----------eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeE-EEeCCEEEEEEeeCC-e
Q 009441 332 V----------DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDI-QLFIDHLAVYEREGG-L 399 (534)
Q Consensus 332 ~----------~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~-~~~~~~lv~~~~~~g-~ 399 (534)
. .+.+.+ ++++++..+. ...+|+.++++.... . .+..... .+..+ ...++.+++...... .
T Consensus 287 ~~~p~w~~~~~~~~~~~-~~~~~~~~~~---~~~~l~~~d~~~~~~-~-~l~~~~~-~~~~~~s~~~~~~~~~~~~~~~~ 359 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLA-NGLIAVVHGK---GAAVLGILDPESGEL-V-DAAGPWT-EWAATLTVSGTRAVGVAASPRTA 359 (662)
T ss_dssp SSCCCCSTTCCSEEECT-TSCEEEEEBS---SSCEEEEEETTTTEE-E-ECCSSCC-EEEEEEEEETTEEEEEEEETTEE
T ss_pred ccCccccccCceEeEeC-CCEEEEEEEc---CccEEEEEECCCCcE-E-EecCCCC-eEEEEEecCCCEEEEEEcCCCCC
Confidence 1 122323 5667777663 457899998764321 1 2332222 46666 666788777665544 4
Q ss_pred eEEEEEECCC
Q 009441 400 QKITTYRLPA 409 (534)
Q Consensus 400 ~~l~~~~l~~ 409 (534)
..|+++++.+
T Consensus 360 ~~i~~~d~~~ 369 (662)
T 3azo_A 360 YEVVELDTVT 369 (662)
T ss_dssp EEEEEEETTT
T ss_pred CEEEEEECCC
Confidence 5789998874
No 30
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.91 E-value=7.4e-08 Score=106.42 Aligned_cols=211 Identities=12% Similarity=0.071 Sum_probs=122.1
Q ss_pred EEEEECCCCCEEEEEEcCCC-----------------------------CeEEEEEEEECCCCCee-cccc-------CC
Q 009441 194 GCFQVSPDNKLVAYAEDTKG-----------------------------DEIYTVYVIDIETGTPV-GKPL-------VG 236 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G-----------------------------~E~~~l~v~dl~tg~~~-~~~i-------~~ 236 (534)
..+.|||||++|||+...++ +...+|+++|+++++.. .... ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 46899999999999975432 22468999999998742 2111 11
Q ss_pred ccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEeeeecCCceE----EEEEEcCCCcEEEEE-ecCcc----
Q 009441 237 VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYS----LGLQASESKKFLFIA-SESKI---- 307 (534)
Q Consensus 237 ~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~----v~~~~S~Dg~~l~i~-~~~~~---- 307 (534)
....++|+|||.+++...+.......|+.+++.++. -..++.+....+. ..+.+||||++|++. +....
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV--CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK 333 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC--EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc--ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcc
Confidence 234589999994443333322233578888987663 2334443322321 246899999998876 33333
Q ss_pred eeEEEEEe-CCCCC--ceeEeeeccccee--EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC--CCcee
Q 009441 308 TRFVFYLD-VSKPE--ELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR--ESVKL 380 (534)
Q Consensus 308 ~~ev~~~d-~~~~~--~~~~l~~~~~g~~--~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~--~~~~l 380 (534)
...||+++ ..++. ..+.+......+. ..++++|+.||+.++.+.....+|+.+++....... .+... ....+
T Consensus 334 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~l~~~~~~~~~~ 412 (723)
T 1xfd_A 334 FYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQ-CLSCDLVENCTY 412 (723)
T ss_dssp EEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCB-CSSTTSSSSCCC
T ss_pred eeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcc-eecccccCCCCe
Confidence 55899998 44431 0444543322222 247899999999887532245789988875421111 12211 12235
Q ss_pred eeEEEeC--CEEEEEEeeCCeeEEEEEEC
Q 009441 381 QDIQLFI--DHLAVYEREGGLQKITTYRL 407 (534)
Q Consensus 381 ~~~~~~~--~~lv~~~~~~g~~~l~~~~l 407 (534)
..+.+.+ ++|++.......+...+++.
T Consensus 413 ~~~~~spdg~~l~~~~~~~~~p~~~~~~~ 441 (723)
T 1xfd_A 413 FSASFSHSMDFFLLKCEGPGVPMVTVHNT 441 (723)
T ss_dssp CEEEECTTSSEEEEECCSSSSCCEEEEET
T ss_pred EEEEECCCCCEEEEEccCCCCCeEEEEEC
Confidence 5666654 46666655444443333443
No 31
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.90 E-value=1.7e-07 Score=104.37 Aligned_cols=252 Identities=14% Similarity=0.060 Sum_probs=150.9
Q ss_pred ECCCCCEEEEEEcCCCCeEEEEEEEECC---CCCeec--c--ccC--C--ccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 198 VSPDNKLVAYAEDTKGDEIYTVYVIDIE---TGTPVG--K--PLV--G--VTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 198 ~SPDG~~LA~~~d~~G~E~~~l~v~dl~---tg~~~~--~--~i~--~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
++|||++++|....+|.+...|++++.. +|+... + .+. + ...+++||||| .++|...+...+..+||.
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 4599999999999888888899999987 554321 1 111 1 23568999999 899988654333468999
Q ss_pred eecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcc-----------eeEEEEEeCCCCC-ceeEeeecccc--
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-----------TRFVFYLDVSKPE-ELRVLTPRVVG-- 331 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~-----------~~ev~~~d~~~~~-~~~~l~~~~~g-- 331 (534)
+++.++... .....+. .+..+.||+| +.|++.+.... ...||+.++.++. .-+++....+.
T Consensus 194 ~dl~tg~~~-~~~~~~~---~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 268 (741)
T 1yr2_A 194 VGVADGKPL-ADELKWV---KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPK 268 (741)
T ss_dssp EETTTCCEE-EEEEEEE---ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EECCCCCCC-CccCCCc---eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCe
Confidence 999876321 1111110 0124789999 99988875433 4479999987654 22344443221
Q ss_pred --eeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCC-C-ceEEecCCCCceeeeEEEeCCEEEEEEeeCC-eeEEEEEE
Q 009441 332 --VDTAASHRGNHFFITRRSDELFNSELLACPVDNTS-E-TTVLIPHRESVKLQDIQLFIDHLAVYEREGG-LQKITTYR 406 (534)
Q Consensus 332 --~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~-~-~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g-~~~l~~~~ 406 (534)
....++++|..+++.++.....+..|+.++++++. . ...+.+.. +.....+...++.|++..+.++ ..+|++++
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL-KAQWDFVDGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS-SSCEEEEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC-CceEEEEeccCCEEEEEECCCCCCCEEEEEe
Confidence 12347888999988887522245688888886541 1 12244433 3223334456788988887655 56899999
Q ss_pred CCCCC-CcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCc
Q 009441 407 LPAVG-EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (534)
Q Consensus 407 l~~~g-~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~ 466 (534)
++. + ... +.+ +|.....+..+ .+.++.++++...-.. ..++.+++.++.
T Consensus 348 ~~~-~~~~~------~~l-~~~~~~~l~~~--~~~~~~lv~~~~~dg~-~~l~~~~~~g~~ 397 (741)
T 1yr2_A 348 LSG-STPRF------DTV-VPESKDNLESV--GIAGNRLFASYIHDAK-SQVLAFDLDGKP 397 (741)
T ss_dssp CSS-SSCEE------EEE-ECCCSSEEEEE--EEEBTEEEEEEEETTE-EEEEEEETTSCE
T ss_pred CCC-Ccccc------EEE-ecCCCCeEEEE--EEECCEEEEEEEECCE-EEEEEEeCCCCc
Confidence 874 2 111 122 22222123221 2224556666544332 457888875443
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.89 E-value=4.1e-06 Score=84.75 Aligned_cols=241 Identities=12% Similarity=0.055 Sum_probs=144.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
+..+.+||||++|+++...+| +|+++|+.+|+.+.. ........++|+||| .+++...+ ...|+.+++.+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~----~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~----~~~v~v~d~~~ 105 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSN----DVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA----SSTLSVIDTTS 105 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGT----EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT----TTEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCC----eEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECC----CCEEEEEECCC
Confidence 567899999999988765444 799999999987653 222233569999999 56665432 24788888876
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~ 349 (534)
+. ....+.. ......+.+++||+++++.... ...|++.++.+++ .........+.. ..++++++.+|+....
T Consensus 106 ~~--~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 106 NT--VAGTVKT--GKSPLGLALSPDGKKLYVTNNG--DKTVSVINTVTKA-VINTVSVGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp TE--EEEEEEC--SSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTE-EEEEEECCSSEEEEEECTTSSEEEEEETT
T ss_pred Ce--EEEEEeC--CCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCc-EEEEEecCCCcceEEECCCCCEEEEEeCC
Confidence 52 2222322 1223457899999998775432 3478889987754 332232222222 3366778777765543
Q ss_pred CCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecC
Q 009441 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID 427 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~ 427 (534)
.+.|...++.+... ...++.. ..+..+.+.. +.|++.....+...|+++++.+ ++.+ ..+....
T Consensus 179 ----~~~v~~~d~~~~~~-~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~-~~~~------~~~~~~~ 244 (391)
T 1l0q_A 179 ----SMSISVIDTVTNSV-IDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT-NKIT------ARIPVGP 244 (391)
T ss_dssp ----TTEEEEEETTTTEE-EEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT-TEEE------EEEECCS
T ss_pred ----CCEEEEEECCCCeE-EEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCC-CeEE------EEEecCC
Confidence 25688888865321 1234432 2466777764 3666665432445788899874 4422 1232222
Q ss_pred ceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 428 PVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 428 ~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
....+ ..+.+++.++++.+. -..+..+|+.+++..
T Consensus 245 ~~~~~---~~s~dg~~l~~s~~~---d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 245 DPAGI---AVTPDGKKVYVALSF---XNTVSVIDTATNTIT 279 (391)
T ss_dssp SEEEE---EECTTSSEEEEEETT---TTEEEEEETTTTEEE
T ss_pred CccEE---EEccCCCEEEEEcCC---CCEEEEEECCCCcEE
Confidence 11112 223456666665432 368999999888753
No 33
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.89 E-value=1.2e-07 Score=109.56 Aligned_cols=181 Identities=10% Similarity=0.055 Sum_probs=113.5
Q ss_pred EEEEEEC-CCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CC-ccceeEEccCC-eEEEEEECCCCCCceEE-Eee
Q 009441 193 VGCFQVS-PDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VG-VTASVEWAGNE-ALVYITMDEILRPDKAW-LHK 267 (534)
Q Consensus 193 l~~~~~S-PDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~-~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~-~~~ 267 (534)
+..+.|| |||++||++.+ | +++++++.+++...... .+ ....++|+ || .++|.+. ..++| .++
T Consensus 298 v~~~~~S~pdG~~la~~~~--~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d 365 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVSR--G----QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYD 365 (1045)
T ss_dssp GGEEEEEECGGGCEEEEET--T----EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEE
T ss_pred cceeeecCCCCCEEEEEEc--C----EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEE
Confidence 5678999 99999999872 2 69999999887654211 22 23458999 98 7877763 34788 888
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce--eEEEeeeCCEEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFI 345 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~--~~~v~~~g~~lyi 345 (534)
+.++. ...+. . .......+.+||||++|++.... ..++++++++++ .+.+.....+. ...++++|..|++
T Consensus 366 ~~~~~--~~~l~-~-~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~tg~-~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 366 YRTGK--AEKFE-E-NLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLETGK-PTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp TTTCC--EEECC-C-CCCSEEEEEECTTSSEEEEEETT---SEEEEEETTTCC-EEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred CCCCC--ceEec-C-CccceeeeEECCCCCEEEEECCC---CeEEEEECCCCc-eEEeccCCCCCccceEECCCCCeEEE
Confidence 76552 12222 1 22334467899999999876543 479999998775 55555332222 2447889988877
Q ss_pred EEcCC-----CCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEee
Q 009441 346 TRRSD-----ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYERE 396 (534)
Q Consensus 346 ~tn~~-----~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~ 396 (534)
.+... ......|...++++.. ...+..... ....+.+.. .+|++....
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~-~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENS-HDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSS-BEEEEEECTTSCEEEEEESC
T ss_pred EecCccccccCCCCCeEEEEECCCCc--EEEeeCCCc-ccCCceEcCCCCEEEEEecc
Confidence 76531 1234678888886532 112222222 244566654 466665543
No 34
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.86 E-value=6.7e-07 Score=88.21 Aligned_cols=220 Identities=13% Similarity=0.104 Sum_probs=139.9
Q ss_pred EeCCEEEEEEecCCce---------EEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEEC
Q 009441 129 RQGSYYYYTRTLEGKE---------YVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVS 199 (534)
Q Consensus 129 ~~g~~~y~~~~~~g~~---------~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~S 199 (534)
..|+|+||.....+++ ..-+||...++ ++.++|.+ ..+ ..+|
T Consensus 62 ~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg-----------------~~~~~l~~------~~~------~~~s 112 (302)
T 3s25_A 62 ADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG-----------------HGSTVLDP------DPC------IYAS 112 (302)
T ss_dssp ECSSEEEEEEECC------CCSSCCSEEEEEEETTS-----------------CCCEEEEC------SCE------EEEE
T ss_pred EcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC-----------------CcceEeec------CCc------cEEE
Confidence 5799999998765432 22366666543 23344433 111 2678
Q ss_pred CCCCEEEEEE-cCCCCeEEEEEEEECCCCCeeccccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCCCCceE
Q 009441 200 PDNKLVAYAE-DTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (534)
Q Consensus 200 PDG~~LA~~~-d~~G~E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~l 277 (534)
++|++|+|+. +..| ...|+.+++++.+.... ..... ..|+++| .|||+.. . ..+||+.++.+. ..+.
T Consensus 113 ~~g~~Iy~~~~~~~~--~~~Iy~~~~dGs~~~~l-t~~~~--~~~~~~g~~iy~t~~---g-~~~Iy~~~l~g~--~~~~ 181 (302)
T 3s25_A 113 LIGNYIYYLHYDTQT--ATSLYRIRIDGEEKKKI-KNHYL--FTCNTSDRYFYYNNP---K-NGQLYRYDTASQ--SEAL 181 (302)
T ss_dssp EETTEEEEEEESSSS--CEEEEEEETTSCCCEEE-ESSCC--CCSEEETTEEEEECT---T-TCCEEEEETTTT--EEEE
T ss_pred EeCCEEEEEeecCCC--CceEEEEECCCCCeEEE-eCCCc--eEeeEECCEEEEEeC---C-CceEEEEECCCC--CEEE
Confidence 8999999986 3333 36799999986543221 11111 2345577 8988853 2 347999998655 2345
Q ss_pred eeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCCCCCccEE
Q 009441 278 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSEL 357 (534)
Q Consensus 278 v~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~~~~L 357 (534)
|+++ +. .. .+.|++++|+++..... ..|+.+++++.. .+.|+... .-.+++.++.||+.+.. . ...|
T Consensus 182 l~~~--~~-~~--~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~-~~~Lt~~~---~~~~~~~g~~Iy~~~~~-~--~~~i 248 (302)
T 3s25_A 182 FYDC--NC-YK--PVVLDDTNVYYMDVNRD-NAIVHVNINNPN-PVVLTEAN---IEHYNVYGSLIFYQRGG-D--NPAL 248 (302)
T ss_dssp EECS--CE-EE--EEEEETTEEEEEEGGGT-TEEEEECSSSCC-CEECSCSC---EEEEEEETTEEEEEECS-S--SCEE
T ss_pred EeCC--Cc-cc--eeeecCCEEEEEEcCCC-cEEEEEECCCCC-eEEEeCCC---cceEEECCCEEEEEECC-C--CcEE
Confidence 6642 22 22 24599999998764433 689999998865 45554321 23478899999987764 2 3789
Q ss_pred EEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECC
Q 009441 358 LACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 358 ~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 408 (534)
.+++++.... ..++.. .+..+.+++++|++.....+. |++++++
T Consensus 249 ~~~~~DG~~r--~~l~~~---~~~~i~i~~d~Iy~td~~~~~--i~~~~~d 292 (302)
T 3s25_A 249 CVVKNDGTGF--KELAKG---EFCNINVTSQYVYFTDFVSNK--EYCTSTQ 292 (302)
T ss_dssp EEEETTSCCC--EEEEES---CEEEEEECSSEEEEEETTTCC--EEEEESS
T ss_pred EEEECCCCcc--EEeeCC---ccceEEEeCCEEEEEECCCCe--EEEEECC
Confidence 9999975432 333333 255788899999999876663 8888877
No 35
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.85 E-value=7.3e-06 Score=80.74 Aligned_cols=226 Identities=7% Similarity=0.125 Sum_probs=145.1
Q ss_pred ceEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecchhcCCCCcEEEEEEEECCCCCEEE
Q 009441 127 PFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVA 206 (534)
Q Consensus 127 p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA 206 (534)
-...|+|+||.....+ .-+||.+.++ ...+.|-|-. ...++++|++|.
T Consensus 21 ~~~~g~~iy~~n~~d~---~~ly~~~~dg-----------------~~~~~l~~~~------------~~~i~~~g~~Iy 68 (302)
T 3s25_A 21 FCESDGEVFFSNTNDN---GRLYAMNIDG-----------------SNIHKLSNDT------------AMYINADKNYVY 68 (302)
T ss_dssp EEEETTEEEEEEGGGT---TEEEEEETTS-----------------CSCEEEEEEE------------EEEEEECSSEEE
T ss_pred EEEeCCEEEEEeCCCC---ceEEEEcCCC-----------------CCCEEccCCc------------eeeEEEcCCEEE
Confidence 3468999999865432 2488887653 2344554411 125689999999
Q ss_pred EEEcCCCC---------eEEEEEEEECCCCCeeccccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCCCCce
Q 009441 207 YAEDTKGD---------EIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 276 (534)
Q Consensus 207 ~~~d~~G~---------E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~ 276 (534)
|+....|. .++.|+.+++++++... +.... ...|+++| .|||+..... ....||+.++.... .+
T Consensus 69 y~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~--l~~~~-~~~~s~~g~~Iy~~~~~~~-~~~~Iy~~~~dGs~--~~ 142 (302)
T 3s25_A 69 YVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV--LDPDP-CIYASLIGNYIYYLHYDTQ-TATSLYRIRIDGEE--KK 142 (302)
T ss_dssp EEEECC------CCSSCCSEEEEEEETTSCCCEE--EECSC-EEEEEEETTEEEEEEESSS-SCEEEEEEETTSCC--CE
T ss_pred EEECCCCcccccceeccCCCeEEEEeCCCCcceE--eecCC-ccEEEEeCCEEEEEeecCC-CCceEEEEECCCCC--eE
Confidence 99887653 25789999999886432 32222 24788888 9999863211 23579999986442 33
Q ss_pred EeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCCCCCccE
Q 009441 277 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSE 356 (534)
Q Consensus 277 lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~~~~ 356 (534)
.|....- ..++++|++|+++.. ....||++++++.. .+.|... .....+.|+++.+|+.... .+++
T Consensus 143 ~lt~~~~------~~~~~~g~~iy~t~~--g~~~Iy~~~l~g~~-~~~l~~~--~~~~~~~P~g~~iy~t~~~---~~~~ 208 (302)
T 3s25_A 143 KIKNHYL------FTCNTSDRYFYYNNP--KNGQLYRYDTASQS-EALFYDC--NCYKPVVLDDTNVYYMDVN---RDNA 208 (302)
T ss_dssp EEESSCC------CCSEEETTEEEEECT--TTCCEEEEETTTTE-EEEEECS--CEEEEEEEETTEEEEEEGG---GTTE
T ss_pred EEeCCCc------eEeeEECCEEEEEeC--CCceEEEEECCCCC-EEEEeCC--CccceeeecCCEEEEEEcC---CCcE
Confidence 4433211 235789999998755 45679999998764 3444432 1112255789999986643 2379
Q ss_pred EEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 357 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 357 L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
|++++++... ..++... .+..+++.++.|+......+ .+|+.++++ |.
T Consensus 209 I~~~~ldG~~--~~~Lt~~---~~~~~~~~g~~Iy~~~~~~~-~~i~~~~~D--G~ 256 (302)
T 3s25_A 209 IVHVNINNPN--PVVLTEA---NIEHYNVYGSLIFYQRGGDN-PALCVVKND--GT 256 (302)
T ss_dssp EEEECSSSCC--CEECSCS---CEEEEEEETTEEEEEECSSS-CEEEEEETT--SC
T ss_pred EEEEECCCCC--eEEEeCC---CcceEEECCCEEEEEECCCC-cEEEEEECC--CC
Confidence 9999997543 2233322 35678888899976644333 789999998 54
No 36
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.85 E-value=1.7e-07 Score=103.56 Aligned_cols=255 Identities=12% Similarity=0.053 Sum_probs=147.8
Q ss_pred EECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec--c--cc-CC---ccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--K--PL-VG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~--~--~i-~~---~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.++|||++++|....+|.+...|++++..+|+... + .+ ++ ....++||||| .++|+..........|+.++
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 35699999999999888888899999988775432 1 11 11 24568999999 89999865444456899999
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcc----------eeEEEEEeCCCCC-ceeEeeecccc--e--
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI----------TRFVFYLDVSKPE-ELRVLTPRVVG--V-- 332 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~----------~~ev~~~d~~~~~-~~~~l~~~~~g--~-- 332 (534)
+.++......... +..+ ..+.||+||+.|++.+.... ...||+.++.++. .-+++....+. .
T Consensus 154 l~tg~~~~~~~~~--~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 154 VDSGEWSKVDVIE--GGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp TTTCCBCSSCCBS--CCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred CCCCCCcCCcccC--cccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 9776421000111 1111 35789999999998875432 4579999998765 23445443221 1
Q ss_pred eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeC-CeeEEEEEECCCCC
Q 009441 333 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREG-GLQKITTYRLPAVG 411 (534)
Q Consensus 333 ~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~-g~~~l~~~~l~~~g 411 (534)
...++++|..+++.++. +....+|+.++..+.. ...+.+.... .....+..+.+++....+ +..+|+++++++ +
T Consensus 231 ~~~~SpDG~~l~~~~~~-~~~~~~l~~~~~~~~~-~~~l~~~~~~--~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~-~ 305 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILR-GWSENDVYWKRPGEKD-FRLLVKGVGA--KYEVHAWKDRFYVLTDEGAPRQRVFEVDPAK-P 305 (695)
T ss_dssp EEEECTTSCCEEEEEEE-TTTEEEEEEECTTCSS-CEEEEECSSC--CEEEEEETTEEEEEECTTCTTCEEEEEBTTB-C
T ss_pred EEEECCCCCEEEEEEeC-CCCceEEEEEcCCCCc-eEEeecCCCc--eEEEEecCCcEEEEECCCCCCCEEEEEeCCC-C
Confidence 23478889888887764 3245678777654322 1224443322 223333444466665543 356899999874 3
Q ss_pred CcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCc
Q 009441 412 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (534)
Q Consensus 412 ~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~ 466 (534)
.. .. .+.+.-+.....+..+. +.++.+++++..-.. .+++.+++.++.
T Consensus 306 ~~-~~---~~~l~~~~~~~~l~~~~--~~~~~lv~~~~~dg~-~~l~~~~~~g~~ 353 (695)
T 2bkl_A 306 AR-AS---WKEIVPEDSSASLLSVS--IVGGHLSLEYLKDAT-SEVRVATLKGKP 353 (695)
T ss_dssp SG-GG---CEEEECCCSSCEEEEEE--EETTEEEEEEEETTE-EEEEEEETTCCE
T ss_pred Cc-cC---CeEEecCCCCCeEEEEE--EECCEEEEEEEECCE-EEEEEEeCCCCe
Confidence 31 00 01221111111222211 224556666544332 467888875443
No 37
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=1.5e-06 Score=83.51 Aligned_cols=233 Identities=14% Similarity=0.069 Sum_probs=137.2
Q ss_pred eEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecCC-CCCCceEeeeecCCceEEEEE
Q 009441 215 EIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA-DQSNDICLYHEKDDIYSLGLQ 291 (534)
Q Consensus 215 E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt-~~~~d~lv~~e~d~~~~v~~~ 291 (534)
...+|+++|+.+++.... ...+....++|+||| .+++.. + ..|+.+++.+ .. ...++..........+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~-----~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-E-----GLLYRLSLAGDPS--PEKVDTGFATICNNDHG 91 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-T-----TEEEEEESSSCCS--CEECCCTTCCCBCSCCE
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-C-----CeEEEEeCCCCCC--ceEeccccccccccceE
Confidence 357899999999876532 123334569999999 666653 2 3789999876 42 23344322212223478
Q ss_pred EcCCCcEEEEEecCc-ceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE
Q 009441 292 ASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 370 (534)
Q Consensus 292 ~S~Dg~~l~i~~~~~-~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~ 370 (534)
+++||++|++..... ....||.+++.+.. .+.+..........++++|..|++....+ ...+|+.+++..... .
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~l~~~~~~~~~~--~ 166 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRD--QVFDIYSMDIDSGVE--T 166 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEET--TEEEEEEEETTTCCE--E
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCC--CceEEEEEECCCCcc--e
Confidence 999999998876433 45789999987654 44444332211234778888888766542 346888888754321 1
Q ss_pred EecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEe
Q 009441 371 LIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHY 448 (534)
Q Consensus 371 li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~ 448 (534)
.+.... ..+..+.+.+ ..|++....++..+|+.+++. +..+. .+. .....+.....+.+++.+++..
T Consensus 167 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~--~~~~~------~~~--~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 167 RLTHGE-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD--GSSVE------RIT--DSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp ECCCSS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--SSCEE------ECC--CCSEEEEEEEECTTSSEEEEEE
T ss_pred EcccCC-CccccceECCCCCEEEEEecCCCCccEEEECCC--CCCcE------EEe--cCCcccCCeEECCCCCEEEEEE
Confidence 222222 2467788765 356766666787888888876 33221 121 1111122122234566665554
Q ss_pred ccCC-------CCCeEEEEECCCCcEEEEE
Q 009441 449 SSLR-------TPPSVYDYDMDMGISVLKK 471 (534)
Q Consensus 449 sS~~-------~P~~~y~~d~~~~~~~~~~ 471 (534)
.... ....++.+|+.+++...+.
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred cCCCCCcccccCceEEEEEecCCCCceeee
Confidence 3321 2357999999888755443
No 38
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.83 E-value=2.9e-07 Score=101.68 Aligned_cols=206 Identities=10% Similarity=0.069 Sum_probs=131.0
Q ss_pred EEEEECCCCCEEEEEEcCCC--------CeEEEEEEEECCCCCeecc---ccCC----ccceeEEccCC-eEEEEEECCC
Q 009441 194 GCFQVSPDNKLVAYAEDTKG--------DEIYTVYVIDIETGTPVGK---PLVG----VTASVEWAGNE-ALVYITMDEI 257 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G--------~E~~~l~v~dl~tg~~~~~---~i~~----~~~~~~Ws~Dg-~l~Y~~~d~~ 257 (534)
..+.|| ||+.|+|+..... ....+|+++++.++..... ..+. ...++.|+||| .++++.....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 457899 9999999998743 3356899999988753111 1111 23458899999 7877765332
Q ss_pred CCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-ceeEEEEEeCCCCC--ceeEeeecccceeE
Q 009441 258 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPE--ELRVLTPRVVGVDT 334 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-~~~ev~~~d~~~~~--~~~~l~~~~~g~~~ 334 (534)
...+||..++.++..+-+.+....+..+. .++++|++|++.++.. .+..|+.++++++. .++.+++......
T Consensus 257 -~~~~i~~~d~~~~~~~~~~l~~~~~~~~~---~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~- 331 (693)
T 3iuj_A 257 -SGNRLYVKDLSQENAPLLTVQGDLDADVS---LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL- 331 (693)
T ss_dssp -SCCEEEEEETTSTTCCCEEEECSSSSCEE---EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-
T ss_pred -CCcEEEEEECCCCCCceEEEeCCCCceEE---EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-
Confidence 23689999987654333344333232232 2678888888877653 35689999998765 4677887666555
Q ss_pred EEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEe--CCEEEEEEeeC-CeeEEEEEECCC
Q 009441 335 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREG-GLQKITTYRLPA 409 (534)
Q Consensus 335 ~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~-g~~~l~~~~l~~ 409 (534)
.+++++++|++....+ ...+|..++++... .. .++-.....+..+... ++.|++..... .-..|+.+++.+
T Consensus 332 ~~s~~g~~lv~~~~~~--g~~~l~~~d~~g~~-~~-~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVD--ATARVEQFDYEGKR-VR-EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEEETTEEEEEEEET--TEEEEEEECTTSCE-EE-EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred EEEEECCEEEEEEEEC--CeeEEEEEECCCCe-eE-EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 7889999998888753 34678888876321 11 2322222234444443 34676665542 235788888864
No 39
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.80 E-value=3.1e-07 Score=99.01 Aligned_cols=197 Identities=9% Similarity=-0.024 Sum_probs=124.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-C-CccceeEEccCCeEEEEEEC-CCCCCceEEEeec-
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-V-GVTASVEWAGNEALVYITMD-EILRPDKAWLHKL- 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~-~~~~~~~Ws~Dg~l~Y~~~d-~~~r~~~v~~~~l- 268 (534)
+..+.+||||++|||+.+.+|. +.|+++++|+.....- . +....++|+|| +++|++.. ......++|..++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~----~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGS----VNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTE----EEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hheeecCCCCCeEEEEEccCCc----eeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 6677899999999999876663 4455567776654211 2 12345899999 89998863 2333457888887
Q ss_pred -CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEE
Q 009441 269 -EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITR 347 (534)
Q Consensus 269 -gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~t 347 (534)
... . ..+... +... ...+|+||+.+++.+.+.....+| ++++++ .+.+..... ....++++|..+++.+
T Consensus 99 ~~g~--~-~~l~~~--~~~~-~~~~s~dg~~~~~~s~~~~~~~l~--d~~~g~-~~~l~~~~~-~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 99 RPGE--E-QRLEAV--KPMR-ILSGVDTGEAVVFTGATEDRVALY--ALDGGG-LRELARLPG-FGFVSDIRGDLIAGLG 168 (582)
T ss_dssp STTC--C-EECTTS--CSBE-EEEEEECSSCEEEEEECSSCEEEE--EEETTE-EEEEEEESS-CEEEEEEETTEEEEEE
T ss_pred CCCc--c-ccccCC--CCce-eeeeCCCCCeEEEEecCCCCceEE--EccCCc-EEEeecCCC-ceEEECCCCCEEEEEE
Confidence 332 1 222211 1122 247899998877766555444455 666654 555554322 3445889999999887
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEEeeCCeeEEEEEECCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+. ......|+.+++++... . .+..... .+..+.+.+| .|+ ....+|..+|+++++++
T Consensus 169 ~~-~~~~~~i~~~d~~~g~~-~-~l~~~~~-~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 169 FF-GGGRVSLFTSNLSSGGL-R-VFDSGEG-SFSSASISPGMKVTA-GLETAREARLVTVDPRD 227 (582)
T ss_dssp EE-ETTEEEEEEEETTTCCC-E-EECCSSC-EEEEEEECTTSCEEE-EEECSSCEEEEEECTTT
T ss_pred Ec-CCCCeEEEEEcCCCCCc-e-EeecCCC-ccccceECCCCCEEE-EccCCCeeEEEEEcCCC
Confidence 74 33346799999875432 2 2333333 4677888754 555 55667777899999984
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.75 E-value=1.1e-05 Score=80.06 Aligned_cols=246 Identities=11% Similarity=0.010 Sum_probs=142.2
Q ss_pred EEEEEECCCCCEEEEEEcCCC--CeEEEEEEEECCCCCeecc-ccCCccceeEEccCCe-EEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKG--DEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEA-LVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G--~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg~-l~Y~~~d~~~r~~~v~~~~l 268 (534)
+..+.+||||++|+++...+. .....|+++|+++++.+.. ........++|++||. +|.+. . ....|+.+++
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~-~---~~~~v~~~d~ 118 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGN-T---VNSAVTAIDA 118 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEE-T---TTTEEEEEET
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEe-c---CCCEEEEEeC
Confidence 456789999999966654321 1246899999999987653 2222234589999994 55443 2 1247888888
Q ss_pred CCCCCCceEeeeecC--------CceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeee-cccce-eEEEee
Q 009441 269 EADQSNDICLYHEKD--------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGV-DTAASH 338 (534)
Q Consensus 269 gt~~~~d~lv~~e~d--------~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~-~~~g~-~~~v~~ 338 (534)
.++.. ...+.... +..-..+.+++||+++++.... ....|+++|+.+++ .....+ ..... ...+++
T Consensus 119 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 119 KTGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-KESVIWVVDGGNIK-LKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TTCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-SSCEEEEEETTTTE-EEEEECCCCTTCCCCEEET
T ss_pred CCCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-CCceEEEEcCCCCc-eEEEecCCCCccceEEECC
Confidence 76531 11221111 1112357899999998876532 24578999988764 322222 11111 234678
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecC---CCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCc
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH---RESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEP 413 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~---~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~ 413 (534)
+|+.+|+... +..|..+++.+... .+.++. .+...+.++.+.+ ++|++.... ...|+++++.+ ++.
T Consensus 195 dg~~l~~~~~-----~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~-~~~ 265 (353)
T 3vgz_A 195 EGKRLYTTNA-----DGELITIDTADNKI-LSRKKLLDDGKEHFFINISLDTARQRAFITDSK--AAEVLVVDTRN-GNI 265 (353)
T ss_dssp TTTEEEEECT-----TSEEEEEETTTTEE-EEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--SSEEEEEETTT-CCE
T ss_pred CCCEEEEEcC-----CCeEEEEECCCCeE-EEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--CCEEEEEECCC-CcE
Confidence 8888776532 25788888765432 222222 1222456677764 467666543 34688899875 553
Q ss_pred ccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 414 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 414 ~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
+ ..+..+... .+ ..+.+++.++++-.. -..++.+|+.+++..
T Consensus 266 ~------~~~~~~~~~-~~---~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 266 L------AKVAAPESL-AV---LFNPARNEAYVTHRQ---AGKVSVIDAKSYKVV 307 (353)
T ss_dssp E------EEEECSSCC-CE---EEETTTTEEEEEETT---TTEEEEEETTTTEEE
T ss_pred E------EEEEcCCCc-eE---EECCCCCEEEEEECC---CCeEEEEECCCCeEE
Confidence 2 234443321 11 123456666665422 368999999888743
No 41
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.70 E-value=4e-06 Score=93.38 Aligned_cols=208 Identities=11% Similarity=0.042 Sum_probs=124.1
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc---C--CccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---V--GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i---~--~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
+.+.|||||+.|+|+.........+|++.++.+++.....+ + ....++.|+||| .|+|+.... ....||..+
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~l~~~d 301 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP--ETAEVHLLD 301 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS--SCEEEEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC--CCceEEEEE
Confidence 46799999999999977544445799999998875321111 1 233458899999 888887532 246899999
Q ss_pred cCCCCCCc--eEeeee-cCCceEEEEEEcCCCcEEEEEecCc--ceeEEEEEeCCCCCceeE-eeeccccee-EEEeeeC
Q 009441 268 LEADQSND--ICLYHE-KDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRV-LTPRVVGVD-TAASHRG 340 (534)
Q Consensus 268 lgt~~~~d--~lv~~e-~d~~~~v~~~~S~Dg~~l~i~~~~~--~~~ev~~~d~~~~~~~~~-l~~~~~g~~-~~v~~~g 340 (534)
+.++..+- +.+... .++.|.+ .+ .+|+.|++.++.. ....||.++++++..++. +++...+.. ..++..+
T Consensus 302 ~~~~~~~~~~~~l~~~~~~~~~s~--~~-~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~ 378 (751)
T 2xe4_A 302 LRKGNAHNTLEIVRPREKGVRYDV--QM-HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS 378 (751)
T ss_dssp SSSCTTCCCEEESSCCCTTCCEEE--EE-ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS
T ss_pred CCCCCCCceeEEeecCCCCceEEE--ee-eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC
Confidence 87653233 344432 2333332 22 2477777777654 567899999875323555 555433322 2355668
Q ss_pred CEEEEEEcCCCCCccEEEEEeC-------CCCCCceEEecCCCCceeeeEE------EeCCEEEEEEeeCCe-eEEEEEE
Q 009441 341 NHFFITRRSDELFNSELLACPV-------DNTSETTVLIPHRESVKLQDIQ------LFIDHLAVYEREGGL-QKITTYR 406 (534)
Q Consensus 341 ~~lyi~tn~~~~~~~~L~~~~~-------~~~~~~~~li~~~~~~~l~~~~------~~~~~lv~~~~~~g~-~~l~~~~ 406 (534)
+.|++..+.+ ...+|..+++ ++..... .++-.......++. ..++.+++....... +.++.++
T Consensus 379 ~~lv~~~~~~--g~~~l~~~dl~~~~~~~~~g~~~~-~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d 455 (751)
T 2xe4_A 379 NYLVVAGRRA--GLTRIWTMMADSQDGVFKAGTGLR-EVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVS 455 (751)
T ss_dssp SEEEEEEEET--TEEEEEEEECCTTTSCCCTTTCCE-ECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEEEeC--CEEEEEEEecccccccccCCccce-EECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 8998888753 3467888886 3221011 12211111223332 123567666665444 4788888
Q ss_pred CCC
Q 009441 407 LPA 409 (534)
Q Consensus 407 l~~ 409 (534)
+.+
T Consensus 456 ~~~ 458 (751)
T 2xe4_A 456 PQD 458 (751)
T ss_dssp TTT
T ss_pred CCC
Confidence 764
No 42
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.67 E-value=1.6e-05 Score=78.72 Aligned_cols=225 Identities=14% Similarity=0.106 Sum_probs=127.7
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC----------ccceeEEccCC-eEEEEEECCCCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG----------VTASVEWAGNE-ALVYITMDEILRP 260 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~----------~~~~~~Ws~Dg-~l~Y~~~d~~~r~ 260 (534)
...+.+||||++|+++...+| .|+++|+++|+.+.. .... ....++|+||| .+|...... .
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~ 163 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNS----AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK---E 163 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTT----EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS---S
T ss_pred cceEEECCCCCEEEEEecCCC----EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC---C
Confidence 345789999999888766444 799999999987542 1211 02448999999 555444221 3
Q ss_pred ceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc---ee--EE
Q 009441 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VD--TA 335 (534)
Q Consensus 261 ~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g---~~--~~ 335 (534)
..|+.+++.+.. -...+.... .....+.+++||+++++... ...++++|+.+++....+.....+ .. ..
T Consensus 164 ~~i~~~d~~~~~--~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 164 SVIWVVDGGNIK--LKTAIQNTG-KMSTGLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGKEHFFINIS 237 (353)
T ss_dssp CEEEEEETTTTE--EEEEECCCC-TTCCCCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE
T ss_pred ceEEEEcCCCCc--eEEEecCCC-CccceEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCCCcccceEE
Confidence 478888887652 112222111 11224678999999887643 457889998876411122111111 11 23
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCc
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEP 413 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~ 413 (534)
++++|+.+|+.... ...|..+++.+.... ..++.... ..+.+.+ +++++....++ .|.++++.+ ++.
T Consensus 238 ~s~dg~~l~~~~~~----~~~v~~~d~~~~~~~-~~~~~~~~---~~~~~s~dg~~l~v~~~~~~--~v~~~d~~~-~~~ 306 (353)
T 3vgz_A 238 LDTARQRAFITDSK----AAEVLVVDTRNGNIL-AKVAAPES---LAVLFNPARNEAYVTHRQAG--KVSVIDAKS-YKV 306 (353)
T ss_dssp EETTTTEEEEEESS----SSEEEEEETTTCCEE-EEEECSSC---CCEEEETTTTEEEEEETTTT--EEEEEETTT-TEE
T ss_pred ECCCCCEEEEEeCC----CCEEEEEECCCCcEE-EEEEcCCC---ceEEECCCCCEEEEEECCCC--eEEEEECCC-CeE
Confidence 67788888765532 357888888654321 22332211 2355543 46777665454 688888875 443
Q ss_pred ccccCCCceeeecCceeeEeCCCCccCccEEEEEecc
Q 009441 414 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 450 (534)
Q Consensus 414 ~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS 450 (534)
+ ..+..+.....+ ..+.+++.++++..+
T Consensus 307 ~------~~~~~~~~~~~~---~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 307 V------KTFDTPTHPNSL---ALSADGKTLYVSVKQ 334 (353)
T ss_dssp E------EEEECCSEEEEE---EECTTSCEEEEEEEC
T ss_pred E------EEEecCCCCCeE---EEcCCCCEEEEEEcc
Confidence 2 233333221112 233456677777665
No 43
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.57 E-value=1.4e-05 Score=78.55 Aligned_cols=242 Identities=13% Similarity=0.077 Sum_probs=132.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC------ccceeEEccCC-eEEEEEEC----CCC--
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG------VTASVEWAGNE-ALVYITMD----EIL-- 258 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~------~~~~~~Ws~Dg-~l~Y~~~d----~~~-- 258 (534)
+..+.+||||++|+++...+| +|+++|+++|+.+.. .... ....++|+||| .+|+.... ...
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSE----SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTT----EEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred ccceEEcCCCCEEEEEeCCCC----eEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 445789999999988766443 699999999987642 2221 23458999999 55555311 011
Q ss_pred -CCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc-ceeEEE
Q 009441 259 -RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAA 336 (534)
Q Consensus 259 -r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~-g~~~~v 336 (534)
....|+.+++.+.. ....+.... ....+.+++||++|++. ...++++++.+++ .....+... .....+
T Consensus 112 ~~~~~i~v~d~~~~~--~~~~~~~~~--~~~~~~~s~dg~~l~~~-----~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~ 181 (337)
T 1pby_B 112 VQPTRVALYDAETLS--RRKAFEAPR--QITMLAWARDGSKLYGL-----GRDLHVMDPEAGT-LVEDKPIQSWEAETYA 181 (337)
T ss_dssp ECCCEEEEEETTTTE--EEEEEECCS--SCCCEEECTTSSCEEEE-----SSSEEEEETTTTE-EEEEECSTTTTTTTBC
T ss_pred ccCceEEEEECCCCc--EEEEEeCCC--CcceeEECCCCCEEEEe-----CCeEEEEECCCCc-EeeeeeccccCCCcee
Confidence 23578888886542 112222111 11236789999998886 2468999987754 222222111 011235
Q ss_pred eeeCCEEEEEEcCCC-------------------CCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEEe
Q 009441 337 SHRGNHFFITRRSDE-------------------LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYER 395 (534)
Q Consensus 337 ~~~g~~lyi~tn~~~-------------------~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~~ 395 (534)
+++|..+|+.....+ ...+.|..+++.+......-+... ...+..+.+.++ +|++.
T Consensus 182 s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~-- 258 (337)
T 1pby_B 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM-DVFYFSTAVNPAKTRAFGA-- 258 (337)
T ss_dssp CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC-SSCEEEEEECTTSSEEEEE--
T ss_pred CCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC-CCceeeEEECCCCCEEEEe--
Confidence 566665554322100 011256777776543221111111 123556677653 56655
Q ss_pred eCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 396 EGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 396 ~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
...|+++++.+ ++.+ ..+..+.....+ ..+.+++.+++. +. ...+..+|+++++..
T Consensus 259 ---~~~v~~~d~~~-~~~~------~~~~~~~~~~~~---~~s~dg~~l~~~--~~--~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 259 ---YNVLESFDLEK-NASI------KRVPLPHSYYSV---NVSTDGSTVWLG--GA--LGDLAAYDAETLEKK 314 (337)
T ss_dssp ---ESEEEEEETTT-TEEE------EEEECSSCCCEE---EECTTSCEEEEE--SB--SSEEEEEETTTCCEE
T ss_pred ---CCeEEEEECCC-CcCc------ceecCCCceeeE---EECCCCCEEEEE--cC--CCcEEEEECcCCcEE
Confidence 24788999874 4422 223332221122 223456666654 22 478999999888753
No 44
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.53 E-value=0.00012 Score=71.83 Aligned_cols=199 Identities=13% Similarity=0.076 Sum_probs=111.8
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCe-ecc-ccCCccce-eEEccCCeEEEEEECCCCCCceEEEeecCCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGK-PLVGVTAS-VEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~-~~~-~i~~~~~~-~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~ 271 (534)
.+.+||||++|+++...++ .|+++|+++++. ... ........ ++|+|||..+|+.. .......|+.+++.+.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQ----TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVT-GLNHPFNMQSYSFLKN 118 (331)
T ss_dssp EEEECSSSCEEEEEESTTC----EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECC-CSSSSCEEEEEETTTT
T ss_pred eEEEcCCCCEEEEEeCCCC----eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEec-CCCCcccEEEEECCCC
Confidence 7899999998877765433 799999999986 332 11122234 89999995445432 2222237888888655
Q ss_pred CCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCce----eEeeeccccee-EEEeeeCCEEEEE
Q 009441 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL----RVLTPRVVGVD-TAASHRGNHFFIT 346 (534)
Q Consensus 272 ~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~----~~l~~~~~g~~-~~v~~~g~~lyi~ 346 (534)
. -...+... .....+.++|||+++++....... .+++.+++....+ ....+...+.. ..++++|+.+|+.
T Consensus 119 ~--~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 119 K--FISTIPIP--YDAVGIAISPNGNGLILIDRSSAN-TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp E--EEEEEECC--TTEEEEEECTTSSCEEEEEETTTT-EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred C--eEEEEECC--CCccceEECCCCCEEEEEecCCCc-eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 2 11222221 112457899999998776543222 1444444332111 11122212222 3367888888776
Q ss_pred EcCCCCCccEEEEEeCCCCCCce-E-EecCCCCceeeeEEEeCC--EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 347 RRSDELFNSELLACPVDNTSETT-V-LIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~-~-li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
... ...|...++.+..... . .++.. .....+.+.++ +|++... +...|.++++.+ |+
T Consensus 194 ~~~----~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~-~~ 254 (331)
T 3u4y_A 194 NLI----GNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLS-GT 254 (331)
T ss_dssp ETT----TTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECS--SEEEEEEEETTT-TE
T ss_pred eCC----CCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEc--CCCEEEEEECCC-Cc
Confidence 643 2467777876544211 1 34433 23566777653 5655543 445688899875 44
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.51 E-value=2.9e-05 Score=78.14 Aligned_cols=250 Identities=13% Similarity=0.123 Sum_probs=125.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCe-EEEEEEEECCCCCeeccc----c--CCccceeEEccCCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDE-IYTVYVIDIETGTPVGKP----L--VGVTASVEWAGNEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E-~~~l~v~dl~tg~~~~~~----i--~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+++||||++||-+.+....- ...+++++..+|+..... . ......++|+||+.++....+ ..|.
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~d-----g~v~ 118 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDS-----GAVE 118 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETT-----SCEE
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECC-----CEEE
Confidence 588899999999999876543211 257999999888654321 1 112345899999966554432 2466
Q ss_pred EeecCCCCCCceEeeee-cCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCE
Q 009441 265 LHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH 342 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e-~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~ 342 (534)
.+++.++......-+.. ........+.++|||++|+..+.+ ..|.+.++.++.....+......+. ..+.++++.
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 66765543211111221 112334467899999998754433 2466777776541222222222222 124455555
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGG 420 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~ 420 (534)
+++....+ +.|...|+..+.....+........+..+.+.+ +.+++....++ .|+++++.. ++.+
T Consensus 196 ~~~s~~~d----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~--~i~~wd~~~-~~~~------ 262 (357)
T 4g56_B 196 IFLSCGED----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG--NVSLVNIKN-PDSA------ 262 (357)
T ss_dssp CEEEEETT----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS--CEEEEESSC-GGGC------
T ss_pred eeeeeccC----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc--ceeEEECCC-CcEe------
Confidence 54444332 345556665443222111112233467777764 45666666666 466778874 4422
Q ss_pred ceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 421 KSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 421 ~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
+.+..... .+......+++..+.++.+. -+++..||+.+++.
T Consensus 263 ~~~~~~~~--~v~~l~~sp~~~~~lasgs~---D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 263 QTSAVHSQ--NITGLAYSYHSSPFLASISE---DCTVAVLDADFSEV 304 (357)
T ss_dssp EEECCCSS--CEEEEEECSSSSCCEEEEET---TSCEEEECTTSCEE
T ss_pred EEEeccce--eEEEEEEcCCCCCEEEEEeC---CCEEEEEECCCCcE
Confidence 12221111 12111122334444444332 25688889888764
No 46
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.50 E-value=0.00012 Score=71.85 Aligned_cols=245 Identities=12% Similarity=0.048 Sum_probs=130.9
Q ss_pred EECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCc
Q 009441 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSND 275 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d 275 (534)
.++++++++..+...+| +|+++|+++|+.+.. ........++|+|||..+|+.... ..+|+.+++.++...
T Consensus 4 ~~~~~~~~~~v~~~~~~----~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~i~~~d~~~~~~~- 75 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLR----RISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDF---CQTLVQIETQLEPPK- 75 (331)
T ss_dssp ---CCCCEEEEEEGGGT----EEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEEST---TCEEEEEECSSSSCE-
T ss_pred eEcCCCCEEEEEecCCC----eEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCC---CCeEEEEECCCCcee-
Confidence 45677777666655443 799999999987643 222221268999999544444321 238999888765320
Q ss_pred eEeeee-cCCceEEE-EEEcCCCcEEEEEecCc-ceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcCCC
Q 009441 276 ICLYHE-KDDIYSLG-LQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDE 351 (534)
Q Consensus 276 ~lv~~e-~d~~~~v~-~~~S~Dg~~l~i~~~~~-~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~~~ 351 (534)
...... ..+ .. +.+++||++|+ ..... ....|+++++++++ .....+..... ...++++|+.+|+....
T Consensus 76 ~~~~~~~~~~---~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~-- 148 (331)
T 3u4y_A 76 VVAIQEGQSS---MADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNK-FISTIPIPYDAVGIAISPNGNGLILIDRS-- 148 (331)
T ss_dssp EEEEEECSSC---CCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTE-EEEEEECCTTEEEEEECTTSSCEEEEEET--
T ss_pred EEecccCCCC---ccceEECCCCCEEE-EecCCCCcccEEEEECCCCC-eEEEEECCCCccceEECCCCCEEEEEecC--
Confidence 122222 222 23 67899999988 32222 22389999998764 32223322222 23477888887776543
Q ss_pred CCc-cEEEEEeCCCCCCc---eEEecCCCCceeeeEEEeCC--EEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeee
Q 009441 352 LFN-SELLACPVDNTSET---TVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 425 (534)
Q Consensus 352 ~~~-~~L~~~~~~~~~~~---~~li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~l 425 (534)
... ..++.++-.. ... .-.++.. .....+.+.++ +|++....++ .|.++++.+ ++.+.. ...+..
T Consensus 149 ~~~~i~~~~~~~~g-~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~-~~~~~~---~~~~~~ 219 (331)
T 3u4y_A 149 SANTVRRFKIDADG-VLFDTGQEFISGG--TRPFNITFTPDGNFAFVANLIGN--SIGILETQN-PENITL---LNAVGT 219 (331)
T ss_dssp TTTEEEEEEECTTC-CEEEEEEEEECSS--SSEEEEEECTTSSEEEEEETTTT--EEEEEECSS-TTSCEE---EEEEEC
T ss_pred CCceEEEEEECCCC-cEeecCCccccCC--CCccceEECCCCCEEEEEeCCCC--eEEEEECCC-Ccccce---eeeccC
Confidence 222 3444443211 100 1133332 23667777654 5777665444 688888875 553100 012221
Q ss_pred cCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEE
Q 009441 426 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKK 471 (534)
Q Consensus 426 p~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~ 471 (534)
.. .......+.+++.+++... ....++.+|+++++.+.+.
T Consensus 220 ~~---~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 220 NN---LPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp SS---CCCCEEECTTSSEEEEECS---SEEEEEEEETTTTEEEEEE
T ss_pred CC---CCceEEECCCCCEEEEEEc---CCCEEEEEECCCCceeeec
Confidence 11 1111223345666665433 3356889999998875444
No 47
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.49 E-value=3.8e-05 Score=88.71 Aligned_cols=143 Identities=10% Similarity=-0.003 Sum_probs=97.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEE-EEECCCCCeeccccC-CccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVY-VIDIETGTPVGKPLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~-v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.|| ||+.|+|+.+ ...|+ ++|+++++.....-. .....++|+||| .+++...+ ..|+.+++
T Consensus 339 ~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~ 407 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDL 407 (1045)
T ss_dssp EEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred eEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCC-----CeEEEEEC
Confidence 67788999 9999999877 24788 999998876542211 123569999999 77766532 37899998
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-------ceeEEEEEeCCCCCceeEeeeccccee-EEEeeeC
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-------ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRG 340 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-------~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g 340 (534)
.++. ...+... .......+.+||||++|++..... ....|++.+++++. ...+........ ..++++|
T Consensus 408 ~tg~--~~~~~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 408 ETGK--PTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADS 483 (1045)
T ss_dssp TTCC--EEEEEEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTS
T ss_pred CCCc--eEEeccC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCC
Confidence 7663 2344432 222233578999999998776432 34689999998764 555544332222 3378899
Q ss_pred CEEEEEEcC
Q 009441 341 NHFFITRRS 349 (534)
Q Consensus 341 ~~lyi~tn~ 349 (534)
..|++.++.
T Consensus 484 ~~l~~~s~~ 492 (1045)
T 1k32_A 484 KNLYYLSYR 492 (1045)
T ss_dssp CEEEEEESC
T ss_pred CEEEEEecc
Confidence 999998874
No 48
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.43 E-value=6.7e-05 Score=80.20 Aligned_cols=254 Identities=11% Similarity=0.014 Sum_probs=138.6
Q ss_pred EEEEEECC----CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC-----------C-ccceeEEccCCeEEEEEEC
Q 009441 193 VGCFQVSP----DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-----------G-VTASVEWAGNEALVYITMD 255 (534)
Q Consensus 193 l~~~~~SP----DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~-----------~-~~~~~~Ws~Dg~l~Y~~~d 255 (534)
...+.+|| ||++|+.+-... .++.|+|..+++.+.. ... . ....+.+++|+..+|....
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEES----SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCCCCEEEEEEccC----CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 56788999 999988764333 3688999999987652 111 1 2245889999845555543
Q ss_pred CCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec----ccc
Q 009441 256 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR----VVG 331 (534)
Q Consensus 256 ~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~----~~g 331 (534)
+ ..+|+.+++.+... ..+..-....+-.++.++|||+|+++..+. .+.|.++|+.+++ +....+. ..+
T Consensus 300 ~---~g~i~vvd~~~~~~--l~~~~i~~~~~~~~~~~spdg~~l~va~~~--~~~v~v~D~~tg~-l~~~i~~g~~ph~g 371 (543)
T 1nir_A 300 E---TGKVLLVNYKDIDN--LTVTSIGAAPFLHDGGWDSSHRYFMTAANN--SNKVAVIDSKDRR-LSALVDVGKTPHPG 371 (543)
T ss_dssp T---TTEEEEEECTTSSS--CEEEEEECCSSCCCEEECTTSCEEEEEEGG--GTEEEEEETTTTE-EEEEEECSSSBCCT
T ss_pred C---CCeEEEEEecCCCc--ceeEEeccCcCccCceECCCCCEEEEEecC--CCeEEEEECCCCe-EEEeeccCCCCCCC
Confidence 2 34788888876421 111111122343457899999998765432 3467889988765 3222221 111
Q ss_pred e-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCC--CceE----EecCCCCceeeeEEEeC--CEEEEEEeeCC----
Q 009441 332 V-DTAASHRGNHFFITRRSDELFNSELLACPVDNTS--ETTV----LIPHRESVKLQDIQLFI--DHLAVYEREGG---- 398 (534)
Q Consensus 332 ~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~--~~~~----li~~~~~~~l~~~~~~~--~~lv~~~~~~g---- 398 (534)
. ...+.++++.+|+..+. + ...|..++.+..+ ...| .++.... ....+...+ .+|++....+.
T Consensus 372 ~g~~~~~p~~g~~~~s~~~-~--d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~-~~~~v~~~pdg~~l~v~~~~~~~~~~ 447 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHL-G--DGSISLIGTDPKNHPQYAWKKVAELQGQGG-GSLFIKTHPKSSHLYVDTTFNPDARI 447 (543)
T ss_dssp TCEEEEETTTEEEEEEEBS-S--SSEEEEEECCTTTCTTTBTSEEEEEECSCS-CCCCEECCTTCCEEEECCTTCSSHHH
T ss_pred CCcccCCCCCccEEEeccC-C--CceEEEEEeCCCCCchhcCeEEEEEEcCCC-CceEEEcCCCCCcEEEecCCCCCccc
Confidence 1 11234556777654442 2 2356666664311 1113 2322211 122344443 46666542221
Q ss_pred eeEEEEEECCCCCCcccccCCCceee------ecCceeeEeCCCCccCccEEEEEeccC-CCCCeEEEEECCCCcEE
Q 009441 399 LQKITTYRLPAVGEPLKSLQGGKSVE------FIDPVYSIDPSESVFSSRILRFHYSSL-RTPPSVYDYDMDMGISV 468 (534)
Q Consensus 399 ~~~l~~~~l~~~g~~~~~~~~~~~i~------lp~~~~~i~~~~~~~~~~~l~~~~sS~-~~P~~~y~~d~~~~~~~ 468 (534)
...|.+++..+ ++.+ .+.+. +++....+..+..+.+++.++++..+- ....+|..+|.++++..
T Consensus 448 ~~~v~v~d~~~-~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 448 SQSVAVFDLKN-LDAK-----YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp HTCEEEEETTC-TTSC-----CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred CceEEEEECCC-CCCC-----eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEE
Confidence 34688999886 4432 01221 223221122223345788888876432 45789999999998854
No 49
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.40 E-value=0.00029 Score=72.91 Aligned_cols=247 Identities=8% Similarity=0.060 Sum_probs=135.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC--CCCeecc----ccCCccceeEEccCCeEEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--TGTPVGK----PLVGVTASVEWAGNEALVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~--tg~~~~~----~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~ 265 (534)
.|..+.|||||++|+++.+.+| .|+|+|+. +|+.+.. ........++|+|||.++++... ...++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----~g~v~~ 175 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDK----SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK----FGDVYS 175 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGT----EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET----TSEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCC----eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC----CCcEEE
Confidence 4778899999999877765554 58999998 7776542 11222346999999954455432 246888
Q ss_pred eecCCCCCCc--eEeeeecCCceEEEEEEcCC---CcEEEEEecCcceeEEEEEeCCCCCceeEee-eccccee-EEEee
Q 009441 266 HKLEADQSND--ICLYHEKDDIYSLGLQASES---KKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVD-TAASH 338 (534)
Q Consensus 266 ~~lgt~~~~d--~lv~~e~d~~~~v~~~~S~D---g~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~-~~~~g~~-~~v~~ 338 (534)
+++.+..... ...+.. .......+.+++| +++|+..+.+ ..|++.++..+.....+. .....+. ..++
T Consensus 176 ~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDRD---EHIKISHYPQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp EETTSCCCSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEETT---SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-
T ss_pred EecCCcccccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcCC---CcEEEEECCCCceeeeeecCCCCceEEEEEC-
Confidence 8876553221 112222 1223345788999 8887655432 346666766543222222 2222222 2255
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecC------------------------CCCceeeeEEEeC--CEEEE
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH------------------------RESVKLQDIQLFI--DHLAV 392 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~------------------------~~~~~l~~~~~~~--~~lv~ 392 (534)
++..|+..+. .+.|...++.+..... .+.. ..+..+..+.+.+ ..|++
T Consensus 251 d~~~l~s~~~-----d~~v~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 324 (450)
T 2vdu_B 251 KDYLLLSAGG-----DDKIFAWDWKTGKNLS-TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF 324 (450)
T ss_dssp STTEEEEEES-----SSEEEEEETTTCCEEE-EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred CCCEEEEEeC-----CCeEEEEECCCCcEee-eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence 5665554432 2456666765432111 1110 1123467777764 35555
Q ss_pred EEeeCCeeEEEEEEC--CCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCC------eEEEEECCC
Q 009441 393 YEREGGLQKITTYRL--PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP------SVYDYDMDM 464 (534)
Q Consensus 393 ~~~~~g~~~l~~~~l--~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~------~~y~~d~~~ 464 (534)
....++ .|.++++ .. +..+.. ...+..+.....+ .+..+.++++..+...|+ .+|.++..+
T Consensus 325 ~~~~d~--~i~iw~~~~~~-~~~l~~---~~~~~~~~~v~~~-----~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 325 FVEATK--CIIILEMSEKQ-KGDLAL---KQIITFPYNVISL-----SAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp EETTCS--EEEEEEECSSS-TTCEEE---EEEEECSSCEEEE-----EEETTEEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred EECCCC--eEEEEEeccCC-CCceee---ccEeccCCceEEE-----EecCCcEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 554555 4666676 32 321110 1223333222112 122246888888888887 899999888
Q ss_pred CcEE
Q 009441 465 GISV 468 (534)
Q Consensus 465 ~~~~ 468 (534)
++++
T Consensus 394 ~~~~ 397 (450)
T 2vdu_B 394 NSFV 397 (450)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 8765
No 50
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.40 E-value=2.8e-05 Score=78.54 Aligned_cols=200 Identities=11% Similarity=0.096 Sum_probs=110.9
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~ 271 (534)
+..+++||||++||.+. |++..+|+|+|+.+++.+.. .-.+....++|+|||.++.+..+. .+.++...++
T Consensus 136 ~~~v~fSpDg~~la~as---~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-----~~~~~~~~~~ 207 (365)
T 4h5i_A 136 TKLVYISREGTVAAIAS---SKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-----SLEVISTVTG 207 (365)
T ss_dssp EEEEEECTTSSCEEEEE---SCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-----CEEEEETTTC
T ss_pred EEEEEEcCCCCEEEEEE---CCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-----eEEEEEeccC
Confidence 44578999999999874 33345899999999987642 112223459999999444444332 3444444433
Q ss_pred CCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcc-eeEEEEEeCCCCC-ce---eEeeeccccee-EEEeeeCCEEEE
Q 009441 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPE-EL---RVLTPRVVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 272 ~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~-~~ev~~~d~~~~~-~~---~~l~~~~~g~~-~~v~~~g~~lyi 345 (534)
.......... .......+.++|||++++..+.... ...++..++.... .. ..+.....++. ..++++|..|+.
T Consensus 208 ~~~~~~~~~~-~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 208 SCIARKTDFD-KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp CEEEEECCCC-TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred cceeeeecCC-CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE
Confidence 2111111111 1222335789999999887665433 2345666654432 11 12222222222 236787776655
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
-+.. +.|...|+.+..... .+.......|..+.+.+| .+++....|+. |++++++.
T Consensus 287 gs~D-----~~V~iwd~~~~~~~~-~~~~gH~~~V~~v~fSpdg~~laS~S~D~t--vrvw~ip~ 343 (365)
T 4h5i_A 287 ASND-----NSIALVKLKDLSMSK-IFKQAHSFAITEVTISPDSTYVASVSAANT--IHIIKLPL 343 (365)
T ss_dssp EETT-----SCEEEEETTTTEEEE-EETTSSSSCEEEEEECTTSCEEEEEETTSE--EEEEECCT
T ss_pred EcCC-----CEEEEEECCCCcEEE-EecCcccCCEEEEEECCCCCEEEEEeCCCe--EEEEEcCC
Confidence 4442 345556765432111 222222335888888764 67778888884 55667763
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.38 E-value=0.00027 Score=69.32 Aligned_cols=255 Identities=15% Similarity=0.078 Sum_probs=125.7
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC--CCCeecc-cc--CCccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--TGTPVGK-PL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~--tg~~~~~-~i--~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
+..+.|||||++|+++...+| .+.+++++ +|+.... .+ .+....++|+|||..+|+.... ...|+.++
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~i~~~d 112 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEF----RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN---AGNVSVTR 112 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTT----EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT---TTEEEEEE
T ss_pred CceEEECCCCCEEEEeecCCC----eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC---CCeEEEEE
Confidence 455789999999988776433 57777766 7764321 12 2233458999999444444321 23566666
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC-CCceeEee----ecccc--ee-EEEeee
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK-PEELRVLT----PRVVG--VD-TAASHR 339 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~-~~~~~~l~----~~~~g--~~-~~v~~~ 339 (534)
+..+. ....+..-........+.+++||++|++.... ...|++.++.. +. +..+. ....+ .. ..++++
T Consensus 113 ~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 113 LEDGL-PVGVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTVSDDGH-LVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EETTE-EEEEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEECTTSC-EEEEEEEEEECSTTCCEEEEEECTT
T ss_pred CCCCc-cccccccccCCCCceEEEECCCCCEEEEecCC--CCEEEEEEecCCCc-eeeecccccccCCCCCcceEEECCC
Confidence 63211 11122111111112246789999998775422 34577777765 43 32211 11111 22 336777
Q ss_pred CCEEEEEEcCCCCCccEEEEEeCCC--CCCceE-E---ecCC--CCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCC
Q 009441 340 GNHFFITRRSDELFNSELLACPVDN--TSETTV-L---IPHR--ESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 340 g~~lyi~tn~~~~~~~~L~~~~~~~--~~~~~~-l---i~~~--~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
|..+|+.... . ..+...+++. ...... . ++.. ....+..+.+.+ ++|++....++ .|.+++++.
T Consensus 189 g~~l~~~~~~--~--~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~--~i~v~d~~~ 262 (343)
T 1ri6_A 189 EQYAYCVNEL--N--SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS--LITVFSVSE 262 (343)
T ss_dssp SSEEEEEETT--T--TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT--EEEEEEECT
T ss_pred CCEEEEEeCC--C--CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC--EEEEEEEcC
Confidence 8878776543 2 3555566532 211111 1 2221 112345677764 46766665555 566667652
Q ss_pred CCCcccccCCCcee-eecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEE
Q 009441 410 VGEPLKSLQGGKSV-EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKI 472 (534)
Q Consensus 410 ~g~~~~~~~~~~~i-~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~ 472 (534)
.+... +.+ .++.... +..+..+.+++.+++... ...--.+|.+|.++|+.+.+..
T Consensus 263 ~~~~~------~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 263 DGSVL------SKEGFQPTETQ-PRGFNVDHSGKYLIAAGQ-KSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp TSCCE------EEEEEEECSSS-CCCEEECTTSSEEEEECT-TTCEEEEEEEETTTTEEEEEEE
T ss_pred CCCce------EEeeeecCCCc-cceEEECCCCCEEEEecC-CCCeEEEEEEcCCCceeeEccc
Confidence 11111 111 1111111 111122344555554432 2222345666877887665543
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.34 E-value=0.0012 Score=65.14 Aligned_cols=198 Identities=12% Similarity=0.107 Sum_probs=114.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.|||||++||.+.. +| .|+|+|+.+++.+.. +. +....++|+||+.++++... ...|+.+++
T Consensus 34 ~v~~~~~s~~~~~l~~~~~-dg----~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~ 103 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSK-DS----SASVWYSLNGERLGT-LDGHTGTIWSIDVDCFTKYCVTGSA----DYSIKLWDV 103 (369)
T ss_dssp CEEEEEECTTSCEEEEEES-SS----CEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEEEEET----TTEEEEEET
T ss_pred eEEEEEEcCCCCEEEEEeC-CC----EEEEEeCCCchhhhh-hhhcCCcEEEEEEcCCCCEEEEEeC----CCeEEEEEC
Confidence 4778899999999998754 23 699999999987652 22 22345899999954455432 236888888
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecC--cceeEEEEEeCCCCC---cee--------Eeeeccc--cee
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES--KITRFVFYLDVSKPE---ELR--------VLTPRVV--GVD 333 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~--~~~~ev~~~d~~~~~---~~~--------~l~~~~~--g~~ 333 (534)
.++. ....+. .......+.+++++++++....+ .....+++.++.... .+. .+..... .+.
T Consensus 104 ~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 104 SNGQ--CVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp TTCC--EEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred CCCc--EEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 7652 223333 22334467899999998876644 222455665554432 111 1111110 111
Q ss_pred -EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCC
Q 009441 334 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVG 411 (534)
Q Consensus 334 -~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g 411 (534)
..+++++..|+..+. ++.|...++.........+..... .+..+.+.++ .+++....+| .|.++++.. +
T Consensus 180 ~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~--~i~v~d~~~-~ 250 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHK-----DGKISKYDVSNNYEYVDSIDLHEK-SISDMQFSPDLTYFITSSRDT--NSFLVDVST-L 250 (369)
T ss_dssp EEEECGGGCEEEEEET-----TSEEEEEETTTTTEEEEEEECCSS-CEEEEEECTTSSEEEEEETTS--EEEEEETTT-C
T ss_pred EEEEcCCCCEEEEEcC-----CCEEEEEECCCCcEeEEEEecCCC-ceeEEEECCCCCEEEEecCCc--eEEEEECCC-C
Confidence 225566666655443 246777777652211123332222 4778888653 3455555566 577788875 4
Q ss_pred C
Q 009441 412 E 412 (534)
Q Consensus 412 ~ 412 (534)
+
T Consensus 251 ~ 251 (369)
T 3zwl_B 251 Q 251 (369)
T ss_dssp C
T ss_pred c
Confidence 4
No 53
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.33 E-value=0.00064 Score=67.32 Aligned_cols=257 Identities=14% Similarity=0.054 Sum_probs=124.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc---CCccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i---~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
...+.+||||+ |+++ +..+ +...|+++|+++|+.... .+ ......++|+|||..+|+.... ...+..+++
T Consensus 42 p~~~a~spdg~-l~~~-~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~---~~~v~v~~~ 115 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSV-DKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH---KGTAEVMKI 115 (347)
T ss_dssp CCCEEECTTCE-EEEE-EEET-TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT---TTEEEEEEE
T ss_pred cceEEEccCCe-EEEE-EecC-CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC---CCEEEEEEe
Confidence 34578999999 4443 3322 246899999988764221 11 1123458999999544554321 235666665
Q ss_pred CCCCCCceEeee--e--cCC------ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC-CCCceeEee--eccc--cee
Q 009441 269 EADQSNDICLYH--E--KDD------IYSLGLQASESKKFLFIASESKITRFVFYLDVS-KPEELRVLT--PRVV--GVD 333 (534)
Q Consensus 269 gt~~~~d~lv~~--e--~d~------~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~-~~~~~~~l~--~~~~--g~~ 333 (534)
.... .-..+.. . ..+ .....+.++|||+ +++.... ...+++.+++ ++. +..+. .... +..
T Consensus 116 ~~~g-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~--~~~v~~~~~~~~g~-~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 116 AADG-ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG--SDKVYVYNVSDAGQ-LSEQSVLTMEAGFGPR 190 (347)
T ss_dssp CTTS-CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--TTEEEEEEECTTSC-EEEEEEEECCTTCCEE
T ss_pred CCCC-CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--CCEEEEEEECCCCc-EEEeeeEEcCCCCCCc
Confidence 3221 1112211 1 011 1233478999999 6554332 2356777766 333 32221 1111 222
Q ss_pred -EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCC-----CceeeeEEEeCC--EEEEEEeeCCeeEEEE
Q 009441 334 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRE-----SVKLQDIQLFID--HLAVYEREGGLQKITT 404 (534)
Q Consensus 334 -~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~-----~~~l~~~~~~~~--~lv~~~~~~g~~~l~~ 404 (534)
..++++|..+|+.... .....++.++..+...... .+.... ......+.+.++ +|++....++ .|.+
T Consensus 191 ~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~--~v~v 266 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGEL--SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN--TLAV 266 (347)
T ss_dssp EEEECTTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT--EEEE
T ss_pred eEEECCCCCEEEEEeCC--CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC--EEEE
Confidence 3477888878776543 3334455554322221111 111111 123666777653 6777665454 4666
Q ss_pred EECCCCCCcccccCCCcee-eecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEE
Q 009441 405 YRLPAVGEPLKSLQGGKSV-EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKI 472 (534)
Q Consensus 405 ~~l~~~g~~~~~~~~~~~i-~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~ 472 (534)
++++.+|.. +.+ .++........+..+.+++.+++.-. ...--.+|.+|.++|+.+.+..
T Consensus 267 ~~~~~~g~~-------~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 267 FAVTADGHL-------TLIQQISTEGDFPRDFDLDPTEAFVVVVNQ-NTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp EEECGGGCE-------EEEEEEECSSSCCCEEEECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEE
T ss_pred EEECCCCcE-------EEeEEEecCCCCcCeEEECCCCCEEEEEEc-CCCcEEEEEEeCCCCeEEeccc
Confidence 666532321 111 11110000111122345665554432 2222345666888888766553
No 54
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.27 E-value=0.00094 Score=67.61 Aligned_cols=117 Identities=10% Similarity=-0.034 Sum_probs=70.5
Q ss_pred EECCCCCEEEEEEcCCCCeEE-EEEEEECCCCCeeccccC-CccceeEEccCCeEEEEEECC------CCCCceEEEeec
Q 009441 197 QVSPDNKLVAYAEDTKGDEIY-TVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMDE------ILRPDKAWLHKL 268 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~G~E~~-~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg~l~Y~~~d~------~~r~~~v~~~~l 268 (534)
.++||+++ +|..+..+.... ++.++|.++++.+. .++ +...+++++|||+.+|+.... ..+...|..++.
T Consensus 27 ~~~~~~~~-~yv~~~~~~~~~~~v~v~D~~t~~~~~-~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRR-SYINLPAHHSAIIQQWVLDAGSGSILG-HVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCE-EEEeCCcccCCccEEEEEECCCCeEEE-EecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 45688855 777775232222 89999999998765 343 332379999999555555321 112346777777
Q ss_pred CCCCCCceEeee-------ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 269 EADQSNDICLYH-------EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 269 gt~~~~d~lv~~-------e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
.+......+-.. ...| -.+.+||||++|++.... ..+.|.++| ++.+
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p---~~~~~spDG~~l~v~n~~-~~~~v~viD-~t~~ 158 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYS---WMNANTPNNADLLFFQFA-AGPAVGLVV-QGGS 158 (373)
T ss_pred CCCcEEEEEECCCccccccCCCc---cceEECCCCCEEEEEecC-CCCeEEEEE-CCCC
Confidence 654211111111 0112 146799999999885322 246789999 7765
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.26 E-value=0.00026 Score=72.28 Aligned_cols=201 Identities=11% Similarity=0.098 Sum_probs=118.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCC---CCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEIL---RPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~---r~~~v~~~ 266 (534)
.+..+.+||||++|+++...+| .|+++|+.+++.+.. ........++|+||| .++........ ....|+.+
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~ 288 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE----DISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY 288 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT----EEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred CeeEEEEcCCCCEEEEEecCCC----cEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence 3567899999999988765555 699999999877542 112223568999999 55555432211 13478888
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEE
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi 345 (534)
++.++. -...... +.....+.+++||+++++.... ...+++.++.+++ .....+...++. ..++++|..+|+
T Consensus 289 d~~~~~--~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~--~~~v~v~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 289 SMDKEK--LIDTIGP--PGNKRHIVSGNTENKIYVSDMC--CSKIEVYDLKEKK-VQKSIPVFDKPNTIALSPDGKYLYV 361 (433)
T ss_dssp ETTTTE--EEEEEEE--EECEEEEEECSSTTEEEEEETT--TTEEEEEETTTTE-EEEEEECSSSEEEEEECTTSSEEEE
T ss_pred ECCCCc--EEeeccC--CCCcceEEECCCCCEEEEEecC--CCEEEEEECCCCc-EEEEecCCCCCCeEEEcCCCCEEEE
Confidence 887552 1112211 1123357889999998876543 3467888887654 322233222222 336777888887
Q ss_pred EEcCCCC----------CccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEEeeCCeeEEEEEECC
Q 009441 346 TRRSDEL----------FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 346 ~tn~~~~----------~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~l~ 408 (534)
.+...+. ..+.|...++.+... ...++.. ..+..+.+..+ .|++....++ .|.+++++
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~-~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d~--~i~v~~~~ 431 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV-KEFWEAG--NQPTGLDVSPDNRYLVISDFLDH--QIRVYRRD 431 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTTEE-EEEEECS--SSEEEEEECTTSCEEEEEETTTT--EEEEEEET
T ss_pred EecCCCccccccccccccceEEEEEECCCCcE-EEEecCC--CCCceEEEcCCCCEEEEEECCCC--eEEEEEec
Confidence 7653211 146888888865321 1134432 24677777653 5555444455 45555554
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.26 E-value=0.00019 Score=71.23 Aligned_cols=204 Identities=17% Similarity=0.163 Sum_probs=104.6
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC-CCCeecc-cc--CC----------ccceeEEccCCeEEEEEECCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGK-PL--VG----------VTASVEWAGNEALVYITMDEIL 258 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~-tg~~~~~-~i--~~----------~~~~~~Ws~Dg~l~Y~~~d~~~ 258 (534)
+..+.+||||++|+++...+| .+.++|+. +|..... .+ .+ ....++|+|||. +|+....
T Consensus 88 p~~~a~spdg~~l~~~~~~~~----~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~-- 160 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKG----TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG-- 160 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTT----EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--
T ss_pred CEEEEECCCCCEEEEEeCCCC----EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--
Confidence 445789999999988765444 57788874 3432211 11 10 122489999998 5554321
Q ss_pred CCceEEEeecCCCCCCceEe--eeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeee---ccc---
Q 009441 259 RPDKAWLHKLEADQSNDICL--YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---RVV--- 330 (534)
Q Consensus 259 r~~~v~~~~lgt~~~~d~lv--~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~---~~~--- 330 (534)
..+|+.+++.... .-..+ +.......-..+.++|||++|++.......-.+|-++..++. +..+.. ...
T Consensus 161 -~~~v~~~~~~~~g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 161 -SDKVYVYNVSDAG-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA-FTQLGIVKTIPADYT 237 (347)
T ss_dssp -TTEEEEEEECTTS-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE-EEEEEEEESSCTTCC
T ss_pred -CCEEEEEEECCCC-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-eEEeeeeeecCCCCC
Confidence 2367777776221 11111 111111122347899999998876544433344545543333 322211 111
Q ss_pred ---cee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE--EecCCCCceeeeEEEeC--CEEEEEEeeCCeeEE
Q 009441 331 ---GVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFI--DHLAVYEREGGLQKI 402 (534)
Q Consensus 331 ---g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~--li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l 402 (534)
+.. ..++++|..||+.... . ..|...+++..+.... .++.. ......+.+.+ ++|++....++.-.+
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~--~--~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v 312 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRG--Y--NTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNTDNATL 312 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEET--T--TEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCcceeEEECCCCCEEEEEeCC--C--CEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcCCCcEEE
Confidence 111 3377888888776542 2 3455555432111111 23321 22356677765 367766665565555
Q ss_pred EEEECCCCCC
Q 009441 403 TTYRLPAVGE 412 (534)
Q Consensus 403 ~~~~l~~~g~ 412 (534)
+.++..+ |+
T Consensus 313 ~~~d~~t-g~ 321 (347)
T 3hfq_A 313 YARDLTS-GK 321 (347)
T ss_dssp EEECTTT-CC
T ss_pred EEEeCCC-Ce
Confidence 5555543 44
No 57
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.26 E-value=0.00072 Score=68.99 Aligned_cols=199 Identities=16% Similarity=0.055 Sum_probs=119.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc-cCC-ccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~-i~~-~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.|+|||++++-+.. + ..|+++|+++++.+... ..+ ....++|+||+ .+|.+... ...|+.+++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~-d----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~i~~~d~ 241 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQ-A----NAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI----SEDISVIDR 241 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGG-G----TEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT----TTEEEEEET
T ss_pred ceeEEEEcCCCEEEEEECC-C----CEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC----CCcEEEEEC
Confidence 5677889999987765432 2 36999999998876421 111 23458999999 55555422 237888888
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCc-----ceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-----ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH 342 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-----~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~ 342 (534)
.++. ....+. .......+.+++||++|++..... ....|++.++.+++ ............ ..++++++.
T Consensus 242 ~~~~--~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~g~~ 316 (433)
T 3bws_A 242 KTKL--EIRKTD--KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTIGPPGNKRHIVSGNTENK 316 (433)
T ss_dssp TTTE--EEEECC--CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEEEEEECEEEEEECSSTTE
T ss_pred CCCc--EEEEec--CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-EEeeccCCCCcceEEECCCCCE
Confidence 6542 112222 122334578999999988765322 24689999988754 322222111222 236677778
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEEeeCCee------------EEEEEECC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQ------------KITTYRLP 408 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~------------~l~~~~l~ 408 (534)
+|+.... .++|...++.+... ...++.. ..+..+.+.++ .|++....++.. .|+++++.
T Consensus 317 l~~~~~~----~~~v~v~d~~~~~~-~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 317 IYVSDMC----CSKIEVYDLKEKKV-QKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp EEEEETT----TTEEEEEETTTTEE-EEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred EEEEecC----CCEEEEEECCCCcE-EEEecCC--CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 8776553 25777788764321 2244433 23677887653 566665543322 78999987
Q ss_pred CCCC
Q 009441 409 AVGE 412 (534)
Q Consensus 409 ~~g~ 412 (534)
+ ++
T Consensus 390 ~-~~ 392 (433)
T 3bws_A 390 T-DT 392 (433)
T ss_dssp T-TE
T ss_pred C-Cc
Confidence 5 44
No 58
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.25 E-value=0.00085 Score=67.01 Aligned_cols=251 Identities=12% Similarity=0.090 Sum_probs=125.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeE-EEEEEEECCCCCeecc----c--cCCccceeEEccCCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEI-YTVYVIDIETGTPVGK----P--LVGVTASVEWAGNEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~-~~l~v~dl~tg~~~~~----~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+++||||++||-+.+..+.-+ ..+.+++......... . .+.....++|++|+.|+-.. .+ ..|.
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s-~d----g~v~ 106 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVAS-DS----GAVE 106 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEE-TT----SEEE
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEE-CC----CEEE
Confidence 4778899999999997765433211 2344444222111110 0 11122458999998665433 22 3577
Q ss_pred EeecCCCCCCceEeee-ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCE
Q 009441 265 LHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH 342 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~-e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~ 342 (534)
.+++.+++.....-+. .........+++++||++|+..+.+ ..|.+.++.++.....+......+. ..+.+++..
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 7777665322222221 1122334468899999998765433 2467778776542222322222222 225566655
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGG 420 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~ 420 (534)
+++....+ +.|...|+..+....-+........+..+.+.. ..+++....+| .|+++++.+ ++.+.
T Consensus 184 ~l~s~s~D----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg--~v~~wd~~~-~~~~~----- 251 (344)
T 4gqb_B 184 VFLSCSED----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG--TVSLVDTKS-TSCVL----- 251 (344)
T ss_dssp EEEEEETT----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS--EEEEEESCC---CCE-----
T ss_pred ceeeeccc----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC--cEEEEECCC-CcEEE-----
Confidence 55544332 346566776543222122222233466677754 45777777777 466778875 55321
Q ss_pred ceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 421 KSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 421 ~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
.+.... ..+......+++..++++.+. =+++..+|+.+++..
T Consensus 252 -~~~~h~--~~v~~v~fsp~g~~~lasgs~---D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 252 -SSAVHS--QCVTGLVFSPHSVPFLASLSE---DCSLAVLDSSLSELF 293 (344)
T ss_dssp -EEECCS--SCEEEEEECSSSSCCEEEEET---TSCEEEECTTCCEEE
T ss_pred -EEcCCC--CCEEEEEEccCCCeEEEEEeC---CCeEEEEECCCCcEE
Confidence 222111 112111122334444444332 246888898888743
No 59
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.23 E-value=0.0046 Score=61.45 Aligned_cols=257 Identities=11% Similarity=0.063 Sum_probs=118.7
Q ss_pred EEEEECCCCCEEEEEEcCC-CCeEEEEEEEECCCCCeecc-ccC--Cc-cceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 194 GCFQVSPDNKLVAYAEDTK-GDEIYTVYVIDIETGTPVGK-PLV--GV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~-G~E~~~l~v~dl~tg~~~~~-~i~--~~-~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
..+.+||||++|+++...+ ++....++.++.++|+.... .+. +. ...+++ ||.++|+.... ...|..+++
T Consensus 53 ~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~---~~~v~~~~~ 127 (361)
T 3scy_A 53 SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYS---GGSITVFPI 127 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETT---TTEEEEEEB
T ss_pred ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECC---CCEEEEEEe
Confidence 4468999999987776542 23345555566666754321 121 11 223555 77555555321 235666666
Q ss_pred CCCCCC---ceEe-eeecCC-------ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC---c-ee-------Eee
Q 009441 269 EADQSN---DICL-YHEKDD-------IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---E-LR-------VLT 326 (534)
Q Consensus 269 gt~~~~---d~lv-~~e~d~-------~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~---~-~~-------~l~ 326 (534)
.+...- ...+ +....+ .....+.++|||++|++.......-.+|-++..+.. + +. ...
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 432111 0111 111111 122347899999998876543333344544543320 0 11 111
Q ss_pred eccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCC--CCceeeeEEEeC--CEEEEEEee-CCe
Q 009441 327 PRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHR--ESVKLQDIQLFI--DHLAVYERE-GGL 399 (534)
Q Consensus 327 ~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~--~~~~l~~~~~~~--~~lv~~~~~-~g~ 399 (534)
+...+.. ..++++|..+|+.... . ..|...++++...... .++.. ......++.+.+ ++|++.... ++
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~--~--~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~- 282 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEI--G--GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD- 282 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETT--T--CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC-
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCC--C--CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC-
Confidence 1122222 3377888888776542 2 3455555543221111 12111 112245677765 356665544 34
Q ss_pred eEEEEEECCC-CCCcccccCCCcee-eecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEE
Q 009441 400 QKITTYRLPA-VGEPLKSLQGGKSV-EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (534)
Q Consensus 400 ~~l~~~~l~~-~g~~~~~~~~~~~i-~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~ 470 (534)
.|.+++++. .|+. +.+ .++. +.....+..+.+++.+++.-. ...--.+|.+|.++|+.+.+
T Consensus 283 -~i~v~~~~~~~g~~-------~~~~~~~~-g~~~~~~~~spdg~~l~~~~~-~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 283 -GVAIFKVDETNGTL-------TKVGYQLT-GIHPRNFIITPNGKYLLVACR-DTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp -EEEEEEECTTTCCE-------EEEEEEEC-SSCCCEEEECTTSCEEEEEET-TTTEEEEEEECTTTCCEEEC
T ss_pred -EEEEEEEcCCCCcE-------EEeeEecC-CCCCceEEECCCCCEEEEEEC-CCCCEEEEEEECCCCcEeec
Confidence 456666541 1431 111 1111 000111122345665655432 22223466788888876543
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.22 E-value=0.0018 Score=63.05 Aligned_cols=239 Identities=10% Similarity=0.051 Sum_probs=128.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc--c-----cCCccceeEEccCCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--P-----LVGVTASVEWAGNEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~--~-----i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.+..+.|||||++|+.+. + ..++++|+.+++.... . .......++|+||+.++++... ...|+
T Consensus 53 ~v~~~~~~~~~~~l~~~~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~ 122 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG--K----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----ASTLS 122 (337)
T ss_dssp CCCEEEECSSSSEEEEEC--B----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----SSEEE
T ss_pred ceEEEEEecCCcEEEEcC--C----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----CCcEE
Confidence 366789999999999874 2 3799999998764321 1 1122345899999944444432 13677
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEE
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHF 343 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~l 343 (534)
.+++.++.......+.. .......+.+++++++++....+ ..+++.++.++.....+......+. ..+++++..|
T Consensus 123 ~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d---g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTS-SAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp EEECCCC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEECCCCCcceeeeccc-CCCceEEEEECCCCCEEEEEeCC---CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEE
Confidence 78887653111222222 22233457899999998765543 3578888876541222222222222 2355666666
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCCcccccCCCce
Q 009441 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS 422 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~ 422 (534)
+..+. ++.|...++..... ...+... ..+..+.+.++ .+++....+| .|+++++.. ++.
T Consensus 199 ~~~~~-----dg~i~~~d~~~~~~-~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~--~i~~~~~~~-~~~--------- 258 (337)
T 1gxr_A 199 WTGGL-----DNTVRSWDLREGRQ-LQQHDFT--SQIFSLGYCPTGEWLAVGMESS--NVEVLHVNK-PDK--------- 258 (337)
T ss_dssp EEEET-----TSEEEEEETTTTEE-EEEEECS--SCEEEEEECTTSSEEEEEETTS--CEEEEETTS-SCE---------
T ss_pred EEEec-----CCcEEEEECCCCce-EeeecCC--CceEEEEECCCCCEEEEEcCCC--cEEEEECCC-CCe---------
Confidence 65443 24677777765321 1133322 24777777643 3444455555 477778874 331
Q ss_pred eeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 423 VEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 423 i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
..+......+.......+++.+. +.+ .-+.+..||+.+++..
T Consensus 259 ~~~~~~~~~v~~~~~~~~~~~l~-~~~---~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 259 YQLHLHESCVLSLKFAYCGKWFV-STG---KDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEE-EEE---TTSEEEEEETTTCCEE
T ss_pred EEEcCCccceeEEEECCCCCEEE-Eec---CCCcEEEEECCCCeEE
Confidence 11111111121111223344333 222 2367889999888754
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.18 E-value=0.002 Score=63.56 Aligned_cols=202 Identities=11% Similarity=0.032 Sum_probs=110.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++|+.+.. +| .|+++|+.+++.+.. ........+.|+|++ .++....+.......|..+++.
T Consensus 76 ~v~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSA-DY----SIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp CEEEEEECTTSSEEEEEET-TT----EEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeC-CC----eEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 4778899999999987644 33 799999999987653 222334569999999 5555443312223456666664
Q ss_pred CCCCCceEee----------eecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeeccccee-EEEe
Q 009441 270 ADQSNDICLY----------HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAAS 337 (534)
Q Consensus 270 t~~~~d~lv~----------~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~~~g~~-~~v~ 337 (534)
+......+.. ..........+.+++|+++++....+ ..|++.++.... ....+......+. ..++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 227 (369)
T 3zwl_B 151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD---GKISKYDVSNNYEYVDSIDLHEKSISDMQFS 227 (369)
T ss_dssp ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT---SEEEEEETTTTTEEEEEEECCSSCEEEEEEC
T ss_pred CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC---CEEEEEECCCCcEeEEEEecCCCceeEEEEC
Confidence 4321111111 11111134457899999998765433 467888887633 2222322222222 2356
Q ss_pred eeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCC-----------eeEEEE
Q 009441 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGG-----------LQKITT 404 (534)
Q Consensus 338 ~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g-----------~~~l~~ 404 (534)
+++..|+..+.. +.|...++.+... ...+... ..+..+.+.. ..+++....++ ...+.+
T Consensus 228 ~~~~~l~~~~~d-----~~i~v~d~~~~~~-~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 228 PDLTYFITSSRD-----TNSFLVDVSTLQV-LKKYETD--CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTCCE-EEEEECS--SCEEEEEECSSSSEEEEEECCC-------------CEEEE
T ss_pred CCCCEEEEecCC-----ceEEEEECCCCce-eeeecCC--CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEE
Confidence 677766555432 4677777765332 1133322 2366666654 34444433321 225666
Q ss_pred EECCC
Q 009441 405 YRLPA 409 (534)
Q Consensus 405 ~~l~~ 409 (534)
+++..
T Consensus 300 ~d~~~ 304 (369)
T 3zwl_B 300 YHKIF 304 (369)
T ss_dssp EETTT
T ss_pred EecCC
Confidence 77664
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.17 E-value=0.0017 Score=72.14 Aligned_cols=195 Identities=10% Similarity=0.088 Sum_probs=110.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-c-cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~-i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.|||||++||.+.. +| .|+|+|+.+|+.+.. . -.+....++|+|||.++.+... ...|..+++.
T Consensus 15 ~v~~i~~sp~~~~la~~~~-~g----~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~vw~~~ 85 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY-SG----RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD----DFRIRVFNYN 85 (814)
T ss_dssp CEEEEEECSSSSEEEEEET-TS----EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET----TSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeC-CC----EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC----CCeEEEEECC
Confidence 4778899999999999864 33 699999999976542 1 1222356999999944444433 2367777876
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc-ee-EEEee-eCCEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VD-TAASH-RGNHFFIT 346 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g-~~-~~v~~-~g~~lyi~ 346 (534)
++. ....+.. .......+.+++||++|+..+.+ ..+.+.++.++...........+ +. ..+++ ++..|+..
T Consensus 86 ~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 86 TGE--KVVDFEA-HPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp TCC--EEEEEEC-CSSCEEEEEECSSSSEEEEEETT---SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCc--EEEEEec-CCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 652 2222332 23344568899999998754432 34566666554212222222122 22 22555 44444433
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC---CEEEEEEeeCCeeEEEEEECCC
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI---DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~---~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+. + +.|...++..... ...+.......+..+.+.. +.+++....+| .|.++++..
T Consensus 160 ~~-d----g~v~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~ 217 (814)
T 3mkq_A 160 CL-D----RTVKVWSLGQSTP-NFTLTTGQERGVNYVDYYPLPDKPYMITASDDL--TIKIWDYQT 217 (814)
T ss_dssp ET-T----SEEEEEETTCSSC-SEEEECCCTTCCCEEEECCSTTCCEEEEECTTS--EEEEEETTT
T ss_pred eC-C----CeEEEEECCCCcc-eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC--EEEEEECCC
Confidence 32 2 4576777754332 2222222222466666653 44566666666 577778764
No 63
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.12 E-value=0.0068 Score=58.83 Aligned_cols=196 Identities=9% Similarity=0.074 Sum_probs=107.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.+||||++||-+.. + .+++|+|+++++.+.. .. ......+.|++|+.++.+...+ ..|..+++.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~-d----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d----~~i~vwd~~ 85 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLY-S----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD----FRIRVFNYN 85 (304)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT----SEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcC-C----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC----CEEEEEECC
Confidence 3778899999999987654 2 3799999999876542 11 1223458899999555665432 367777887
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeE--EEeeeCCEEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASHRGNHFFITR 347 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~--~v~~~g~~lyi~t 347 (534)
++. ....+.. .......+.++|++++|+..+.+ ..|.+-++.++...........+... .+.+.++.+++..
T Consensus 86 ~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 86 TGE--KVVDFEA-HPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp TCC--EEEEEEC-CSSCEEEEEECSSSSEEEEEETT---SCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred CCc--EEEEEeC-CCCcEEEEEEcCCCCEEEEECCC---CeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 652 2233432 23444568899999987654332 23555566553212222222122122 2444333333333
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEe---CCEEEEEEeeCCeeEEEEEECCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF---IDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~---~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.. .+.|...++.......-+.... ...+..+.+. ++.+++....++ .|.++++.+
T Consensus 160 s~----D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~--~i~iWd~~~ 217 (304)
T 2ynn_A 160 CL----DRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDL--TIKIWDYQT 217 (304)
T ss_dssp ET----TSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTS--EEEEEETTT
T ss_pred eC----CCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCC--eEEEEeCCC
Confidence 32 2456566665432211122222 2235555553 235667777777 466678874
No 64
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.11 E-value=0.00036 Score=68.35 Aligned_cols=201 Identities=12% Similarity=0.136 Sum_probs=105.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC---eeccccCC--ccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT---PVGKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~---~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.+..+.|||||++|+++...+| .|.++|+..|+ .+. .+.. ....++|+|||..+|+.... ...|+.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~----~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~---~~~v~~~ 156 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAG----NVSVTRLEDGLPVGVVD-VVEGLDGCHSANISPDNRTLWVPALK---QDRICLF 156 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTT----EEEEEEEETTEEEEEEE-EECCCTTBCCCEECTTSSEEEEEEGG---GTEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCC----eEEEEECCCCccccccc-cccCCCCceEEEECCCCCEEEEecCC---CCEEEEE
Confidence 3566789999999988866444 58888884333 222 2221 23458999999444554311 2367777
Q ss_pred ecCCCCCCceE----eeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC--CC-c-eeEeeecccc------e
Q 009441 267 KLEADQSNDIC----LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK--PE-E-LRVLTPRVVG------V 332 (534)
Q Consensus 267 ~lgt~~~~d~l----v~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~--~~-~-~~~l~~~~~g------~ 332 (534)
++.+.. .-.. .+.......-..+.+++||+++++.... ...+.+.+++. +. . ...+.....+ .
T Consensus 157 d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 157 TVSDDG-HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EECTTS-CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCE
T ss_pred EecCCC-ceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCcEEEEeeccccCccccccCCc
Confidence 876521 1111 1111111223357899999998876533 34567777643 32 1 1112111111 1
Q ss_pred -eEEEeeeCCEEEEEEcCCCCCccEEEEEeCC--CCCCceE-EecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEE
Q 009441 333 -DTAASHRGNHFFITRRSDELFNSELLACPVD--NTSETTV-LIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYR 406 (534)
Q Consensus 333 -~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~--~~~~~~~-li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~ 406 (534)
...++++|+.+|+.... ...|...+++ +...... .++... .+..+.+.+ +.|++....++.-.++.++
T Consensus 234 ~~i~~s~dg~~l~v~~~~----~~~i~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 234 ADIHITPDGRHLYACDRT----ASLITVFSVSEDGSVLSKEGFQPTET--QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEECTTSSEEEEEETT----TTEEEEEEECTTSCCEEEEEEEECSS--SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred cceEECCCCCEEEEEecC----CCEEEEEEEcCCCCceEEeeeecCCC--ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 13367778877665432 2455555554 2111111 233322 256677764 4566666556655566556
Q ss_pred CCC
Q 009441 407 LPA 409 (534)
Q Consensus 407 l~~ 409 (534)
..+
T Consensus 308 ~~~ 310 (343)
T 1ri6_A 308 GEQ 310 (343)
T ss_dssp TTT
T ss_pred CCC
Confidence 553
No 65
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.07 E-value=0.00043 Score=68.06 Aligned_cols=116 Identities=15% Similarity=0.196 Sum_probs=71.0
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC-------ccceeEEccCC-eEEEEEEC----CC--
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-------VTASVEWAGNE-ALVYITMD----EI-- 257 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~-------~~~~~~Ws~Dg-~l~Y~~~d----~~-- 257 (534)
...+.+||||++++++...+| +|+++|+++|+.+.. .+.. ....++|+||| .+|....+ ..
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~----~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYG----DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTT----EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CceeEECCCCCEEEEEeCCCC----cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 345789999998887765433 699999999986542 2221 12458999999 55555432 00
Q ss_pred -CCCceEEEeecCCCCCC-ceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 258 -LRPDKAWLHKLEADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 258 -~r~~~v~~~~lgt~~~~-d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
.....|+.+++.++... ....+.. +.....+.+++||+ +++.. .+++++++.+++
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~-l~~~~-----~~i~~~d~~~~~ 177 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGS-LYVAG-----PDIYKMDVKTGK 177 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSC-EEEES-----SSEEEECTTTCC
T ss_pred ccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCCc-EEEcc-----CcEEEEeCCCCc
Confidence 01247888888764211 1122322 22223467899999 66532 238999987764
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.06 E-value=0.0099 Score=58.14 Aligned_cols=247 Identities=9% Similarity=0.057 Sum_probs=131.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|+|||+ |.++-..+ ..|+++|+++|+..... .......++|++||.+++...........|++++..
T Consensus 46 ~~~~~~~~~~g~-l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDVFE----GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CEEEEEECTTSC-EEEEETTT----CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred cccCcEECCCCC-EEEEECCC----CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 356789999999 33332222 27999999988765321 122334589999997776654321123478888876
Q ss_pred CCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecC---cceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEE
Q 009441 270 ADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASES---KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 344 (534)
Q Consensus 270 t~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~---~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~ly 344 (534)
+... ..++... ......++.+++||+.++..... .....||.++.++.. +..+........ ..++++|+.+|
T Consensus 121 ~~~~--~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 121 GDNL--QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp SCSC--EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESSEEEEEECTTSSEEE
T ss_pred CCEE--EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-EEEeecCCCcccceEECCCCCEEE
Confidence 5531 2122211 11233457889999865543321 124579999876644 444432211111 23567777888
Q ss_pred EEEcCCCCCccEEEEEeCCC-CCCce-----EEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCccccc
Q 009441 345 ITRRSDELFNSELLACPVDN-TSETT-----VLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSL 417 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~-~~~~~-----~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~ 417 (534)
+.... +.+|.+++++. ..... ............++.+.. +.|++....++ .|.+++.+ |+.+
T Consensus 198 v~~~~----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~--~v~~~d~~--g~~~--- 266 (333)
T 2dg1_A 198 VTETT----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG--RVLVFNKR--GYPI--- 266 (333)
T ss_dssp EEEGG----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT--EEEEECTT--SCEE---
T ss_pred EEeCC----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC--EEEEECCC--CCEE---
Confidence 76542 24677777642 11110 011111112466677764 45666654444 57777775 5532
Q ss_pred CCCceeeecCc-------eeeEeCCCCccCccEEEEEeccC--CCCCeEEEEECC
Q 009441 418 QGGKSVEFIDP-------VYSIDPSESVFSSRILRFHYSSL--RTPPSVYDYDMD 463 (534)
Q Consensus 418 ~~~~~i~lp~~-------~~~i~~~~~~~~~~~l~~~~sS~--~~P~~~y~~d~~ 463 (534)
..+.++.. ...+. + +.+++.|+++-..- .....+|++++.
T Consensus 267 ---~~~~~~~~~~g~~~~~~~~~-~--~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 267 ---GQILIPGRDEGHMLRSTHPQ-F--IPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp ---EEEECTTGGGTCSCBCCEEE-E--CTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ---EEEEcCCCccccccCcceEE-E--CCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 23444321 11121 1 23455677655442 234577887764
No 67
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.03 E-value=0.00055 Score=68.24 Aligned_cols=160 Identities=11% Similarity=0.165 Sum_probs=83.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC--CC----C-ee------ccccC-C-ccceeEEccCCeEEEEEECCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--TG----T-PV------GKPLV-G-VTASVEWAGNEALVYITMDEI 257 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~--tg----~-~~------~~~i~-~-~~~~~~Ws~Dg~l~Y~~~d~~ 257 (534)
+..+.+||||++|+++.. |+. .+++++++ ++ + .. ...+. + ....++|+|||.++|+....
T Consensus 157 ~~~~~~spdg~~l~~~~~--~~~--~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~- 231 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDL--GTD--QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI- 231 (361)
T ss_dssp EEEEEECTTSSEEEEEET--TTT--EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-
T ss_pred ceEEEECCCCCEEEEEeC--CCC--EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-
Confidence 456799999999887644 333 45555554 43 2 21 11111 1 22358999999555555321
Q ss_pred CCCceEEEeecCCCCCCceEeee--e-cC-CceEEEEEEcCCCcEEEEEecC-cceeEEEEEeCCCCCceeEeeecccc-
Q 009441 258 LRPDKAWLHKLEADQSNDICLYH--E-KD-DIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPEELRVLTPRVVG- 331 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~lv~~--e-~d-~~~~v~~~~S~Dg~~l~i~~~~-~~~~ev~~~d~~~~~~~~~l~~~~~g- 331 (534)
...|+.+++.++. -..+.. . .. ...-..+.+||||++|++.... ...-.+|-++..++. ++.+.....+
T Consensus 232 --~~~v~v~~~~~g~--~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~g~ 306 (361)
T 3scy_A 232 --GGTVIAFRYADGM--LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLTGI 306 (361)
T ss_dssp --TCEEEEEEEETTE--EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEECSS
T ss_pred --CCeEEEEEecCCc--eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecCCC
Confidence 2356666665331 111111 0 11 1112357899999998765443 333445555544443 3333211111
Q ss_pred -e-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCC
Q 009441 332 -V-DTAASHRGNHFFITRRSDELFNSELLACPVDN 364 (534)
Q Consensus 332 -~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~ 364 (534)
. ...++++|..||+.... .....++.++.++
T Consensus 307 ~~~~~~~spdg~~l~~~~~~--~~~v~v~~~d~~~ 339 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVACRD--TNVIQIFERDQAT 339 (361)
T ss_dssp CCCEEEECTTSCEEEEEETT--TTEEEEEEECTTT
T ss_pred CCceEEECCCCCEEEEEECC--CCCEEEEEEECCC
Confidence 1 23477888877765532 3455666677654
No 68
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.03 E-value=0.0032 Score=67.08 Aligned_cols=250 Identities=12% Similarity=0.044 Sum_probs=131.6
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEEC--CCCCeeccccC-C-ccceeEEcc----CCeEEEEEECCCCCCceEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDI--ETGTPVGKPLV-G-VTASVEWAG----NEALVYITMDEILRPDKAW 264 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl--~tg~~~~~~i~-~-~~~~~~Ws~----Dg~l~Y~~~d~~~r~~~v~ 264 (534)
+..+.+||||++|+.+.. + .+|.++|+ ++++.+.. ++ + ....++++| ||.++|+.... +..|.
T Consensus 181 ~~~v~~spdg~~l~v~~~-d----~~V~v~D~~~~t~~~~~~-i~~g~~p~~va~sp~~~~dg~~l~v~~~~---~~~v~ 251 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGR-D----ARIDMIDLWAKEPTKVAE-IKIGIEARSVESSKFKGYEDRYTIAGAYW---PPQFA 251 (543)
T ss_dssp EEEEEECTTSCEEEEEET-T----SEEEEEETTSSSCEEEEE-EECCSEEEEEEECCSTTCTTTEEEEEEEE---SSEEE
T ss_pred cceEEECCCCCEEEEECC-C----CeEEEEECcCCCCcEEEE-EecCCCcceEEeCCCcCCCCCEEEEEEcc---CCeEE
Confidence 556789999999887643 2 46999999 78876542 32 2 234589999 99666665421 23566
Q ss_pred EeecCCCCCCceEeee--ec-------CCc-eEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCcee-Eeeecccce-
Q 009441 265 LHKLEADQSNDICLYH--EK-------DDI-YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-VLTPRVVGV- 332 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~--e~-------d~~-~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~-~l~~~~~g~- 332 (534)
.++..+... .-.+. .. .+. ....+..|+|++.++++. ..+..|++++..+.+.++ ...+.....
T Consensus 252 v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~--~~~g~i~vvd~~~~~~l~~~~i~~~~~~~ 327 (543)
T 1nir_A 252 IMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV--KETGKVLLVNYKDIDNLTVTSIGAAPFLH 327 (543)
T ss_dssp EEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE--TTTTEEEEEECTTSSSCEEEEEECCSSCC
T ss_pred EEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEEE--CCCCeEEEEEecCCCcceeEEeccCcCcc
Confidence 667655421 11111 00 011 234577899999877654 335689999987754122 011111111
Q ss_pred eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecC----CCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEE
Q 009441 333 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH----RESVKLQDIQLFI--DHLAVYEREGGLQKITTYR 406 (534)
Q Consensus 333 ~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~----~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~ 406 (534)
...++++|..||+..+. ...|..+|+.+.... ..++- ...... .+ ... +.+++... .+...|.+++
T Consensus 328 ~~~~spdg~~l~va~~~----~~~v~v~D~~tg~l~-~~i~~g~~ph~g~g~-~~-~~p~~g~~~~s~~-~~d~~V~v~d 399 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANN----SNKVAVIDSKDRRLS-ALVDVGKTPHPGRGA-NF-VHPKYGPVWSTSH-LGDGSISLIG 399 (543)
T ss_dssp CEEECTTSCEEEEEEGG----GTEEEEEETTTTEEE-EEEECSSSBCCTTCE-EE-EETTTEEEEEEEB-SSSSEEEEEE
T ss_pred CceECCCCCEEEEEecC----CCeEEEEECCCCeEE-EeeccCCCCCCCCCc-cc-CCCCCccEEEecc-CCCceEEEEE
Confidence 23477888777665542 245777887654321 12331 111111 12 233 35554443 2334688888
Q ss_pred CCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCC-----eEEEEECCCCcE
Q 009441 407 LPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPP-----SVYDYDMDMGIS 467 (534)
Q Consensus 407 l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~-----~~y~~d~~~~~~ 467 (534)
.++.+..-..+...+.+..+... .. .+...++++.+++. +...|. +|..+|.++++.
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~-~~-~v~~~pdg~~l~v~--~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGG-SL-FIKTHPKSSHLYVD--TTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSC-CC-CEECCTTCCEEEEC--CTTCSSHHHHTCEEEEETTCTTS
T ss_pred eCCCCCchhcCeEEEEEEcCCCC-ce-EEEcCCCCCcEEEe--cCCCCCcccCceEEEEECCCCCC
Confidence 87522110001111234332211 11 12234567766643 334453 899999988763
No 69
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.01 E-value=0.00047 Score=67.36 Aligned_cols=133 Identities=13% Similarity=-0.003 Sum_probs=77.6
Q ss_pred EEEEEECCCCCeecc-ccCC---ccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCCCCceEeeeecCCc----eEE
Q 009441 218 TVYVIDIETGTPVGK-PLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDI----YSL 288 (534)
Q Consensus 218 ~l~v~dl~tg~~~~~-~i~~---~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~----~~v 288 (534)
+|+++|+++++.+.. .+.+ ....++|+||| .+|++... ...|+.+++.++.. ...+.-..+. ...
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK----SESLVKIDLVTGET--LGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT----TTEEEEEETTTCCE--EEEEECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC----CCeEEEEECCCCCe--EeeEEcCCccccccccc
Confidence 699999999987653 2333 23469999999 55555422 34788888876531 1112211100 112
Q ss_pred EEEEcCCCcEEEEEecC------c---ceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcCCCCCccEEE
Q 009441 289 GLQASESKKFLFIASES------K---ITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELL 358 (534)
Q Consensus 289 ~~~~S~Dg~~l~i~~~~------~---~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~~~~~~~~L~ 358 (534)
.+.+++||++|++.... . ....|+++++.+++ .....+..... ...++++|..+|+. + ..|.
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~------~~i~ 157 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEAPRQITMLAWARDGSKLYGL-G------RDLH 157 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEECCSSCCCEEECTTSSCEEEE-S------SSEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeCCCCcceeEECCCCCEEEEe-C------CeEE
Confidence 46789999998876421 1 24689999997754 22222221122 23477788877766 2 2466
Q ss_pred EEeCCC
Q 009441 359 ACPVDN 364 (534)
Q Consensus 359 ~~~~~~ 364 (534)
.+++.+
T Consensus 158 ~~d~~~ 163 (337)
T 1pby_B 158 VMDPEA 163 (337)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 666654
No 70
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.99 E-value=0.0015 Score=66.07 Aligned_cols=241 Identities=15% Similarity=0.115 Sum_probs=124.9
Q ss_pred EEECCCCCEEEEEEc-----CCCCeEEEEEEEECCCCCeecc-ccCC--------ccceeEEccCCeEEEEEECCCCCCc
Q 009441 196 FQVSPDNKLVAYAED-----TKGDEIYTVYVIDIETGTPVGK-PLVG--------VTASVEWAGNEALVYITMDEILRPD 261 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d-----~~G~E~~~l~v~dl~tg~~~~~-~i~~--------~~~~~~Ws~Dg~l~Y~~~d~~~r~~ 261 (534)
+.+||||++|..+-. ..|.+...+.++|+++++.+.. .++. .-..++++|||+.+|+.+.. ...
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~--~~~ 160 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--PAP 160 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS--SSC
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC--CCC
Confidence 789999998877643 1244456899999999987653 2221 13458999999666666421 123
Q ss_pred eEEEeecCCCCCCce-------EeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEe-CCCCCceeEeeeccccee
Q 009441 262 KAWLHKLEADQSNDI-------CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD-VSKPEELRVLTPRVVGVD 333 (534)
Q Consensus 262 ~v~~~~lgt~~~~d~-------lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d-~~~~~~~~~l~~~~~g~~ 333 (534)
.|...++.+.....+ .++.... ..+ +..++||+.+++.......- +-... .-... -..+. ..
T Consensus 161 ~VsVID~~t~~vv~tI~v~g~~~~~P~g~-~~~--~~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~-~~~~~---~~-- 230 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPDCYHIFPTAP-DTF--FMHCRDGSLAKVAFGTEGTP-EITHTEVFHPE-DEFLI---NH-- 230 (386)
T ss_dssp EEEEEETTTTEEEEEEECCSEEEEEEEET-TEE--EEEETTSCEEEEECCSSSCC-EEEECCCCSCT-TSCBC---SC--
T ss_pred eEEEEECCCCcEEEEEECCCcceeecCCC-cee--EEECCCCCEEEEECCCCCeE-EEeecceeccc-ccccc---cc--
Confidence 566667655421111 1121111 112 25688999888765432221 11000 00000 00000 00
Q ss_pred EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCC---ceE-Ee----------cCCCCceeeeEEEeCCEEEEEEeeC--
Q 009441 334 TAASHRGNHFFITRRSDELFNSELLACPVDNTSE---TTV-LI----------PHRESVKLQDIQLFIDHLAVYEREG-- 397 (534)
Q Consensus 334 ~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~---~~~-li----------~~~~~~~l~~~~~~~~~lv~~~~~~-- 397 (534)
..+...++++++.+.. ++++.+|+.+... ..| ++ |.. .....+.-.+++||+....+
T Consensus 231 ~~~~~~dG~~~~vs~~-----g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g--~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 231 PAYSQKAGRLVWPTYT-----GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG--WQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp CEEETTTTEEEEEBTT-----SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS--SSCEEEETTTTEEEEEEEECCT
T ss_pred ceeEcCCCcEEEEeCC-----CEEEEEECCCCcceeecceeccccccccccccCCC--cceeeECCCCCeEEEEeccccc
Confidence 0122234566666652 4677777754321 122 11 111 11222322347888877543
Q ss_pred -----CeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 398 -----GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 398 -----g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
...+|+++|+.+ ++.+ +.|.++...+.+ ..+.+++.++|..+. .-..+..+|.++++.
T Consensus 304 ~~hk~~~~~V~viD~~t-~kv~------~~i~vg~~~~~l---avs~D~~~~ly~tn~--~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKT-GERL------AKFEMGHEIDSI---NVSQDEKPLLYALST--GDKTLYIHDAESGEE 366 (386)
T ss_dssp TCTTSCEEEEEEEETTT-CCEE------EEEEEEEEECEE---EECSSSSCEEEEEET--TTTEEEEEETTTCCE
T ss_pred cccCCCCCEEEEEECCC-CeEE------EEEECCCCcceE---EECCCCCeEEEEEcC--CCCeEEEEECCCCcE
Confidence 346899999986 5543 356654433223 234455534443332 246789999999884
No 71
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.97 E-value=0.0082 Score=58.92 Aligned_cols=194 Identities=10% Similarity=0.105 Sum_probs=110.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc-c-CCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-L-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~-i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.++|+++++|-+.. + .+|+++|+.+|+.+... . ......++|+|||.++.+... ...+..+++.
T Consensus 82 ~v~~~~~~~~~~~l~s~s~-D----~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~----dg~v~i~~~~ 152 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSL-D----AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH----VGKVNIFGVE 152 (321)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT----TSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEeC-C----CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC----CCcEEEEEcC
Confidence 4677899999998875533 2 37999999999765421 1 112335899999954444422 2367777876
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
++. ....+.. .......+.++|||++|+..+.+ ..|.+.|+.++.....+......+. ..+++++..|+. ..
T Consensus 153 ~~~--~~~~~~~-~~~~v~~~~~spdg~~lasg~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s-~s 225 (321)
T 3ow8_A 153 SGK--KEYSLDT-RGKFILSIAYSPDGKYLASGAID---GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT-AS 225 (321)
T ss_dssp TCS--EEEEEEC-SSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE-EC
T ss_pred CCc--eeEEecC-CCceEEEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE-Ec
Confidence 552 2222322 23345568899999998765543 3577778876541222222221122 235666664433 22
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
. .+.|...++....... .+..... .+..+.+.++ ..++....++. |.++++.+
T Consensus 226 ~----dg~i~iwd~~~~~~~~-~~~~h~~-~v~~~~~sp~~~~l~s~s~D~~--v~iwd~~~ 279 (321)
T 3ow8_A 226 D----DGYIKIYDVQHANLAG-TLSGHAS-WVLNVAFCPDDTHFVSSSSDKS--VKVWDVGT 279 (321)
T ss_dssp T----TSCEEEEETTTCCEEE-EECCCSS-CEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred C----CCeEEEEECCCcceeE-EEcCCCC-ceEEEEECCCCCEEEEEeCCCc--EEEEeCCC
Confidence 2 2345556665432211 2322222 4777887653 45666666774 66678774
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.97 E-value=0.0057 Score=61.86 Aligned_cols=195 Identities=11% Similarity=0.089 Sum_probs=113.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++||.+... | .|+|+|+.+++.+... -......+.| ++.++++... ...|+.|++.
T Consensus 136 ~v~~v~~s~~~~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~----dg~i~i~d~~ 204 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGN-G----LVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR----SGAIHHHDVR 204 (401)
T ss_dssp CEEEEEECTTSSEEEEEETT-S----CEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET----TSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEECCC-C----eEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC----CCCEEEEecc
Confidence 47788999999999987653 3 6999999999866531 1222345888 4445555432 2478888886
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
+.. .....+.. .......+.+++|+++++....+ ..|++.++.+......+......+. ..+.+++..+++...
T Consensus 205 ~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 205 IAN-HQIGTLQG-HSSEVCGLAWRSDGLQLASGGND---NVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp SSS-CEEEEEEC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEEC
T ss_pred cCc-ceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCC---CeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEec
Confidence 432 22223332 22334468899999998765543 3577888876541222322222222 235666777766553
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEE-eeCCeeEEEEEECCC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYE-REGGLQKITTYRLPA 409 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~-~~~g~~~l~~~~l~~ 409 (534)
+..++.|...++.+.... ..+... ..+..+.+..+ .|+... ..+| .|.++++..
T Consensus 280 --gs~d~~i~i~d~~~~~~~-~~~~~~--~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~ 336 (401)
T 4aez_A 280 --GTMDKQIHFWNAATGARV-NTVDAG--SQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSS 336 (401)
T ss_dssp --CTTTCEEEEEETTTCCEE-EEEECS--SCEEEEEECSSSSEEEEEECTTTC--EEEEEEEET
T ss_pred --CCCCCEEEEEECCCCCEE-EEEeCC--CcEEEEEECCCCCeEEEEeecCCC--cEEEEecCC
Confidence 234567878887654321 133332 24778888653 444432 2455 466666653
No 73
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.96 E-value=0.0052 Score=59.64 Aligned_cols=187 Identities=16% Similarity=0.114 Sum_probs=109.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|+|||++|+.+.. +| .++++|+.+++.+... ..+....++|+||+.++++... ...|+.+++.
T Consensus 143 ~i~~~~~~~~~~~l~~~~~-dg----~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~ 213 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCS-DG----NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLR 213 (337)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeC-CC----cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec----CCcEEEEECC
Confidence 3677899999999998754 33 5999999998765421 1222345899999955555432 2368888876
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
+.. ....+. .+.....+.+++|++++++...+ ..+++.++.++. ...+......+. ..+++++..|+..+.
T Consensus 214 ~~~--~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~---~~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 214 EGR--QLQQHD--FTSQIFSLGYCPTGEWLAVGMES---SNVEVLHVNKPD-KYQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp TTE--EEEEEE--CSSCEEEEEECTTSSEEEEEETT---SCEEEEETTSSC-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCc--eEeeec--CCCceEEEEECCCCCEEEEEcCC---CcEEEEECCCCC-eEEEcCCccceeEEEECCCCCEEEEecC
Confidence 542 122222 22334467899999998876543 357888887754 333332222222 235666776654443
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEE
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKIT 403 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~ 403 (534)
++.|...++..... .....+ ...+..+.+.++ .+++....+|.-+++
T Consensus 286 -----dg~i~~~~~~~~~~-~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 286 -----DNLLNAWRTPYGAS-IFQSKE--SSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp -----TSEEEEEETTTCCE-EEEEEC--SSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred -----CCcEEEEECCCCeE-EEEecC--CCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 24566677654321 122332 224777777653 455556566644443
No 74
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.96 E-value=0.0068 Score=61.26 Aligned_cols=196 Identities=9% Similarity=0.059 Sum_probs=108.8
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++||.+.. + .+|+++|+.+++.+... -.+....++|+||+.++++...+ ..|..+++.
T Consensus 141 ~v~~~~~~~~~~~l~s~s~-d----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~ 211 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQ-D----MQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD----GTIRLWECG 211 (420)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT----SCEEEEETT
T ss_pred ccEEEEECCCCCEEEEEeC-C----CeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC----CcEEEeECC
Confidence 5778899999999887644 2 37999999998765421 12223459999999544454322 246666665
Q ss_pred CCCCCceEeeeec--CCce---------------------EEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEee
Q 009441 270 ADQSNDICLYHEK--DDIY---------------------SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT 326 (534)
Q Consensus 270 t~~~~d~lv~~e~--d~~~---------------------~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~ 326 (534)
++. ....+... .... ...+.+++||++|+....+ ..|.+.++..+.....+.
T Consensus 212 ~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 212 TGT--TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS---GVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp TTE--EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT---SCEEEEETTTCCEEEEEC
T ss_pred CCc--eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC---CeEEEEECCCCceeEEcc
Confidence 442 12222210 0000 1123468999998765433 347778887654222222
Q ss_pred eccccee--EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEE
Q 009441 327 PRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKIT 403 (534)
Q Consensus 327 ~~~~g~~--~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~ 403 (534)
....+.. ..+++++..+++.... ++.|...++.+....-. +..+. ...+..+.+.++.+++....+|. |.
T Consensus 287 ~~~~~~v~~~~~~~~~~~~l~~g~~----dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~l~s~~~d~~--v~ 359 (420)
T 3vl1_A 287 SKFTCSCNSLTVDGNNANYIYAGYE----NGMLAQWDLRSPECPVGEFLINE-GTPINNVYFAAGALFVSSGFDTS--IK 359 (420)
T ss_dssp CTTSSCEEEEEECSSCTTEEEEEET----TSEEEEEETTCTTSCSEEEEEST-TSCEEEEEEETTEEEEEETTTEE--EE
T ss_pred cccCCCceeEEEeCCCCCEEEEEeC----CCeEEEEEcCCCcCchhhhhccC-CCCceEEEeCCCCEEEEecCCcc--EE
Confidence 2212212 2356666633333332 25677778765432111 33222 33477776667778888877775 44
Q ss_pred EEECC
Q 009441 404 TYRLP 408 (534)
Q Consensus 404 ~~~l~ 408 (534)
++++.
T Consensus 360 iw~~~ 364 (420)
T 3vl1_A 360 LDIIS 364 (420)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 55555
No 75
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.95 E-value=0.0032 Score=62.99 Aligned_cols=209 Identities=11% Similarity=0.067 Sum_probs=106.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC-CCCeecc-c--cCCccceeEEccCCe--EEEEEECC-----CC---
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGK-P--LVGVTASVEWAGNEA--LVYITMDE-----IL--- 258 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~-tg~~~~~-~--i~~~~~~~~Ws~Dg~--l~Y~~~d~-----~~--- 258 (534)
+..+.+||||++|+.+ +.+ .+.++|++ +|+.... . ..+....++|+|||. ++|+.... ..
T Consensus 42 ~~~~a~spdg~~l~~~-~~~-----~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 42 ISWMTFDHERKNIYGA-AMK-----KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CSEEEECTTSSEEEEE-EBT-----EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CcEEEECCCCCEEEEE-ccc-----eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 4457899999988644 332 68889987 7765431 1 113233488999994 34443200 00
Q ss_pred -CCceEEEeecCC-CCCCce-EeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC-CCCceeEeeec-----c
Q 009441 259 -RPDKAWLHKLEA-DQSNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS-KPEELRVLTPR-----V 329 (534)
Q Consensus 259 -r~~~v~~~~lgt-~~~~d~-lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~-~~~~~~~l~~~-----~ 329 (534)
....+..+++.. +..... .++..........+.+||||++|++... ....|++.+++ +++ +..+... .
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~--~~~~v~~~~~~~~g~-~~~~~~~~~~~~g 192 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL--TANKLWTHRKLASGE-VELVGSVDAPDPG 192 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSC-EEEEEEEECSSTT
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC--CCCEEEEEEECCCCC-EEEeeeEecCCCC
Confidence 123455555542 211111 1111112223446789999999876432 23568888876 544 3322111 1
Q ss_pred ccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCc----eE-EecCCC-C-c-------eeeeEE-EeC--CEEE
Q 009441 330 VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET----TV-LIPHRE-S-V-------KLQDIQ-LFI--DHLA 391 (534)
Q Consensus 330 ~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~----~~-li~~~~-~-~-------~l~~~~-~~~--~~lv 391 (534)
.+.. ..++++|..+|+.... ...-.++.++.++.... .. .++... . . ...++. +.+ ++|+
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEA--GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCEeEECCCCCEEEEEECC--CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 2222 3377888888776542 23344554544332211 11 223221 1 1 366777 665 3676
Q ss_pred EEEeeCCe---eEEEEEECCCCCC
Q 009441 392 VYEREGGL---QKITTYRLPAVGE 412 (534)
Q Consensus 392 ~~~~~~g~---~~l~~~~l~~~g~ 412 (534)
+..+.+.. ..|.+++++..|+
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTTSC
T ss_pred EECCCCCCCCCCeEEEEEECCCCC
Confidence 65543321 1567777652254
No 76
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.92 E-value=0.0016 Score=65.07 Aligned_cols=194 Identities=9% Similarity=0.028 Sum_probs=109.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.|..+.|||||++||-+.. +| +|+|+|+.+|+.+.. +. +....++|++++ .++.+...+ ..|..++
T Consensus 129 ~V~~v~~spdg~~l~sgs~-d~----~i~iwd~~~~~~~~~-~~~h~~~V~~~~~~~~~~~~l~s~s~D----~~v~iwd 198 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSK-DI----CIKVWDLAQQVVLSS-YRAHAAQVTCVAASPHKDSVFLSCSED----NRILLWD 198 (344)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----CEEEEETTTTEEEEE-ECCCSSCEEEEEECSSCTTEEEEEETT----SCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeC-CC----eEEEEECCCCcEEEE-EcCcCCceEEEEecCCCCCceeeeccc----ccccccc
Confidence 4677899999999987644 23 699999999987652 22 223458999998 777776432 3577778
Q ss_pred cCCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEE
Q 009441 268 LEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 268 lgt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi 345 (534)
+.++.. ...+... .......+.+++++..+++.... ...|.+.|+.+++....+......+. ..+++++..+++
T Consensus 199 ~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~--dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~la 274 (344)
T 4gqb_B 199 TRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE--NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLA 274 (344)
T ss_dssp TTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEET--TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEE
T ss_pred ccccce--eeeeecceeeccceeeeecCCCCcceEEecc--CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEE
Confidence 876532 2222211 12223457788865544443322 23577778876542333333222222 225667766544
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECC
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~ 408 (534)
....+ +.|...|+..... .......+ .+..+.+.+ ..|++....||. |.+.+++
T Consensus 275 sgs~D----~~i~vwd~~~~~~--~~~~~H~~-~V~~v~~sp~~~~llas~s~D~~--v~~w~v~ 330 (344)
T 4gqb_B 275 SLSED----CSLAVLDSSLSEL--FRSQAHRD-FVRDATWSPLNHSLLTTVGWDHQ--VVHHVVP 330 (344)
T ss_dssp EEETT----SCEEEECTTCCEE--EEECCCSS-CEEEEEECSSSTTEEEEEETTSC--EEEEECC
T ss_pred EEeCC----CeEEEEECCCCcE--EEEcCCCC-CEEEEEEeCCCCeEEEEEcCCCe--EEEEECC
Confidence 43332 3455556644221 11222223 478888864 467878877885 4455665
No 77
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.92 E-value=0.004 Score=66.64 Aligned_cols=255 Identities=11% Similarity=0.028 Sum_probs=136.1
Q ss_pred EEEEEEC----CCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC------------ccceeEEccCCeEEEEEEC
Q 009441 193 VGCFQVS----PDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG------------VTASVEWAGNEALVYITMD 255 (534)
Q Consensus 193 l~~~~~S----PDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~------------~~~~~~Ws~Dg~l~Y~~~d 255 (534)
...+.+| |||++|..+-...| ++.|+|.++.+.+.. .+.+ ....+..++++..++....
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~----~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPP----QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETT----EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CceeEEccccCCCCCEEEEEEccCC----eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 3467899 79999988755443 578999999887652 1111 1234666777733344433
Q ss_pred CCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec-----cc
Q 009441 256 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-----VV 330 (534)
Q Consensus 256 ~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~-----~~ 330 (534)
+ ..+|+..+..+.. ...+-.-....+..++.+++||+|+++..+. .+.|.++|+.+++ +....+- ..
T Consensus 318 ~---~g~v~~vd~~~~~--~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~--sn~V~ViD~~t~k-l~~~i~vgg~~Php 389 (567)
T 1qks_A 318 E---TGKILLVDYTDLN--NLKTTEISAERFLHDGGLDGSHRYFITAANA--RNKLVVIDTKEGK-LVAIEDTGGQTPHP 389 (567)
T ss_dssp T---TTEEEEEETTCSS--EEEEEEEECCSSEEEEEECTTSCEEEEEEGG--GTEEEEEETTTTE-EEEEEECSSSSBCC
T ss_pred C---CCeEEEEecCCCc--cceeeeeeccccccCceECCCCCEEEEEeCC--CCeEEEEECCCCc-EEEEEeccCcCCCC
Confidence 2 2477777765431 1122221223455567899999999886543 4578999998765 2222221 01
Q ss_pred --ceeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCC--CceE-E---ecCCCCceeeeEEEeC--CEEEEEEeeCC--
Q 009441 331 --GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS--ETTV-L---IPHRESVKLQDIQLFI--DHLAVYEREGG-- 398 (534)
Q Consensus 331 --g~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~--~~~~-l---i~~~~~~~l~~~~~~~--~~lv~~~~~~g-- 398 (534)
|.. .+.++++.+|+.++. +. ..|..++.+... ...| + ++-.... -..+...+ .+|++....+.
T Consensus 390 g~g~~-~~~p~~g~v~~t~~~-g~--~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-~~~i~~~p~~~~l~v~~~~~~~~ 464 (567)
T 1qks_A 390 GRGAN-FVHPTFGPVWATSHM-GD--DSVALIGTDPEGHPDNAWKILDSFPALGGG-SLFIKTHPNSQYLYVDATLNPEA 464 (567)
T ss_dssp TTCEE-EEETTTEEEEEEEBS-SS--SEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCSEEEEECTTCSSH
T ss_pred cccee-eECCCCCcEEEeCCC-CC--CeEEEecCCCCCCccccCEEEEEEecCCCC-CEEEEeCCCCCeEEEecCCCCCc
Confidence 212 244556778766654 22 456667665311 1124 2 2211110 01122233 47777664332
Q ss_pred --eeEEEEEECCCC---CCcccccCCCceee------ecCceeeEeCCCCccCccEEEEEecc-CCCCCeEEEEECCCCc
Q 009441 399 --LQKITTYRLPAV---GEPLKSLQGGKSVE------FIDPVYSIDPSESVFSSRILRFHYSS-LRTPPSVYDYDMDMGI 466 (534)
Q Consensus 399 --~~~l~~~~l~~~---g~~~~~~~~~~~i~------lp~~~~~i~~~~~~~~~~~l~~~~sS-~~~P~~~y~~d~~~~~ 466 (534)
...|.+++..+. |... ..+.+. +++.+..+..+..+.+++.++++.-+ -.....|..+|.++++
T Consensus 465 ~~~~~v~v~d~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 465 EISGSVAVFDIKAMTGDGSDP----EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp HHHTCEEEEEGGGCCCSSSCC----CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCceEEEEECCcccccccCC----CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 346888888641 1100 001221 22222112112334568888887533 2356889999999887
Q ss_pred EE
Q 009441 467 SV 468 (534)
Q Consensus 467 ~~ 468 (534)
+.
T Consensus 541 ~~ 542 (567)
T 1qks_A 541 LK 542 (567)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 78
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.91 E-value=0.019 Score=55.42 Aligned_cols=194 Identities=11% Similarity=0.117 Sum_probs=110.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.|||||++||.+.. +| .++|+|+.+++.... +. .....++|+||+.++++...+ ..|..+++
T Consensus 25 ~v~~~~~s~~~~~l~s~~~-dg----~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d----~~i~vwd~ 94 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSA-DK----LIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDD----KTLKIWDV 94 (312)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----CEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEET
T ss_pred cEEEEEECCCCCEEEEeeC-CC----eEEEEeCCCcccchh-hccCCCceEEEEEcCCCCEEEEECCC----CEEEEEEC
Confidence 4778899999999987654 33 599999998876542 22 223459999999555555332 36777787
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~t 347 (534)
.++. ....+.. .......+.+++++++|+....+ ..|.+.++.++.....+......+. ..+.+++..|+..+
T Consensus 95 ~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 95 SSGK--CLKTLKG-HSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp TTCC--EEEEEEC-CSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCc--EEEEEcC-CCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 6652 2222332 22334457889999988765433 3477778876542222222222222 22556666554433
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
. + +.|...++.+......+.. .....+..+.+.++ ..++....+| .|.++++..
T Consensus 169 ~-d----~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~--~i~iwd~~~ 223 (312)
T 4ery_A 169 Y-D----GLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDN--TLKLWDYSK 223 (312)
T ss_dssp T-T----SCEEEEETTTCCEEEEECC-SSCCCEEEEEECTTSSEEEEEETTT--EEEEEETTT
T ss_pred C-C----CcEEEEECCCCceeeEEec-cCCCceEEEEECCCCCEEEEEcCCC--eEEEEECCC
Confidence 3 2 3566667654321111222 22234666666543 4455555566 467778874
No 79
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.89 E-value=0.0046 Score=62.03 Aligned_cols=119 Identities=18% Similarity=0.150 Sum_probs=67.9
Q ss_pred CCCCCEEEEEEcCCCC--eEEEEEEEECCCCCeeccccC-CccceeEEccCCeEEEEEEC--C----CCCCceEEEeecC
Q 009441 199 SPDNKLVAYAEDTKGD--EIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMD--E----ILRPDKAWLHKLE 269 (534)
Q Consensus 199 SPDG~~LA~~~d~~G~--E~~~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg~l~Y~~~d--~----~~r~~~v~~~~lg 269 (534)
.||+++ +|..+.+.+ ....++++|.++|+.+. .++ +....++++|||+++|+... . ..+...|..+++.
T Consensus 12 ~~~~~~-~yv~~~~~~~~~d~~v~v~D~~t~~~~~-~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 12 APQENR-IYVMDSVFMHLTESRVHVYDYTNGKFLG-MVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp SCGGGE-EEEEECCGGGGGGCEEEEEETTTCCEEE-EEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCCCE-EEEECCCCCccccCeEEEEECCCCeEEE-EecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 357776 566664321 12489999999998765 343 22236999999976677642 1 0112357777876
Q ss_pred CCCCCceEeeeecC---CceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 270 ADQSNDICLYHEKD---DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 270 t~~~~d~lv~~e~d---~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
+......+-..... ...-..+.+||||++|++.... ..+.|.++|+++.+
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~-~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS-PATSIGIVDVAKGD 142 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-SSEEEEEEETTTTE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-CCCeEEEEECCCCc
Confidence 64321111111000 0011136789999999875322 24567888887654
No 80
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.89 E-value=0.021 Score=56.18 Aligned_cols=197 Identities=10% Similarity=0.039 Sum_probs=110.7
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~ 273 (534)
.++.|+||++.|.|+-..+| .|+++|.++|+......+.....++|++||.+++.. . ..|++++..++.
T Consensus 52 egp~~~~~~~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~-----~gl~~~d~~~g~- 120 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILER----ELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-D-----DGLFLRDTATGV- 120 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGT----EEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-T-----TEEEEEETTTCC-
T ss_pred cCCeEeCCCCEEEEEECCCC----EEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-C-----CCEEEEECCCCc-
Confidence 45789999888877644333 689999998875432233334558899999766654 2 258888876552
Q ss_pred CceEeeeec--CC-ceEEEEEEcCCCcEEEEEecC---cceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEE
Q 009441 274 NDICLYHEK--DD-IYSLGLQASESKKFLFIASES---KITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFIT 346 (534)
Q Consensus 274 ~d~lv~~e~--d~-~~~v~~~~S~Dg~~l~i~~~~---~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~ 346 (534)
-..+.... .+ ...-++.+++||+..+..... .....||.++ . +. ++.+....... ...++++|+.+|+.
T Consensus 121 -~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~-g~-~~~~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 121 -LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K-GK-VTKLFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp -EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T-TE-EEEEEEEESSEEEEEECTTSCEEEEE
T ss_pred -EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C-Cc-EEEeeCCCcccCCeEEcCCCCEEEEE
Confidence 12222211 11 223467889999965433221 1346799998 3 33 44443221111 12356778888876
Q ss_pred EcCCCCCccEEEEEeCC--CC-CCc--eEEec-CCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCc
Q 009441 347 RRSDELFNSELLACPVD--NT-SET--TVLIP-HRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEP 413 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~--~~-~~~--~~li~-~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~ 413 (534)
... +.+|.+++++ +. ... ..+.. ........++.+.. +.|++....++ .|.+++.+ |+.
T Consensus 197 ~~~----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~--~v~~~d~~--g~~ 262 (326)
T 2ghs_A 197 DTK----VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG--AVDRYDTD--GNH 262 (326)
T ss_dssp ETT----TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT--EEEEECTT--CCE
T ss_pred ECC----CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC--EEEEECCC--CCE
Confidence 432 3578888864 32 211 11211 11122456677754 45666554333 57888775 653
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.88 E-value=0.0041 Score=66.26 Aligned_cols=199 Identities=11% Similarity=0.081 Sum_probs=109.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC----Ceeccc--cCCc-cceeEEcc--CCeEEEEEECCCCCCceE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG----TPVGKP--LVGV-TASVEWAG--NEALVYITMDEILRPDKA 263 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg----~~~~~~--i~~~-~~~~~Ws~--Dg~l~Y~~~d~~~r~~~v 263 (534)
+..+.|||||++||++.+ | .++|+|++++ +.+... -.+. ...++|+| |+.++.+...+ ..|
T Consensus 21 v~~~~~spdg~~l~~~~~--~----~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d----g~v 90 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCG--K----SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES----GKV 90 (615)
T ss_dssp CCCCEEETTTTEEEEEET--T----EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT----SEE
T ss_pred eeEEEECCCCCEEEEecC--C----eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC----CEE
Confidence 566789999999999872 2 6999999988 544321 1223 34589999 99655555432 246
Q ss_pred EEeecCCCCC----CceEe--eeecCCceEEEEEEcCCCcEEEEEecCcc-eeEEEEEeCCCCCceeEeeeccccee-EE
Q 009441 264 WLHKLEADQS----NDICL--YHEKDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD-TA 335 (534)
Q Consensus 264 ~~~~lgt~~~----~d~lv--~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~-~~ev~~~d~~~~~~~~~l~~~~~g~~-~~ 335 (534)
..+++.++.. +..++ +.. .......+.+++||++|+....... ...+++.+... ....+......+. ..
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~--~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--SLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC--EEEECCSCSSCEEEEE
T ss_pred EEEeCCCCcccccccccccchhhc-ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC--cceeeecCCccEEEEE
Confidence 6666532200 01222 222 2223446789999999887665432 34677766322 2233332222222 22
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCC--ceeeeEEEeCC--EEEEEEeeCCeeEEEEEECCCCC
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES--VKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVG 411 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~--~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~l~~~g 411 (534)
+.+++..+++.... ++.+...++..... ...+..... ..+..+.+.++ .+++....+| .|+++++.. +
T Consensus 168 ~~~~~~~~l~~~~~----d~~v~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~vwd~~~-~ 239 (615)
T 1pgu_A 168 LKQSRPMRSMTVGD----DGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR--KISCFDGKS-G 239 (615)
T ss_dssp ECSSSSCEEEEEET----TTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC--CEEEEETTT-C
T ss_pred ECCCCCcEEEEEeC----CCcEEEEeCCCcce-eeeecccCCCCceEEEEEECCCCCCEEEEEeCCC--eEEEEECCC-C
Confidence 55666644443332 24566666643221 112332222 14778888654 4555555566 477778875 5
Q ss_pred C
Q 009441 412 E 412 (534)
Q Consensus 412 ~ 412 (534)
+
T Consensus 240 ~ 240 (615)
T 1pgu_A 240 E 240 (615)
T ss_dssp C
T ss_pred C
Confidence 5
No 82
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.85 E-value=0.0017 Score=63.76 Aligned_cols=151 Identities=9% Similarity=0.056 Sum_probs=83.8
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC--ccceeEEccCCeEEEEEECCCCCCceEEEeecCCCC
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~ 272 (534)
+.+++++++++-... + .+|+++|+++|+.+.. .... ....++|+|||..+|+... ....|+.+++.++.
T Consensus 5 ~~~~~~~~~~v~~~~-~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 5 PALKAGHEYMIVTNY-P----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCTTCEEEEEEET-T----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTE
T ss_pred ccccCCCEEEEEeCC-C----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCc
Confidence 356777776655433 2 3799999999987642 2333 2346899999954444432 23478888886652
Q ss_pred CCceEeeeecC-C---ce-EEEEEEcCCCcEEEEEecC---------cceeEEEEEeCCCCC--ceeEeeeccccee-EE
Q 009441 273 SNDICLYHEKD-D---IY-SLGLQASESKKFLFIASES---------KITRFVFYLDVSKPE--ELRVLTPRVVGVD-TA 335 (534)
Q Consensus 273 ~~d~lv~~e~d-~---~~-~v~~~~S~Dg~~l~i~~~~---------~~~~ev~~~d~~~~~--~~~~l~~~~~g~~-~~ 335 (534)
....+.... + .. ...+.++|||++|++.... .....|++++++++. ......+....+. ..
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 154 (349)
T 1jmx_B 77 --NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMR 154 (349)
T ss_dssp --EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEE
T ss_pred --EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCccccee
Confidence 111122111 1 11 1246789999999886633 113579999987643 1111122111222 23
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCC
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDN 364 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~ 364 (534)
++++|. +|+ ... .|..+++.+
T Consensus 155 ~s~dg~-l~~-~~~------~i~~~d~~~ 175 (349)
T 1jmx_B 155 AADDGS-LYV-AGP------DIYKMDVKT 175 (349)
T ss_dssp ECTTSC-EEE-ESS------SEEEECTTT
T ss_pred ECCCCc-EEE-ccC------cEEEEeCCC
Confidence 667776 666 321 166666654
No 83
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.85 E-value=0.023 Score=54.86 Aligned_cols=195 Identities=11% Similarity=0.102 Sum_probs=108.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.|||||++|+.+... ..|+++|+.+++.+.. +. .....+.|+|++.++++...+ ..|..+++
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d----~~i~iwd~ 136 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFD----ESVRIWDV 136 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE-EECCSSCEEEEEECSSSSEEEEEETT----SCEEEEET
T ss_pred ceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEE-EcCCCCCEEEEEEcCCCCEEEEEeCC----CcEEEEEC
Confidence 47788999999999986542 3799999999986542 22 223458899999665665432 35777787
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc-ee-EEEeeeCCEEEEE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VD-TAASHRGNHFFIT 346 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g-~~-~~v~~~g~~lyi~ 346 (534)
.+.. ....+... ......+.+++|+++++..+.+ ..|.+.++..+.....+...... +. ..+++++..|+..
T Consensus 137 ~~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 137 KTGK--CLKTLPAH-SDPVSAVHFNRDGSLIVSSSYD---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp TTCC--EEEEECCC-SSCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred CCCE--EEEEecCC-CCcEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 6542 12223221 2223457889999988765433 35677787765422222222111 12 2356667766554
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCce-e-eeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVK-L-QDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~-l-~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+.. +.|...++........+..+..... + ..+...++.+++....+| .|+++++..
T Consensus 211 ~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~vwd~~~ 268 (312)
T 4ery_A 211 TLD-----NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN--LVYIWNLQT 268 (312)
T ss_dssp ETT-----TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS--CEEEEETTT
T ss_pred cCC-----CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC--EEEEEECCC
Confidence 432 4566667654321111222221111 1 122222355666666666 466778874
No 84
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.85 E-value=0.011 Score=57.23 Aligned_cols=229 Identities=10% Similarity=-0.018 Sum_probs=126.1
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~ 273 (534)
-++.|+|+++.|.++-..++ .|+.+|.++++......++....++|++||.++... + ..|++++..++.
T Consensus 16 Egp~w~~~~~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~-~-----~~l~~~d~~~g~- 84 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAK----KVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI-G-----TKFCALNWKEQS- 84 (297)
T ss_dssp EEEEEETTTTEEEEEETTTT----EEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE-T-----TEEEEEETTTTE-
T ss_pred cCCeEECCCCEEEEEECCCC----EEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE-C-----CeEEEEECCCCc-
Confidence 35789998888877644333 689999998876432334444568999999854443 2 378888876542
Q ss_pred CceEeeee-cC-Cc-eEEEEEEcCCCcEEEEEecC--------cceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCC
Q 009441 274 NDICLYHE-KD-DI-YSLGLQASESKKFLFIASES--------KITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGN 341 (534)
Q Consensus 274 ~d~lv~~e-~d-~~-~~v~~~~S~Dg~~l~i~~~~--------~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~ 341 (534)
-+.+... .+ +. ..-++.+++||+..+-.... .....||.++.++ . ...+....... ...++++++
T Consensus 85 -~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~-~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 85 -AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-H-VKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp -EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-C-EEEEEEEESBEEEEEECTTSC
T ss_pred -EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-C-EEEEeeccccccceEEcCCCC
Confidence 1222221 11 21 23357889999955433322 1345789988753 2 33333221111 123667788
Q ss_pred EEEEEEcCCCCCccEEEEEeCC--CCCCc--eEEecC-CCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCccc
Q 009441 342 HFFITRRSDELFNSELLACPVD--NTSET--TVLIPH-RESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLK 415 (534)
Q Consensus 342 ~lyi~tn~~~~~~~~L~~~~~~--~~~~~--~~li~~-~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~~~ 415 (534)
.+|+.... +.+|.+++++ +.... +.+..- .......++.+.. +.|++....++ +|.+++.++ |+.+
T Consensus 162 ~lyv~~~~----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~--~v~~~d~~t-G~~~- 233 (297)
T 3g4e_A 162 IFYYIDSL----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG--RVIRLDPVT-GKRL- 233 (297)
T ss_dssp EEEEEEGG----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT--EEEEECTTT-CCEE-
T ss_pred EEEEecCC----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC--EEEEEcCCC-ceEE-
Confidence 88876542 3577777753 22211 112211 1112467777764 46777765544 588888764 6632
Q ss_pred ccCCCceeeecCc-eeeEeCCCCccCccEEEEEeccC
Q 009441 416 SLQGGKSVEFIDP-VYSIDPSESVFSSRILRFHYSSL 451 (534)
Q Consensus 416 ~~~~~~~i~lp~~-~~~i~~~~~~~~~~~l~~~~sS~ 451 (534)
..+.+|.. ...+. +. ..+.++|+++-.+.
T Consensus 234 -----~~i~~p~~~~t~~~-f~-g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 234 -----QTVKLPVDKTTSCC-FG-GKNYSEMYVTCARD 263 (297)
T ss_dssp -----EEEECSSSBEEEEE-EE-SGGGCEEEEEEBCT
T ss_pred -----EEEECCCCCceEEE-Ee-CCCCCEEEEEcCCc
Confidence 35566532 11121 11 13456788776654
No 85
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.83 E-value=0.0018 Score=64.80 Aligned_cols=199 Identities=12% Similarity=0.087 Sum_probs=110.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.|..+.|||||++||-+.. +| +|+|+|+.+++.+.. +. +....++|++++ .++.+...+ ..|..++
T Consensus 141 ~V~~v~~spdg~~l~sgs~-dg----~v~iwd~~~~~~~~~-~~~h~~~v~~v~~s~~~~~~~~s~~~d----g~v~~wd 210 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGK-DF----SVKVWDLSQKAVLKS-YNAHSSEVNCVAACPGKDTIFLSCGED----GRILLWD 210 (357)
T ss_dssp CEEEEEECSSSSEEEEEET-TS----CEEEEETTTTEEEEE-ECCCSSCEEEEEECTTCSSCEEEEETT----SCEEECC
T ss_pred CEEEEEECCCCCEEEEEeC-CC----eEEEEECCCCcEEEE-EcCCCCCEEEEEEccCCCceeeeeccC----CceEEEE
Confidence 4778899999999987644 33 599999999987652 22 223458999998 666665432 3577777
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFIT 346 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~ 346 (534)
+.++.....+.+. ........+.++|++..+++.... ...|++.++.++...+.+......+. ..++++++.+++.
T Consensus 211 ~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~g~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 211 TRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFACGDE--TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp TTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEEEES--SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEE
T ss_pred CCCCceeeeeeec-cccccccchhhhhcccceEEEeec--ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEE
Confidence 7665321111111 122234467889987655543322 23577778876542233332222222 2356676665444
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
...+ +.|...|+...... ..+.+. + .+..+.+.+ +.+++....+|. |++++++.+|+
T Consensus 288 gs~D----~~i~iwd~~~~~~~-~~~~H~-~-~V~~vafsP~d~~~l~s~s~Dg~--v~iW~~~~~~~ 346 (357)
T 4g56_B 288 ISED----CTVAVLDADFSEVF-RDLSHR-D-FVTGVAWSPLDHSKFTTVGWDHK--VLHHHLPSEGR 346 (357)
T ss_dssp EETT----SCEEEECTTSCEEE-EECCCS-S-CEEEEEECSSSTTEEEEEETTSC--EEEEECC----
T ss_pred EeCC----CEEEEEECCCCcEe-EECCCC-C-CEEEEEEeCCCCCEEEEEcCCCe--EEEEECCCCCc
Confidence 3322 34555666542211 133332 2 478888763 467777777885 55566664343
No 86
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.79 E-value=0.035 Score=54.67 Aligned_cols=196 Identities=13% Similarity=0.096 Sum_probs=104.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.|||||++||-+.. +| +|+|+|+.+++.+.. .. ......++|+|+|.++.+...+ ..+..+++.
T Consensus 57 ~v~~~~~s~d~~~l~s~s~-Dg----~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----~~v~iw~~~ 127 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQ-DG----KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD----NICSIYNLK 127 (340)
T ss_dssp CEEEEEECTTSSEEEEEET-TT----EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT----CEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeC-CC----cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC----CeEEEEECc
Confidence 4667899999999986543 33 799999999876542 11 1223458999999555554322 356667776
Q ss_pred CCCCCceEeee-ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEE
Q 009441 270 ADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (534)
Q Consensus 270 t~~~~d~lv~~-e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~t 347 (534)
+....-.+... .........+.++++++ ++..+. ...|.+.++.++.....+......+. ..+.+++..|+.-+
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC---CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 54222122211 11223333466778886 332222 23466667766531222222221122 22555555443322
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
. ++.+...++.+.... ..+..... .+..+.+.+ +.+++....+|. |.++++..
T Consensus 204 ~-----d~~v~~wd~~~~~~~-~~~~~h~~-~v~~v~~~p~~~~l~s~s~d~~--v~iwd~~~ 257 (340)
T 1got_B 204 C-----DASAKLWDVREGMCR-QTFTGHES-DINAICFFPNGNAFATGSDDAT--CRLFDLRA 257 (340)
T ss_dssp T-----TSCEEEEETTTCSEE-EEECCCSS-CEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred C-----CCcEEEEECCCCeeE-EEEcCCcC-CEEEEEEcCCCCEEEEEcCCCc--EEEEECCC
Confidence 2 234555666543211 12332222 477888765 355666666774 66678774
No 87
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.78 E-value=0.025 Score=57.53 Aligned_cols=195 Identities=13% Similarity=0.093 Sum_probs=105.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.+||||++||-+.. + .+|+|+|+.+|+... .+. +....++|+++|.++.+...+ ..|..+++
T Consensus 110 ~V~~~~~~p~~~~l~s~s~-D----g~i~vwd~~~~~~~~-~l~~h~~~V~~v~~~~~~~~l~sgs~D----~~i~iwd~ 179 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASE-D----ATIKVWDYETGDFER-TLKGHTDSVQDISFDHSGKLLASCSAD----MTIKLWDF 179 (410)
T ss_dssp CEEEEEECSSSSEEEEEES-S----SCEEEEETTTCCCCE-EECCCSSCEEEEEECTTSSEEEEEETT----SCCCEEET
T ss_pred cEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCcEEE-EEeccCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeC
Confidence 4778899999998887644 2 369999999997654 222 223458999999666665432 23445566
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~t 347 (534)
.+.. -...+.. .......+.++|+|++|+..+.+ ..|.+.++.++.....+......+. ..+.+++..|+.-+
T Consensus 180 ~~~~--~~~~~~~-h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 180 QGFE--CIRTMHG-HDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp TSSC--EEECCCC-CSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCc--eeEEEcC-CCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 5431 1112222 12234457899999987654432 3567778776542222322222222 12344555444333
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC---------------------CEEEEEEeeCCeeEEEEEE
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI---------------------DHLAVYEREGGLQKITTYR 406 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~---------------------~~lv~~~~~~g~~~l~~~~ 406 (534)
. + +.+...++...... -.+..... .+..+.+.+ +.+++....++ .|.+++
T Consensus 254 ~-D----~~v~vwd~~~~~~~-~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~--~i~iwd 324 (410)
T 1vyh_C 254 N-D----QTVRVWVVATKECK-AELREHRH-VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK--TIKMWD 324 (410)
T ss_dssp T-T----SCEEEEETTTCCEE-EEECCCSS-CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS--EEEEEE
T ss_pred C-C----CeEEEEECCCCcee-eEecCCCc-eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC--eEEEEE
Confidence 2 2 23444555432211 12222222 355555543 34566666677 467778
Q ss_pred CCCCCC
Q 009441 407 LPAVGE 412 (534)
Q Consensus 407 l~~~g~ 412 (534)
+.+ |.
T Consensus 325 ~~~-~~ 329 (410)
T 1vyh_C 325 VST-GM 329 (410)
T ss_dssp TTT-TE
T ss_pred CCC-Cc
Confidence 874 44
No 88
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.77 E-value=0.026 Score=56.23 Aligned_cols=193 Identities=13% Similarity=0.170 Sum_probs=110.2
Q ss_pred EEEEEECCCC-CEEEEEEcCCCCeEEEEEEEECCCCCeecc-c---cCCccceeEEccC-CeEEEEEECCCCCCceEEEe
Q 009441 193 VGCFQVSPDN-KLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P---LVGVTASVEWAGN-EALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 193 l~~~~~SPDG-~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~---i~~~~~~~~Ws~D-g~l~Y~~~d~~~r~~~v~~~ 266 (534)
|..+.||||| ++||.+.. +| .|+|+|+.+++.... . ..+....++|+|+ +.++++...+ ..|..+
T Consensus 76 v~~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----~~i~iw 146 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSK-GG----DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR----GATTLR 146 (383)
T ss_dssp EEEEEECSSCTTEEEEEEB-TS----CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT----TEEEEE
T ss_pred EEEEEECCCCCCEEEEEcC-CC----eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC----CEEEEE
Confidence 6677999999 88887655 33 599999998876542 1 1222346999995 4666665432 367777
Q ss_pred ecCCCCCCceEeeeecC--CceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEE
Q 009441 267 KLEADQSNDICLYHEKD--DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHF 343 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d--~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~l 343 (534)
++.+. ....+.... ......+.+++|+++|+....+ ..|++.++... ....+......+. ..+.+++..+
T Consensus 147 d~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~-~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 147 DFSGS---VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLDGH-EIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp ETTSC---EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETTSC-EEEEEECSSSCEEEEEECSSCTTE
T ss_pred ECCCC---ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECCCC-EEEEeccCCCcEEEEEECCCCCCE
Confidence 87642 222332211 2334467899999988765433 46777887432 2333333222222 2356666634
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCC-ceE--EecCCCCceeeeEEEeC-C-EEEEEEeeCCeeEEEEEECCC
Q 009441 344 FITRRSDELFNSELLACPVDNTSE-TTV--LIPHRESVKLQDIQLFI-D-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~-~~~--li~~~~~~~l~~~~~~~-~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
++....+ +.|...++..... ... .+.+ ...+..+.+.+ + .+++....++ .|.++++..
T Consensus 220 l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~~~~~d~--~i~iwd~~~ 282 (383)
T 3ei3_B 220 MATSSVD----ATVKLWDLRNIKDKNSYIAEMPH--EKPVNAAYFNPTDSTKLLTTDQRN--EIRVYSSYD 282 (383)
T ss_dssp EEEEETT----SEEEEEEGGGCCSTTCEEEEEEC--SSCEEEEEECTTTSCEEEEEESSS--EEEEEETTB
T ss_pred EEEEeCC----CEEEEEeCCCCCcccceEEEecC--CCceEEEEEcCCCCCEEEEEcCCC--cEEEEECCC
Confidence 4444322 4565666643211 112 3333 23478888865 3 4555565566 577778875
No 89
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.76 E-value=0.014 Score=56.18 Aligned_cols=237 Identities=10% Similarity=0.000 Sum_probs=127.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC-CccceeEEccCCeEEEEEECCCCCCceEEEeecCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~ 271 (534)
..++.|+|||+.|.++-..+| .|+++|.+++ ....... +....+++++||.++.... ....|++++..++
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~----~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~----~~~~i~~~d~~~g 100 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQN----RTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSH----GLRRLERQREPGG 100 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT----EEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEET----TTTEEEEECSTTC
T ss_pred ccCCeEeCCCCEEEEEeCCCC----EEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEec----CCCeEEEEcCCCC
Confidence 457899999997777655444 6899999987 3221122 2334589999997765542 1247888887554
Q ss_pred CCCceEeeee-cCCc--eEEEEEEcCCCcEEEEEecCc--------------ceeEEEEEeCCCCCceeEeeecccce-e
Q 009441 272 QSNDICLYHE-KDDI--YSLGLQASESKKFLFIASESK--------------ITRFVFYLDVSKPEELRVLTPRVVGV-D 333 (534)
Q Consensus 272 ~~~d~lv~~e-~d~~--~~v~~~~S~Dg~~l~i~~~~~--------------~~~ev~~~d~~~~~~~~~l~~~~~g~-~ 333 (534)
. -+.+... .... ...++.+++||+.++..+... ....||.++.+ +. +..+....... .
T Consensus 101 ~--~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~g 176 (296)
T 3e5z_A 101 E--WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNG 176 (296)
T ss_dssp C--EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEE
T ss_pred c--EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCcc
Confidence 2 1222221 1111 112467899998654322101 13479999876 33 44443221111 1
Q ss_pred EEEeeeCCEEEEEEcCCCCCccEEEEEeCC-CCCC-ce-EEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCC
Q 009441 334 TAASHRGNHFFITRRSDELFNSELLACPVD-NTSE-TT-VLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 334 ~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~-~~~~-~~-~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
..++++|+.+ +++. .+.+|.+.+++ +... .. -++ ........++.+.. +.|++.. ++ .|.+++.+
T Consensus 177 i~~s~dg~~l--v~~~---~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~--~v~~~~~~- 245 (296)
T 3e5z_A 177 LAFLPSGNLL--VSDT---GDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GD--GVHVLTPD- 245 (296)
T ss_dssp EEECTTSCEE--EEET---TTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TT--EEEEECTT-
T ss_pred EEECCCCCEE--EEeC---CCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CC--eEEEECCC-
Confidence 2356666666 4443 23567777765 2221 11 133 22222345666654 4666666 33 57888876
Q ss_pred CCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 410 VGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 410 ~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
|+.+ ..+..|.....+. +. ..+++.|+++-. ..+|+++++++++
T Consensus 246 -g~~~------~~~~~~~~~~~~~-f~-~~d~~~L~v~t~-----~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 246 -GDEL------GRVLTPQTTSNLC-FG-GPEGRTLYMTVS-----TEFWSIETNVRGL 289 (296)
T ss_dssp -SCEE------EEEECSSCCCEEE-EE-STTSCEEEEEET-----TEEEEEECSCCBC
T ss_pred -CCEE------EEEECCCCceeEE-EE-CCCCCEEEEEcC-----CeEEEEEcccccc
Confidence 6632 2344443211121 11 234566776543 3799999887764
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.73 E-value=0.015 Score=58.65 Aligned_cols=199 Identities=11% Similarity=0.081 Sum_probs=115.0
Q ss_pred EEEEEEECC-CCCEEEEEEcCCCCeEEEEEEEECCCCCe-------eccccC---CccceeEEccCC-eEEEEEECCCCC
Q 009441 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTP-------VGKPLV---GVTASVEWAGNE-ALVYITMDEILR 259 (534)
Q Consensus 192 ~l~~~~~SP-DG~~LA~~~d~~G~E~~~l~v~dl~tg~~-------~~~~i~---~~~~~~~Ws~Dg-~l~Y~~~d~~~r 259 (534)
.|..+.||| |+++||.+.. + .+|+|+|+.+++. +. .+. .....++|+|++ .++++...+
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~-d----g~v~vw~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~~d--- 153 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSE-D----CTVMVWEIPDGGLVLPLREPVI-TLEGHTKRVGIVAWHPTAQNVLLSAGCD--- 153 (402)
T ss_dssp CEEEEEECTTCTTEEEEEET-T----SEEEEEECCTTCCSSCBCSCSE-EEECCSSCEEEEEECSSBTTEEEEEETT---
T ss_pred CEEEEEeCCCCCCEEEEEeC-C----CeEEEEEccCCCCccccCCceE-EecCCCCeEEEEEECcCCCCEEEEEcCC---
Confidence 578889999 8998887654 2 3699999998843 21 121 223459999998 677776532
Q ss_pred CceEEEeecCCCCCCceEeee-ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce---eEE
Q 009441 260 PDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---DTA 335 (534)
Q Consensus 260 ~~~v~~~~lgt~~~~d~lv~~-e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~---~~~ 335 (534)
..|+.+++.++. ....+. .........+.+++||++|+....+ ..|++.|+..+.....+.....+. ...
T Consensus 154 -g~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 154 -NVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCRD---KRVRVIEPRKGTVVAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp -SCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEETT---SEEEEEETTTTEEEEEEECSSCSSSCCEEE
T ss_pred -CEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEecC---CcEEEEeCCCCceeeeeccCCCCCcceEEE
Confidence 357777887652 222331 1123344568899999988765533 467888887754222221222221 223
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCC
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+.++ +.+++.... ...++.|...++.+...............+..+.+.. +.|++....+| .|+++++..
T Consensus 228 ~~~~-~~~l~~g~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg--~i~i~d~~~ 299 (402)
T 2aq5_A 228 FVSE-GKILTTGFS-RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS--SIRYFEITS 299 (402)
T ss_dssp ECST-TEEEEEEEC-TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS--CEEEEEECS
T ss_pred EcCC-CcEEEEecc-CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC--eEEEEEecC
Confidence 5554 444444321 2345778888876543211122212222366677764 46666666666 466677764
No 91
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.0039 Score=62.81 Aligned_cols=203 Identities=10% Similarity=0.110 Sum_probs=109.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC---C-CeeccccC---CccceeEEccC-CeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET---G-TPVGKPLV---GVTASVEWAGN-EALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t---g-~~~~~~i~---~~~~~~~Ws~D-g~l~Y~~~d~~~r~~~v 263 (534)
.+..+.|||||++||.+... | .|+|+|+.+ + +.+. .+. +....++|+|+ +.++++...+ ..|
T Consensus 69 ~v~~~~~s~~~~~l~~~~~d-g----~v~vw~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g~v 138 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDN-G----SLELYSTNEANNAINSMA-RFSNHSSSVKTVKFNAKQDNVLASGGNN----GEI 138 (416)
T ss_dssp CEEEEEECSSSSCEEEEESS-S----CEEEECCSSTTSCCCEEE-ECCCSSSCCCEEEECSSSTTBEEEECSS----SCE
T ss_pred ceEEEEECCCCCeEEEEccC-C----eEEEeecccccccccchh-hccCCccceEEEEEcCCCCCEEEEEcCC----CeE
Confidence 47788999999999987552 3 599999987 2 2322 222 22345999999 4666665322 357
Q ss_pred EEeecCCCCCC----ceEeee--ecCCceEEEEEEcCC-CcEEEEEecCcceeEEEEEeCCCCCceeEeeec------cc
Q 009441 264 WLHKLEADQSN----DICLYH--EKDDIYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPEELRVLTPR------VV 330 (534)
Q Consensus 264 ~~~~lgt~~~~----d~lv~~--e~d~~~~v~~~~S~D-g~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~------~~ 330 (534)
+.+++.+.... ...... .........+.++++ +++++. ... ...|.+.++..+.....+... ..
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS-AGS--SNFASIWDLKAKKEVIHLSYTSPNSGIKQ 215 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEE-ESS--SSCEEEEETTTTEEEEEECCCCCSSCCCC
T ss_pred EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEE-EcC--CCCEEEEECCCCCcceEEeccccccccCC
Confidence 77787655310 111110 111122335788999 455443 332 235777888765411222111 11
Q ss_pred cee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEec-CCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEE
Q 009441 331 GVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQLFI--DHLAVYEREGGLQKITTYR 406 (534)
Q Consensus 331 g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~-~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~ 406 (534)
.+. ..+.+++..+++....+ .....|...++.........+. .. ...+..+.+.+ +.+++....+|. |.+++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d-~~~~~i~~~d~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~dg~--v~~wd 291 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGS-DNDPSILIWDLRNANTPLQTLNQGH-QKGILSLDWCHQDEHLLLSSGRDNT--VLLWN 291 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECC-SSSCCCCEEETTSTTSCSBCCCSCC-SSCEEEEEECSSCSSCEEEEESSSE--EEEEC
T ss_pred ceEEEEECCCCCCEEEEEECC-CCCceEEEEeCCCCCCCcEEeecCc-cCceeEEEeCCCCCCeEEEEeCCCC--EEEee
Confidence 111 23566665555555432 2223566666654321111232 22 23478888864 456667776774 67778
Q ss_pred CCCCCC
Q 009441 407 LPAVGE 412 (534)
Q Consensus 407 l~~~g~ 412 (534)
+.. ++
T Consensus 292 ~~~-~~ 296 (416)
T 2pm9_A 292 PES-AE 296 (416)
T ss_dssp SSS-CC
T ss_pred CCC-Cc
Confidence 774 44
No 92
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.72 E-value=0.019 Score=61.86 Aligned_cols=195 Identities=11% Similarity=0.027 Sum_probs=105.4
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeecCCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~ 271 (534)
.+.+||||++||++.+ + .++++|+.+++... .+. +....++|+|||.++-+...+ ..|..+++.+.
T Consensus 23 ~~~~spdg~~l~~~~~---~---~v~l~~~~~~~~~~-~~~~h~~~v~~~~~spdg~~lasg~~d----~~v~lWd~~~~ 91 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNG---T---SVYTVPVGSLTDTE-IYTEHSHQTTVAKTSPSGYYCASGDVH----GNVRIWDTTQT 91 (611)
T ss_dssp CCEECTTSSEEEEEET---T---EEEEEETTCSSCCE-EECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEESSST
T ss_pred EEeeCCCCCEEEeCCC---C---EEEEecCCCcccCe-EecCCCCceEEEEECCCCcEEEEEeCC----CCEEEeECCCC
Confidence 3578999999999853 2 78999998876543 222 223458999999555555322 35677777543
Q ss_pred CCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcc-eeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcC
Q 009441 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (534)
Q Consensus 272 ~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~-~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~ 349 (534)
...-...+.. .......++++|||++|+....... ...+++.+.... ...+......+. ..+.+++...++....
T Consensus 92 ~~~~~~~~~~-~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~--~~~l~gh~~~v~~v~f~p~~~~~l~s~s~ 168 (611)
T 1nr0_A 92 THILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS--NGNLTGQARAMNSVDFKPSRPFRIISGSD 168 (611)
T ss_dssp TCCEEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB--CBCCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred cceeeEeecc-cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC--cceecCCCCCceEEEECCCCCeEEEEEeC
Confidence 2111112222 1223446889999999876654332 246677664321 222222222222 2255665543333332
Q ss_pred CCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
+ ..+...+...... .-.+....+ .+..+.+.++ .+++....++. |+++++.+ |+
T Consensus 169 D----~~v~lwd~~~~~~-~~~l~~H~~-~V~~v~fspdg~~las~s~D~~--i~lwd~~~-g~ 223 (611)
T 1nr0_A 169 D----NTVAIFEGPPFKF-KSTFGEHTK-FVHSVRYNPDGSLFASTGGDGT--IVLYNGVD-GT 223 (611)
T ss_dssp T----SCEEEEETTTBEE-EEEECCCSS-CEEEEEECTTSSEEEEEETTSC--EEEEETTT-CC
T ss_pred C----CeEEEEECCCCeE-eeeeccccC-ceEEEEECCCCCEEEEEECCCc--EEEEECCC-Cc
Confidence 2 2344444432111 113333333 4778887754 56677777774 56667664 44
No 93
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.70 E-value=0.0093 Score=60.24 Aligned_cols=192 Identities=16% Similarity=0.126 Sum_probs=103.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC---------------------ccceeEEccCCeEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---------------------VTASVEWAGNEALV 250 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~---------------------~~~~~~Ws~Dg~l~ 250 (534)
.|..++|||||++||.+.+ ..+.|+++.+|+.+.. +.+ ....++|+|||.++
T Consensus 66 ~V~~v~fspdg~~la~g~~------~~v~i~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCN------KTTQVYRVSDGSLVAR-LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp CCCEEEECTTSSEEEEECB------SCEEEEETTTCCEEEE-ECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred EEEEEEECCCCCEEEEEcC------CcEEEEEecCCCEEEE-ecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 3567799999999998643 2578999999876431 100 12358999999555
Q ss_pred EEEECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc
Q 009441 251 YITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV 330 (534)
Q Consensus 251 Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~ 330 (534)
.+...+ ..|..+++.+.. -...+... ......+.+++|+++|+..+.+ ..+.+.|+.++. .........
T Consensus 139 ~s~~~d----~~i~iwd~~~~~--~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~~~~-~~~~~~~~~ 207 (393)
T 1erj_A 139 ATGAED----RLIRIWDIENRK--IVMILQGH-EQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLRTGQ-CSLTLSIED 207 (393)
T ss_dssp EEEETT----SCEEEEETTTTE--EEEEECCC-SSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTE-EEEEEECSS
T ss_pred EEEcCC----CeEEEEECCCCc--EEEEEccC-CCCEEEEEEcCCCCEEEEecCC---CcEEEEECCCCe-eEEEEEcCC
Confidence 555332 357777776542 22233322 2234467899999988654432 346666877654 222222222
Q ss_pred cee-EEEee-eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEec-----CCCCceeeeEEEeCC-EEEEEEeeCCeeEE
Q 009441 331 GVD-TAASH-RGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-----HRESVKLQDIQLFID-HLAVYEREGGLQKI 402 (534)
Q Consensus 331 g~~-~~v~~-~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~-----~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l 402 (534)
++. ..+.+ ++..|+. ...+ +.+...++........+-. ......+..+.+.++ .+++....+|. |
T Consensus 208 ~v~~~~~~~~~~~~l~~-~s~d----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~--v 280 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAA-GSLD----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS--V 280 (393)
T ss_dssp CEEEEEECSTTCCEEEE-EETT----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE--E
T ss_pred CcEEEEEECCCCCEEEE-EcCC----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE--E
Confidence 322 22445 3444433 3322 3344455543221111100 111224777887653 45666767774 5
Q ss_pred EEEECC
Q 009441 403 TTYRLP 408 (534)
Q Consensus 403 ~~~~l~ 408 (534)
.++++.
T Consensus 281 ~~wd~~ 286 (393)
T 1erj_A 281 KLWNLQ 286 (393)
T ss_dssp EEEEC-
T ss_pred EEEECC
Confidence 566765
No 94
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.70 E-value=0.011 Score=59.77 Aligned_cols=150 Identities=11% Similarity=-0.044 Sum_probs=86.2
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~ 273 (534)
.+.+||||++||.+... | .++++|+.+++.... ..........|++|+.++.+...+ ..|..+++.+..
T Consensus 61 ~~~~s~~g~~l~~~~~d-~----~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~- 130 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLD-G----HDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTE----GDIKVLDSNFNL- 130 (420)
T ss_dssp TCEEEEEETTEEEEEET-T----EEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETT----SCEEEECTTSCE-
T ss_pred ceeeeecCCeEEEEEcC-C----cEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECC----CCEEEEeCCCcc-
Confidence 46899999999987653 3 799999988765432 111233445788999444444322 356677766442
Q ss_pred CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCC
Q 009441 274 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDEL 352 (534)
Q Consensus 274 ~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~ 352 (534)
...++.. .......+.+++|+++|+..+.+ ..|++.++.++.....+......+. ..+.+++..|+..+..
T Consensus 131 -~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--- 202 (420)
T 3vl1_A 131 -QREIDQA-HVSEITKLKFFPSGEALISSSQD---MQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD--- 202 (420)
T ss_dssp -EEEETTS-SSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT---
T ss_pred -eeeeccc-ccCccEEEEECCCCCEEEEEeCC---CeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC---
Confidence 1222222 22334468899999988754432 3577888876542333433322222 2356677766654432
Q ss_pred CccEEEEEeCCC
Q 009441 353 FNSELLACPVDN 364 (534)
Q Consensus 353 ~~~~L~~~~~~~ 364 (534)
+.|...++.+
T Consensus 203 --~~v~iwd~~~ 212 (420)
T 3vl1_A 203 --GTIRLWECGT 212 (420)
T ss_dssp --SCEEEEETTT
T ss_pred --CcEEEeECCC
Confidence 3455556543
No 95
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.70 E-value=0.0013 Score=66.07 Aligned_cols=146 Identities=10% Similarity=0.092 Sum_probs=81.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc-cC--C-ccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LV--G-VTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~-i~--~-~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
|..+.|||||++||.+.+. .+.+++..+|+.+... .. . ....++|+|||.++.+...+......++.+++
T Consensus 179 V~~v~fspdg~~l~s~s~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 179 VKDLHFSTDGKVVAYITGS------SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp CCEEEECTTSSEEEEECSS------CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred eEEEEEccCCceEEeccce------eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 6778999999999987531 3677788888765321 11 1 24568999999444443322223345666665
Q ss_pred CCCCCCceEeee-ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec-cccee-EEEeeeCCEEEE
Q 009441 269 EADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 269 gt~~~~d~lv~~-e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~-~~g~~-~~v~~~g~~lyi 345 (534)
............ .........+++||||++|+..+.+ ..|.+.|+.+++.++.+... ...+. ..++++|..|+-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D---~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 253 KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND---NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT---SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC---CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 543211111111 1122233457899999998765543 34778888775412222221 22222 236787776654
Q ss_pred EE
Q 009441 346 TR 347 (534)
Q Consensus 346 ~t 347 (534)
.+
T Consensus 330 ~S 331 (365)
T 4h5i_A 330 VS 331 (365)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.70 E-value=0.0025 Score=64.51 Aligned_cols=184 Identities=15% Similarity=0.148 Sum_probs=101.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc----cCCccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP----LVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~----i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.+..+.|+|||+.++++.+.+| .|+|+|+.+++.+... ..+....++|+|||.++++... ...|+.++
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd 204 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDN----VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVRVIE 204 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTS----CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEEEEE
T ss_pred eEEEEEECcCCCCEEEEEcCCC----EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEEEEe
Confidence 4778899999954444444444 5999999999765421 1222356999999954455432 23688888
Q ss_pred cCCCCCCceEee-eecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCc-eeEee-eccccee-EEEeeeCCEE
Q 009441 268 LEADQSNDICLY-HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVLT-PRVVGVD-TAASHRGNHF 343 (534)
Q Consensus 268 lgt~~~~d~lv~-~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~-~~~l~-~~~~g~~-~~v~~~g~~l 343 (534)
+.++. ....+ ..........+.+++||++++..........|.+.++..... ..... ....++. ..+++++..|
T Consensus 205 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 205 PRKGT--VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp TTTTE--EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEE
T ss_pred CCCCc--eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEE
Confidence 76642 12223 111111133567899999877654334456788889877541 22221 2222222 3366777777
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCC-ceEEecCCCCceeeeEEEeCCE
Q 009441 344 FITRRSDELFNSELLACPVDNTSE-TTVLIPHRESVKLQDIQLFIDH 389 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~-~~~li~~~~~~~l~~~~~~~~~ 389 (534)
++....+ +.|...++.+... ...+-.......+..+.+.++.
T Consensus 283 ~~~g~~d----g~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 283 YLCGKGD----SSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKR 325 (402)
T ss_dssp EEEETTC----SCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGG
T ss_pred EEEEcCC----CeEEEEEecCCCcceEeecccccCCcccceEEeccc
Confidence 7666432 3444455543321 1112111112246667766543
No 97
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.67 E-value=0.014 Score=58.89 Aligned_cols=205 Identities=15% Similarity=0.057 Sum_probs=106.1
Q ss_pred EEEECCCCCEEEEEEcC-----CCCeEEEEEEEECCCCCeecc-ccC-------C-ccceeEEccCCeEEEEEECCCCCC
Q 009441 195 CFQVSPDNKLVAYAEDT-----KGDEIYTVYVIDIETGTPVGK-PLV-------G-VTASVEWAGNEALVYITMDEILRP 260 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~-----~G~E~~~l~v~dl~tg~~~~~-~i~-------~-~~~~~~Ws~Dg~l~Y~~~d~~~r~ 260 (534)
.+.+||||++|.++-.. .|...-.+.++|+++++.+.. .+. + .-.+++|+|||+.+|+.+.. ..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~--~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA--AG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC--CC
Confidence 67999999999988642 232335788999999877642 222 1 12358999999555555321 12
Q ss_pred ceEEEeecCCCCCCce-E-------eeeecCCceEEEEEEcCCCcEEEEEecCc--------------------------
Q 009441 261 DKAWLHKLEADQSNDI-C-------LYHEKDDIYSLGLQASESKKFLFIASESK-------------------------- 306 (534)
Q Consensus 261 ~~v~~~~lgt~~~~d~-l-------v~~e~d~~~~v~~~~S~Dg~~l~i~~~~~-------------------------- 306 (534)
..|...+ .+...... + ++.. .+..+ +..++||+.+++.. ..
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~~~~~~~~~-~~~~~--~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSPTCYHIHPG-APSTF--YLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCCceEEEEeC-CCceE--EEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 3566666 54321111 0 0100 11111 23445655544433 10
Q ss_pred ---------ceeEEEEEeCCCCCceeEeee-------------ccccee-EEEeeeCCEEEEEEcCCC-----CCccEEE
Q 009441 307 ---------ITRFVFYLDVSKPEELRVLTP-------------RVVGVD-TAASHRGNHFFITRRSDE-----LFNSELL 358 (534)
Q Consensus 307 ---------~~~ev~~~d~~~~~~~~~l~~-------------~~~g~~-~~v~~~g~~lyi~tn~~~-----~~~~~L~ 358 (534)
....++++|+.+.. .+.+.. +..|.. ..++++++++|+..+... .....|.
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~-~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAG-ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCc-ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 11256677765432 111110 111212 336778899998765311 1345799
Q ss_pred EEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 359 ACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 359 ~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
.+|+++.+... -++-.. ...++.+..| ++++..+. +...|.++|..+ ++
T Consensus 302 VID~~t~~vv~-~i~~g~--~p~~i~~s~Dg~~~l~v~~~-~~~~V~ViD~~t-~~ 352 (373)
T 2mad_H 302 SVTGLVGQTSS-QISLGH--DVDAISVAQDGGPDLYALSA-GTEVLHIYDAGA-GD 352 (373)
T ss_pred EEECCCCEEEE-EEECCC--CcCeEEECCCCCeEEEEEcC-CCCeEEEEECCC-CC
Confidence 99987543211 223221 2456666643 34444442 234789999885 44
No 98
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0075 Score=60.58 Aligned_cols=193 Identities=12% Similarity=0.139 Sum_probs=104.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-c-cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~-i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++||.+... | .|+++| .+++.+.. . .......++|+|++.++++...+ ..|..+++.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d-g----~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~ 179 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN-G----ELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE----NVTILWNVI 179 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-S----CEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETT----CCEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEeCC-C----eEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecC----CeEEEEECC
Confidence 57888999999999987553 3 588999 45554432 1 12223459999999444444321 246666765
Q ss_pred CCCCCceEeeeecCC--------------ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-E
Q 009441 270 ADQSNDICLYHEKDD--------------IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 334 (534)
Q Consensus 270 t~~~~d~lv~~e~d~--------------~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~ 334 (534)
++. ....+..... .....+.+++++.+++. . ....|++.++........+......+. .
T Consensus 180 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~i~~~d~~~~~~~~~~~~~~~~i~~~ 253 (425)
T 1r5m_A 180 SGT--VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIP-G---PKGAIFVYQITEKTPTGKLIGHHGPISVL 253 (425)
T ss_dssp TTE--EEEEECCC---------------CCCBSCCEEEETTEEEEE-C---GGGCEEEEETTCSSCSEEECCCSSCEEEE
T ss_pred CCc--EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEE-c---CCCeEEEEEcCCCceeeeeccCCCceEEE
Confidence 442 1112211110 00224567778764322 2 234678888876542222322222222 2
Q ss_pred EEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 335 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 335 ~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.+.+++..|+..+.. +.|...++...... ..+... ...+..+.+.++.+++....+| .|+++++..
T Consensus 254 ~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~-~~~~~~-~~~i~~~~~~~~~~l~~~~~d~--~i~i~d~~~ 319 (425)
T 1r5m_A 254 EFNDTNKLLLSASDD-----GTLRIWHGGNGNSQ-NCFYGH-SQSIVSASWVGDDKVISCSMDG--SVRLWSLKQ 319 (425)
T ss_dssp EEETTTTEEEEEETT-----SCEEEECSSSBSCS-EEECCC-SSCEEEEEEETTTEEEEEETTS--EEEEEETTT
T ss_pred EECCCCCEEEEEcCC-----CEEEEEECCCCccc-eEecCC-CccEEEEEECCCCEEEEEeCCC--cEEEEECCC
Confidence 356666655544432 34666666543221 233322 2358888888654666666666 577788874
No 99
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.66 E-value=0.0047 Score=60.69 Aligned_cols=191 Identities=13% Similarity=0.111 Sum_probs=104.6
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
+..+.|||||++||.+.. + ..++++|+.+++.... .. ......++|+|||.++.+...+ ..|..+++.+
T Consensus 125 ~~~~~~spdg~~l~~g~~-d----g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~d----g~i~iwd~~~ 195 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATGTH-V----GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID----GIINIFDIAT 195 (321)
T ss_dssp CCCEEECTTSSEEEEECT-T----SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETT----SCEEEEETTT
T ss_pred EEEEEECCCCCEEEEEcC-C----CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCC----CeEEEEECCC
Confidence 445789999999998643 2 3689999999876532 11 1223458999999544554322 3577778765
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~ 349 (534)
+. ....+.... .....+.++||+++|+..+.+ ..|.+.++........+......+. ..+++++..|+..+.
T Consensus 196 ~~--~~~~~~~h~-~~v~~l~~spd~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~- 268 (321)
T 3ow8_A 196 GK--LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD---GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS- 268 (321)
T ss_dssp TE--EEEEECCCS-SCCCEEEECTTSCEEEEECTT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-
T ss_pred Cc--EEEEEcccC-CceeEEEEcCCCCEEEEEcCC---CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeC-
Confidence 42 122232211 122247899999987654332 3467778776541222222222222 235666766554433
Q ss_pred CCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEEC
Q 009441 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRL 407 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l 407 (534)
+ +.|...++.+..... .+....+ .+..+.+.++ ..++....+|. |.+++.
T Consensus 269 D----~~v~iwd~~~~~~~~-~~~~h~~-~v~~v~~s~~g~~l~s~~~d~~--i~vwd~ 319 (321)
T 3ow8_A 269 D----KSVKVWDVGTRTCVH-TFFDHQD-QVWGVKYNGNGSKIVSVGDDQE--IHIYDC 319 (321)
T ss_dssp T----SCEEEEETTTTEEEE-EECCCSS-CEEEEEECTTSSEEEEEETTCC--EEEEEC
T ss_pred C----CcEEEEeCCCCEEEE-EEcCCCC-cEEEEEECCCCCEEEEEeCCCe--EEEEeC
Confidence 2 345556665432111 2222222 4777777653 45566666664 444443
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.66 E-value=0.014 Score=64.62 Aligned_cols=195 Identities=11% Similarity=0.068 Sum_probs=110.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc--ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~--~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++||.+.+ + ..|+|+|+.+|+.+.. ...+....++|+|||.++.+...+ ..|..+++.
T Consensus 57 ~v~~~~~s~~~~~l~~~~~-d----g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~vw~~~ 127 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD-D----FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD----LTVKLWNWE 127 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET-T----SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT----SEEEEEEGG
T ss_pred cEEEEEEeCCCCEEEEEeC-C----CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC----CEEEEEECC
Confidence 4778899999999999765 2 3799999999987642 112233459999999444444322 357777776
Q ss_pred CCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-ccee-EEEee--eCCEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVD-TAASH--RGNHFF 344 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~~-~~v~~--~g~~ly 344 (534)
++. .-...+.. .......+.++| |++.++....+ ..|++.++.++.....+.... .++. ..+.+ ++..++
T Consensus 128 ~~~-~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 128 NNW-ALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLD---RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp GTS-EEEEEEEC-CSSCEEEEEEETTEEEEEEEEETT---SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred CCc-eEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 542 11223322 223445678899 77777664433 357777876654122222221 2222 22444 444443
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
. ... ++.|...++.+... ...+..... .+..+.+.++ .+++....+| .|+++++.+
T Consensus 203 ~-~~~----dg~i~~~d~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg--~v~vwd~~~ 259 (814)
T 3mkq_A 203 T-ASD----DLTIKIWDYQTKSC-VATLEGHMS-NVSFAVFHPTLPIIISGSEDG--TLKIWNSST 259 (814)
T ss_dssp E-ECT----TSEEEEEETTTTEE-EEEEECCSS-CEEEEEECSSSSEEEEEETTS--CEEEEETTT
T ss_pred E-EeC----CCEEEEEECCCCcE-EEEEcCCCC-CEEEEEEcCCCCEEEEEeCCC--eEEEEECCC
Confidence 3 322 24676777654321 113332222 4777777654 4556666666 366678774
No 101
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.027 Score=56.43 Aligned_cols=192 Identities=8% Similarity=0.151 Sum_probs=99.5
Q ss_pred EEEEEEECCCCC-EEEEEEcCCCCeEEEEEEEEC----CCCCe------ecc---cc---------CCccceeEEccCCe
Q 009441 192 SVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDI----ETGTP------VGK---PL---------VGVTASVEWAGNEA 248 (534)
Q Consensus 192 ~l~~~~~SPDG~-~LA~~~d~~G~E~~~l~v~dl----~tg~~------~~~---~i---------~~~~~~~~Ws~Dg~ 248 (534)
.|..+.|||||+ +||.+.. + ..++|+|+ .+|+. ... .. .+....++|+|||.
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEK-N----SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp CCSEEEECSSCTTEEEEEET-B----TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred ceEEEEECCCCCcEEEEecC-C----ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 366789999999 9987644 2 37999999 88872 211 11 11234589999995
Q ss_pred EEEEEECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec
Q 009441 249 LVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR 328 (534)
Q Consensus 249 l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~ 328 (534)
++++...+ ..|+.++.. + .....+.. .......+.+++|+++|+....+ ..+.+.++.++.....+...
T Consensus 122 ~l~~~~~d----g~i~i~~~~-~--~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 122 SIVTGVEN----GELRLWNKT-G--ALLNVLNF-HRAPIVSVKWNKDGTHIISMDVE---NVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp EEEEEETT----SCEEEEETT-S--CEEEEECC-CCSCEEEEEECTTSSEEEEEETT---CCEEEEETTTTEEEEEECCC
T ss_pred EEEEEeCC----CeEEEEeCC-C--CeeeeccC-CCccEEEEEECCCCCEEEEEecC---CeEEEEECCCCcEEEEeecc
Confidence 55554332 245555622 2 12222322 22334467899999998765432 34667777654311111111
Q ss_pred ccc---------------ee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEE
Q 009441 329 VVG---------------VD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLA 391 (534)
Q Consensus 329 ~~g---------------~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv 391 (534)
... +. ..+.+ ++.+++.+ .++.|...++...... ..+.... ..+..+.+.++ .++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~g~i~~~d~~~~~~~-~~~~~~~-~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPG-----PKGAIFVYQITEKTPT-GKLIGHH-GPISVLEFNDTNKLL 262 (425)
T ss_dssp ---------------CCCBSCCEEEE-TTEEEEEC-----GGGCEEEEETTCSSCS-EEECCCS-SCEEEEEEETTTTEE
T ss_pred ccCccceeeccccCCcceeeEEEEcC-CCEEEEEc-----CCCeEEEEEcCCCcee-eeeccCC-CceEEEEECCCCCEE
Confidence 110 11 11333 34444332 2356777777653321 1232222 24778888753 355
Q ss_pred EEEeeCCeeEEEEEECCC
Q 009441 392 VYEREGGLQKITTYRLPA 409 (534)
Q Consensus 392 ~~~~~~g~~~l~~~~l~~ 409 (534)
+....+| .|+++++..
T Consensus 263 ~~~~~d~--~i~i~d~~~ 278 (425)
T 1r5m_A 263 LSASDDG--TLRIWHGGN 278 (425)
T ss_dssp EEEETTS--CEEEECSSS
T ss_pred EEEcCCC--EEEEEECCC
Confidence 5555566 467777764
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.024 Score=58.25 Aligned_cols=196 Identities=13% Similarity=0.156 Sum_probs=108.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec-c--cc---CCccceeEEccC---CeEEEEEECCCCCCce
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-K--PL---VGVTASVEWAGN---EALVYITMDEILRPDK 262 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~-~--~i---~~~~~~~~Ws~D---g~l~Y~~~d~~~r~~~ 262 (534)
.+..+.|||||++|+.+.. .| .++++++.+++... . .+ .+....++|+|| +.++++...+ ..
T Consensus 151 ~v~~~~~sp~~~~l~~~~~-~g----~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d----~~ 221 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADK-FG----DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD----EH 221 (450)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT----SC
T ss_pred CceEEEEcCCCCEEEEEeC-CC----cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC----Cc
Confidence 3667899999999998744 33 58999998886542 0 11 122345899999 7555555432 35
Q ss_pred EEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec--------------
Q 009441 263 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-------------- 328 (534)
Q Consensus 263 v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~-------------- 328 (534)
|+.+++.++. ....+..........+.++ ||++|+..+. ...|.+.++.++.....+...
T Consensus 222 i~vwd~~~~~--~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 222 IKISHYPQCF--IVDKWLFGHKHFVSSICCG-KDYLLLSAGG---DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp EEEEEESCTT--CEEEECCCCSSCEEEEEEC-STTEEEEEES---SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred EEEEECCCCc--eeeeeecCCCCceEEEEEC-CCCEEEEEeC---CCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 7777776552 2222221223344467888 9999876543 346778888775412222100
Q ss_pred -----------cccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeC--CCCCCceE--EecCCCCceeeeEEEeCCEEEE
Q 009441 329 -----------VVGVD-TAASHRGNHFFITRRSDELFNSELLACPV--DNTSETTV--LIPHRESVKLQDIQLFIDHLAV 392 (534)
Q Consensus 329 -----------~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~--~~~~~~~~--li~~~~~~~l~~~~~~~~~lv~ 392 (534)
...+. ..+.+++..+++.+..+ ..|...++ ........ .+... ..+..+.+.++.+++
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d----~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~~~~~v 369 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT----KCIIILEMSEKQKGDLALKQIITFP--YNVISLSAHNDEFQV 369 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTC----SEEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEETTEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCC----CeEEEEEeccCCCCceeeccEeccC--CceEEEEecCCcEEE
Confidence 00111 12445566666665332 34444444 22111111 23332 248889998888777
Q ss_pred EEeeCCe-------eEEEEEECC
Q 009441 393 YEREGGL-------QKITTYRLP 408 (534)
Q Consensus 393 ~~~~~g~-------~~l~~~~l~ 408 (534)
....... -+++.++..
T Consensus 370 ~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 370 TLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EECCTTCCSSCCCSEEEEEEETT
T ss_pred EEecccCCCCCCcceEEEEEEcC
Confidence 6644321 155655554
No 103
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.63 E-value=0.023 Score=56.72 Aligned_cols=198 Identities=12% Similarity=0.081 Sum_probs=111.9
Q ss_pred EEEEEEEEC----CCCCE-EEEEEcCCCCeEEEEEEEECCC------CCeec-----cc---------cCCccceeEEcc
Q 009441 191 YSVGCFQVS----PDNKL-VAYAEDTKGDEIYTVYVIDIET------GTPVG-----KP---------LVGVTASVEWAG 245 (534)
Q Consensus 191 ~~l~~~~~S----PDG~~-LA~~~d~~G~E~~~l~v~dl~t------g~~~~-----~~---------i~~~~~~~~Ws~ 245 (534)
..+..+.|+ |||++ |+.+.. +| .|+++|+.+ ++.+. .. -......++|+|
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 196 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDV-KG----TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE 196 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEET-TS----CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT
T ss_pred CcEEEEEEeeccCCCCceEEEEEeC-CC----cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC
Confidence 357788999 99999 776544 34 589999987 55432 11 122234599999
Q ss_pred CCeEEEEEECCCCCCceEEEeecCCCCCCceEeeee---c--CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 246 NEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE---K--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 246 Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e---~--d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
++ ++++... ...|+.+++.+.. ....+.. . +......+.+++|+++|+....+.....|++.++.++.
T Consensus 197 ~~-~l~~~~~----dg~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 197 RG-LIATGFN----NGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp TS-EEEEECT----TSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred Cc-eEEEEeC----CCcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc
Confidence 99 6666532 2368888876542 2223332 1 02334467899999998765543223678888987754
Q ss_pred ceeEeee-------------ccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEec------CC-----
Q 009441 321 ELRVLTP-------------RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP------HR----- 375 (534)
Q Consensus 321 ~~~~l~~-------------~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~------~~----- 375 (534)
....+.. ....+. ..+++++..|+..+. ++.|...++...... ..+. ..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-----DGKLRFWDVKTKERI-TTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTTEEE-EEEECCGGGCSSGGGCC
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-----CCeEEEEEcCCCcee-EEEecccCcccchhhhh
Confidence 2222222 222222 235666776654443 246777777543211 1233 11
Q ss_pred ---------CCceeeeEEEeCC-----------EEEEEEeeCCeeEEEEEECC
Q 009441 376 ---------ESVKLQDIQLFID-----------HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 376 ---------~~~~l~~~~~~~~-----------~lv~~~~~~g~~~l~~~~l~ 408 (534)
....+..+.+.++ .+++....+|. |.+++++
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~--i~iw~~~ 394 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS--IRWFREA 394 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE--EEEEEEE
T ss_pred ccccccccccCCceeEEEeccccccccccccccceEEEecCCCc--EEEEEcC
Confidence 0235888888876 57778877885 4455554
No 104
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.62 E-value=0.018 Score=59.06 Aligned_cols=117 Identities=16% Similarity=0.037 Sum_probs=69.3
Q ss_pred ECCCCCEEEEEEcCCCCe-EEEEEEEECCCCCeeccccC-CccceeEEccCCeEEEEEECCC------CCCceEEEeecC
Q 009441 198 VSPDNKLVAYAEDTKGDE-IYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMDEI------LRPDKAWLHKLE 269 (534)
Q Consensus 198 ~SPDG~~LA~~~d~~G~E-~~~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg~l~Y~~~d~~------~r~~~v~~~~lg 269 (534)
+.||+++ +|..+.+... ..++.++|+++++.+.. |+ +...+++++|||+.+|+..... .+...|...+..
T Consensus 80 p~~~~~~-vyV~n~~~~~~~~~VsVID~~t~~vv~~-I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 80 PAPDARR-VYIQDPAHFAAITQQFVIDGSTGRILGM-TDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCCCTTE-EEEEECTTTCSSEEEEEEETTTTEEEEE-EEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCCCE-EEEECCCcCCCCCeEEEEECCCCEEEEE-EECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 4578887 4555543211 16899999999988763 32 2222799999995555553100 012357777766
Q ss_pred CCCCCceEeee-------ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 270 ADQSNDICLYH-------EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 270 t~~~~d~lv~~-------e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
+......+... ...|. .+.+|+||+++++... ...+.|.++|+.+.+
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~---~~~~spDGk~lyV~n~-~~~~~VsVID~~t~k 211 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQW---MNALTPDNKNLLFYQF-SPAPAVGVVDLEGKT 211 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGG---GSEECTTSSEEEEEEC-SSSCEEEEEETTTTE
T ss_pred CCcEEEEEECCCccccccCCCcc---eEEEcCCCCEEEEEec-CCCCeEEEEECCCCe
Confidence 55321122111 01121 3578999999988532 235678999998764
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.0071 Score=64.04 Aligned_cols=229 Identities=13% Similarity=0.016 Sum_probs=114.6
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~ 272 (534)
+.++.|||||++||=+ +. ..+++ |.+.++.+...-..++ .++++||| .+. .| ++.+.+
T Consensus 18 v~sv~~SpDG~~iASa----s~-D~TV~--d~~~~~~l~gh~~~v~-~V~FsPdg------~~~------~~--~~~~~~ 75 (588)
T 2j04_A 18 KNNLTWARDGTLYLTT----FP-DISIG--QPKYAKDINCNSKNLF-HVKEFPLE------FEN------KL--DFELAQ 75 (588)
T ss_dssp SCCEEECTTSCEEEEC----SS-SEEEE--EECCCSCCSSBGGGTE-EEEEECCC------CCC------TT--TTSCCC
T ss_pred EEEEEECCCCCEEEEE----cC-Cceee--cccccceecCCCccEE-EEEECCCC------Ccc------eE--EEEeCC
Confidence 4567899999999964 22 24555 7666655421112233 48899998 111 11 111111
Q ss_pred CCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc-----cee-EEEeeeCCEEEEE
Q 009441 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-----GVD-TAASHRGNHFFIT 346 (534)
Q Consensus 273 ~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~-----g~~-~~v~~~g~~lyi~ 346 (534)
.. .++.-....+...+++||||++|+..++++ .|.+.+.++ .+..+. ... .+. ..++++|+.|+..
T Consensus 76 ~~--~~~~~~~~~~V~~vawSPdG~~LAs~s~dg---~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 76 QN--GLLNSQPVCYPRVCKPSPIDDWMAVLSNNG---NVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp SS--CSSTTSCSCCEEEEEECSSSSCEEEEETTS---CEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE
T ss_pred Cc--eEeecCCCCcEEEEEECCCCCEEEEEeCCC---cEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEE
Confidence 11 122101134566789999999998766543 344555322 122221 111 122 3378888888776
Q ss_pred EcCCCCCccEEEEEeCCCCCC--c---eE-Eec---CCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCccccc
Q 009441 347 RRSDELFNSELLACPVDNTSE--T---TV-LIP---HRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSL 417 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~--~---~~-li~---~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~ 417 (534)
+.. +.|...++.+... . .. .+. .+....+..+++.++. ++....+.. ++++++.. .....
T Consensus 148 s~D-----GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~t--VrlWd~~~--~~~~~- 216 (588)
T 2j04_A 148 NED-----GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNS--VFSMTVSA--SSHQP- 216 (588)
T ss_dssp ETT-----SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCC--EEEECCCS--SSSCC-
T ss_pred cCC-----CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCe--EEEEECCC--Ccccc-
Confidence 652 3455555544321 0 11 221 1122358899999888 555554543 56667763 31100
Q ss_pred CCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEE
Q 009441 418 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKK 471 (534)
Q Consensus 418 ~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~ 471 (534)
..+.+. +.....+.. ..+.+..+. +. + ..++..||..+++....+
T Consensus 217 -~~~tL~-~~h~~~V~s--vaFsg~~LA-Sa-~---~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 217 -VSRMIQ-NASRRKITD--LKIVDYKVV-LT-C---PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp -CEEEEE-CCCSSCCCC--EEEETTEEE-EE-C---SSEEEEEETTTTEEEEEE
T ss_pred -ceeeec-ccccCcEEE--EEEECCEEE-EE-e---CCeEEEEECCCCeEEEEE
Confidence 001121 111011211 122223333 32 2 279999999888875444
No 106
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.0014 Score=66.19 Aligned_cols=205 Identities=11% Similarity=0.096 Sum_probs=108.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCC------CeEEEEEEEECCCCCee---cc-ccCCccceeEEccCCeEEEEEECCCCCCc
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKG------DEIYTVYVIDIETGTPV---GK-PLVGVTASVEWAGNEALVYITMDEILRPD 261 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G------~E~~~l~v~dl~tg~~~---~~-~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~ 261 (534)
.+..++|||||+.++++.+..| ++...|+|+|+.+++.. .. ........++|+||+.++.+...+ .
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g 89 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN----G 89 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS----S
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC----C
Confidence 4556789999984444444445 55678999999988632 11 112223469999999444444321 2
Q ss_pred eEEEeecCCCCC--CceEeeeecCCceEEEEEEcCC-CcEEEEEecCcceeEEEEEeCCCCC------ceeEe---eecc
Q 009441 262 KAWLHKLEADQS--NDICLYHEKDDIYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPE------ELRVL---TPRV 329 (534)
Q Consensus 262 ~v~~~~lgt~~~--~d~lv~~e~d~~~~v~~~~S~D-g~~l~i~~~~~~~~ev~~~d~~~~~------~~~~l---~~~~ 329 (534)
.|..+++.+... .....+.. .......+.+++| +++|+.... ...|++.++.... ....+ ....
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGGN---NGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEECS---SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred eEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEcC---CCeEEEEECCCCccccccccccccccccCCC
Confidence 566677765211 11222222 1222234778998 676654332 2346777776542 11111 1111
Q ss_pred ccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCC-----CceeeeEEEeCC--EEEEEEeeCC-ee
Q 009441 330 VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-----SVKLQDIQLFID--HLAVYEREGG-LQ 400 (534)
Q Consensus 330 ~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~-----~~~l~~~~~~~~--~lv~~~~~~g-~~ 400 (534)
..+. ..+.++++.+++.... ++.|...++..... ...+.... ...+..+.+.++ .+++....++ ..
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~----dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGS----SNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESS----SSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred CCeeEEEeCCCCCcEEEEEcC----CCCEEEEECCCCCc-ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 1111 2355664555555443 24566677754321 11222221 335888888764 4666666554 23
Q ss_pred EEEEEECCC
Q 009441 401 KITTYRLPA 409 (534)
Q Consensus 401 ~l~~~~l~~ 409 (534)
.|.++++..
T Consensus 241 ~i~~~d~~~ 249 (416)
T 2pm9_A 241 SILIWDLRN 249 (416)
T ss_dssp CCCEEETTS
T ss_pred eEEEEeCCC
Confidence 577778875
No 107
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.59 E-value=0.01 Score=58.54 Aligned_cols=197 Identities=9% Similarity=0.036 Sum_probs=102.6
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC--eecccc---CCccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT--PVGKPL---VGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~--~~~~~i---~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
|..+.|||||++||.+.. ...|+|+|+.+++ .+. .+ ......++|+||+.++++...+ ..|..++
T Consensus 11 i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd 80 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVH-ELKEHNGQVTGVDWAPDSNRIVTCGTD----RNAYVWT 80 (372)
T ss_dssp CCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEE-EEECCSSCEEEEEEETTTTEEEEEETT----SCEEEEE
T ss_pred eEEEEECCCCCEEEEEeC-----CCEEEEEeCCCCcEEeee-eecCCCCcccEEEEeCCCCEEEEEcCC----CeEEEEE
Confidence 667799999999998633 2379999999886 332 22 2223469999999555554322 2466666
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCce---eEeeec-cccee-EEEeeeCCE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL---RVLTPR-VVGVD-TAASHRGNH 342 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~---~~l~~~-~~g~~-~~v~~~g~~ 342 (534)
+.+........+.. .......+.+++|+++|+....+ ..+++.++.....+ ..+... ...+. ..+.+++..
T Consensus 81 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 81 LKGRTWKPTLVILR-INRAARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EETTEEEEEEECCC-CSSCEEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred CCCCeeeeeEEeec-CCCceeEEEECCCCCEEEEEeCC---CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 64432111111111 22234457899999998775543 22444444332211 122111 11121 225566665
Q ss_pred EEEEEcCCCCCccEEEEEeCCCC---------------CCceE--EecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEE
Q 009441 343 FFITRRSDELFNSELLACPVDNT---------------SETTV--LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITT 404 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~---------------~~~~~--li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~ 404 (534)
|+..+.. +.+...++... ..... .+... ...+..+.+.++ .+++....+| .|.+
T Consensus 157 l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~--~i~i 228 (372)
T 1k8k_C 157 LAAGSCD-----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSRVAWVSHDS--TVCL 228 (372)
T ss_dssp EEEEETT-----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSEEEEEETTT--EEEE
T ss_pred EEEEcCC-----CCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECCCCCEEEEEeCCC--EEEE
Confidence 5544432 33444553210 00111 22222 224777887653 3555566666 4777
Q ss_pred EECCCCCC
Q 009441 405 YRLPAVGE 412 (534)
Q Consensus 405 ~~l~~~g~ 412 (534)
+++.. ++
T Consensus 229 ~d~~~-~~ 235 (372)
T 1k8k_C 229 ADADK-KM 235 (372)
T ss_dssp EEGGG-TT
T ss_pred EECCC-Cc
Confidence 78864 44
No 108
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.55 E-value=0.012 Score=59.41 Aligned_cols=116 Identities=17% Similarity=0.121 Sum_probs=70.1
Q ss_pred EECCCCCEEEEEEcCC---CCeEEEEEEEECCCCCeeccccC-CccceeEEccCCeEEEEEEC--C-C---CCCceEEEe
Q 009441 197 QVSPDNKLVAYAEDTK---GDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMD--E-I---LRPDKAWLH 266 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~---G~E~~~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg~l~Y~~~d--~-~---~r~~~v~~~ 266 (534)
.+.|||++| |..+.. ++ ..+.++|.++++.+. .|+ +....++.+|||+.+|+... . . .+...|..+
T Consensus 39 ~~~pd~~~v-yV~~~~~~~~~--~~V~ViD~~t~~v~~-~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 39 APAPDARRV-YVNDPAHFAAV--TQQFVIDGEAGRVIG-MIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCTTEE-EEEECGGGCSS--EEEEEEETTTTEEEE-EEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCCCCCEE-EEEcCcccCCC--CEEEEEECCCCeEEE-EEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 467999985 555543 12 489999999999876 333 33234999999955555431 0 0 112357777
Q ss_pred ecCCCCCCceEeeee-------cCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 267 KLEADQSNDICLYHE-------KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e-------~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
+..+......+.... ..|. .+.+|+||+++++. +....+.|.++|+++.+
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~---~~a~spDGk~lyVa-n~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPW---MTSLTPDGKTLLFY-QFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGG---GEEECTTSSEEEEE-ECSSSCEEEEEETTTTE
T ss_pred ECCCCeEEEEEECCCccccccCCCCc---eEEEcCCCCEEEEE-EcCCCCeEEEEECCCCc
Confidence 766553211111110 1121 25789999998874 33335679999998865
No 109
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.55 E-value=0.0096 Score=58.94 Aligned_cols=197 Identities=11% Similarity=0.058 Sum_probs=102.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-C---CccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-V---GVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.+..++|||||++||-+.. + .+|+|+|+++++.... .+ . +....++|+|||.++.+...+ ..+..+
T Consensus 18 ~v~~l~~sp~g~~las~~~-D----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D----~~v~iw 88 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG-D----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD----ATTCIW 88 (345)
T ss_dssp CEEEEEECTTSSCEEEEET-T----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT----SCEEEE
T ss_pred cEEEEEECCCCCEEEEEcC-C----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC----CcEEEE
Confidence 3566789999999997644 2 3699999988764321 11 1 223459999999555554322 234444
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCcee---Eeeeccccee-EEEeeeCCE
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR---VLTPRVVGVD-TAASHRGNH 342 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~---~l~~~~~g~~-~~v~~~g~~ 342 (534)
++.++..+-...+.. .......+.++|||++|+..+.+ ..|++.++....... .+......+. ..+.+++..
T Consensus 89 ~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 89 KKNQDDFECVTTLEG-HENEVKSVAWAPSGNLLATCSRD---KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EECCC-EEEEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EccCCCeEEEEEccC-CCCCceEEEEeCCCCEEEEEECC---CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 544331111122222 22334468899999988755433 235555555432122 2222222222 225566665
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEEC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRL 407 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l 407 (534)
|+..+.. ..-+|+... ....... .+... ...+..+.+.+ +.+++....++.-+|+-...
T Consensus 165 l~s~s~d---~~i~~w~~~--~~~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 165 LASASYD---DTVKLYREE--EDDWVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp EEEEETT---SCEEEEEEE--TTEEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEEEeCC---CcEEEEEec--CCCEEEEEEecCC-CCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 5544432 234454433 2110000 22222 23477888865 35666777788666664433
No 110
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.52 E-value=0.035 Score=55.25 Aligned_cols=201 Identities=8% Similarity=-0.009 Sum_probs=107.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-c-cCCccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~-i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.|||||++|+.+... ..|+++|+. ++.+.. . -.+....++|+|++ .++++...+ ..|..+++
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----~~i~iwd~ 234 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDST-----GRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD----ATVKLWDL 234 (383)
T ss_dssp CEEEEEEETTTTEEEEEETT-----SEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETT----SEEEEEEG
T ss_pred CeEEEEECCCCCEEEEECCC-----CCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC----CEEEEEeC
Confidence 36788999999999876442 379999994 544332 1 12223459999999 477776532 36777787
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-------cceeEEEeeeC
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-------VGVDTAASHRG 340 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-------~g~~~~v~~~g 340 (534)
.+......++...........+.+++ ||++|+.... ...|.+.++.+......+.... ..+...+.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 235 RNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ---RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp GGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES---SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred CCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC---CCcEEEEECCCCccccccccccccccccccceEEeccCCC
Confidence 65332222332222333445688999 9999876543 2467888887654122222110 00111233334
Q ss_pred CEEEEEEcCC----CCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECC
Q 009441 341 NHFFITRRSD----ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 341 ~~lyi~tn~~----~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 408 (534)
..+.+....+ +..++.|...++.+......+..+.....+..+.+..+ .+++... +| .|.+++++
T Consensus 312 ~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~--~i~iw~~~ 381 (383)
T 3ei3_B 312 DLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF--NILIWNRE 381 (383)
T ss_dssp SEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT--EEEEEECC
T ss_pred CceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC--cEEEEecC
Confidence 4433322110 12446677777755332111222221223444566543 3444444 55 46666665
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.49 E-value=0.06 Score=52.26 Aligned_cols=193 Identities=8% Similarity=0.025 Sum_probs=105.5
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC----eecc-ccCCccceeEEccCCe-EEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT----PVGK-PLVGVTASVEWAGNEA-LVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~----~~~~-~i~~~~~~~~Ws~Dg~-l~Y~~~d~~~r~~~v~~ 265 (534)
.|..+.|||||++||.+.. + ..|+|+|+.+++ .... ........++|+|++. ++++...+ ..|+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~-d----~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~~ 83 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSW-D----GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ----GEILK 83 (342)
T ss_dssp CEEEEEEEGGGTEEEEEET-T----SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT----SCEEE
T ss_pred cEEEEEEcCCCCEEEEEcC-C----CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC----CeEEE
Confidence 4677899999999988753 2 369999998887 3221 1122234599999997 77776532 36788
Q ss_pred eec-CCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC---------CCceeEeeecccceeE
Q 009441 266 HKL-EADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK---------PEELRVLTPRVVGVDT 334 (534)
Q Consensus 266 ~~l-gt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~---------~~~~~~l~~~~~g~~~ 334 (534)
+++ .+.. ...+... .......+.+++ +++++..+.+ ..|.+.++.. ......+ .. .+...
T Consensus 84 wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~-~~-~~~v~ 154 (342)
T 1yfq_A 84 VDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWD---GLIEVIDPRNYGDGVIAVKNLNSNNT-KV-KNKIF 154 (342)
T ss_dssp ECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETT---SEEEEECHHHHTTBCEEEEESCSSSS-SS-CCCEE
T ss_pred EEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCC---CeEEEEcccccccccccccCCeeeEE-ee-CCceE
Confidence 887 6542 2233220 222334577888 8877654432 3466666543 2201111 11 12223
Q ss_pred EEeeeCCEEEEEEcCCCCCccEEEEEeCCC-CCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCC
Q 009441 335 AASHRGNHFFITRRSDELFNSELLACPVDN-TSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 335 ~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~-~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.+.-.++.+++.+. .+.|...++.. ...............+..+.+.+ +.+++....+|.- .+++++.
T Consensus 155 ~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i--~i~~~~~ 225 (342)
T 1yfq_A 155 TMDTNSSRLIVGMN-----NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRV--AVEFFDD 225 (342)
T ss_dssp EEEECSSEEEEEES-----TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEE--EEEECCT
T ss_pred EEEecCCcEEEEeC-----CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcE--EEEEEcC
Confidence 33333444444333 24577777765 32211122222233578888875 4566666667754 4445553
No 112
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.49 E-value=0.061 Score=54.12 Aligned_cols=195 Identities=13% Similarity=0.060 Sum_probs=104.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.|||||++||.+.. + .+|+|+|+++++.+.. +. +....++|+|||..+++...+ ..|..+++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~-d----~~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~p~~~~l~s~s~d----~~v~iwd~ 194 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAE-D----RLIRIWDIENRKIVMI-LQGHEQDIYSLDYFPSGDKLVSGSGD----RTVRIWDL 194 (393)
T ss_dssp BEEEEEECTTSSEEEEEET-T----SCEEEEETTTTEEEEE-ECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEET
T ss_pred eEEEEEECCCCCEEEEEcC-C----CeEEEEECCCCcEEEE-EccCCCCEEEEEEcCCCCEEEEecCC----CcEEEEEC
Confidence 3778899999999997654 2 3699999999876542 22 223459999999444554332 36777788
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCcceeEEEEEeCCCCCceeEeee------cccceeE--EEeee
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTP------RVVGVDT--AASHR 339 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~------~~~g~~~--~v~~~ 339 (534)
.++. ....+... .....+.+++ ||++|+..+.+ ..|.+.++.++.....+.. ...+... .++++
T Consensus 195 ~~~~--~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 195 RTGQ--CSLTLSIE--DGVTTVAVSPGDGKYIAAGSLD---RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp TTTE--EEEEEECS--SCEEEEEECSTTCCEEEEEETT---SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred CCCe--eEEEEEcC--CCcEEEEEECCCCCEEEEEcCC---CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 7652 22223221 2234567888 88887765433 3466667766541111210 0011112 25566
Q ss_pred CCEEEEEEcCCCCCccEEEEEeCCCCCC---------ceE--EecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEEC
Q 009441 340 GNHFFITRRSDELFNSELLACPVDNTSE---------TTV--LIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRL 407 (534)
Q Consensus 340 g~~lyi~tn~~~~~~~~L~~~~~~~~~~---------~~~--li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l 407 (534)
|..|+..+. .+.|...++..... ... .+....+ .+..+.+.. +..++....+| .|+++++
T Consensus 268 g~~l~s~s~-----d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sgs~D~--~v~iwd~ 339 (393)
T 1erj_A 268 GQSVVSGSL-----DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD-FVLSVATTQNDEYILSGSKDR--GVLFWDK 339 (393)
T ss_dssp SSEEEEEET-----TSEEEEEEC---------------CEEEEEECCSS-CEEEEEECGGGCEEEEEETTS--EEEEEET
T ss_pred CCEEEEEeC-----CCEEEEEECCCCCCcccccCCCCCcceEEEecccC-cEEEEEECCCCCEEEEEeCCC--eEEEEEC
Confidence 666544332 13444455432110 001 1112222 356666654 34566666676 4667787
Q ss_pred CCCCC
Q 009441 408 PAVGE 412 (534)
Q Consensus 408 ~~~g~ 412 (534)
.+ |+
T Consensus 340 ~~-~~ 343 (393)
T 1erj_A 340 KS-GN 343 (393)
T ss_dssp TT-CC
T ss_pred CC-Ce
Confidence 64 44
No 113
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.45 E-value=0.021 Score=55.43 Aligned_cols=236 Identities=8% Similarity=-0.033 Sum_probs=121.9
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~ 271 (534)
..++.|+|||+.|.|+-..+| .|+.++. +|+...... .+...+++|++||.++.... ....|++++.. +
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~----~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~----~~~~v~~~~~~-g 116 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGR----RVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEH----GRRAITRSDAD-G 116 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTT----EEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEET----TTTEEEEECTT-S
T ss_pred ccCCeEeCCCCEEEEEECCCC----EEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEEC----CCCEEEEECCC-C
Confidence 456899999998888754443 4777788 455322111 22335689999987654432 12468777763 2
Q ss_pred CCCceEeeeecCC-ce--EEEEEEcCCCcEEEEEe--cC------------cceeEEEEEeCCCCCceeEeeecccce-e
Q 009441 272 QSNDICLYHEKDD-IY--SLGLQASESKKFLFIAS--ES------------KITRFVFYLDVSKPEELRVLTPRVVGV-D 333 (534)
Q Consensus 272 ~~~d~lv~~e~d~-~~--~v~~~~S~Dg~~l~i~~--~~------------~~~~ev~~~d~~~~~~~~~l~~~~~g~-~ 333 (534)
.-+.+...... .+ .-++.+++||+..+-.. .. .....||.++.+++. +..+. ..... .
T Consensus 117 --~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-~~~~~-~~~~p~g 192 (305)
T 3dr2_A 117 --QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-LQRMA-DLDHPNG 192 (305)
T ss_dssp --CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-CEEEE-EESSEEE
T ss_pred --CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-EEEEe-cCCCCcc
Confidence 11222221111 11 11467889998554211 00 123679999986654 44443 21111 1
Q ss_pred EEEeeeCCEEEEEEcCC-CCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCC
Q 009441 334 TAASHRGNHFFITRRSD-ELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAV 410 (534)
Q Consensus 334 ~~v~~~g~~lyi~tn~~-~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~ 410 (534)
..+++++..||+..... ...+.+|.+++++......- ++.........++.+.. +.|++.. .+ .|.+++.+
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~---gv~~~~~~-- 266 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT---GVCVFDSD-- 266 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS---EEEEECTT--
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC---cEEEECCC--
Confidence 23678888888876531 01135787777653221111 22211112245566654 3555554 22 38888775
Q ss_pred CCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEEC
Q 009441 411 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 462 (534)
Q Consensus 411 g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~ 462 (534)
|+.+ ..+.+|+....+. ++ .+++.|+++.+. .+|++++
T Consensus 267 g~~~------~~~~~~~~~~~~~-f~--~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 267 GQLL------GHIPTPGTASNCT-FD--QAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp SCEE------EEEECSSCCCEEE-EC--TTSCEEEEEETT-----EEEEEEC
T ss_pred CCEE------EEEECCCceeEEE-Ee--CCCCEEEEEcCC-----eEEEEEC
Confidence 6642 2455554221221 12 355667765442 6777654
No 114
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.45 E-value=0.009 Score=59.68 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=63.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC-CCCeecc-cc--C--Cc-cceeEEccCCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGK-PL--V--GV-TASVEWAGNEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~-tg~~~~~-~i--~--~~-~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.+..+.|||||++|+.+ +.+ ++ +|+++|++ +|+.... .+ + +. ...++|+|||.++|+...... .-.+|
T Consensus 146 ~~~~~~~spdG~~l~~~-~~~-~~--~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-~v~v~ 220 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSA-DLT-AN--KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN-RICEY 220 (365)
T ss_dssp CEEEEEECTTSSEEEEE-ETT-TT--EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT-EEEEE
T ss_pred cceEEEECCCCCEEEEE-cCC-CC--EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC-eEEEE
Confidence 35678999999997554 433 22 68899998 7875321 12 1 21 345899999955565543211 11344
Q ss_pred EeecCCCCCCc--eEeeeecC---C-c-------eEEEEE-EcCCCcEEEEEecCcc---eeEEEEEeCC
Q 009441 265 LHKLEADQSND--ICLYHEKD---D-I-------YSLGLQ-ASESKKFLFIASESKI---TRFVFYLDVS 317 (534)
Q Consensus 265 ~~~lgt~~~~d--~lv~~e~d---~-~-------~~v~~~-~S~Dg~~l~i~~~~~~---~~ev~~~d~~ 317 (534)
..+..++.... ..+-.-+. . . .-..+. +||||++|++...... ...|.+.+++
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 33433331100 00110000 0 1 234688 9999999876432222 1155555553
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.42 E-value=0.11 Score=52.65 Aligned_cols=250 Identities=14% Similarity=0.094 Sum_probs=122.7
Q ss_pred eEEeecchhcCCCCcEEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC---ccceeEEccCCeEEE
Q 009441 176 HLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNEALVY 251 (534)
Q Consensus 176 evllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~---~~~~~~Ws~Dg~l~Y 251 (534)
+-+||.-.+.. +| .+.-+.||++ +.||.+.| + +|+|||+.+|+.+.. .+.+ ....++|+|||.++.
T Consensus 94 ~~~l~ap~~~~--d~-y~~~l~wS~~-n~lAvgld--~----tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 94 DRILDAPEIRN--DY-YLNLVDWSSG-NVLAVALD--N----SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp SEEEECTTCCC--CT-TCBCEEECTT-SEEEEEET--T----EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred ceEEECCCCcc--cc-cceeEEECCC-CEEEEEeC--C----EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE
Confidence 44578555542 32 2345689986 58998875 2 799999999987642 2221 235699999995555
Q ss_pred EEECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeeccc
Q 009441 252 ITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVV 330 (534)
Q Consensus 252 ~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~~~ 330 (534)
+...+ ..|..+++.++. ....+.. ...... .++.+++.++..+.. ..+++.+..... ....+.....
T Consensus 164 sgs~D----g~v~iWd~~~~~--~~~~~~~-h~~~v~--~~s~~~~~l~sgs~d---~~i~~~d~~~~~~~~~~~~~h~~ 231 (420)
T 4gga_A 164 VGTSS----AEVQLWDVQQQK--RLRNMTS-HSARVG--SLSWNSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQ 231 (420)
T ss_dssp EEETT----SCEEEEETTTTE--EEEEECC-CSSCEE--EEEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSS
T ss_pred EEECC----CeEEEEEcCCCc--EEEEEeC-CCCceE--EEeeCCCEEEEEeCC---CceeEeeecccceeeEEeccccc
Confidence 55432 256667776542 1122222 112222 344567765543322 345555655433 1222222221
Q ss_pred cee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE---EecCCCCceeeeEEEeC--CEEEEEEe--eCCeeEE
Q 009441 331 GVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLFI--DHLAVYER--EGGLQKI 402 (534)
Q Consensus 331 g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~---li~~~~~~~l~~~~~~~--~~lv~~~~--~~g~~~l 402 (534)
.+. ..+.+.+..++...+. +.+...+......... ..... ...+..+.+.. ..+++... .++ .|
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~~~-~~~V~~~~~~p~~~~~la~~~gs~D~--~I 303 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQSNVLATGGGTSDR--HI 303 (420)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEECCC-SSCEEEEEECTTCTTEEEEEECTTTC--EE
T ss_pred ceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeeccc-CCceeeeeeCCCcccEEEEEeecCCC--EE
Confidence 111 2245566666555442 2344445443221111 12222 22366666653 34444432 344 57
Q ss_pred EEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 403 TTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 403 ~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
.++++.+ |+.+ ..+........+. ...+++.++....+ .-+.++.||..+++.
T Consensus 304 ~iwd~~t-~~~~------~~~~~~~~v~~~~---~~~~~~~lv~~sg~--~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 304 RIWNVCS-GACL------SAVDAHSQVCSIL---WSPHYKELISGHGF--AQNQLVIWKYPTMAK 356 (420)
T ss_dssp EEEETTT-TEEE------EEEECSSCEEEEE---EETTTTEEEEEECT--TTCCEEEEETTTCCE
T ss_pred EEEeCCc-cccc------eeeccccceeeee---ecCCCCeEEEEEec--CCCEEEEEECCCCcE
Confidence 7788875 5422 1222222111111 12234455443222 235788899888774
No 116
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.38 E-value=0.025 Score=60.88 Aligned_cols=197 Identities=12% Similarity=0.098 Sum_probs=105.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec-ccc---CCccceeEEccCC-eEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~-~~i---~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~ 266 (534)
.|..+++||||++||-+.. + .+|+|+|+.+++... ..+ .+....++|+||| .++-.. ....+...|+.+
T Consensus 61 ~v~~~~~spdg~~lasg~~-d----~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~-~~~~~~~~v~~w 134 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDV-H----GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVG-EGRERFGHVFLF 134 (611)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEE-CCSSCSEEEEET
T ss_pred ceEEEEECCCCcEEEEEeC-C----CCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEE-CCCCceeEEEEe
Confidence 3777899999999997654 2 369999998764321 112 2233569999999 554443 322333478888
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEE
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi 345 (534)
+.|+.. . .+.. .......+.++||++++++......+ +.+.+.........+......+. ..++++|..|+.
T Consensus 135 d~~~~~--~--~l~g-h~~~v~~v~f~p~~~~~l~s~s~D~~--v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 135 DTGTSN--G--NLTG-QARAMNSVDFKPSRPFRIISGSDDNT--VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp TTCCBC--B--CCCC-CSSCEEEEEECSSSSCEEEEEETTSC--EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eCCCCc--c--eecC-CCCCceEEEECCCCCeEEEEEeCCCe--EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEE
Confidence 766432 1 1222 22334467899999876665544333 44445544321122222222222 235677665544
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEEecC------CCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVLIPH------RESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~li~~------~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.+. + +.+...++.+..... .+.. .....+..+.+.++ .+++....++. |.++++.+
T Consensus 208 ~s~-D----~~i~lwd~~~g~~~~-~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~--v~lWd~~~ 270 (611)
T 1nr0_A 208 TGG-D----GTIVLYNGVDGTKTG-VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT--IKIWNVAT 270 (611)
T ss_dssp EET-T----SCEEEEETTTCCEEE-ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE--EEEEETTT
T ss_pred EEC-C----CcEEEEECCCCcEee-eeccccccccccCCCEEEEEECCCCCEEEEEeCCCe--EEEEeCCC
Confidence 333 2 334445554332111 2211 11224778888754 45666666764 55667664
No 117
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.37 E-value=0.034 Score=59.34 Aligned_cols=193 Identities=13% Similarity=0.039 Sum_probs=106.0
Q ss_pred EECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC-C-ccceeEEccCCeEEEEEECCCCCCceEEEeecC--CCC
Q 009441 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-G-VTASVEWAGNEALVYITMDEILRPDKAWLHKLE--ADQ 272 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~-~-~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg--t~~ 272 (534)
.++.|..-++|....+.+ ++.|+|+++++.+.. ++ + ....+.++|||+++|+... ...|..+++. +.
T Consensus 160 ~~~~d~~~~~~V~~~~~~---~V~viD~~t~~v~~~-i~~g~~p~~v~~SpDGr~lyv~~~----dg~V~viD~~~~t~- 230 (567)
T 1qks_A 160 MNDWDLENLFSVTLRDAG---QIALIDGSTYEIKTV-LDTGYAVHISRLSASGRYLFVIGR----DGKVNMIDLWMKEP- 230 (567)
T ss_dssp CSCCCGGGEEEEEETTTT---EEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEET----TSEEEEEETTSSSC-
T ss_pred ccccCCCceEEEEeCCCC---eEEEEECCCCeEEEE-EeCCCCccceEECCCCCEEEEEcC----CCeEEEEECCCCCC-
Confidence 355665545555554332 799999999988753 32 2 2346899999966677643 2478888884 43
Q ss_pred CCceEeeeecCCceEEEEEEc----CCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec---ccc--------e-eEEE
Q 009441 273 SNDICLYHEKDDIYSLGLQAS----ESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR---VVG--------V-DTAA 336 (534)
Q Consensus 273 ~~d~lv~~e~d~~~~v~~~~S----~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~---~~g--------~-~~~v 336 (534)
.++.+-.-...-..+.+| |||+++++... ..+.+.++|..+.+..+.+.-+ .++ + ....
T Consensus 231 ---~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~--~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 231 ---TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY--WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp ---CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE--ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred ---cEeEEEecCCCCceeEEccccCCCCCEEEEEEc--cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 222221111122357789 69999987532 3356778887775412222111 011 1 1123
Q ss_pred eeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 337 SHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 337 ~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
++++..+++ +.. ..++|..++..+...... -++.. ..+.++.+.. .++++... +..+|.++|+.+ ++
T Consensus 306 s~~~~~~vv-~~~---~~g~v~~vd~~~~~~~~v~~i~~~--~~~~d~~~~pdgr~~~va~~--~sn~V~ViD~~t-~k 375 (567)
T 1qks_A 306 SHYRPEFIV-NVK---ETGKILLVDYTDLNNLKTTEISAE--RFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKE-GK 375 (567)
T ss_dssp CSSSSEEEE-EET---TTTEEEEEETTCSSEEEEEEEECC--SSEEEEEECTTSCEEEEEEG--GGTEEEEEETTT-TE
T ss_pred cCCCCEEEE-Eec---CCCeEEEEecCCCccceeeeeecc--ccccCceECCCCCEEEEEeC--CCCeEEEEECCC-Cc
Confidence 455555544 333 346888888765321111 23322 2356666654 35555443 445688888875 44
No 118
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.34 E-value=0.077 Score=53.75 Aligned_cols=32 Identities=13% Similarity=0.194 Sum_probs=24.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT 228 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~ 228 (534)
.|..+.|||||++||.+... ..|+|+|+.+++
T Consensus 30 ~V~~v~~s~~g~~la~g~~d-----g~v~iw~~~~~~ 61 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKG-----GRVVIFQQEQEN 61 (447)
T ss_dssp SEEEEEECSSSSEEEEEETT-----SEEEEEEECC--
T ss_pred cEEEEEECCCCCEEEEEcCC-----CeEEEEEecCCC
Confidence 47788999999999987542 379999998876
No 119
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.33 E-value=0.064 Score=53.52 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=48.7
Q ss_pred EEEECCCCCEEEEEEc-----CCCCeEEEEEEEECCCCCeecc-ccC-------CccceeEEccCCeEEEEEECCCCCCc
Q 009441 195 CFQVSPDNKLVAYAED-----TKGDEIYTVYVIDIETGTPVGK-PLV-------GVTASVEWAGNEALVYITMDEILRPD 261 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d-----~~G~E~~~l~v~dl~tg~~~~~-~i~-------~~~~~~~Ws~Dg~l~Y~~~d~~~r~~ 261 (534)
.+.+||||++|..+-. ..|.....|.++|+++++.+.. .+. .....++++|||+++|+.+.. ...
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~--~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS--PAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES--SSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC--CCC
Confidence 7899999999887754 2455567899999999887643 121 113458999999767776421 123
Q ss_pred eEEEeecCC
Q 009441 262 KAWLHKLEA 270 (534)
Q Consensus 262 ~v~~~~lgt 270 (534)
.|..+++.+
T Consensus 132 ~v~v~d~~~ 140 (361)
T 2oiz_A 132 SIGIVDVAK 140 (361)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 455555543
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.28 E-value=0.17 Score=50.08 Aligned_cols=196 Identities=10% Similarity=0.119 Sum_probs=106.1
Q ss_pred EEEEEEECC-CCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc---------------cCCccceeEEccCC-eEEEEEE
Q 009441 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP---------------LVGVTASVEWAGNE-ALVYITM 254 (534)
Q Consensus 192 ~l~~~~~SP-DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~---------------i~~~~~~~~Ws~Dg-~l~Y~~~ 254 (534)
.|..+.||| ||++||.+.. +| .|+|+|+.+++..... ..+....++|+|++ .++.+..
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGS-DG----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CEEEEEECTTTCCEEEEEET-TS----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred cEEEEEEecCCCCEEEEEcC-CC----eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 477789999 9999998755 23 5999999988654321 12223458999954 5666654
Q ss_pred CCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcC---CCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc
Q 009441 255 DEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE---SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG 331 (534)
Q Consensus 255 d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~---Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g 331 (534)
.+ ..|..+++.+.. ....+.... ....+.+++ ++.+++....+ ..+++.++..+.....+......
T Consensus 120 ~d----~~i~iwd~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~~~~~~~~~~~~ 188 (408)
T 4a11_B 120 FD----KTLKVWDTNTLQ--TADVFNFEE--TVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGSCSHILQGHRQE 188 (408)
T ss_dssp TT----SEEEEEETTTTE--EEEEEECSS--CEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSCCCEEECCCCSC
T ss_pred CC----CeEEEeeCCCCc--cceeccCCC--ceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcceeeeecCCCCc
Confidence 22 367777877652 222333222 222345555 55576654432 35777787765422333322222
Q ss_pred ee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEe--------------cCCCCceeeeEEEeCC-EEEEEEe
Q 009441 332 VD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI--------------PHRESVKLQDIQLFID-HLAVYER 395 (534)
Q Consensus 332 ~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li--------------~~~~~~~l~~~~~~~~-~lv~~~~ 395 (534)
+. ..+.+++..+++....+ +.|...++.........+ .......+..+.+.++ ..++...
T Consensus 189 v~~~~~~~~~~~ll~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASAD----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp EEEEEECSSCTTEEEEEETT----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCCcEEEEEcCC----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 22 23566677555444432 345555554321000011 0112234778888654 3455555
Q ss_pred eCCeeEEEEEECCC
Q 009441 396 EGGLQKITTYRLPA 409 (534)
Q Consensus 396 ~~g~~~l~~~~l~~ 409 (534)
.+| .|.++++..
T Consensus 265 ~dg--~i~vwd~~~ 276 (408)
T 4a11_B 265 TDN--RMRLWNSSN 276 (408)
T ss_dssp TTS--CEEEEETTT
T ss_pred CCC--eEEEEECCC
Confidence 566 477778875
No 121
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.27 E-value=0.09 Score=50.68 Aligned_cols=195 Identities=11% Similarity=0.066 Sum_probs=105.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc--ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~--~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+....++|||++|+-+.+. .+|+|+|+.+|+.+.. .-.+....++|+|++.++.+...+ ..|..+++.
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D----~~v~lWd~~ 127 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD----LTVKLWNWE 127 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT----SCEEEEEGG
T ss_pred cEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC----CeEEEEECC
Confidence 36677899999999976542 4799999999987642 112223459999999665665432 356666776
Q ss_pred CCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCcceeEEEEEeCCCCCceeEeee-cccceeE-EEee--eCCEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDT-AASH--RGNHFF 344 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~-~~~g~~~-~v~~--~g~~ly 344 (534)
++. .-...+.. .......+.++| |++.++..+.+ ..|.+.++........+.. ...++.. .+.+ ++..|+
T Consensus 128 ~~~-~~~~~~~~-h~~~v~~v~~~p~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 128 NNW-ALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLD---RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp GTT-EEEEEECC-CCSCEEEEEECTTCTTEEEEEETT---SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred CCc-chhhhhcc-cCCcEEEEEECCCCCCEEEEEeCC---CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 542 11223332 223444678898 56666543322 3466667765431122222 2122221 1333 233333
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
. ... .+.|...++.+.... ..+..... .+..+.+.++ .+++....+|. |.+++..+
T Consensus 203 s-~s~----D~~i~iWd~~~~~~~-~~~~~h~~-~v~~~~~~p~~~~l~s~s~Dg~--i~iWd~~~ 259 (304)
T 2ynn_A 203 T-ASD----DLTIKIWDYQTKSCV-ATLEGHMS-NVSFAVFHPTLPIIISGSEDGT--LKIWNSST 259 (304)
T ss_dssp E-EET----TSEEEEEETTTTEEE-EEEECCSS-CEEEEEECSSSSEEEEEETTSC--EEEEETTT
T ss_pred E-EcC----CCeEEEEeCCCCccc-eeeCCCCC-CEEEEEECCCCCEEEEEcCCCe--EEEEECCC
Confidence 2 222 245666676543211 12332222 3666666653 56777777774 56668764
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.13 Score=50.53 Aligned_cols=153 Identities=7% Similarity=0.029 Sum_probs=88.8
Q ss_pred EEEEEEECC--CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc---ccCCccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSP--DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SP--DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~---~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.+..+.++| +|++|+-+.. +| +|+++|+.+++.+.. ........++|+|||.++.+... ...|..+
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~-dg----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~----dg~i~iw 197 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADN-RG----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP----DGILDVY 197 (343)
T ss_dssp CEEEEECCC---CCEEEEEET-TC----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT----TSCEEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeC-CC----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC----CCEEEEE
Confidence 377889999 9999986653 33 699999999987532 11212345899999976666532 2367777
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeee---cccce---eEEEeeeC
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---RVVGV---DTAASHRG 340 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~---~~~g~---~~~v~~~g 340 (534)
++.++.. -...+..........+.+++||++|+..+ .. .|.+.|+........+.. ..... ...++++|
T Consensus 198 d~~~~~~-~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 198 NLSSPDQ-ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ---TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp ESSCTTS-CCEECCCCTTSCEEEEEECTTSSEEEEEE-SS---BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred ECCCCCC-CccEEeccCCCCEEEEEEeCCCCEEEEEe-CC---eEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 8876532 11234331233445688999999987665 22 678888876541111211 00011 13466777
Q ss_pred CEEEEEEcCCCCCccEEEEE
Q 009441 341 NHFFITRRSDELFNSELLAC 360 (534)
Q Consensus 341 ~~lyi~tn~~~~~~~~L~~~ 360 (534)
..|+..+.. ....+|+.+
T Consensus 273 ~~l~~~s~~--d~~i~v~~~ 290 (343)
T 3lrv_A 273 KNMIAYSNE--SNSLTIYKF 290 (343)
T ss_dssp SEEEEEETT--TTEEEEEEE
T ss_pred CEEEEecCC--CCcEEEEEE
Confidence 766554442 223455544
No 123
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.25 E-value=0.055 Score=53.19 Aligned_cols=194 Identities=13% Similarity=0.061 Sum_probs=102.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-c---cCCccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P---LVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~---i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.+..+.|+|||++|+.+.. +| .|+++|+.+++.... . .......++|+||+.++++...+ ..|+.++
T Consensus 54 ~v~~~~~~~~~~~l~~~~~-dg----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~d 124 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT-DR----NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS----RVISICY 124 (372)
T ss_dssp CEEEEEEETTTTEEEEEET-TS----CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT----SSEEEEE
T ss_pred cccEEEEeCCCCEEEEEcC-CC----eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC----CEEEEEE
Confidence 4778899999999997754 33 599999988864332 1 12223458999999554554322 2455555
Q ss_pred cCCCCCCc-eEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC------------------CCCceeEeeec
Q 009441 268 LEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS------------------KPEELRVLTPR 328 (534)
Q Consensus 268 lgt~~~~d-~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~------------------~~~~~~~l~~~ 328 (534)
+.+..... ...+..........+.+++|+++++....+ ..+++.++. .+.....+...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD---FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS 201 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT---SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC---CCEEEEEcccccccccccccccccccchhhheEecCCC
Confidence 54432111 111111222334568899999988765432 345666643 11111222211
Q ss_pred cccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEE
Q 009441 329 VVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTY 405 (534)
Q Consensus 329 ~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~ 405 (534)
...+. ..+++++..|+..+.. +.|...++.+.... ..+..... .+..+.+.+ +.+++.. .++.-.++-+
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~-~~~~~~~~-~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHD-----STVCLADADKKMAV-ATLASETL-PLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGGTTEE-EEEECSSC-CEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcee-EEEccCCC-CeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 11111 2255666666554432 45666666543211 12332222 477777764 4555555 6665444433
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.24 E-value=0.04 Score=56.26 Aligned_cols=199 Identities=12% Similarity=0.148 Sum_probs=108.9
Q ss_pred EEEEEEECCCCC-EEEEEEcCCCCeEEEEEEEECCCCCeec------ccc---CCccceeEEccCC-eEEEEEECCCCCC
Q 009441 192 SVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVG------KPL---VGVTASVEWAGNE-ALVYITMDEILRP 260 (534)
Q Consensus 192 ~l~~~~~SPDG~-~LA~~~d~~G~E~~~l~v~dl~tg~~~~------~~i---~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~ 260 (534)
.+..+.|+|+++ +|+.+ +.+| .|+|+|+.++.... ..+ ......++|+|++ .++.+...+
T Consensus 183 ~v~~l~~~~~~~~~l~s~-~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d---- 253 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSA-SDDH----TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD---- 253 (430)
T ss_dssp CCCCEEECTTSTTEEEEE-CTTS----CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT----
T ss_pred CeEEEEeCCCCCCeEEEE-eCCC----eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC----
Confidence 356679999999 65554 3344 59999998753211 011 1223458999966 777776432
Q ss_pred ceEEEeecCCCCC-CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeeccccee-EEEe
Q 009441 261 DKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAAS 337 (534)
Q Consensus 261 ~~v~~~~lgt~~~-~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~~~g~~-~~v~ 337 (534)
..|+.+++.+... .....+.. ...-...+.++++++++++..... ..|.+.++.... ....+......+. ..++
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~d--g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETT--SEEEEEETTCTTSCSEEEECCSSCEEEEEEC
T ss_pred CeEEEEECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEeCC--CeEEEEeCCCCCCCeEEeecCCCCEEEEEEC
Confidence 4688888865421 11222322 222234578999999766554332 357788887643 2333332222222 2366
Q ss_pred eeCCEEEEEEcCCCCCccEEEEEeCCCCCC-----------ceEEec-CCCCceeeeEEEeCC--EEEEEEeeCCeeEEE
Q 009441 338 HRGNHFFITRRSDELFNSELLACPVDNTSE-----------TTVLIP-HRESVKLQDIQLFID--HLAVYEREGGLQKIT 403 (534)
Q Consensus 338 ~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~-----------~~~li~-~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~ 403 (534)
+++..+++....+ +.|...++..... ...+.. ......+..+.+.++ .+++....+|.-+
T Consensus 331 p~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~-- 404 (430)
T 2xyi_A 331 PHNETILASSGTD----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ-- 404 (430)
T ss_dssp SSCTTEEEEEETT----SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE--
T ss_pred CCCCCEEEEEeCC----CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE--
Confidence 7776666655432 3454555543110 012221 122234888888764 3777777777544
Q ss_pred EEECC
Q 009441 404 TYRLP 408 (534)
Q Consensus 404 ~~~l~ 408 (534)
+++++
T Consensus 405 iw~~~ 409 (430)
T 2xyi_A 405 VWQMA 409 (430)
T ss_dssp EEEEC
T ss_pred EeEcc
Confidence 44554
No 125
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.24 E-value=0.15 Score=48.62 Aligned_cols=82 Identities=20% Similarity=0.310 Sum_probs=52.2
Q ss_pred eEEeecchhcCCCCcEEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC---ccceeEEccCCeEEE
Q 009441 176 HLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNEALVY 251 (534)
Q Consensus 176 evllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~---~~~~~~Ws~Dg~l~Y 251 (534)
+.+||.-.+.. +|+ +..+.||+++ .||.+.| + +|+|+|+++|+.+.. ...+ ....++|+|+|.++.
T Consensus 14 ~rvldap~~~~--d~y-~~~l~WS~~~-~lAvg~D--~----tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~ 83 (318)
T 4ggc_A 14 DRILDAPEIRN--DYY-LNLVDWSSGN-VLAVALD--N----SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA 83 (318)
T ss_dssp SEEEECTTCCC--CTT-CBCEEECTTS-EEEEEET--T----EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred CEEeeCCCCcc--ccc-ceEEEECCCC-EEEEEeC--C----EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEE
Confidence 44578444432 222 3446899987 8888764 2 699999999987652 2221 234589999996556
Q ss_pred EEECCCCCCceEEEeecCCC
Q 009441 252 ITMDEILRPDKAWLHKLEAD 271 (534)
Q Consensus 252 ~~~d~~~r~~~v~~~~lgt~ 271 (534)
+...+ ..|..+++.++
T Consensus 84 sgs~D----g~v~iw~~~~~ 99 (318)
T 4ggc_A 84 VGTSS----AEVQLWDVQQQ 99 (318)
T ss_dssp EEETT----SEEEEEETTTT
T ss_pred EEECC----CcEEEeecCCc
Confidence 65432 36777777654
No 126
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.23 E-value=0.048 Score=55.34 Aligned_cols=113 Identities=7% Similarity=-0.021 Sum_probs=63.2
Q ss_pred EEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCC
Q 009441 288 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTS 366 (534)
Q Consensus 288 v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~ 366 (534)
..+.+++++..++..........|.+.++.++. ..........+. ..+.++++.+++.+.. ..+.|...++.+..
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-~~~~~~~~~~v~~~~~~~~~~~lv~~sg~---~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHGF---AQNQLVIWKYPTMA 355 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-EEEEEECSSCEEEEEEETTTTEEEEEECT---TTCCEEEEETTTCC
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-cceeeccccceeeeeecCCCCeEEEEEec---CCCEEEEEECCCCc
Confidence 346778877776665443334567777887754 222222212222 2356777777766542 34567777775533
Q ss_pred CceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECC
Q 009441 367 ETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 367 ~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 408 (534)
.. ..+..+.+ .|..+.+.++ ..++....|+. |++.++.
T Consensus 356 ~v-~~l~gH~~-~V~~l~~spdg~~l~S~s~D~t--vriWdv~ 394 (420)
T 4gga_A 356 KV-AELKGHTS-RVLSLTMSPDGATVASAAADET--LRLWRCF 394 (420)
T ss_dssp EE-EEECCCSS-CEEEEEECTTSSCEEEEETTTE--EEEECCS
T ss_pred EE-EEEcCCCC-CEEEEEEcCCCCEEEEEecCCe--EEEEECC
Confidence 21 13333333 4888888754 56777777885 4455654
No 127
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.023 Score=60.21 Aligned_cols=187 Identities=13% Similarity=0.102 Sum_probs=99.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-c----cCC-ccceeEEccCCeEEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P----LVG-VTASVEWAGNEALVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~----i~~-~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~ 265 (534)
.|..++|||||++||.+.. +| +++|+|.++ .+.. . ++. ....++|+|||.++++..++ ..|..
T Consensus 87 ~V~~vawSPdG~~LAs~s~-dg----~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D----GtVkI 155 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSN-NG----NVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED----GELQF 155 (588)
T ss_dssp CEEEEEECSSSSCEEEEET-TS----CEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT----SEEEE
T ss_pred cEEEEEECCCCCEEEEEeC-CC----cEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC----CEEEE
Confidence 4778899999999997654 33 488888543 2111 1 111 23469999999666776543 36767
Q ss_pred eecCCCCCCce-----Eeee---ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-c--eeEeeeccccee-
Q 009441 266 HKLEADQSNDI-----CLYH---EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-E--LRVLTPRVVGVD- 333 (534)
Q Consensus 266 ~~lgt~~~~d~-----lv~~---e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~--~~~l~~~~~g~~- 333 (534)
|++.++.-.+. ..+. .....+...+++|||| ++. +.. .+.+++.++.+.. . ++.+.+......
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laa-ss~--D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVA-ALS--NNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEE-EET--TCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEE-EeC--CCeEEEEECCCCccccceeeecccccCcEE
Confidence 77755421111 1121 1123466678999999 433 322 3456677776644 1 123322211111
Q ss_pred -EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEE--eCC-EEEEEEeeCCeeEEEEE
Q 009441 334 -TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQL--FID-HLAVYEREGGLQKITTY 405 (534)
Q Consensus 334 -~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~--~~~-~lv~~~~~~g~~~l~~~ 405 (534)
..+. |+.+.. +. + ..+...++.+.... ....+....+.++.+ .++ ..++...++|. +|+.+
T Consensus 231 svaFs--g~~LAS-a~-~----~tIkLWd~~~~~~~--~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 231 DLKIV--DYKVVL-TC-P----GYVHKIDLKNYSIS--SLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp CEEEE--TTEEEE-EC-S----SEEEEEETTTTEEE--EEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEEEE--CCEEEE-Ee-C----CeEEEEECCCCeEE--EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 2233 554433 22 1 35666666543211 122122334677777 665 45666666787 77764
No 128
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.082 Score=51.87 Aligned_cols=196 Identities=13% Similarity=0.134 Sum_probs=104.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC--CeeccccC---CccceeEEccC--CeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--TPVGKPLV---GVTASVEWAGN--EALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg--~~~~~~i~---~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+.|||||++||.+.. +| .|+|+|+.++ +.+. .+. +....++|+++ +.++++...+ ..|.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~ 82 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSS-DK----TIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYD----GKVL 82 (379)
T ss_dssp CEEEEEECSSSSEEEEEET-TS----CEEEEEEETTEEEEEE-EECCCSSCEEEEEECCGGGCSEEEEEETT----SCEE
T ss_pred cEEEEEEcCCCCEEEEEEC-CC----cEEEEecCCCcceeee-EecCCCCcEEEEEeCCCCCCCEEEEeccC----CEEE
Confidence 4777899999999998754 33 5889998743 3322 222 22345899877 6666665432 2466
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEEcCC--CcEEEEEecCcceeEEEEEeCCCCC--ceeEeeeccccee-EEEee-
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TAASH- 338 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~D--g~~l~i~~~~~~~~ev~~~d~~~~~--~~~~l~~~~~g~~-~~v~~- 338 (534)
.+++.++.......+.. .......+.++++ +++++....+ ..|.+.++.... ....+......+. ..+.+
T Consensus 83 iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecCC---CcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 66665442111222222 2233446789999 8887765443 356777776653 1222222222222 22444
Q ss_pred ------------eCCEEEEEEcCCCCCccEEEEEeCCCCCCc-eE--EecCCCCceeeeEEEeCC----EEEEEEeeCCe
Q 009441 339 ------------RGNHFFITRRSDELFNSELLACPVDNTSET-TV--LIPHRESVKLQDIQLFID----HLAVYEREGGL 399 (534)
Q Consensus 339 ------------~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~-~~--li~~~~~~~l~~~~~~~~----~lv~~~~~~g~ 399 (534)
++..|+..+. + +.|...++...... .. .+... ...+..+.+.++ .+++....+|.
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~-d----g~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGA-D----NLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp C----------CTTCEEEEEET-T----SCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred cccccccccCCCCCCEEEEEeC-C----CeEEEEEecCCCcceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 3455544443 2 23444444332211 11 22222 234778888754 67777777775
Q ss_pred eEEEEEECCC
Q 009441 400 QKITTYRLPA 409 (534)
Q Consensus 400 ~~l~~~~l~~ 409 (534)
|.++++..
T Consensus 233 --i~iwd~~~ 240 (379)
T 3jrp_A 233 --CIIWTQDN 240 (379)
T ss_dssp --EEEEEESS
T ss_pred --EEEEeCCC
Confidence 55566664
No 129
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.13 E-value=0.086 Score=52.99 Aligned_cols=197 Identities=9% Similarity=0.095 Sum_probs=109.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC-eecc--ccCCccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-PVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~-~~~~--~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.| ++++|+.+.. + ..|+++|+.++. .+.. ...+....++|+||+.++++...+ ..|+.+++
T Consensus 178 ~v~~~~~--~~~~l~~~~~-d----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~ 246 (401)
T 4aez_A 178 RVGCLSW--NRHVLSSGSR-S----GAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND----NVVQIWDA 246 (401)
T ss_dssp CEEEEEE--ETTEEEEEET-T----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEET
T ss_pred ceEEEEE--CCCEEEEEcC-C----CCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC----CeEEEccC
Confidence 3455566 6677776543 3 379999998543 3221 112223458999999555554332 35777787
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~t 347 (534)
.+.. ....+.. .......+.+++++..+++.........+++.++.++. ..........+. ..+++++..++..+
T Consensus 247 ~~~~--~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 247 RSSI--PKFTKTN-HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-RVNTVDAGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp TCSS--EEEEECC-CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-EEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred CCCC--ccEEecC-CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEEECCCCCeEEEEe
Confidence 6542 2222322 12223357899999888776643345678888987765 222222222222 23667777776655
Q ss_pred cCCCCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 348 RSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.. .++.|...++.+...... .+..... .+..+.+..+ .+++....+| .|.++++.+
T Consensus 323 g~---~dg~i~v~~~~~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~~~dg--~i~iw~~~~ 380 (401)
T 4aez_A 323 GF---PDNNLSIWSYSSSGLTKQVDIPAHDT-RVLYSALSPDGRILSTAASDE--NLKFWRVYD 380 (401)
T ss_dssp CT---TTCEEEEEEEETTEEEEEEEEECCSS-CCCEEEECTTSSEEEEECTTS--EEEEEECCC
T ss_pred ec---CCCcEEEEecCCccceeEEEecCCCC-CEEEEEECCCCCEEEEEeCCC--cEEEEECCC
Confidence 32 234566666544221111 2333323 4777888754 4566666677 466677764
No 130
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.13 E-value=0.097 Score=50.92 Aligned_cols=198 Identities=8% Similarity=-0.026 Sum_probs=107.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc--CCccceeEEccC---CeEEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL--VGVTASVEWAGN---EALVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i--~~~~~~~~Ws~D---g~l~Y~~~d~~~r~~~v~~ 265 (534)
.|..+.|||||+.++.+.+.. .+...|+|+|+.+++.... .. .+....++|+|+ |.++++...+ ..|..
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----g~i~i 94 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG----GNLHI 94 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT----SCEEE
T ss_pred ceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC----CeEEE
Confidence 477889999998877665431 1136899999999876432 11 222345899998 5555555322 35777
Q ss_pred eecCCCCCCceEeeeecCCceEEEE------EEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeeccc---ceeEE
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGL------QASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVV---GVDTA 335 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~------~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~~~---g~~~~ 335 (534)
+++.+... ....+.... .....+ .+++|+++|+....+ ..+.+.++..+. ....+..... .....
T Consensus 95 wd~~~~~~-~~~~~~~~~-~~v~~~~~~~~~~~s~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 95 WNLEAPEM-PVYSVKGHK-EIINAIDGIGGLGIGEGAPEIVTGSRD---GTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp ECTTSCSS-CSEEECCCS-SCEEEEEEESGGGCC-CCCEEEEEETT---SCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred EeCCCCCc-cEEEEEecc-cceEEEeeccccccCCCccEEEEEeCC---CeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 78766531 222333222 112223 357899988765433 356777877654 2333322111 01111
Q ss_pred ------EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC----CEEEEEEeeCCeeEEEEE
Q 009441 336 ------ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI----DHLAVYEREGGLQKITTY 405 (534)
Q Consensus 336 ------v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~----~~lv~~~~~~g~~~l~~~ 405 (534)
+++++..|+..+. ++.|...++..... ....... ..+..+.+.+ +..++....+|. |.++
T Consensus 170 ~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~-~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg~--i~i~ 239 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYD-----NGDIKLFDLRNMAL-RWETNIK--NGVCSLEFDRKDISMNKLVATSLEGK--FHVF 239 (357)
T ss_dssp EEEECCCC-CCCEEEEEET-----TSEEEEEETTTTEE-EEEEECS--SCEEEEEESCSSSSCCEEEEEESTTE--EEEE
T ss_pred EEEEeccCCCCCEEEEEcc-----CCeEEEEECccCce-eeecCCC--CceEEEEcCCCCCCCCEEEEECCCCe--EEEE
Confidence 2355555554433 24677777765332 1233322 2477788763 455556666674 5566
Q ss_pred ECCC
Q 009441 406 RLPA 409 (534)
Q Consensus 406 ~l~~ 409 (534)
++..
T Consensus 240 d~~~ 243 (357)
T 3i2n_A 240 DMRT 243 (357)
T ss_dssp EEEE
T ss_pred eCcC
Confidence 6653
No 131
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.12 E-value=0.11 Score=50.61 Aligned_cols=114 Identities=11% Similarity=0.086 Sum_probs=71.8
Q ss_pred EEEEEEECCC----CCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEcc-CCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPD----NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAG-NEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPD----G~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~-Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.+..+.|||| |++||.+.. +| .|+|+|+.+++.+... ..+....+.|+| ++.++++...+ ..|+
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~-dg----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d----g~i~ 141 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGS-RG----IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD----HALR 141 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEET-TC----EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT----SCEE
T ss_pred cEEEEEeccCCCCCCCEEEEecC-CC----EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC----CeEE
Confidence 3677789999 667776644 33 7999999999876531 122234599999 66666665432 3577
Q ss_pred EeecCCCCCCceEeee--ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCC
Q 009441 265 LHKLEADQSNDICLYH--EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~--e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~ 319 (534)
.+++.++. ....+. .........+.+++|+++|+....+ ..|.+.++..+
T Consensus 142 iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~ 193 (366)
T 3k26_A 142 LWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD---HSLKLWRINSK 193 (366)
T ss_dssp EEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSEEEEEETT---SCEEEEESCSH
T ss_pred EEEeecCe--EEEEecccccccCceeEEEECCCCCEEEEecCC---CCEEEEECCCC
Confidence 77876542 223331 1223345568899999998765432 35667777653
No 132
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.11 E-value=0.13 Score=50.94 Aligned_cols=114 Identities=18% Similarity=0.118 Sum_probs=69.3
Q ss_pred EEEEEEECC-CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC---eEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE---ALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SP-DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg---~l~Y~~~d~~~r~~~v~~~ 266 (534)
.+..+.|+| ++++|+.+.. +| .|+++|+.+++.+.. ........+.|++.+ .++++...+ ..|+.+
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~-d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~ 171 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSF-DK----TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG----PKVQLC 171 (408)
T ss_dssp CEEEEEECTTCTTCEEEEET-TS----EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS----SSEEEE
T ss_pred cEEEEEEccCCCcEEEEEeC-CC----eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC----CeEEEE
Confidence 577889999 6667666533 33 699999999876543 223333458888754 365655432 357777
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCC
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~ 319 (534)
++.++. ....+.. .......+.++++++++++..... ..|.+.++...
T Consensus 172 d~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~ll~~~~~d--g~i~i~d~~~~ 219 (408)
T 4a11_B 172 DLKSGS--CSHILQG-HRQEILAVSWSPRYDYILATASAD--SRVKLWDVRRA 219 (408)
T ss_dssp ESSSSC--CCEEECC-CCSCEEEEEECSSCTTEEEEEETT--SCEEEEETTCS
T ss_pred eCCCcc--eeeeecC-CCCcEEEEEECCCCCcEEEEEcCC--CcEEEEECCCC
Confidence 876553 2223332 223344678999999766554332 34666676553
No 133
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.11 E-value=0.054 Score=57.37 Aligned_cols=197 Identities=8% Similarity=0.002 Sum_probs=107.3
Q ss_pred EEEEEECC--CCCEEEEEEcCCCCeEEEEEEEECCCC--------Ceecc--ccCCccceeEEccCCeEEEEEECCCCCC
Q 009441 193 VGCFQVSP--DNKLVAYAEDTKGDEIYTVYVIDIETG--------TPVGK--PLVGVTASVEWAGNEALVYITMDEILRP 260 (534)
Q Consensus 193 l~~~~~SP--DG~~LA~~~d~~G~E~~~l~v~dl~tg--------~~~~~--~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~ 260 (534)
|..+.||| ||++||.+.. +| +|+|+|+.+| +.+.. ........++|+|||.++++...+....
T Consensus 67 v~~~~~sp~~~~~~l~s~~~-dg----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 141 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDE-SG----KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF 141 (615)
T ss_dssp EEEEEECSSTTCCEEEEEET-TS----EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCS
T ss_pred EEEEEECcCCCCCEEEEecC-CC----EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCc
Confidence 77889999 9999998755 33 6999999766 22221 1122234599999994444443332233
Q ss_pred ceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc---cee-EEE
Q 009441 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV---GVD-TAA 336 (534)
Q Consensus 261 ~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~---g~~-~~v 336 (534)
..|+.++.+. ....+.. .......+.++++++++++..... ..+.+.++........+..... .+. ..+
T Consensus 142 ~~v~~~d~~~----~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d--~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 142 GVFISWDSGN----SLGEVSG-HSQRINACHLKQSRPMRSMTVGDD--GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF 214 (615)
T ss_dssp EEEEETTTCC----EEEECCS-CSSCEEEEEECSSSSCEEEEEETT--TEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred cEEEEEECCC----cceeeec-CCccEEEEEECCCCCcEEEEEeCC--CcEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence 5677777432 1222222 223344578999999655554332 3566667665431222222222 222 235
Q ss_pred eee-CCEEEEEEcCCCCCccEEEEEeCCCCCCceEEe-cC--CCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 337 SHR-GNHFFITRRSDELFNSELLACPVDNTSETTVLI-PH--RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 337 ~~~-g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li-~~--~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.++ +..|+..+.. +.|...++.+.... ..+ .. .....+..+.+..+.+++....+| .|.++++..
T Consensus 215 ~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~--~i~~wd~~~ 283 (615)
T 1pgu_A 215 SPDSGEFVITVGSD-----RKISCFDGKSGEFL-KYIEDDQEPVQGGIFALSWLDSQKFATVGADA--TIRVWDVTT 283 (615)
T ss_dssp CSTTCCEEEEEETT-----CCEEEEETTTCCEE-EECCBTTBCCCSCEEEEEESSSSEEEEEETTS--EEEEEETTT
T ss_pred CCCCCCEEEEEeCC-----CeEEEEECCCCCEe-EEecccccccCCceEEEEEcCCCEEEEEcCCC--cEEEEECCC
Confidence 666 6655554432 35666776543321 133 20 222347777775444555555566 466677764
No 134
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.016 Score=57.18 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=67.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC----CccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV----GVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~----~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.+..+.+||||++||.+.. + ..|+|+|+.+++.+...+. +....++|+|||.++.+..+. .|..++
T Consensus 172 ~i~~~~~~pdg~~lasg~~-d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-----~v~iwd 241 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSP-D----GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-----TVVCFD 241 (343)
T ss_dssp CCCEEEECTTSCEEEEECT-T----SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-----BEEEEE
T ss_pred ceEEEEECCCCCEEEEEcC-C----CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-----eEEEEE
Confidence 3677899999999998643 2 3799999999986522222 223569999999555555432 677778
Q ss_pred cCCCCCCceEeeee-cCCceEE---EEEEcCCCcEEEEEecCcceeEEEEEe
Q 009441 268 LEADQSNDICLYHE-KDDIYSL---GLQASESKKFLFIASESKITRFVFYLD 315 (534)
Q Consensus 268 lgt~~~~d~lv~~e-~d~~~~v---~~~~S~Dg~~l~i~~~~~~~~ev~~~d 315 (534)
+.+... ...+.. ......+ .+.++++|++|+..+.....-.+|-++
T Consensus 242 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 242 LRKDVG--TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp TTSSTT--CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cCCCCc--ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 866532 111110 0111222 378999999998765533344445443
No 135
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.08 E-value=0.27 Score=48.57 Aligned_cols=196 Identities=14% Similarity=0.088 Sum_probs=105.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC-CccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~-~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.|||||++||-+.. + .+++|||+.+++.... ... .....++|+|||.++.+... ...+..+.+.
T Consensus 66 ~V~~~~~s~d~~~l~s~s~-D----g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~----d~~i~v~~~~ 136 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQ-D----GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL----DNKCSVYPLT 136 (354)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST----TSEEEEEECC
T ss_pred eEEEEEECCCCCEEEEEeC-C----CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC----CCCEEEEEEe
Confidence 4677899999999886543 3 3799999998876432 122 12345899999955455422 1244445543
Q ss_pred CCCC----CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEee--eCCE
Q 009441 270 ADQS----NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH--RGNH 342 (534)
Q Consensus 270 t~~~----~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~--~g~~ 342 (534)
.... .....+.. .......+.++++++.|+..+.+ ..|.+.|+.++.....+......+. ..+.+ .|..
T Consensus 137 ~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~s~D---~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAM-HTNYLSACSFTNSDMQILTASGD---GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCTTCCSGGGCEEEEE-CSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred ccccccccccceeeec-cCCcEEEEEEeCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 2211 11111221 22334457889999987754433 3466778776541222322222221 12333 2344
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
|+.-+. ++.+...|+.+..... .+..... .+..+.+.+ +.+++....++. ++++++..
T Consensus 213 l~sgs~-----Dg~v~~wd~~~~~~~~-~~~~h~~-~v~~v~~~p~~~~l~s~s~D~~--v~lwd~~~ 271 (354)
T 2pbi_B 213 FVSGGC-----DKKAMVWDMRSGQCVQ-AFETHES-DVNSVRYYPSGDAFASGSDDAT--CRLYDLRA 271 (354)
T ss_dssp EEEEET-----TSCEEEEETTTCCEEE-EECCCSS-CEEEEEECTTSSEEEEEETTSC--EEEEETTT
T ss_pred EEEEeC-----CCeEEEEECCCCcEEE-EecCCCC-CeEEEEEeCCCCEEEEEeCCCe--EEEEECCC
Confidence 443332 2456667765532211 2332223 477888765 356666666774 66668764
No 136
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.06 E-value=0.25 Score=48.47 Aligned_cols=197 Identities=13% Similarity=0.082 Sum_probs=100.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec-cccC---CccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~-~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
.|..+.|||||++||-+... | +++|+|+.+++... ..+. +....++|+|||.++.+...+ ..|+.++
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D-~----~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D----~~v~iwd 133 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFD-A----TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD----KSVWVWE 133 (345)
T ss_dssp CEEEEEECTTSSEEEEEETT-S----CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEE
T ss_pred cEEEEEECCCCCEEEEEECC-C----cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC----CeEEEEE
Confidence 47788999999999976542 3 58889988775321 1222 223459999999555555332 2566667
Q ss_pred cCCCCCCceEe--eeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeE---eeeccccee-EEEeeeCC
Q 009441 268 LEADQSNDICL--YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPRVVGVD-TAASHRGN 341 (534)
Q Consensus 268 lgt~~~~d~lv--~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~---l~~~~~g~~-~~v~~~g~ 341 (534)
+.+... ...+ +.. .......+.++||+++|+..+.+. .|.+.+..... +.. +......+. ..++++|.
T Consensus 134 ~~~~~~-~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~---~i~~w~~~~~~-~~~~~~~~~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 134 VDEEDE-YECVSVLNS-HTQDVKHVVWHPSQELLASASYDD---TVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSGQ 207 (345)
T ss_dssp ECTTSC-EEEEEEECC-CCSCEEEEEECSSSSCEEEEETTS---CEEEEEEETTE-EEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCCCC-eEEEEEecC-cCCCeEEEEECCCCCEEEEEeCCC---cEEEEEecCCC-EEEEEEecCCCCceEEEEECCCCC
Confidence 655421 1222 221 122334578999999877654332 23444443332 221 211111121 23567776
Q ss_pred EEEEEEcCCCCCccEEEEEeCCCCC--------CceE----EecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECC
Q 009441 342 HFFITRRSDELFNSELLACPVDNTS--------ETTV----LIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 342 ~lyi~tn~~~~~~~~L~~~~~~~~~--------~~~~----li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 408 (534)
.|+..+.. ..-+|+........ ...| .+.......+..+.+.. ...++....++.- ++++.+
T Consensus 208 ~l~s~s~D---~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i--~vw~~~ 282 (345)
T 3fm0_A 208 RLASCSDD---RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAI--RVFQED 282 (345)
T ss_dssp EEEEEETT---SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCE--EEEEEC
T ss_pred EEEEEeCC---CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeE--EEEEeC
Confidence 66544432 23455554322110 1122 11111223467777764 3455555556644 444544
No 137
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.06 E-value=0.03 Score=65.43 Aligned_cols=195 Identities=13% Similarity=0.147 Sum_probs=109.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.+||||+++|.+... | .++++|+.+++.+... -.+....++|+|||.++.+... ...|..+++.
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~-g----~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~----dg~i~vwd~~ 1033 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDED-G----AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE----DSVIQVWNWQ 1033 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETT-S----CCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS----SSBEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEcCC-C----CEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC----CCEEEEEECC
Confidence 36778999999999998653 3 5899999998765421 1122345999999944444422 2357777876
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
++. .+...........+.++++++.+... . ...+++.++.++.....+......+. ..+++++..++..+.
T Consensus 1034 ~~~----~~~~~~~~~~v~~~~~~~~~~l~~~~-~---dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~ 1105 (1249)
T 3sfz_A 1034 TGD----YVFLQAHQETVKDFRLLQDSRLLSWS-F---DGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSA 1105 (1249)
T ss_dssp TTE----EECCBCCSSCEEEEEECSSSEEEEEE-S---SSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECC
T ss_pred CCc----eEEEecCCCcEEEEEEcCCCcEEEEE-C---CCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcC
Confidence 542 22211222334457788988754332 2 23577888877652222322222222 336676666554333
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCCc
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEP 413 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~~ 413 (534)
+ +.+...++.+.... ..+..... .+..+.+..+ .+++....+|. |+++++.+ |+.
T Consensus 1106 -d----~~v~iwd~~~~~~~-~~l~~h~~-~v~~~~~s~dg~~lat~~~dg~--i~vwd~~~-~~~ 1161 (1249)
T 3sfz_A 1106 -D----KTAKIWSFDLLSPL-HELKGHNG-CVRCSAFSLDGILLATGDDNGE--IRIWNVSD-GQL 1161 (1249)
T ss_dssp -S----SCCCEECSSSSSCS-BCCCCCSS-CEEEEEECSSSSEEEEEETTSC--CCEEESSS-SCC
T ss_pred -C----CcEEEEECCCccee-eeeccCCC-cEEEEEECCCCCEEEEEeCCCE--EEEEECCC-Cce
Confidence 2 23444454432211 12222222 4777887654 46666666774 66668775 553
No 138
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.05 E-value=0.27 Score=48.10 Aligned_cols=193 Identities=12% Similarity=0.110 Sum_probs=105.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCee---cccc---CCccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV---GKPL---VGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~---~~~i---~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
+..+.+||||++||.+... ..++++|+.+++.. ...+ .+....+.|++++.++-...| ..|..+
T Consensus 100 v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d-----~~i~~w 169 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD-----TTCALW 169 (340)
T ss_dssp EEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETT-----SCEEEE
T ss_pred EEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECC-----CcEEEE
Confidence 6678999999999986542 37999999876421 1112 122345788888865433322 357777
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEE
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFI 345 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi 345 (534)
++.++. ....+.. .......+.+++|+++++..+.+ ..|.+.|+.++.....+......+. ..+.+++..|+.
T Consensus 170 d~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d---~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 243 (340)
T 1got_B 170 DIETGQ--QTTTFTG-HTGDVMSLSLAPDTRLFVSGACD---ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp ETTTTE--EEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ECCCCc--EEEEEcC-CCCceEEEEECCCCCEEEEEeCC---CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE
Confidence 776542 2223332 22234467899999987654432 3466777766541222222222222 235666666554
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEEecCC-CCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.+. + +.|...++..... ...+... ....+..+.+.++ .+++....+| .|.+++...
T Consensus 244 ~s~-d----~~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~--~i~vwd~~~ 301 (340)
T 1got_B 244 GSD-D----ATCRLFDLRADQE-LMTYSHDNIICGITSVSFSKSGRLLLAGYDDF--NCNVWDALK 301 (340)
T ss_dssp EET-T----SCEEEEETTTTEE-EEEECCTTCCSCEEEEEECTTSSEEEEEETTS--EEEEEETTT
T ss_pred EcC-C----CcEEEEECCCCcE-EEEEccCCcccceEEEEECCCCCEEEEECCCC--eEEEEEccc
Confidence 443 2 3455566654221 1122222 1224677777653 5666666676 466777764
No 139
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.05 E-value=0.1 Score=60.85 Aligned_cols=143 Identities=14% Similarity=0.125 Sum_probs=83.5
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.|||||++||.+.. +| +|+|+|+.+|+.+.. +. +....++|+|||.++.+...+ ..|..+++
T Consensus 617 ~v~~~~~s~~~~~l~s~~~-d~----~i~vw~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~d----~~v~vwd~ 686 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGA-DK----TLQVFKAETGEKLLD-IKAHEDEVLCCAFSSDDSYIATCSAD----KKVKIWDS 686 (1249)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----CEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeC-CC----eEEEEECCCCCEEEE-eccCCCCEEEEEEecCCCEEEEEeCC----CeEEEEEC
Confidence 4778899999999987643 33 699999999987642 22 223459999999555555322 36888888
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~t 347 (534)
.++. -...+... ......+.+++++...++.+.+. ...|.+.++.++.....+......+. ..+++++..|+..+
T Consensus 687 ~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~~l~sg~~-d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 687 ATGK--LVHTYDEH-SEQVNCCHFTNKSNHLLLATGSN-DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp TTCC--EEEEEECC-SSCEEEEEECSSSSCCEEEEEET-TSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred CCCc--eEEEEcCC-CCcEEEEEEecCCCceEEEEEeC-CCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE
Confidence 7652 23333332 22334577888655433333221 23467777776541222322222222 23667777666555
Q ss_pred c
Q 009441 348 R 348 (534)
Q Consensus 348 n 348 (534)
.
T Consensus 763 ~ 763 (1249)
T 3sfz_A 763 A 763 (1249)
T ss_dssp S
T ss_pred C
Confidence 4
No 140
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.02 E-value=0.33 Score=48.98 Aligned_cols=189 Identities=13% Similarity=0.091 Sum_probs=103.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.++|||++|+-+.. + .+|+++|+.+|+.+.. +. .....+.|++||.++.+...+ ..|..+++
T Consensus 194 ~V~~v~~~p~~~~l~s~s~-D----~~i~~wd~~~~~~~~~-~~~h~~~v~~~~~~~~g~~l~s~s~D----~~v~vwd~ 263 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASR-D----KTIKMWEVQTGYCVKT-FTGHREWVRMVRPNQDGTLIASCSND----QTVRVWVV 263 (410)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTCCEEEE-EECCSSCEEEEEECTTSSEEEEEETT----SCEEEEET
T ss_pred CEEEEEEeCCCCEEEEEeC-C----CeEEEEECCCCcEEEE-EeCCCccEEEEEECCCCCEEEEEcCC----CeEEEEEC
Confidence 4778899999999876543 2 3799999999986542 22 123458899999666665432 25666677
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCC--------------------CcEEEEEecCcceeEEEEEeCCCCCceeEeeec
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASES--------------------KKFLFIASESKITRFVFYLDVSKPEELRVLTPR 328 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~D--------------------g~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~ 328 (534)
.+.. -...+.. .......+.++|+ |.+|+..+. ...|.+.|+.++.....+...
T Consensus 264 ~~~~--~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~---D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 264 ATKE--CKAELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR---DKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp TTCC--EEEEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET---TSEEEEEETTTTEEEEEEECC
T ss_pred CCCc--eeeEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC---CCeEEEEECCCCceEEEEECC
Confidence 6542 1222222 1222334667776 455554332 235777788765422223222
Q ss_pred cccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEE
Q 009441 329 VVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKIT 403 (534)
Q Consensus 329 ~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~ 403 (534)
...+. ..++++|..|+..+. .+.|...++.+..... .+....+ .+..+.+.++ .+++....+|.-+++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~-----D~~i~vwd~~~~~~~~-~~~~h~~-~v~~l~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCAD-----DKTLRVWDYKNKRCMK-TLNAHEH-FVTSLDFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEET-----TTEEEEECCTTSCCCE-EEECCSS-CEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCceEE-EEcCCCC-cEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 22222 225555655543332 2456666665433211 2332323 4777877654 456667777754443
No 141
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.02 E-value=0.19 Score=49.14 Aligned_cols=236 Identities=11% Similarity=0.055 Sum_probs=120.0
Q ss_pred CCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEe
Q 009441 201 DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICL 278 (534)
Q Consensus 201 DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv 278 (534)
++++|..+...+| .|.++|.++++.+.. ++. ....+++++||.+ |++.. ....|+.+++.+..... .
T Consensus 52 ~~~~lyv~~~~~~----~v~viD~~t~~~~~~-i~~~~~p~~i~~~~~g~l-yv~~~---~~~~v~~iD~~t~~~~~--~ 120 (328)
T 3dsm_A 52 RDGIGWIVVNNSH----VIFAIDINTFKEVGR-ITGFTSPRYIHFLSDEKA-YVTQI---WDYRIFIINPKTYEITG--Y 120 (328)
T ss_dssp ETTEEEEEEGGGT----EEEEEETTTCCEEEE-EECCSSEEEEEEEETTEE-EEEEB---SCSEEEEEETTTTEEEE--E
T ss_pred ECCEEEEEEcCCC----EEEEEECcccEEEEE-cCCCCCCcEEEEeCCCeE-EEEEC---CCCeEEEEECCCCeEEE--E
Confidence 4566555554333 699999999987652 332 2345888888854 55531 13478888876542111 1
Q ss_pred eeecC-C---ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcCCC--
Q 009441 279 YHEKD-D---IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDE-- 351 (534)
Q Consensus 279 ~~e~d-~---~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~~~-- 351 (534)
+.-.. . ..-..+.+ +++.|++... ...+.|+++|+++.+ .....+..... ...++++ +.+|+.++...
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~-~~~~~v~viD~~t~~-~~~~i~~g~~p~~i~~~~d-G~l~v~~~~~~~~ 195 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCW-SYQNRILKIDTETDK-VVDELTIGIQPTSLVMDKY-NKMWTITDGGYEG 195 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEEC-TTCCEEEEEETTTTE-EEEEEECSSCBCCCEECTT-SEEEEEBCCBCTT
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcC-CCCCEEEEEECCCCe-EEEEEEcCCCccceEEcCC-CCEEEEECCCccC
Confidence 11111 0 01112333 5666666432 124579999988764 22212211111 1224443 56877776310
Q ss_pred C----CccEEEEEeCCCCCCce-EEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceee
Q 009441 352 L----FNSELLACPVDNTSETT-VLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVE 424 (534)
Q Consensus 352 ~----~~~~L~~~~~~~~~~~~-~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~ 424 (534)
. ....|.++|.++..... +.++.. ....++.+.+ +.||+.. + .|++++..+ ++... ...+.
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g--~~p~~la~~~d~~~lyv~~---~--~v~~~d~~t-~~~~~----~~~~~ 263 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLG--DWPSEVQLNGTRDTLYWIN---N--DIWRMPVEA-DRVPV----RPFLE 263 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTT--CCCEEEEECTTSCEEEEES---S--SEEEEETTC-SSCCS----SCSBC
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCC--CCceeEEEecCCCEEEEEc---c--EEEEEECCC-Cceee----eeeec
Confidence 0 13689999976543211 122222 2356777764 4666543 2 688999875 44211 00111
Q ss_pred ecCceeeEeCCCCccCccEEEEEe-ccCCCCCeEEEEECCCCcE
Q 009441 425 FIDPVYSIDPSESVFSSRILRFHY-SSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 425 lp~~~~~i~~~~~~~~~~~l~~~~-sS~~~P~~~y~~d~~~~~~ 467 (534)
.......++..+.++..++++- .++.....++.||.. |+.
T Consensus 264 --~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 264 --FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp --CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred --CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 1000111122344455677663 344567889999987 653
No 142
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.01 E-value=0.16 Score=48.34 Aligned_cols=192 Identities=9% Similarity=0.047 Sum_probs=106.7
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC-cc-ceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VT-ASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~-~~-~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.++.++||| .|..+....| ...|+++|+++|+.+.. .++. .+ .++++. | .+|.+. .....++.++..
T Consensus 24 ~Gl~~~~dg-~Lyvstg~~~--~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t----~~~~~v~viD~~ 94 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGLYG--RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVV----WLKNIGFIYDRR 94 (266)
T ss_dssp EEEEECSTT-EEEEEECSTT--TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE----TTCSEEEEEETT
T ss_pred ccEEEeCCC-eEEEECCCCC--CCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEE----ecCCEEEEEECC
Confidence 456889996 3333322222 25799999999998763 2333 23 235554 5 666654 234578888876
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce----eEEEeeeCCEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV----DTAASHRGNHFFI 345 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~----~~~v~~~g~~lyi 345 (534)
+...-..+-+. ...+ ..+++||++++++ + .++.|+++|.++.+..+.+.-...+. -..++..++++|+
T Consensus 95 t~~v~~~i~~g-~~~g----~glt~Dg~~l~vs-~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 95 TLSNIKNFTHQ-MKDG----WGLATDGKILYGS-D--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWA 166 (266)
T ss_dssp TTEEEEEEECC-SSSC----CEEEECSSSEEEE-C--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CCcEEEEEECC-CCCe----EEEEECCCEEEEE-C--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEE
Confidence 54211111112 0122 3467899998864 3 36789999988755122222111111 1122223567774
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEE-ecC----------CCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECC
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVL-IPH----------RESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~l-i~~----------~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~ 408 (534)
.+. . ...|.++|.++.....++ ++. .....+.++.+.+ +.+++..... ++|+++++.
T Consensus 167 -n~~-~--~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~--~~v~~i~l~ 236 (266)
T 2iwa_A 167 -NIW-Q--TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW--PKLFEIKLH 236 (266)
T ss_dssp -EET-T--SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC--SEEEEEEEE
T ss_pred -ecC-C--CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC--CeEEEEEEe
Confidence 343 2 248999999876544442 220 1122478888874 4777776533 467777765
No 143
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.96 E-value=0.08 Score=53.15 Aligned_cols=108 Identities=7% Similarity=-0.167 Sum_probs=63.2
Q ss_pred EEEEcCCCCeEE-EEEEEECCCCCeeccccC-CccceeEEccCCeEEEEEEC---CC---CCCceEEEeecCCCCCCceE
Q 009441 206 AYAEDTKGDEIY-TVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMD---EI---LRPDKAWLHKLEADQSNDIC 277 (534)
Q Consensus 206 A~~~d~~G~E~~-~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg~l~Y~~~d---~~---~r~~~v~~~~lgt~~~~d~l 277 (534)
+|..+.+++.-. ++.|+|+++++.+.. ++ +...++..+|||+.+|+... .. .+...|..+++.+......+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~-i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGH-SLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEE-EEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEE-EeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 677776554111 899999999998763 32 22236999999955556541 11 12356888887765322222
Q ss_pred eee-------ecCCceEEEEEEcCCCcEEEEEecCcceeEEEE--EeCCC
Q 009441 278 LYH-------EKDDIYSLGLQASESKKFLFIASESKITRFVFY--LDVSK 318 (534)
Q Consensus 278 v~~-------e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~--~d~~~ 318 (534)
-.. ..+|. .+.+||||+++++.... ..+.+.+ +|+.+
T Consensus 113 ~v~~~~~~~~g~~P~---~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t 158 (368)
T 1mda_H 113 ELPDAPRFSVGPRVH---IIGNCASSACLLFFLFG-SSAAAGLSVPGASD 158 (368)
T ss_dssp EETTSCSCCBSCCTT---SEEECTTSSCEEEEECS-SSCEEEEEETTTEE
T ss_pred ECCCccccccCCCcc---eEEEcCCCCEEEEEccC-CCCeEEEEEEchhh
Confidence 111 01232 35789999999886422 2344555 66543
No 144
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.95 E-value=0.18 Score=48.06 Aligned_cols=112 Identities=7% Similarity=-0.028 Sum_probs=59.7
Q ss_pred EEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCC
Q 009441 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (534)
Q Consensus 289 ~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~ 367 (534)
.+.+++++..++..+.......+.+.+..... ..........+. ..+.+.++.+++.+.. .++.|...++.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~sg~---~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 201 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHGF---AQNQLVIWKYPTMAK 276 (318)
T ss_dssp EEEECTTSTTEEEEEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEETTTTEEEEEECT---TTCCEEEEETTTCCE
T ss_pred EEEecCCCCcEEEEEecCCCCEEEEEeccccc-ccccccceeeeeeeeecccccceEEEEEc---CCCEEEEEECCCCcE
Confidence 45667777666554444334456666666543 221222212222 2356777777776642 335677777765432
Q ss_pred ceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECC
Q 009441 368 TTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 368 ~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 408 (534)
. ..+..+.+ .|..+.+.++ .+++....+|.- ++.++.
T Consensus 277 ~-~~l~gH~~-~V~~l~~spdg~~l~S~s~D~~v--~iWd~~ 314 (318)
T 4ggc_A 277 V-AELKGHTS-RVLSLTMSPDGATVASAAADETL--RLWRCF 314 (318)
T ss_dssp E-EEECCCSS-CEEEEEECTTSSCEEEEETTTEE--EEECCS
T ss_pred E-EEEcCCCC-CEEEEEEcCCCCEEEEEecCCeE--EEEECC
Confidence 1 12332333 4888888754 566777778854 444554
No 145
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.94 E-value=0.23 Score=48.23 Aligned_cols=153 Identities=9% Similarity=0.023 Sum_probs=85.5
Q ss_pred EEEEEEECCC---CCEEEEEEcCCCCeEEEEEEEECCCCCeecc--c-----cCCccceeEEccC----CeEEEEEECCC
Q 009441 192 SVGCFQVSPD---NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--P-----LVGVTASVEWAGN----EALVYITMDEI 257 (534)
Q Consensus 192 ~l~~~~~SPD---G~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~--~-----i~~~~~~~~Ws~D----g~l~Y~~~d~~ 257 (534)
.|..+++||+ |..+.++...+| .|+|+|+.+++.+.. . .......++|+++ |.++++...+
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d- 94 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSN----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR- 94 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETT----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-
T ss_pred ceEEEEEecccCCCCceEEEECCCC----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-
Confidence 5777899985 664444444333 699999998765431 0 1122345899999 5566665432
Q ss_pred CCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcC-CCcEEEEEecCcceeEEEEEeCCCCCceeEe---eeccccee
Q 009441 258 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVL---TPRVVGVD 333 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~-Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l---~~~~~g~~ 333 (534)
..|..+++.+.. ....+.. .......+.+++ ++++|+....+ ..|++.++..+.....+ ......+.
T Consensus 95 ---g~i~v~d~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 95 ---GIIRIINPITMQ--CIKHYVG-HGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQTDTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp ---CEEEEECTTTCC--EEEEEES-CCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTTTEEEEEECSTTSCSSCEE
T ss_pred ---CEEEEEEchhce--EeeeecC-CCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEeecCeEEEEecccccccCcee
Confidence 367788877652 2223332 223344578999 88887665432 35777788765412222 11211222
Q ss_pred -EEEeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 334 -TAASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 334 -~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
..+++++..|+..+.. +.|...++.
T Consensus 166 ~~~~~~~~~~l~~~~~d-----g~i~i~d~~ 191 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMD-----HSLKLWRIN 191 (366)
T ss_dssp EEEECTTSSEEEEEETT-----SCEEEEESC
T ss_pred EEEECCCCCEEEEecCC-----CCEEEEECC
Confidence 2255666666554432 345555654
No 146
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.94 E-value=0.068 Score=54.75 Aligned_cols=74 Identities=18% Similarity=0.088 Sum_probs=47.4
Q ss_pred EEEECCCCCEEEEEEcC-----CCCeEEEEEEEECCCCCeecc-ccC-------C-ccceeEEccCCeEEEEEECCCCCC
Q 009441 195 CFQVSPDNKLVAYAEDT-----KGDEIYTVYVIDIETGTPVGK-PLV-------G-VTASVEWAGNEALVYITMDEILRP 260 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~-----~G~E~~~l~v~dl~tg~~~~~-~i~-------~-~~~~~~Ws~Dg~l~Y~~~d~~~r~ 260 (534)
.+.+||||++|..+-.. .|...-.|.++|+.+++.+.. .++ + .-.++.++|||+.+|+.+.. ..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~--~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS--PA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS--SS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC--CC
Confidence 57899999998877531 233446899999999987653 232 1 12468999999666665421 12
Q ss_pred ceEEEeecCC
Q 009441 261 DKAWLHKLEA 270 (534)
Q Consensus 261 ~~v~~~~lgt 270 (534)
..|...++.+
T Consensus 200 ~~VsVID~~t 209 (426)
T 3c75_H 200 PAVGVVDLEG 209 (426)
T ss_dssp CEEEEEETTT
T ss_pred CeEEEEECCC
Confidence 3455555443
No 147
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.93 E-value=0.12 Score=52.33 Aligned_cols=113 Identities=14% Similarity=0.182 Sum_probs=70.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC-CCeecc------cc---CCccceeEEccCC-eEEEEEECCCCCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK------PL---VGVTASVEWAGNE-ALVYITMDEILRP 260 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t-g~~~~~------~i---~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~ 260 (534)
.|..+.|||||++||.+ + + ..|+|+|+.+ ++.+.. .+ ......++|+|++ .++++...+
T Consensus 179 ~v~~~~~~~~~~~l~s~-~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---- 248 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-D-D----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK---- 248 (447)
T ss_dssp CCCEEEECTTSSEEEEE-C-S----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT----
T ss_pred ceEEEEEcCCCCEEEEe-C-C----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC----
Confidence 46678999999999976 3 3 3799999984 333220 11 2223459999998 777776533
Q ss_pred ceEEEeecCCCCC--CceEeeeecCC-----------ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC
Q 009441 261 DKAWLHKLEADQS--NDICLYHEKDD-----------IYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (534)
Q Consensus 261 ~~v~~~~lgt~~~--~d~lv~~e~d~-----------~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~ 318 (534)
..|..+++.+... .....+..... .....+.+++||++|+.... ..|.+.++..
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~iwd~~~ 315 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVKVWDLNM 315 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEEEEETTC
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC----CeEEEEeCCC
Confidence 2577777765431 11234443221 13446889999999875433 5677778765
No 148
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.92 E-value=0.47 Score=49.72 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=102.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-c-cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~-i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.+||||++||.+... | .++++|.. ++.+.. . -......++|+|||.++.+...+ ..|..++..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~d-g----~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d----~~v~~~~~~ 415 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDD-K----TVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDD----KTVKLWNRN 415 (577)
T ss_dssp CEEEEEECTTSSEEEEEETT-S----EEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETT----SEEEEECTT
T ss_pred CEEEEEECCCCCEEEEEeCC-C----EEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCC----CEEEEEeCC
Confidence 46678999999999987542 3 68899964 554432 1 11223458999999444443322 256666643
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
.. -...+.. .......+.++||+++|+....+ ..+.+.+..... ...+......+. ..+++++..|+..+.
T Consensus 416 ~~---~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d---~~v~~w~~~~~~-~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 416 GQ---LLQTLTG-HSSSVWGVAFSPDDQTIASASDD---KTVKLWNRNGQL-LQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp CC---EEEEEEC-CSSCEEEEEECTTSSEEEEEETT---SEEEEEETTSCE-EEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred CC---EEEEecC-CCCCeEEEEECCCCCEEEEEcCC---CEEEEEECCCCE-EEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 21 1112222 22233457899999998765433 245666654422 333333322222 236676665554333
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
+ +.|...+... .. ...+..... .+..+.+.++ .+++....+|. |++++.+ |+
T Consensus 488 -d----~~i~iw~~~~-~~-~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg~--v~lwd~~--~~ 540 (577)
T 2ymu_A 488 -D----KTVKLWNRNG-QL-LQTLTGHSS-SVRGVAFSPDGQTIASASDDKT--VKLWNRN--GQ 540 (577)
T ss_dssp -T----SEEEEEETTS-CE-EEEEECCSS-CEEEEEECTTSSCEEEEETTSE--EEEECTT--SC
T ss_pred -C----CEEEEEcCCC-CE-EEEEeCCCC-CEEEEEEcCCCCEEEEEECcCE--EEEEeCC--CC
Confidence 1 3444445432 11 112322222 4777887653 55666667774 6666765 55
No 149
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.92 E-value=0.36 Score=47.24 Aligned_cols=192 Identities=11% Similarity=0.051 Sum_probs=98.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.+||||++|+-+.. + .+|+++|+.+|+.+... -.+....++|+|||..+.+...+ ..|..+++.
T Consensus 78 ~V~~~~~~~~~~~l~s~s~-D----~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d----~~i~~wd~~ 148 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSW-D----KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE----REIKLWNIL 148 (343)
T ss_dssp CEEEEEECSSTTEEEEEET-T----SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT----SCEEEEESS
T ss_pred ceEEEEECCCCCEEEEEcC-C----CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC----CEEEEEecc
Confidence 4677899999999885433 2 37999999999865421 12223459999999544554322 246666654
Q ss_pred CCCCCceEeeee--cCCceEEEEEEcCCC----------cEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEE
Q 009441 270 ADQSNDICLYHE--KDDIYSLGLQASESK----------KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAA 336 (534)
Q Consensus 270 t~~~~d~lv~~e--~d~~~~v~~~~S~Dg----------~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v 336 (534)
.. ......+ ........+.+++++ .+++..+.+ ..|.+.+... .....+......+. ..+
T Consensus 149 ~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~-~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 149 GE---CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD---GRLKVWNTNF-QIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp SC---EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT---SEEEEEETTT-EEEEEEECCSSCEEEEEE
T ss_pred CC---ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC---CEEEEEcCCC-ceeEEEcCccccceEEEE
Confidence 21 1111111 122334456778876 455433322 3455556332 11122222222222 235
Q ss_pred eeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 337 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 337 ~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+++|..|+.-+. .+.|...++.........+... ..+..+.+.++ .++... .++ .+.++++.+
T Consensus 222 s~~g~~l~sgs~-----dg~v~iwd~~~~~~~~~~~~~~--~~v~~v~~sp~~~~la~~-~d~--~v~iw~~~~ 285 (343)
T 2xzm_R 222 SPNGKYIATGGK-----DKKLLIWDILNLTYPQREFDAG--STINQIAFNPKLQWVAVG-TDQ--GVKIFNLMT 285 (343)
T ss_dssp CTTSSEEEEEET-----TCEEEEEESSCCSSCSEEEECS--SCEEEEEECSSSCEEEEE-ESS--CEEEEESSS
T ss_pred CCCCCEEEEEcC-----CCeEEEEECCCCcccceeecCC--CcEEEEEECCCCCEEEEE-CCC--CEEEEEeCC
Confidence 676766544332 2456666663222111123222 23777777664 333333 343 367777764
No 150
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.32 Score=47.54 Aligned_cols=198 Identities=11% Similarity=0.088 Sum_probs=102.5
Q ss_pred EEEEEEECCC--CCEEEEEEcCCCCeEEEEEEEECCCCCe--eccc--cCCccceeEEccC--CeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTP--VGKP--LVGVTASVEWAGN--EALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SPD--G~~LA~~~d~~G~E~~~l~v~dl~tg~~--~~~~--i~~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v 263 (534)
.|..+.|||+ |++||.+.. +| .|+|+|+.+++. +... .......++|+|+ +.++++...+ ..|
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----~~i 127 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSY-DG----KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD----GKV 127 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEET-TS----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT----SEE
T ss_pred cEEEEEeCCCCCCCEEEEecc-CC----EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC----CcE
Confidence 4677899988 888887654 33 599999999862 2211 1222355999999 7555554322 367
Q ss_pred EEeecCCCCCCceEeeeecCCceEEEEEEcC-------------CCcEEEEEecCcceeEEEEEeCCCCC-ceeEee--e
Q 009441 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASE-------------SKKFLFIASESKITRFVFYLDVSKPE-ELRVLT--P 327 (534)
Q Consensus 264 ~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~-------------Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~--~ 327 (534)
..+++.+........+.. .......+.+++ |+++++....+. .|++.++..+. ....+. .
T Consensus 128 ~v~d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~ 203 (379)
T 3jrp_A 128 SVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLE 203 (379)
T ss_dssp EEEECCTTSCCCEEEEEC-CTTCEEEEEECCCC----------CTTCEEEEEETTS---CEEEEEEETTTTEEEEEEEEC
T ss_pred EEEecCCCCceeeEEecC-CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC---eEEEEEecCCCcceeeEEEEe
Confidence 777776553222333332 223344577888 688877654432 45565655433 122221 1
Q ss_pred -ccccee-EEEeeeC--CEEEEEEcCCCCCccEEEEEeCCCCCC--ceEEecC-CCCceeeeEEEeCC-EEEEEEeeCCe
Q 009441 328 -RVVGVD-TAASHRG--NHFFITRRSDELFNSELLACPVDNTSE--TTVLIPH-RESVKLQDIQLFID-HLAVYEREGGL 399 (534)
Q Consensus 328 -~~~g~~-~~v~~~g--~~lyi~tn~~~~~~~~L~~~~~~~~~~--~~~li~~-~~~~~l~~~~~~~~-~lv~~~~~~g~ 399 (534)
....+. ..+++++ +.+++....+ +.|...++..... ...+... .....+..+.+.++ .+++....+|.
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 279 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQD----RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 279 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETT----SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSS
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCC----CEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCc
Confidence 111121 2256663 4444444432 2344444433211 1112221 12334777888653 44555555776
Q ss_pred eEEEEEE
Q 009441 400 QKITTYR 406 (534)
Q Consensus 400 ~~l~~~~ 406 (534)
-+++-++
T Consensus 280 i~iw~~~ 286 (379)
T 3jrp_A 280 VTLWKEN 286 (379)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 5555444
No 151
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.85 E-value=0.32 Score=45.74 Aligned_cols=198 Identities=8% Similarity=0.080 Sum_probs=114.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC-C--ccceeEEccCC-eEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-G--VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~-~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~ 267 (534)
....+.++|+++.|.++-..++ .|++++++++.... .+. + ...++++.+++ .+|++-. ...+|++.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~----~I~~~~~~g~~~~~-~~~~~~~~p~~ia~d~~~~~lyv~d~----~~~~I~~~~ 107 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEP----SIGRASLHGGEPTT-IIRQDLGSPEGIALDHLGRTIFWTDS----QLDRIEVAK 107 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTT----EEEEEESSSCCCEE-EECTTCCCEEEEEEETTTTEEEEEET----TTTEEEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCC----EEEEEecCCCCcEE-EEECCCCCccEEEEEecCCeEEEEEC----CCCEEEEEE
Confidence 4567899999888777644332 68889998765322 121 1 23458888877 5655532 234788877
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFI 345 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~lyi 345 (534)
+.... ...+.... ...-.++++++++++|++.........|+.++.++.. .+.+.....+.- ..++++++.||+
T Consensus 108 ~~g~~--~~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 108 MDGTQ--RRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp TTSCS--CEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred cCCCC--EEEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEE
Confidence 75331 22333211 1122357889988888776543334678888876543 233322111111 235667888887
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
.... +.+|.+++++.... ..+++.. ....++.+.+++||+....++ +|.+++..+ |+
T Consensus 184 ~d~~----~~~I~~~~~~g~~~-~~~~~~~--~~P~gi~~d~~~lyva~~~~~--~v~~~d~~~-g~ 240 (267)
T 1npe_A 184 VDAG----THRAECLNPAQPGR-RKVLEGL--QYPFAVTSYGKNLYYTDWKTN--SVIAMDLAI-SK 240 (267)
T ss_dssp EETT----TTEEEEEETTEEEE-EEEEECC--CSEEEEEEETTEEEEEETTTT--EEEEEETTT-TE
T ss_pred EECC----CCEEEEEecCCCce-EEEecCC--CCceEEEEeCCEEEEEECCCC--eEEEEeCCC-CC
Confidence 6542 35888888764211 1133321 124567777888888765444 688888874 55
No 152
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.84 E-value=0.43 Score=47.02 Aligned_cols=187 Identities=12% Similarity=0.103 Sum_probs=103.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC---ccceeEEccC--CeEEEEEECCCCCCceEEEee
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGN--EALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~---~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v~~~~ 267 (534)
+..+.|+||+++|+-+.. + .+++++|+++|+.+.. +.+ ....+.|+++ |.++++...+ ..|..++
T Consensus 157 v~~~~~~~~~~~l~t~s~-D----~~v~lwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~g~~l~sgs~D----g~v~~wd 226 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASG-D----GTCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCD----KKAMVWD 226 (354)
T ss_dssp EEEEEECSSSSEEEEEET-T----SEEEEEETTTCCEEEE-EECCSSCEEEEEECCCSSCCEEEEEETT----SCEEEEE
T ss_pred EEEEEEeCCCCEEEEEeC-C----CcEEEEeCCCCeEEEE-EcCCCCCeEEEEEEeCCCCCEEEEEeCC----CeEEEEE
Confidence 667899999999886543 2 3799999999987642 221 1234678764 4566666432 3677778
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc--cce-eEEEeeeCCEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGV-DTAASHRGNHFF 344 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~--~g~-~~~v~~~g~~ly 344 (534)
+.++. -...+.. .......+.++|++++|+..+.+ ..|.+.|+........+.... .++ ...++++|..|+
T Consensus 227 ~~~~~--~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D---~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 227 MRSGQ--CVQAFET-HESDVNSVRYYPSGDAFASGSDD---ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp TTTCC--EEEEECC-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred CCCCc--EEEEecC-CCCCeEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEE
Confidence 87653 2233432 22334467899999987654432 346666776543121121111 111 123556666555
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEE
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKI 402 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l 402 (534)
.-+.. +.|...++...... -.+....+ .+..+.+.++ ..++....+|.-+|
T Consensus 301 ~g~~d-----~~i~vwd~~~~~~~-~~l~~h~~-~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 301 AGYND-----YTINVWDVLKGSRV-SILFGHEN-RVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp EEETT-----SCEEEEETTTCSEE-EEECCCSS-CEEEEEECTTSSCEEEEETTSEEEE
T ss_pred EEECC-----CcEEEEECCCCceE-EEEECCCC-cEEEEEECCCCCEEEEEcCCCCEEe
Confidence 44432 34555666443211 12332323 4777777654 45566666664443
No 153
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.81 E-value=0.12 Score=51.53 Aligned_cols=201 Identities=13% Similarity=0.138 Sum_probs=97.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.|||||++||-+.. + .+|+|||+.+++.+.. .. ......++|+|||.++.+...+ ..+..+++.
T Consensus 68 ~V~~~~~sp~~~~l~s~s~-D----~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d----~~v~iw~~~ 138 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQ-D----GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD----SACSIFNLS 138 (380)
T ss_dssp CEEEEEECTTSSCEEEEET-T----SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS----SCCEEEECC
T ss_pred EEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC----CcEEEEECC
Confidence 4677899999999886543 2 3799999999876542 11 1123458999999554443221 233344443
Q ss_pred CCCCC-----ceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeee-cccce---eEE--Eee
Q 009441 270 ADQSN-----DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGV---DTA--ASH 338 (534)
Q Consensus 270 t~~~~-----d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~-~~~g~---~~~--v~~ 338 (534)
+.... -..++.. .......+.+++++...+++.... ..|.+-|+.++.....+.. ...+. ... +.+
T Consensus 139 ~~~~~~~~~~~~~~~~g-h~~~v~~~~~~~~~~~~l~s~s~D--~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTG-HKGYASSCQYVPDQETRLITGSGD--QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCSSCCCSSTTCCBCCC-CSSCCCCCBCCSSSSSCEEEECTT--SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred CCccccCCccceeeccC-CCcceEEEEEecCCCCEEEEECCC--CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 32100 0111211 112222345566654434433322 2455667766541111110 00111 111 223
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
.++.+++....+ +.+...|+.......-.+..... .+..+.+.++ ..++....+|. |+++++.+ |+
T Consensus 216 ~~~~~l~sgs~D----~~v~~wd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D~~--i~lwd~~~-~~ 282 (380)
T 3iz6_a 216 LNANMFISGSCD----TTVRLWDLRITSRAVRTYHGHEG-DINSVKFFPDGQRFGTGSDDGT--CRLFDMRT-GH 282 (380)
T ss_dssp SSCCEEEEEETT----SCEEEEETTTTCCCCEEECCCSS-CCCEEEECTTSSEEEEECSSSC--EEEEETTT-TE
T ss_pred CCCCEEEEEECC----CeEEEEECCCCCcceEEECCcCC-CeEEEEEecCCCeEEEEcCCCe--EEEEECCC-Cc
Confidence 233333333322 34555566422111112332323 4778888764 56677777774 66668775 44
No 154
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.80 E-value=0.016 Score=57.63 Aligned_cols=199 Identities=9% Similarity=0.016 Sum_probs=98.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC--CeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--TPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg--~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.|..+.|||||++||.+.. ...|+|+|+.++ +.+. .+. +....++|+||+.++.+...+ ..|..+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~-----d~~i~iw~~~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s~d----~~v~vw 82 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA-----TNQVELYEQDGNGWKHAR-TFSDHDKIVTCVDWAPKSNRIVTCSQD----RNAYVY 82 (377)
T ss_dssp CCSCCEECSSSSEEECCCS-----SSCBCEEEEETTEEEECC-CBCCCSSCEEEEEECTTTCCEEEEETT----SSEEEC
T ss_pred cEEEEEECCCCCEEEEecC-----CCEEEEEEccCCceEEEE-EEecCCceEEEEEEeCCCCEEEEEeCC----CeEEEE
Confidence 3666799999999986532 246999999988 3332 232 223458999999444444322 256666
Q ss_pred ecCCCC-CCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCc---eeEeee-ccccee-EEEeeeC
Q 009441 267 KLEADQ-SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE---LRVLTP-RVVGVD-TAASHRG 340 (534)
Q Consensus 267 ~lgt~~-~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~---~~~l~~-~~~g~~-~~v~~~g 340 (534)
++.++. ......+.. .......+.+++|+++|+..+.+ ..|.+.++..... .+.+.. ....+. ..+.+++
T Consensus 83 d~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGSGA---RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN 158 (377)
T ss_dssp ------CCCCEEECCC-CSSCEEEEECCTTSSCCEEEESS---SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred EcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEecC---CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence 765542 112223322 22234457899999988765543 2456666655431 233332 222222 2255666
Q ss_pred CEEEEEEcCCCCCccEEEEEeCCCCC-------------CceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEE
Q 009441 341 NHFFITRRSDELFNSELLACPVDNTS-------------ETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 406 (534)
Q Consensus 341 ~~lyi~tn~~~~~~~~L~~~~~~~~~-------------~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~ 406 (534)
..|+..+.. ..-+++.+...... ....+..-.....+..+.+.++ .+++....+|. |++++
T Consensus 159 ~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~--i~iwd 233 (377)
T 3dwl_C 159 VLLAAGCAD---RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSS--VTIAY 233 (377)
T ss_dssp SEEEEEESS---SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTE--EC-CE
T ss_pred CEEEEEeCC---CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCc--EEEEE
Confidence 656554432 22344443211000 0111111122234777777653 45566666774 56667
Q ss_pred CCC
Q 009441 407 LPA 409 (534)
Q Consensus 407 l~~ 409 (534)
+..
T Consensus 234 ~~~ 236 (377)
T 3dwl_C 234 PSA 236 (377)
T ss_dssp ECS
T ss_pred CCC
Confidence 764
No 155
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.79 E-value=0.39 Score=45.87 Aligned_cols=117 Identities=12% Similarity=0.089 Sum_probs=69.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCee---cccc---CCccceeEEcc--CCeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV---GKPL---VGVTASVEWAG--NEALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~---~~~i---~~~~~~~~Ws~--Dg~l~Y~~~d~~~r~~~v 263 (534)
.|..+.|||||++||.+.. + ..|+|+|+.++... ...+ ......++|+| |+.++++...+ ..|
T Consensus 13 ~v~~~~~~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d----g~v 83 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSS-D----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD----KTV 83 (351)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT----SCE
T ss_pred ceeEEEEcCCCCEEEEeeC-C----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC----CeE
Confidence 4778899999999988754 2 37999999876421 1112 22234589998 57555665432 245
Q ss_pred EEeecCCCCCCc-----eEeee-ecCCceEEEEEEcCC--CcEEEEEecCcceeEEEEEeCCCCC
Q 009441 264 WLHKLEADQSND-----ICLYH-EKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 264 ~~~~lgt~~~~d-----~lv~~-e~d~~~~v~~~~S~D--g~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
..+++.++.... ..+.. .........+.++++ +++++....+ ..|++.++..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~~ 145 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND---GILRLYDALEPS 145 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---CEEEEEECSSTT
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC---CcEEEecCCChH
Confidence 556664432110 22221 112233446789999 8887765432 356777776543
No 156
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.78 E-value=0.41 Score=46.02 Aligned_cols=196 Identities=10% Similarity=0.051 Sum_probs=98.2
Q ss_pred EEEEEEECCCC-CEEEEEEcCCCCeEEEEEEEECCCCCeec---c-ccC---CccceeEEccCCeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSPDN-KLVAYAEDTKGDEIYTVYVIDIETGTPVG---K-PLV---GVTASVEWAGNEALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SPDG-~~LA~~~d~~G~E~~~l~v~dl~tg~~~~---~-~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v 263 (534)
.|..++||||+ ++|| +.+.+| +|+|||+.+++... . .+. +....+.|+|||.++++...+ ..|
T Consensus 40 ~V~~v~~sp~~~~~l~-S~s~D~----~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d----~~i 110 (340)
T 4aow_A 40 WVTQIATTPQFPDMIL-SASRDK----TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD----GTL 110 (340)
T ss_dssp CEEEEEECTTCTTEEE-EEETTS----CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT----SEE
T ss_pred CEEEEEEeCCCCCEEE-EEcCCC----eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc----ccc
Confidence 57788999985 5655 433344 69999998775321 1 222 223458999999655665322 256
Q ss_pred EEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeee-ccccee-EEEeeeCC
Q 009441 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TAASHRGN 341 (534)
Q Consensus 264 ~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~-~~~g~~-~~v~~~g~ 341 (534)
+.++..... ...... ...........++++++++..+.+ ..+.+.+............ ....+. ..+..++.
T Consensus 111 ~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 111 RLWDLTTGT--TTRRFV-GHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp EEEETTTTE--EEEEEE-CCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred eEEeecccc--eeeeec-CCCCceeEEEEeecCccceeecCC---CeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 666665431 111121 122233345678888887654332 2344555544321111111 111111 12334444
Q ss_pred EEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCC
Q 009441 342 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 342 ~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
..++++.. ....|...++.+.... ..+..... .+..+.+.+ +.+++....+| .|.++++..
T Consensus 185 ~~~~~s~~---~d~~i~i~d~~~~~~~-~~~~~h~~-~v~~~~~s~~~~~l~s~s~Dg--~i~iwd~~~ 246 (340)
T 4aow_A 185 NPIIVSCG---WDKLVKVWNLANCKLK-TNHIGHTG-YLNTVTVSPDGSLCASGGKDG--QAMLWDLNE 246 (340)
T ss_dssp SCEEEEEE---TTSCEEEEETTTTEEE-EEECCCSS-CEEEEEECTTSSEEEEEETTC--EEEEEETTT
T ss_pred CcEEEEEc---CCCEEEEEECCCCcee-eEecCCCC-cEEEEEECCCCCEEEEEeCCC--eEEEEEecc
Confidence 33444432 1234555566543211 12222223 477787765 35666666677 466678874
No 157
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.76 E-value=0.13 Score=55.91 Aligned_cols=194 Identities=11% Similarity=0.061 Sum_probs=100.8
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.+||||++|+-+.. + .+|+|+|+.+|+.+... -.+....++|+||+..+.+...+ ..|..+++.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~-D----g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D----~~i~iwd~~ 502 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSW-D----GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD----RTIKLWNTL 502 (694)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT----SCEEEECTT
T ss_pred cEEEEEECCCCCEEEEEeC-C----CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC----CEEEEEECC
Confidence 4677899999999986543 2 37999999998765421 11223458999999544554322 245555543
Q ss_pred CCCCCceEeee--ecCCceEEEEEEcCCCcE-EEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEEE
Q 009441 270 ADQSNDICLYH--EKDDIYSLGLQASESKKF-LFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFF 344 (534)
Q Consensus 270 t~~~~d~lv~~--e~d~~~~v~~~~S~Dg~~-l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~ly 344 (534)
.. ....+.. +........+.+++++.. +++.... ...|.+.++.+.. .........+.. ..++++|..|+
T Consensus 503 ~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~--d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~~l~ 577 (694)
T 3dm0_A 503 GE--CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW--DKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGSLCA 577 (694)
T ss_dssp SC--EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CC--cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC--CCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCCCEEE
Confidence 22 1111211 112233445788898732 3333322 2346667776654 322222222222 23566666554
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.-+. ++.|...++.+.. .+........+..+.+.++..++....++ .|.++++..
T Consensus 578 sg~~-----Dg~i~iwd~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~~~~~~--~i~iwd~~~ 632 (694)
T 3dm0_A 578 SGGK-----DGVVLLWDLAEGK---KLYSLEANSVIHALCFSPNRYWLCAATEH--GIKIWDLES 632 (694)
T ss_dssp EEET-----TSBCEEEETTTTE---EEECCBCSSCEEEEEECSSSSEEEEEETT--EEEEEETTT
T ss_pred EEeC-----CCeEEEEECCCCc---eEEEecCCCcEEEEEEcCCCcEEEEEcCC--CEEEEECCC
Confidence 4332 2345556665432 12211122347777776653333333333 377888874
No 158
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.75 E-value=0.52 Score=47.94 Aligned_cols=186 Identities=11% Similarity=0.004 Sum_probs=106.7
Q ss_pred EECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCC
Q 009441 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSN 274 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~ 274 (534)
.++++|++|+.+... | .|+++|+.+++.+... -.+....+.|++++..+++...+ ..|+.+++.++.
T Consensus 275 ~~~~~~~~l~~~~~d-~----~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d----g~i~vwd~~~~~-- 343 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYD-N----TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD----TTIRIWDLENGE-- 343 (464)
T ss_dssp EEEEETTEEEEEETT-S----CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT----SCEEEEETTTTE--
T ss_pred EEcCCCCEEEEEeCC-C----eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCc--
Confidence 457899999887543 3 5999999998866421 12223458999999555555432 357777876542
Q ss_pred ceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcCCCCC
Q 009441 275 DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELF 353 (534)
Q Consensus 275 d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~~~~~ 353 (534)
....+... ......+.++ +++++..+.+ ..|.+.++.++. ........... ...+.+++..++.-+ +
T Consensus 344 ~~~~~~~h-~~~v~~~~~~--~~~l~s~s~d---g~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~--d--- 411 (464)
T 3v7d_B 344 LMYTLQGH-TALVGLLRLS--DKFLVSAAAD---GSIRGWDANDYS-RKFSYHHTNLSAITTFYVSDNILVSGS--E--- 411 (464)
T ss_dssp EEEEECCC-SSCEEEEEEC--SSEEEEEETT---SEEEEEETTTCC-EEEEEECTTCCCEEEEEECSSEEEEEE--T---
T ss_pred EEEEEeCC-CCcEEEEEEc--CCEEEEEeCC---CcEEEEECCCCc-eeeeecCCCCccEEEEEeCCCEEEEec--C---
Confidence 22223221 2222234444 5666554432 346777877654 11111111111 233566666444322 2
Q ss_pred ccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEEC
Q 009441 354 NSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 407 (534)
Q Consensus 354 ~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l 407 (534)
+.+...++.+.......+... ...+..+.+.++.+++....+|...++++++
T Consensus 412 -g~i~iwd~~~g~~~~~~~~~~-~~~v~~v~~~~~~l~~~~~~~g~~~i~~ldf 463 (464)
T 3v7d_B 412 -NQFNIYNLRSGKLVHANILKD-ADQIWSVNFKGKTLVAAVEKDGQSFLEILDF 463 (464)
T ss_dssp -TEEEEEETTTCCEEESCTTTT-CSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred -CeEEEEECCCCcEEehhhccC-CCcEEEEEecCCEEEEEEEeCCeEEEEEeec
Confidence 456677776543211112222 3458888888899999999999888888875
No 159
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.75 E-value=0.072 Score=54.58 Aligned_cols=136 Identities=11% Similarity=0.138 Sum_probs=78.7
Q ss_pred eecchhcCCCCcEEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC----CccceeEEccCCeEEEEE
Q 009441 179 LDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV----GVTASVEWAGNEALVYIT 253 (534)
Q Consensus 179 lD~n~~a~~~~~~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~----~~~~~~~Ws~Dg~l~Y~~ 253 (534)
+.+.++.+..|+.....+..+|||=+|...-+..|+....+.++|.+|++.+.. ... .....+.|+|++..+|++
T Consensus 126 ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS 205 (462)
T 2ece_A 126 IEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSS 205 (462)
T ss_dssp ECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEEC
T ss_pred echhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEc
Confidence 444455433455566777899999444444444566667899999999998753 111 122347889999888887
Q ss_pred E-----------CCC----CCCceEEEeecCCCCCCceEeeeecCC-ce--EEEEEEcCCCcEEEEEec---CcceeEEE
Q 009441 254 M-----------DEI----LRPDKAWLHKLEADQSNDICLYHEKDD-IY--SLGLQASESKKFLFIASE---SKITRFVF 312 (534)
Q Consensus 254 ~-----------d~~----~r~~~v~~~~lgt~~~~d~lv~~e~d~-~~--~v~~~~S~Dg~~l~i~~~---~~~~~ev~ 312 (534)
. +.. ....+|..+++.+.. -.-.+.-..+ .. -+.+.++|||+++++... ...+++|+
T Consensus 206 ~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~ 283 (462)
T 2ece_A 206 EWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIW 283 (462)
T ss_dssp BCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEE
T ss_pred cCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEE
Confidence 3 000 235788888887541 1111111111 11 222345999999988654 12334555
Q ss_pred EEeC
Q 009441 313 YLDV 316 (534)
Q Consensus 313 ~~d~ 316 (534)
++..
T Consensus 284 v~~~ 287 (462)
T 2ece_A 284 LWFY 287 (462)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4433
No 160
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.74 E-value=0.46 Score=46.01 Aligned_cols=149 Identities=15% Similarity=0.220 Sum_probs=85.5
Q ss_pred EEEEEEECCC---CCEEEEEEcCCCCeEEEEEEEECCC-CCeecccc---CCccceeEEccCCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPD---NKLVAYAEDTKGDEIYTVYVIDIET-GTPVGKPL---VGVTASVEWAGNEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPD---G~~LA~~~d~~G~E~~~l~v~dl~t-g~~~~~~i---~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+.|||| |++||.+.. +| .|+|+|+.+ ++.+...+ .+....++|+||+.++++...+ ..|.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~v~ 111 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSW-AN----DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD----KTAK 111 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEET-TS----EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT----SEEE
T ss_pred ceEEEEEcCCCCCceEEEEECC-CC----cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC----CcEE
Confidence 5788899999 588887644 33 699999988 55442222 2223459999999555555322 3677
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEE--cCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCE
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQA--SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNH 342 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~--S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~ 342 (534)
.+++.+.. -..+.. .......+.+ ++++++++....+ ..|++.++.++.....+. ... ....+...++.
T Consensus 112 iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~-~~~-~~~~~~~~~~~ 182 (368)
T 3mmy_A 112 MWDLSSNQ--AIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSWD---KTLKFWDTRSSNPMMVLQ-LPE-RCYCADVIYPM 182 (368)
T ss_dssp EEETTTTE--EEEEEE--CSSCEEEEEEEECSSCEEEEEEETT---SEEEEECSSCSSCSEEEE-CSS-CEEEEEEETTE
T ss_pred EEEcCCCC--ceeecc--ccCceEEEEEEeCCCCCEEEEccCC---CcEEEEECCCCcEEEEEe-cCC-CceEEEecCCe
Confidence 77876552 122222 2222334566 8999987765433 357888887654122222 211 22334455666
Q ss_pred EEEEEcCCCCCccEEEEEeCC
Q 009441 343 FFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~ 363 (534)
+++.+.. ..+...++.
T Consensus 183 ~~~~~~~-----~~i~~~~~~ 198 (368)
T 3mmy_A 183 AVVATAE-----RGLIVYQLE 198 (368)
T ss_dssp EEEEEGG-----GCEEEEECS
T ss_pred eEEEeCC-----CcEEEEEec
Confidence 6665542 234455554
No 161
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.74 E-value=0.034 Score=56.87 Aligned_cols=196 Identities=13% Similarity=0.113 Sum_probs=103.6
Q ss_pred EEEEEECC-CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc---CCccceeEEccC-CeEEEEEECCCCCCceEEEe
Q 009441 193 VGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---VGVTASVEWAGN-EALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 193 l~~~~~SP-DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i---~~~~~~~~Ws~D-g~l~Y~~~d~~~r~~~v~~~ 266 (534)
|..++|+| ++++||.+.. +| +|+|||+.+++.... .. .+....++|+|. +.++++...+ ..|..+
T Consensus 122 V~~l~~~P~~~~~lasGs~-dg----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D----~~v~iw 192 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSK-GG----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME----GTTRLQ 192 (435)
T ss_dssp EEEEEECSSCTTCEEEEET-TS----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS----SCEEEE
T ss_pred EEEEEEeCCCCCEEEEEeC-CC----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC----CEEEEe
Confidence 77889999 5677877644 34 599999988864321 12 122356999984 5666766322 246666
Q ss_pred ecCCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEE
Q 009441 267 KLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 344 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~ly 344 (534)
++.+.. -..+.... .......+.+++|+++|+....+ ..|++.++.+.. ...+......+. ..+.+.++.++
T Consensus 193 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 193 DFKGNI--LRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMDGKE-LWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp ETTSCE--EEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESSSCB-CCCSBCCSSCEEEEEECTTCSSEE
T ss_pred eccCCc--eeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccCcce-eEEEecccceEEeeeecCCCceEE
Confidence 775431 12222221 12233457889999988764432 346777876532 322322222222 22555666555
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCc-eEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 345 ITRRSDELFNSELLACPVDNTSET-TVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~-~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+....+ +.|...|+...... ..+........+..+.+..+ ..++....+|. |+++++..
T Consensus 267 ~s~s~d----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~--i~iwd~~~ 327 (435)
T 4e54_B 267 ATASVD----QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE--IRVYSASQ 327 (435)
T ss_dssp EEEETT----SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC--EEEEESSS
T ss_pred EEecCc----ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE--EEEEECCC
Confidence 544432 23334455432211 11111111223666666543 45556666664 66667764
No 162
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.67 E-value=0.81 Score=47.88 Aligned_cols=192 Identities=15% Similarity=0.086 Sum_probs=102.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
.+..+.+||||++||.+.+ +| +++++|+.+.+...... ......++|+|||.++.+...+ ..+..++...
T Consensus 305 ~v~~~~~~~~~~~l~t~~~-d~----~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----g~v~~~~~~~ 375 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASD-DK----TVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDD----KTVKLWNRNG 375 (577)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----CEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEETTC
T ss_pred CeEEEEECCCCCEEEEEeC-CC----eEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEcCCC
Confidence 4667889999999987654 23 58999987665432111 1223458999999444444322 2455555421
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~ 349 (534)
+....+.. ...-...+.+++||++|+....+ ..|.+.+.... ..+.+......+. ..+++++..|+..+..
T Consensus 376 ---~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~d---~~v~~~~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 376 ---QLLQTLTG-HSSSVRGVAFSPDGQTIASASDD---KTVKLWNRNGQ-LLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp ---CEEEEEEC-CSSCEEEEEECTTSSCEEEEETT---SEEEEECTTCC-EEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred ---CEEEEecC-CCCCeEEEEECCCCCEEEEEeCC---CEEEEEeCCCC-EEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 11112222 12223457899999998765433 34666665432 1333333222222 2356666666544432
Q ss_pred CCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
+.|...+... .....+..+. . .+..+.+.++ .+++....++. |++++.+ |+
T Consensus 448 -----~~v~~w~~~~-~~~~~~~~~~-~-~v~~~~~spd~~~las~~~d~~--i~iw~~~--~~ 499 (577)
T 2ymu_A 448 -----KTVKLWNRNG-QLLQTLTGHS-S-SVRGVAFSPDGQTIASASDDKT--VKLWNRN--GQ 499 (577)
T ss_dssp -----SEEEEEETTS-CEEEEEECCS-S-CEEEEEECTTSCEEEEEETTSE--EEEEETT--SC
T ss_pred -----CEEEEEECCC-CEEEEEcCCC-C-CEEEEEEcCCCCEEEEEeCCCE--EEEEcCC--CC
Confidence 3455555432 1111133332 2 4777777653 56666666774 5666765 55
No 163
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.43 Score=46.45 Aligned_cols=196 Identities=13% Similarity=0.153 Sum_probs=94.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC-------eeccccC---CccceeEEccCCeEEEEEECCCCCCc
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-------PVGKPLV---GVTASVEWAGNEALVYITMDEILRPD 261 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~-------~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~ 261 (534)
.|..+.|||||++||-+.. +| +++|+|+.++. .+. .+. +....++|+|||.++.+...+ .
T Consensus 60 ~v~~v~~sp~~~~las~s~-D~----~v~iw~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~sp~g~~las~s~D----~ 129 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSF-DS----TVSIWAKEESADRTFEMDLLA-IIEGHENEVKGVAWSNDGYYLATCSRD----K 129 (330)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----CEEEEEC-------CCCEEEE-EEC----CEEEEEECTTSCEEEEEETT----S
T ss_pred CEEEEEECCCCCEEEEEeC-CC----cEEEEEcccCcCccccceeEE-EEcCCCCcEEEEEECCCCCEEEEEeCC----C
Confidence 4778899999999987654 23 68999986432 111 222 123459999999555555332 3
Q ss_pred eEEEeecCCCCCCceE--eeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-c-eeEeeecccceeEE--
Q 009441 262 KAWLHKLEADQSNDIC--LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-E-LRVLTPRVVGVDTA-- 335 (534)
Q Consensus 262 ~v~~~~lgt~~~~d~l--v~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~-~~~l~~~~~g~~~~-- 335 (534)
.|+.+++......-.. .+.. .......+.++||+++|+..+.+ .+-.+| +...+. . ...+... .+....
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D-~~i~iW--~~~~~~~~~~~~~~~h-~~~v~~~~ 204 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSSYD-DTVRIW--KDYDDDWECVAVLNGH-EGTVWSSD 204 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEETT-SCEEEE--EEETTEEEEEEEECCC-SSCEEEEE
T ss_pred EEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEcCC-CeEEEE--ECCCCCeeEEEEccCC-CCcEEEEE
Confidence 5666676322111122 2322 22334467899999987654332 222334 333321 1 1122211 121222
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCC-CCCceE----EecCCCCceeeeEEEeCCEEEEEEeeCCeeEEE
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDN-TSETTV----LIPHRESVKLQDIQLFIDHLAVYEREGGLQKIT 403 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~-~~~~~~----li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~ 403 (534)
+.++++..++.+.. ....-+|+.+.-.. .....| .++......+..+.+..+.+++....+|.-+|+
T Consensus 205 ~~~~~~~~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw 276 (330)
T 2hes_X 205 FDKTEGVFRLCSGS-DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVY 276 (330)
T ss_dssp ECCSSSSCEEEEEE-TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEE
T ss_pred ecCCCCeeEEEEEe-CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEE
Confidence 44443222233321 11234554433211 111233 222212234777777666667777777754444
No 164
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.61 E-value=0.073 Score=52.62 Aligned_cols=112 Identities=14% Similarity=0.127 Sum_probs=59.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC---eecc--ccCCccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT---PVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~---~~~~--~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
.+..+.|||||++||.+.. +| +|+|+|+.+++ .... ........++|+||+ .|+....+ ..|..
T Consensus 57 ~v~~~~~s~~~~~l~s~s~-d~----~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i 126 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQ-DR----NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISV 126 (377)
T ss_dssp CEEEEEECTTTCCEEEEET-TS----SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEE
T ss_pred eEEEEEEeCCCCEEEEEeC-CC----eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEE
Confidence 4778899999999987654 33 59999999887 2111 112223459999999 55444433 25666
Q ss_pred eecCCCCCC-ceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeC
Q 009441 266 HKLEADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (534)
Q Consensus 266 ~~lgt~~~~-d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~ 316 (534)
+++.+...- -...+..........+.+++|+++|+..+.+ ..+.+.++
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~ 175 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD---RKAYVLSA 175 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS---SCEEEEEE
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC---CEEEEEEE
Confidence 676554210 1122222123344568899999988765443 23455554
No 165
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.60 E-value=0.018 Score=58.95 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=63.5
Q ss_pred EEEECCCCCEEEEEEcCC-------C--------CeEEEEEEEECCCCCeecc-ccC--Cc-cceeE--EccCCeEEEEE
Q 009441 195 CFQVSPDNKLVAYAEDTK-------G--------DEIYTVYVIDIETGTPVGK-PLV--GV-TASVE--WAGNEALVYIT 253 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~-------G--------~E~~~l~v~dl~tg~~~~~-~i~--~~-~~~~~--Ws~Dg~l~Y~~ 253 (534)
.+.|+||++ ++|+.+-+ | ...-+|+++|+++++.+.. .+. +. .-.+. ++|||.+.|+.
T Consensus 192 d~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~ 270 (462)
T 2ece_A 192 DFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN 270 (462)
T ss_dssp CEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE
T ss_pred eEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE
Confidence 468899999 55555411 1 1124799999999876542 221 11 11233 48999666766
Q ss_pred EC--CCCCCceEEEeecCCCCCCceEeee--e-c--------C------CceEEEEEEcCCCcEEEEEecCcceeEEEEE
Q 009441 254 MD--EILRPDKAWLHKLEADQSNDICLYH--E-K--------D------DIYSLGLQASESKKFLFIASESKITRFVFYL 314 (534)
Q Consensus 254 ~d--~~~r~~~v~~~~lgt~~~~d~lv~~--e-~--------d------~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~ 314 (534)
.. .......|+.+....+.-+.+.+.. . + . +..-.++.+|+|||+|.+.- ...+.|.++
T Consensus 271 ~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn--rg~d~Vavf 348 (462)
T 2ece_A 271 MVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL--WGIGEVRQY 348 (462)
T ss_dssp EEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE--TTTTEEEEE
T ss_pred EeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEe--CCCCEEEEE
Confidence 43 1112234543222111101111110 0 0 0 12223578999999988743 334678888
Q ss_pred eCCCC
Q 009441 315 DVSKP 319 (534)
Q Consensus 315 d~~~~ 319 (534)
+..++
T Consensus 349 dV~d~ 353 (462)
T 2ece_A 349 DISNP 353 (462)
T ss_dssp ECSST
T ss_pred EecCC
Confidence 87543
No 166
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.57 E-value=0.29 Score=49.72 Aligned_cols=202 Identities=9% Similarity=0.009 Sum_probs=109.7
Q ss_pred cEEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC-ccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 190 ~~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~-~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
+.....+.++|||+ .|.++..+ ..|+++|+++|+.....-.. ... ++|++++..+|...... ..+||+.+.
T Consensus 130 ~~~P~~la~d~~g~--lyv~d~~~---~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~--~~~I~~~d~ 201 (409)
T 3hrp_A 130 FKYMWGIAAVGNNT--VLAYQRDD---PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEG--THTVYVYMK 201 (409)
T ss_dssp CCCEEEEEECSTTE--EEEEETTT---TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSST--TCEEEEEEG
T ss_pred cCCceEEEEeCCCC--EEEEecCC---CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCC--CceEEEEEc
Confidence 34567789999998 45556543 26999999988764321111 223 89999995556553221 227888887
Q ss_pred CCCCCCceEeee-ec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEe----eecccce----eEEEee
Q 009441 269 EADQSNDICLYH-EK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL----TPRVVGV----DTAASH 338 (534)
Q Consensus 269 gt~~~~d~lv~~-e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l----~~~~~g~----~~~v~~ 338 (534)
.+... ...+-. .. ....-.++++++++..|++... +..|+.++.++.. ...+ .....+. ...+++
T Consensus 202 ~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 202 ASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---NKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp GGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECT---TCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEET
T ss_pred CCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---CCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEeC
Confidence 65422 112200 01 1112224678896667777322 4578999987654 3333 1111111 222556
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC-------------CCceeeeEEEeCC-EEEEEEeeCCeeEEEE
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-------------ESVKLQDIQLFID-HLAVYEREGGLQKITT 404 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-------------~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~ 404 (534)
.++.||+... .+.+|.+++.+.. ...++... .-....++.+..+ .||+... .+..+|++
T Consensus 277 ~~g~lyv~d~----~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~-~~~~~I~~ 349 (409)
T 3hrp_A 277 VDSNFYMSDQ----NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG-FKGYCLRK 349 (409)
T ss_dssp TTTEEEEEET----TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET-TTTCEEEE
T ss_pred CCCEEEEEeC----CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC-CCCCEEEE
Confidence 6788887543 2467888876531 11122111 0112566777653 4666543 03457888
Q ss_pred EECCCCCC
Q 009441 405 YRLPAVGE 412 (534)
Q Consensus 405 ~~l~~~g~ 412 (534)
+++.. |.
T Consensus 350 ~~~~~-G~ 356 (409)
T 3hrp_A 350 LDILD-GY 356 (409)
T ss_dssp EETTT-TE
T ss_pred EECCC-CE
Confidence 88553 54
No 167
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.57 Score=47.18 Aligned_cols=199 Identities=11% Similarity=0.072 Sum_probs=103.5
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECC---CCCeecc----c----------cCCccceeE--EccCCeEEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE---TGTPVGK----P----------LVGVTASVE--WAGNEALVYI 252 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~---tg~~~~~----~----------i~~~~~~~~--Ws~Dg~l~Y~ 252 (534)
.|..+.|+||+++||.+.. +| +|+++|++ +|+.+.. . .......+. |++|+.++++
T Consensus 113 ~v~~~~~~~~~~~l~s~s~-dg----~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSK-DG----QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeC-CC----EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 4778899999999987654 23 68999984 5544321 0 011111122 5677755555
Q ss_pred EECCCCCCceEEEeecCCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc
Q 009441 253 TMDEILRPDKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG 331 (534)
Q Consensus 253 ~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g 331 (534)
...+ ..|+.+++.+.. ....+... .......+.+++|+++|+..+.+ ..|.+.|+..+.....+.....+
T Consensus 188 ~~~d----~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 188 LTNL----SRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp EETT----SEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETTTTEEEEEEBCTTCE
T ss_pred EeCC----CeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcCCccEEEEEecCCCC
Confidence 4332 368888887652 23333321 22344467899999998765543 34677777664312222111111
Q ss_pred eeEEE--eee--CCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC------------------------CCceeeeE
Q 009441 332 VDTAA--SHR--GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR------------------------ESVKLQDI 383 (534)
Q Consensus 332 ~~~~v--~~~--g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~------------------------~~~~l~~~ 383 (534)
....+ .+. .+.-++++.. .++.|...++.+.....-+..+. ....+..+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGS---SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEES---TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred ceEEEEeccccCCCccEEEEEc---CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 11112 111 2233333332 22456566664322110011110 11235566
Q ss_pred EEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 384 QLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 384 ~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
.+.++.+++....+| .|+++++..
T Consensus 336 ~~~~~~~l~s~~~d~--~i~~wd~~~ 359 (437)
T 3gre_A 336 SVSNDKILLTDEATS--SIVMFSLNE 359 (437)
T ss_dssp EEETTEEEEEEGGGT--EEEEEETTC
T ss_pred EECCceEEEecCCCC--eEEEEECCC
Confidence 666777888887777 577778874
No 168
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.54 E-value=0.6 Score=44.81 Aligned_cols=196 Identities=11% Similarity=0.061 Sum_probs=96.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc--CCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i--~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.|||||++|+-+.. + ..+++++...+....... ........|++++.++++...+ ..+..+++.
T Consensus 88 ~V~~~~~s~dg~~l~s~~~-d----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d----~~~~~~d~~ 158 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSW-D----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD----KTIKLWNTL 158 (340)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT----SCEEEECTT
T ss_pred CEEEEEECCCCCEEEEEcc-c----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC----CeEEEEEeC
Confidence 4778899999999987543 2 368899988876543211 2223446788888444444322 234445543
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
... ...+...........+.+++++...++.+.+ ....+.+.++........+......+. ..+++++..|+..+.
T Consensus 159 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 159 GVC--KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG-WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp SCE--EEEECSSSCSSCEEEEEECSCSSSCEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCc--eEEEEeccccCcccceEEccCCCCcEEEEEc-CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 321 1111111112222335566665443332221 123466667766431122222222222 225566665544332
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
++.+...++...... ..+... + .+..+.+.++..++....++ .|.+++++.
T Consensus 236 -----Dg~i~iwd~~~~~~~-~~~~~~-~-~v~~~~~~~~~~~~~~~~d~--~i~iwd~~~ 286 (340)
T 4aow_A 236 -----DGQAMLWDLNEGKHL-YTLDGG-D-IINALCFSPNRYWLCAATGP--SIKIWDLEG 286 (340)
T ss_dssp -----TCEEEEEETTTTEEE-EEEECS-S-CEEEEEECSSSSEEEEEETT--EEEEEETTT
T ss_pred -----CCeEEEEEeccCcee-eeecCC-c-eEEeeecCCCCceeeccCCC--EEEEEECCC
Confidence 245666676543211 123322 2 36666666654444454566 466778773
No 169
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.54 E-value=0.54 Score=45.42 Aligned_cols=194 Identities=8% Similarity=0.082 Sum_probs=102.9
Q ss_pred EEEEEEECCC---CCEEEEEEcCCCCeEEEEEEEECCCCC-eeccccC---Ccccee------EEccCCeEEEEEECCCC
Q 009441 192 SVGCFQVSPD---NKLVAYAEDTKGDEIYTVYVIDIETGT-PVGKPLV---GVTASV------EWAGNEALVYITMDEIL 258 (534)
Q Consensus 192 ~l~~~~~SPD---G~~LA~~~d~~G~E~~~l~v~dl~tg~-~~~~~i~---~~~~~~------~Ws~Dg~l~Y~~~d~~~ 258 (534)
.+..+.|+|+ |++||.+.. +| .|+++|+.+++ .+. .+. .....+ +|++|+.++++...+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~-dg----~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d-- 138 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDF-GG----NLHIWNLEAPEMPVY-SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD-- 138 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEET-TS----CEEEECTTSCSSCSE-EECCCSSCEEEEEEESGGGCC-CCCEEEEEETT--
T ss_pred cEEEEEEcCCCCCCceEEEecC-CC----eEEEEeCCCCCccEE-EEEecccceEEEeeccccccCCCccEEEEEeCC--
Confidence 4677899999 688887654 33 59999999887 332 121 222335 456788555554322
Q ss_pred CCceEEEeecCCCCCCceEeeeecC---CceEEEEE----EcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc
Q 009441 259 RPDKAWLHKLEADQSNDICLYHEKD---DIYSLGLQ----ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG 331 (534)
Q Consensus 259 r~~~v~~~~lgt~~~~d~lv~~e~d---~~~~v~~~----~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g 331 (534)
..|..+++.++.. ....+.... ......+. +++++++++....+ ..|++.++..+. ..........
T Consensus 139 --~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~-~~~~~~~~~~ 211 (357)
T 3i2n_A 139 --GTVKVWDPRQKDD-PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN---GDIKLFDLRNMA-LRWETNIKNG 211 (357)
T ss_dssp --SCEEEECTTSCSS-CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT---SEEEEEETTTTE-EEEEEECSSC
T ss_pred --CeEEEEeCCCCCC-cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC---CeEEEEECccCc-eeeecCCCCc
Confidence 3577777766531 122332111 11222333 68999998775443 367888887754 3222222222
Q ss_pred ee-EEEee---eCCEEEEEEcCCCCCccEEEEEeCCCCCC-ceE---EecCCCCceeeeEEEeCC-E-EEEEEeeCCeeE
Q 009441 332 VD-TAASH---RGNHFFITRRSDELFNSELLACPVDNTSE-TTV---LIPHRESVKLQDIQLFID-H-LAVYEREGGLQK 401 (534)
Q Consensus 332 ~~-~~v~~---~g~~lyi~tn~~~~~~~~L~~~~~~~~~~-~~~---li~~~~~~~l~~~~~~~~-~-lv~~~~~~g~~~ 401 (534)
+. ..+.+ +++.|+..+.. +.|...++..... ... ..... ...+..+.+.++ . +++....+|.-
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i- 284 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVRHLPQNRELFLTAGGAGGL- 284 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEEEETTTEEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEE-
T ss_pred eEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcCCCcccceeeeccCCC-cCCEEEEEECCCCCcEEEEEeCCCcE-
Confidence 22 22555 56666554432 3454455432111 111 11122 235888888875 3 67777778854
Q ss_pred EEEEECC
Q 009441 402 ITTYRLP 408 (534)
Q Consensus 402 l~~~~l~ 408 (534)
.++++.
T Consensus 285 -~iwd~~ 290 (357)
T 3i2n_A 285 -HLWKYE 290 (357)
T ss_dssp -EEEEEE
T ss_pred -EEeecC
Confidence 444554
No 170
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.49 E-value=0.043 Score=56.38 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=71.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC--------Ceec--ccc---CCccceeEEccCC-eEEEEEECCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--------TPVG--KPL---VGVTASVEWAGNE-ALVYITMDEI 257 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg--------~~~~--~~i---~~~~~~~~Ws~Dg-~l~Y~~~d~~ 257 (534)
.+..+.|||||++||.+... |+...+|+|+|+.++ +.+. ..+ ......++|+|++ .++.+...+
T Consensus 94 ~v~~l~~spdg~~lav~~~s-gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D- 171 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS-SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD- 171 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE-TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT-
T ss_pred cccEEEEcCCCCEEEEEEec-cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC-
Confidence 37788999999999986532 455678999998765 1111 011 1223459999984 666665432
Q ss_pred CCCceEEEeecCCCCCCceEeee-ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC
Q 009441 258 LRPDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~lv~~-e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~ 317 (534)
..|+.+++.+.. .+.. .........+.+++||++|+....+ ..|.+.+.+
T Consensus 172 ---g~v~iwD~~~~~----~~~~~~~~~~~v~~v~wspdg~~lasgs~d---g~v~iwd~~ 222 (434)
T 2oit_A 172 ---GSIAVLQVTETV----KVCATLPSTVAVTSVCWSPKGKQLAVGKQN---GTVVQYLPT 222 (434)
T ss_dssp ---SCEEEEEESSSE----EEEEEECGGGCEEEEEECTTSSCEEEEETT---SCEEEECTT
T ss_pred ---CeEEEEEcCCCc----ceeeccCCCCceeEEEEcCCCCEEEEEcCC---CcEEEEccC
Confidence 357777776541 2221 1112234468899999998876533 346777776
No 171
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.48 E-value=0.86 Score=49.41 Aligned_cols=198 Identities=12% Similarity=0.103 Sum_probs=103.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCee----ccccC---CccceeEEccCCeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV----GKPLV---GVTASVEWAGNEALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~----~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+.++|++..+.++.+.+| +|+|+|+.++... ...+. +....++|++||.++.+...+ ..|.
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~----~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D----g~v~ 455 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDK----SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD----GELR 455 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTS----EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEE
T ss_pred eeEEEEecCCCCCEEEEEeCCC----cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC----CcEE
Confidence 4677889998755555544444 7999999865321 11122 223458999999665665432 3677
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc----ee-EEEeee
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG----VD-TAASHR 339 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g----~~-~~v~~~ 339 (534)
.+++.++. ....+.. ...-...+.+++|+++|+..+.+ ..|.+-+..... ...+.....+ +. ..++++
T Consensus 456 vwd~~~~~--~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 456 LWDLAAGV--STRRFVG-HTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLGEC-KYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEETTTTE--EEEEEEC-CSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCE-EEEECSSTTSCSSCEEEEEECSC
T ss_pred EEECCCCc--ceeEEeC-CCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCCCc-ceeeccCCCCCCCcEEEEEEeCC
Confidence 78887652 2223332 22234467899999987654432 234455554321 1122211111 11 124444
Q ss_pred CCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 340 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 340 g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
+..-++++.. ..+.|...++.+.... ..+..+.. .+..+.+.++ .+++....+|. |+++++.. ++
T Consensus 529 ~~~~~l~s~s---~d~~v~vwd~~~~~~~-~~~~~h~~-~v~~v~~spdg~~l~sg~~Dg~--i~iwd~~~-~~ 594 (694)
T 3dm0_A 529 TLQPTIVSAS---WDKTVKVWNLSNCKLR-STLAGHTG-YVSTVAVSPDGSLCASGGKDGV--VLLWDLAE-GK 594 (694)
T ss_dssp SSSCEEEEEE---TTSCEEEEETTTCCEE-EEECCCSS-CEEEEEECTTSSEEEEEETTSB--CEEEETTT-TE
T ss_pred CCcceEEEEe---CCCeEEEEECCCCcEE-EEEcCCCC-CEEEEEEeCCCCEEEEEeCCCe--EEEEECCC-Cc
Confidence 4222223321 1234555666543221 12332223 4778888753 56667777774 55668774 44
No 172
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.46 E-value=0.21 Score=50.69 Aligned_cols=199 Identities=11% Similarity=0.110 Sum_probs=108.5
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC----------CCeeccccC---CccceeEEccCC-eEEEEEECCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET----------GTPVGKPLV---GVTASVEWAGNE-ALVYITMDEI 257 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t----------g~~~~~~i~---~~~~~~~Ws~Dg-~l~Y~~~d~~ 257 (534)
.+..++++|++..+.++...+| .|+|+|+.+ ++.+. .+. .....++|+|++ .++.+...+
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg----~V~vwd~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~d- 203 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSS----DVLVFDYTKHPSKPEPSGECQPDL-RLRGHQKEGYGLSWNPNLNGYLLSASDD- 203 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSS----CEEEEEGGGSCSSCCTTCCCCCSE-EEECCSSCCCCEEECTTSTTEEEEECTT-
T ss_pred cEEEEEECCCCCcEEEEECCCC----cEEEEECCCcccccCccccCCCcE-EecCCCCCeEEEEeCCCCCCeEEEEeCC-
Confidence 3667899998554444444445 599999976 22221 111 122459999998 577776432
Q ss_pred CCCceEEEeecCCCCCCce-----EeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC---ceeEeeecc
Q 009441 258 LRPDKAWLHKLEADQSNDI-----CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRV 329 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~-----lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~---~~~~l~~~~ 329 (534)
..|..+++.+...... ..+.. .......+.+++++..+++.... ...|++.++.... ....+....
T Consensus 204 ---g~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 204 ---HTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD--DQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp ---SCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCSCSSSCSEEEECCS
T ss_pred ---CeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC--CCeEEEEECCCCCCCcceeEeecCC
Confidence 3577777765322111 12221 22234457889955544444332 3457778887642 122232222
Q ss_pred ccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC--EEEEEEeeCCeeEEEEEE
Q 009441 330 VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYR 406 (534)
Q Consensus 330 ~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~--~lv~~~~~~g~~~l~~~~ 406 (534)
.++. ..+.+.+..+++.... .+.|...++......-..+..... .+..+.+.++ ++++....+|. |.+++
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~----dg~v~vwd~~~~~~~~~~~~~h~~-~v~~i~~sp~~~~~l~s~~~d~~--i~iwd 350 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSA----DKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETILASSGTDRR--LHVWD 350 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEET----TSEEEEEETTCTTSCSEEEECCSS-CEEEEEECSSCTTEEEEEETTSC--CEEEE
T ss_pred CCeEEEEeCCCCCCEEEEEeC----CCeEEEEeCCCCCCCeEEeecCCC-CEEEEEECCCCCCEEEEEeCCCc--EEEEe
Confidence 2322 2356666666655543 246777777653221113332223 4888888753 57777777774 56667
Q ss_pred CCC
Q 009441 407 LPA 409 (534)
Q Consensus 407 l~~ 409 (534)
+..
T Consensus 351 ~~~ 353 (430)
T 2xyi_A 351 LSK 353 (430)
T ss_dssp GGG
T ss_pred CCC
Confidence 763
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.40 E-value=0.75 Score=44.35 Aligned_cols=203 Identities=6% Similarity=0.019 Sum_probs=106.5
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc---ccCC-ccceeEEccCCeEEEEEECC--CCCCceEEEe
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVG-VTASVEWAGNEALVYITMDE--ILRPDKAWLH 266 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~---~i~~-~~~~~~Ws~Dg~l~Y~~~d~--~~r~~~v~~~ 266 (534)
+..+.++|||++++.... ++.+...|+++|.++++.... ...+ ....+++++||.++++.... ......||++
T Consensus 89 ~~~i~~~~dg~l~v~~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~ 167 (333)
T 2dg1_A 89 PAAIKIHKDGRLFVCYLG-DFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYV 167 (333)
T ss_dssp EEEEEECTTSCEEEEECT-TSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEE
T ss_pred cceEEECCCCcEEEEeCC-CCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEE
Confidence 667889999986665433 222234789999998875321 1111 23458899999877766421 1123478888
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC-CCceeEe-----eeccc-ceeE--EEe
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK-PEELRVL-----TPRVV-GVDT--AAS 337 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~-~~~~~~l-----~~~~~-g~~~--~v~ 337 (534)
+..+.. -..+.... .....+.+++||++|++.... ...|++++.+. +..+..+ ..... +... .++
T Consensus 168 ~~~~~~--~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~--~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d 241 (333)
T 2dg1_A 168 SPDFRT--VTPIIQNI--SVANGIALSTDEKVLWVTETT--ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID 241 (333)
T ss_dssp CTTSCC--EEEEEEEE--SSEEEEEECTTSSEEEEEEGG--GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB
T ss_pred eCCCCE--EEEeecCC--CcccceEECCCCCEEEEEeCC--CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC
Confidence 765432 12222211 123357889999988775422 34678888753 2212211 11110 1111 233
Q ss_pred eeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCC-----ceeeeEEEeC--CEEEEEEeeCC---eeEEEEEEC
Q 009441 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-----VKLQDIQLFI--DHLAVYEREGG---LQKITTYRL 407 (534)
Q Consensus 338 ~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~-----~~l~~~~~~~--~~lv~~~~~~g---~~~l~~~~l 407 (534)
.+ +.+|+.+.. +.+|.+++.+. .. ...+..... ..+..+.+.+ +.|++....++ ...|+.++.
T Consensus 242 ~~-G~l~v~~~~----~~~v~~~d~~g-~~-~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 242 SD-DNLYVAMYG----QGRVLVFNKRG-YP-IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp TT-CCEEEEEET----TTEEEEECTTS-CE-EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred CC-CCEEEEEcC----CCEEEEECCCC-CE-EEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 43 457766542 24677777632 11 112222111 0355666654 47777766532 236777766
Q ss_pred CC
Q 009441 408 PA 409 (534)
Q Consensus 408 ~~ 409 (534)
..
T Consensus 315 ~~ 316 (333)
T 2dg1_A 315 FA 316 (333)
T ss_dssp SS
T ss_pred cc
Confidence 53
No 174
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.38 E-value=0.07 Score=54.43 Aligned_cols=116 Identities=9% Similarity=0.028 Sum_probs=68.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CCccceeEEccCC-eEEEEEECCCCCCceEEEeecCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
+..+.+||||++||.+.. + ..|+++|+.+.+...... .+....++|+|++ .++.+...+ ..|..+++.+
T Consensus 212 ~~~~~~~~~~~~l~~g~~-d----g~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d----~~v~iwd~~~ 282 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGDN-V----GNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD----QTVKIWDLRQ 282 (435)
T ss_dssp CCCEEEETTTTEEEEECS-S----SBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT----SBCCEEETTT
T ss_pred EEEEEECCCCCEEEEEeC-C----CcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCc----ceeeEEeccc
Confidence 456789999999987533 2 369999997654322111 2223458999998 677766432 2345556654
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
......++...........+.+++||++|+..+.+ ..|.+.++..+.
T Consensus 283 ~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D---~~i~iwd~~~~~ 329 (435)
T 4e54_B 283 VRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK---SEIRVYSASQWD 329 (435)
T ss_dssp CCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS---SCEEEEESSSSS
T ss_pred ccccceEEEeeeccccccceeECCCCCeeEEEcCC---CEEEEEECCCCc
Confidence 43222222222222233457789999998765432 346666776544
No 175
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.25 E-value=0.11 Score=51.43 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=47.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEE-EEEEECCCCCeeccc----cCCccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYT-VYVIDIETGTPVGKP----LVGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~-l~v~dl~tg~~~~~~----i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.|..+.|||||++||-+... .+ ++|+|+.+|+.+... -.+....++|+|||.++.+...+ ..|..+
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d----~~v~iw 267 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK----WTLHVF 267 (355)
T ss_dssp CEEEEEECTTSSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT----CEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC----CEEEEE
Confidence 47788999999999876442 34 999999999876521 12223459999999555555332 356666
Q ss_pred ecCC
Q 009441 267 KLEA 270 (534)
Q Consensus 267 ~lgt 270 (534)
++..
T Consensus 268 ~~~~ 271 (355)
T 3vu4_A 268 EIFN 271 (355)
T ss_dssp ESSC
T ss_pred EccC
Confidence 6644
No 176
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.24 E-value=0.04 Score=53.71 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=60.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
.+..+.+||||++||-+.. + .+|+|+|+.+++.+.. ........++|+||+.++....+. .+..+.+.+
T Consensus 198 ~v~~~~~sp~g~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-----~i~v~~~~~ 267 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGK-D----GEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-----GIKVFSLDP 267 (319)
T ss_dssp CEEEEEECTTSSEEEEEET-T----CEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-----EEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEeCc
Confidence 4677899999999997643 2 4799999999876542 122223459999999554554332 233333322
Q ss_pred CCCCceEeee---------ecCCceEEEEEEcCCCcEEEEEec
Q 009441 271 DQSNDICLYH---------EKDDIYSLGLQASESKKFLFIASE 304 (534)
Q Consensus 271 ~~~~d~lv~~---------e~d~~~~v~~~~S~Dg~~l~i~~~ 304 (534)
. .++.. .........+++||||++|+..+.
T Consensus 268 ~----~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 268 Q----YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp E----EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred C----eeeeccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 1 11110 011223456889999999876543
No 177
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.21 E-value=0.33 Score=46.55 Aligned_cols=150 Identities=10% Similarity=0.034 Sum_probs=80.1
Q ss_pred cEEEEEEEECCCCCEEEEEEcCCC------CeEEEEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCC
Q 009441 190 FYSVGCFQVSPDNKLVAYAEDTKG------DEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRP 260 (534)
Q Consensus 190 ~~~l~~~~~SPDG~~LA~~~d~~G------~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~ 260 (534)
...+..+.++|||++++-...... .....|+.+|.+ |+... ...+ ...+++|+||| .+|++... .
T Consensus 97 ~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~----~ 170 (297)
T 3g4e_A 97 NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSL----S 170 (297)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGG----G
T ss_pred CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEEEEecCC----C
Confidence 456788899999995543332211 123568888765 44322 1111 23569999999 55554321 2
Q ss_pred ceEEEeecC--CCCCCceEeeee-c-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-cce-eE
Q 009441 261 DKAWLHKLE--ADQSNDICLYHE-K-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGV-DT 334 (534)
Q Consensus 261 ~~v~~~~lg--t~~~~d~lv~~e-~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~-~~ 334 (534)
.+|+++++. ++......++.. . ....--++.++++|+.. +... ....|++++.++++ +....+.. ..+ ..
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw-va~~--~~~~v~~~d~~tG~-~~~~i~~p~~~~t~~ 246 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW-VACY--NGGRVIRLDPVTGK-RLQTVKLPVDKTTSC 246 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE-EEEE--TTTEEEEECTTTCC-EEEEEECSSSBEEEE
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE-EEEc--CCCEEEEEcCCCce-EEEEEECCCCCceEE
Confidence 478888763 322111122221 1 11222357788999643 3322 12468888887554 22222211 111 12
Q ss_pred EEe-eeCCEEEEEEcC
Q 009441 335 AAS-HRGNHFFITRRS 349 (534)
Q Consensus 335 ~v~-~~g~~lyi~tn~ 349 (534)
.+. ++++.||+.+..
T Consensus 247 ~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 247 CFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEESGGGCEEEEEEBC
T ss_pred EEeCCCCCEEEEEcCC
Confidence 354 677899998875
No 178
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.19 E-value=0.95 Score=43.45 Aligned_cols=194 Identities=7% Similarity=0.037 Sum_probs=102.6
Q ss_pred EEEEEEECCCCC-EEEEEEcCCCCeEEEEEEEEC-CCCCeeccc---cCCccceeEEccCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDI-ETGTPVGKP---LVGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~-~LA~~~d~~G~E~~~l~v~dl-~tg~~~~~~---i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.+..+.|+|||+ +|+.+.. +| .|+++|+ .+++..... .......++|++ +.++++...+ ..|+.+
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~-dg----~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d----~~i~iw 127 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTV-QG----EILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD----GLIEVI 127 (342)
T ss_dssp CEEEEEEEESSSEEEEEEET-TS----CEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT----SEEEEE
T ss_pred ceEEEEECCCCCcEEEEEcC-CC----eEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC----CeEEEE
Confidence 477789999999 8887654 33 6999999 888764321 222234589999 7444454322 356677
Q ss_pred ecCC---------CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC-CC-ceeEeee-ccccee-
Q 009441 267 KLEA---------DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK-PE-ELRVLTP-RVVGVD- 333 (534)
Q Consensus 267 ~lgt---------~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~-~~-~~~~l~~-~~~g~~- 333 (534)
++.+ ... ...+. .+.....+.+++++ +++... ...|++.++.. +. ....... ....+.
T Consensus 128 d~~~~~~~~~~~~~~~--~~~~~--~~~~v~~~~~~~~~--l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 198 (342)
T 1yfq_A 128 DPRNYGDGVIAVKNLN--SNNTK--VKNKIFTMDTNSSR--LIVGMN---NSQVQWFRLPLCEDDNGTIEESGLKYQIRD 198 (342)
T ss_dssp CHHHHTTBCEEEEESC--SSSSS--SCCCEEEEEECSSE--EEEEES---TTEEEEEESSCCTTCCCEEEECSCSSCEEE
T ss_pred cccccccccccccCCe--eeEEe--eCCceEEEEecCCc--EEEEeC---CCeEEEEECCccccccceeeecCCCCceeE
Confidence 6644 210 11122 22233457788887 443322 23577888876 43 2222221 111122
Q ss_pred EEEee-eCCEEEEEEcCCCCCccEEEEEeCCCC-----CCceEEecCC-C-------CceeeeEEEeC-CEEEEEEeeCC
Q 009441 334 TAASH-RGNHFFITRRSDELFNSELLACPVDNT-----SETTVLIPHR-E-------SVKLQDIQLFI-DHLAVYEREGG 398 (534)
Q Consensus 334 ~~v~~-~g~~lyi~tn~~~~~~~~L~~~~~~~~-----~~~~~li~~~-~-------~~~l~~~~~~~-~~lv~~~~~~g 398 (534)
..+.+ ++..|+..+.. +.+...+++.. ......+... . ...+..+.+.+ +.+++....+|
T Consensus 199 i~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 273 (342)
T 1yfq_A 199 VALLPKEQEGYACSSID-----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG 273 (342)
T ss_dssp EEECSGGGCEEEEEETT-----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS
T ss_pred EEECCCCCCEEEEEecC-----CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc
Confidence 23556 66665554432 34444444332 1112222222 1 12477788765 34556666666
Q ss_pred eeEEEEEECCCCCC
Q 009441 399 LQKITTYRLPAVGE 412 (534)
Q Consensus 399 ~~~l~~~~l~~~g~ 412 (534)
.|+++++.. ++
T Consensus 274 --~i~vwd~~~-~~ 284 (342)
T 1yfq_A 274 --IISCWNLQT-RK 284 (342)
T ss_dssp --CEEEEETTT-TE
T ss_pred --eEEEEcCcc-Hh
Confidence 477778874 44
No 179
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.18 E-value=0.71 Score=43.64 Aligned_cols=188 Identities=13% Similarity=0.149 Sum_probs=101.4
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC-ccc-eeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VTA-SVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~-~~~-~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.++.++ || .|-.+.-..| ...|+++|+++|+.+.. .++. .++ +++. ++ .+|-.. ++..+++.++..
T Consensus 46 qGL~~~-~~-~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~lt----w~~~~v~v~D~~ 115 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGLNG--RSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLT----WKNGLGFVWNIR 115 (262)
T ss_dssp EEEEEE-TT-EEEEEEEETT--EEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEE----SSSSEEEEEETT
T ss_pred ceEEEE-CC-EEEEECCCCC--CceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEE----eeCCEEEEEECc
Confidence 445677 55 4444332223 57899999999998763 3333 232 2443 45 665554 345689998987
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee----EEEeeeCCEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD----TAASHRGNHFFI 345 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~----~~v~~~g~~lyi 345 (534)
+.....++-++ ..+ ..++.||+.|+++ + .++.|+.+|.++.+....+.-..+|.. ..++..++.+|+
T Consensus 116 t~~~~~ti~~~--~eG----~glt~dg~~L~~S-d--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lya 186 (262)
T 3nol_A 116 NLRQVRSFNYD--GEG----WGLTHNDQYLIMS-D--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFA 186 (262)
T ss_dssp TCCEEEEEECS--SCC----CCEEECSSCEEEC-C--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred cCcEEEEEECC--CCc----eEEecCCCEEEEE-C--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEE
Confidence 65321121121 122 3456788887763 2 257899999887651222211111211 123334678885
Q ss_pred EEcCCCCCccEEEEEeCCCCCCceEE-----ecC-----CCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEE
Q 009441 346 TRRSDELFNSELLACPVDNTSETTVL-----IPH-----RESVKLQDIQLFI--DHLAVYEREGGLQKITTYR 406 (534)
Q Consensus 346 ~tn~~~~~~~~L~~~~~~~~~~~~~l-----i~~-----~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~ 406 (534)
..-. ...|+++|.++.....|+ .+. .....+-++.+.+ +.|++....= ++++.+.
T Consensus 187 n~w~----~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W--p~~~ev~ 253 (262)
T 3nol_A 187 NVWQ----TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW--PKVFEIT 253 (262)
T ss_dssp EETT----SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC--SEEEEEE
T ss_pred EEcc----CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC--CceEEEE
Confidence 4422 247999998776543441 111 1122477787764 5666665432 3454443
No 180
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.42 Score=52.69 Aligned_cols=196 Identities=13% Similarity=0.134 Sum_probs=103.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC--CeeccccC---CccceeEEccC--CeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--TPVGKPLV---GVTASVEWAGN--EALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg--~~~~~~i~---~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+.|||||++||.+.. +| +|+|+|+.++ +.+. .+. +....++|+++ +.++.+...+ ..|+
T Consensus 11 ~V~~l~~s~dg~~latg~~-dg----~I~vwd~~~~~~~~~~-~l~~h~~~V~~l~~s~~~~~~~l~s~s~D----g~I~ 80 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSS-DK----TIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYD----GKVL 80 (753)
T ss_dssp CEEEECCCSSSCCEEEEET-TT----EEEEEEEETTEEEEEE-EECCCSSCEEEEEECCTTSCSEEEEEETT----SCEE
T ss_pred eeEEEEECCCCCeEEEEEC-CC----cEEEEecCCCCCccce-eccCCcCceEEEEecCCCCCCEEEEEeCC----CeEE
Confidence 4677899999999988754 33 6999998744 3322 222 22345899987 6555665432 2566
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEEcCC--CcEEEEEecCcceeEEEEEeCCCCC--ceeEeeeccccee-EEEee-
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVD-TAASH- 338 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~D--g~~l~i~~~~~~~~ev~~~d~~~~~--~~~~l~~~~~g~~-~~v~~- 338 (534)
.+++.++.......+.. .......+.++++ +++++..+.+ ..|.+.++..+. ....+......+. ..+.+
T Consensus 81 vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~d---g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred EEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeCC---CcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 66665542111222222 2233445788999 8887765433 356777776653 1222222222221 12334
Q ss_pred ------------eCCEEEEEEcCCCCCccEEEEEeCCCCCCc-eE--EecCCCCceeeeEEEeCC----EEEEEEeeCCe
Q 009441 339 ------------RGNHFFITRRSDELFNSELLACPVDNTSET-TV--LIPHRESVKLQDIQLFID----HLAVYEREGGL 399 (534)
Q Consensus 339 ------------~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~-~~--li~~~~~~~l~~~~~~~~----~lv~~~~~~g~ 399 (534)
++..|+..+. + +.|...++...... .. .+... ...+..+.+.++ .+++....+|.
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~-d----g~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGA-D----NLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp C---------CGGGCCEEEEET-T----SCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred ccccccccccCCCCCEEEEEEC-C----CeEEEEeccCCcccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 2444444333 2 23444444332211 11 22222 234778888654 67777777774
Q ss_pred eEEEEEECCC
Q 009441 400 QKITTYRLPA 409 (534)
Q Consensus 400 ~~l~~~~l~~ 409 (534)
|.++++..
T Consensus 231 --I~iwd~~~ 238 (753)
T 3jro_A 231 --CIIWTQDN 238 (753)
T ss_dssp --EEEEEESS
T ss_pred --EEEecCCC
Confidence 55666664
No 181
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.55 Score=52.99 Aligned_cols=111 Identities=12% Similarity=0.089 Sum_probs=71.8
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC--CccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV--GVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~--~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..++|||||++||.+... .+|+|+|..+++.+.. .. .....++|+| |.++.+...+ ..|..+++.
T Consensus 19 ~V~~lafspdg~~lAsgs~D-----g~I~lw~~~~~~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~D----~~v~lWd~~ 87 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVT-----GEVHIYGQQQVEVVIK-LEDRSAIKEMRFVK-GIYLVVINAK----DTVYVLSLY 87 (902)
T ss_dssp CEEEEEEETTTTEEEEEETT-----SEEEEECSTTCEEEEE-CSSCCCEEEEEEET-TTEEEEEETT----CEEEEEETT
T ss_pred CcEEEEECCCCCEEEEEeCC-----CEEEEEeCCCcEEEEE-cCCCCCEEEEEEcC-CCEEEEEECc----CeEEEEECC
Confidence 47788999999999987653 3799999988765432 22 2234599999 7544444322 367778887
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
++. -...+. .+.....+.++||+++|+....+ ..|.+.++.+..
T Consensus 88 ~~~--~~~~~~--~~~~V~~v~~sp~g~~l~sgs~d---g~V~lwd~~~~~ 131 (902)
T 2oaj_A 88 SQK--VLTTVF--VPGKITSIDTDASLDWMLIGLQN---GSMIVYDIDRDQ 131 (902)
T ss_dssp TCS--EEEEEE--CSSCEEEEECCTTCSEEEEEETT---SCEEEEETTTTE
T ss_pred CCc--EEEEEc--CCCCEEEEEECCCCCEEEEEcCC---CcEEEEECCCCc
Confidence 652 122232 22334467899999998876543 346777776643
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.08 E-value=1.2 Score=43.41 Aligned_cols=228 Identities=6% Similarity=-0.018 Sum_probs=119.4
Q ss_pred EEEEcCC--CCeEEEEEEEECCCCCeeccc--------cCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCc
Q 009441 206 AYAEDTK--GDEIYTVYVIDIETGTPVGKP--------LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSND 275 (534)
Q Consensus 206 A~~~d~~--G~E~~~l~v~dl~tg~~~~~~--------i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d 275 (534)
+|.+..+ |++...|.++|.++++..... +......+... ++.+|.+... ...|...+..+....
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~----~~~v~viD~~t~~~~- 77 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNN----SHVIFAIDINTFKEV- 77 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGG----GTEEEEEETTTCCEE-
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcC----CCEEEEEECcccEEE-
Confidence 4555655 556678999999999876421 11112234442 3366555432 246888887765321
Q ss_pred eEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc------ceeEEEeeeCCEEEEEEcC
Q 009441 276 ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV------GVDTAASHRGNHFFITRRS 349 (534)
Q Consensus 276 ~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~------g~~~~v~~~g~~lyi~tn~ 349 (534)
-.+.... .-..+.+++|| .+++... ....|+++|+.+.+ .....+... ... .+..+++++|+...
T Consensus 78 -~~i~~~~--~p~~i~~~~~g-~lyv~~~--~~~~v~~iD~~t~~-~~~~i~~g~~~~~~~~p~-~i~~~~~~lyv~~~- 148 (328)
T 3dsm_A 78 -GRITGFT--SPRYIHFLSDE-KAYVTQI--WDYRIFIINPKTYE-ITGYIECPDMDMESGSTE-QMVQYGKYVYVNCW- 148 (328)
T ss_dssp -EEEECCS--SEEEEEEEETT-EEEEEEB--SCSEEEEEETTTTE-EEEEEECTTCCTTTCBCC-CEEEETTEEEEEEC-
T ss_pred -EEcCCCC--CCcEEEEeCCC-eEEEEEC--CCCeEEEEECCCCe-EEEEEEcCCccccCCCcc-eEEEECCEEEEEcC-
Confidence 1122111 12235677888 5555432 24678999988754 221122111 111 12236888887643
Q ss_pred CCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCC--------eeEEEEEECCCCCCcccccCCC
Q 009441 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGG--------LQKITTYRLPAVGEPLKSLQGG 420 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g--------~~~l~~~~l~~~g~~~~~~~~~ 420 (534)
+ ....|..+|+++... .+.++... ...++.+.+ +.+++....+. ...|++++..+ ++..
T Consensus 149 -~-~~~~v~viD~~t~~~-~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~------ 216 (328)
T 3dsm_A 149 -S-YQNRILKIDTETDKV-VDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVE------ 216 (328)
T ss_dssp -T-TCCEEEEEETTTTEE-EEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEE------
T ss_pred -C-CCCEEEEEECCCCeE-EEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEE------
Confidence 1 135788899865432 12333321 244555554 56666654320 25799999874 4421
Q ss_pred ceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 421 KSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 421 ~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
+.+.++.... ...+..+.+++.+++. .+ .++.+|+++++.
T Consensus 217 ~~~~~~~g~~-p~~la~~~d~~~lyv~-~~-----~v~~~d~~t~~~ 256 (328)
T 3dsm_A 217 KQFKFKLGDW-PSEVQLNGTRDTLYWI-NN-----DIWRMPVEADRV 256 (328)
T ss_dssp EEEECCTTCC-CEEEEECTTSCEEEEE-SS-----SEEEEETTCSSC
T ss_pred EEEecCCCCC-ceeEEEecCCCEEEEE-cc-----EEEEEECCCCce
Confidence 2444432110 1111223456666654 22 799999988774
No 183
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.98 E-value=1.4 Score=43.35 Aligned_cols=190 Identities=10% Similarity=0.111 Sum_probs=100.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..++|||||++||.+.+. .++|+|+++++.+.. ...++ ..++|++++ .++.+...+ ..|..+++.
T Consensus 21 ~V~~v~fs~dg~~la~g~~~------~~~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d----~~v~iWd~~ 89 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLK------SFEIYNVHPVAHIMSQEMRHL-SKVRMLHRTNYVAFVTGVK----EVVHIWDDV 89 (355)
T ss_dssp CCCEEEECTTSSEEEEECSS------EEEEEEETTEEEEEEEECSCC-CEEEECTTSSEEEEECSST----TEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCC------EEEEEecCCcceeeeeecCCe-EEEEEcCCCCEEEEEECCc----cEEEEEECC
Confidence 36678999999999976432 257899888765432 22233 347888887 555554322 377778876
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCC-CceeEeeecccceeEEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP-EELRVLTPRVVGVDTAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~-~~~~~l~~~~~g~~~~v~~~g~~lyi~tn 348 (534)
++. ....++ .+.-...+.+++++ +++.. ...+++.++.+. ..+..+.. ..+ ...+++ ..+.+.+.
T Consensus 90 ~~~--~~~~~~--~~~~v~~v~~~~~~--~~~~~----~~~i~i~d~~~~~~~~~~~~~-~~~-~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 90 KKQ--DVSRIK--VDAPVKDLFLSREF--IVVSY----GDVISVFKFGNPWKRITDDIR-FGG-VCEFSN--GLLVYSNE 155 (355)
T ss_dssp TTE--EEEEEE--CSSCEEEEEECSSE--EEEEE----TTEEEEEESSTTCCBSSCCEE-EEE-EEEEET--TEEEEEES
T ss_pred CCc--EEEEEE--CCCceEEEEEcCCE--EEEEE----cCEEEEEECCCCceeeEEecc-CCc-eEEEEc--cEEEEeCC
Confidence 542 122222 22223345666654 33322 235788888775 31222211 112 122333 44444322
Q ss_pred CCCCCccEEEEEeCCCCCC--------------c-eEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCCCC
Q 009441 349 SDELFNSELLACPVDNTSE--------------T-TVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~--------------~-~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
. ..+.|...++.+... . .-.+....+ .+..+.+.++ .+++....+|. .|.++++.+ |+
T Consensus 156 ~---~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~-~v~~~~~s~~g~~l~s~s~d~~-~v~iwd~~~-~~ 229 (355)
T 3vu4_A 156 F---NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN-PIKMVRLNRKSDMVATCSQDGT-IIRVFKTED-GV 229 (355)
T ss_dssp S---CTTCEEEEECCC------------------CCEEECCCSS-CEEEEEECTTSSEEEEEETTCS-EEEEEETTT-CC
T ss_pred C---cCcEEEEEECCCCCccccccccccccccCcccEEEEccCC-ceEEEEECCCCCEEEEEeCCCC-EEEEEECCC-Cc
Confidence 2 234566666654220 0 112332323 4788888754 56777777773 156668875 55
No 184
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.96 E-value=1.1 Score=42.19 Aligned_cols=213 Identities=12% Similarity=0.151 Sum_probs=118.7
Q ss_pred CceEEeecchhcCCCCcEEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCc--cceeEEccCCeEE
Q 009441 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV--TASVEWAGNEALV 250 (534)
Q Consensus 174 ~eevllD~n~~a~~~~~~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~--~~~~~Ws~Dg~l~ 250 (534)
.-++.++.-.+..-.+ .++++.++||++.|....+.. ..|+.+|+. |+.+.. .+.+. ..++++.++|. |
T Consensus 12 ~y~~~~~~~~l~g~~~--~lSGla~~~~~~~L~aV~d~~----~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~ 83 (255)
T 3qqz_A 12 NYHATIDGKEIAGITN--NISSLTWSAQSNTLFSTINKP----AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-F 83 (255)
T ss_dssp TCEEEEEEEECTTCCS--CEEEEEEETTTTEEEEEEETT----EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-E
T ss_pred ceEEEEeceECCCccc--CcceeEEeCCCCEEEEEECCC----CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-E
Confidence 3466666333432112 488899999988877777753 469999998 877653 23332 45799988775 4
Q ss_pred EEEECCCCCCceEEEeecCCCCCCceEeee--------ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeC--CCCC
Q 009441 251 YITMDEILRPDKAWLHKLEADQSNDICLYH--------EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV--SKPE 320 (534)
Q Consensus 251 Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~--------e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~--~~~~ 320 (534)
+++.. +..+++.+.++.... -..+-. ..+.+ +-+++++++++.|++..... ...+|.++. ...
T Consensus 84 ~vs~E---~~~~l~~~~v~~~~~-i~~~~~~~~~~~~~~~N~g-~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~- 156 (255)
T 3qqz_A 84 VISDE---RDYAIYVISLTPNSE-VKILKKIKIPLQESPTNCG-FEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSN- 156 (255)
T ss_dssp EEEET---TTTEEEEEEECTTCC-EEEEEEEECCCSSCCCSSC-CEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSS-
T ss_pred EEEEC---CCCcEEEEEcCCCCe-eeeeeeeccccccccccCC-cceEEEeCCCCEEEEEECcC-CceEEEEcccccCC-
Confidence 45433 236788887765431 011111 11222 23688999998887754333 346777762 111
Q ss_pred ceeEeee----c---ccce-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC------CCceeeeEEEe
Q 009441 321 ELRVLTP----R---VVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR------ESVKLQDIQLF 386 (534)
Q Consensus 321 ~~~~l~~----~---~~g~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~------~~~~l~~~~~~ 386 (534)
.+..+.. . ..+. ...+++..++||+++... ..|+.+|....-...+-+... .-.+-+++.+.
T Consensus 157 ~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s----~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d 232 (255)
T 3qqz_A 157 ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES----RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMD 232 (255)
T ss_dssp CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT----TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEEC
T ss_pred ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC----CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEEC
Confidence 1222211 0 0011 123567788999999752 578888875321112222211 11257889887
Q ss_pred C-CEEEEEEeeCCeeEEEEEECC
Q 009441 387 I-DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 387 ~-~~lv~~~~~~g~~~l~~~~l~ 408 (534)
+ +.||+....| .+|++...
T Consensus 233 ~~G~lyIvsE~n---~~y~f~~~ 252 (255)
T 3qqz_A 233 ASGNIYIVSEPN---RFYRFTPQ 252 (255)
T ss_dssp TTCCEEEEETTT---EEEEEEC-
T ss_pred CCCCEEEEcCCc---eEEEEEec
Confidence 5 4566663322 67777543
No 185
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.94 E-value=0.13 Score=50.42 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=60.6
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC-Ceecc-ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG-TPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg-~~~~~-~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.|||||++||-+.. + ..|+|+|+.+. ..... ........++|+|++.++....+. .|..+++.
T Consensus 215 ~v~~~~~s~~g~~l~sgs~-d----g~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~-----~v~iw~~~ 284 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGK-D----KKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQ-----GVKIFNLM 284 (343)
T ss_dssp CEEEEEECTTSSEEEEEET-T----CEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESS-----CEEEEESS
T ss_pred cceEEEECCCCCEEEEEcC-C----CeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCC-----CEEEEEeC
Confidence 4677899999999987643 2 47999999543 32221 112223569999999555455442 35556665
Q ss_pred CCCCCceEeeee----------cCCceEEEEEEcCCCcEEEEEec
Q 009441 270 ADQSNDICLYHE----------KDDIYSLGLQASESKKFLFIASE 304 (534)
Q Consensus 270 t~~~~d~lv~~e----------~d~~~~v~~~~S~Dg~~l~i~~~ 304 (534)
+........+.. ........++++|||++|+..+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~ 329 (343)
T 2xzm_R 285 TQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT 329 (343)
T ss_dssp SCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET
T ss_pred CCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC
Confidence 443222112210 11223446889999999876543
No 186
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.93 E-value=1.4 Score=43.23 Aligned_cols=198 Identities=13% Similarity=0.046 Sum_probs=100.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC------eeccccC---CccceeEEccC----C---eEEEEEEC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT------PVGKPLV---GVTASVEWAGN----E---ALVYITMD 255 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~------~~~~~i~---~~~~~~~Ws~D----g---~l~Y~~~d 255 (534)
.|..+.|+| ++||.+.. +| .|+|+|+.+++ .+. .+. .....++|+++ | .++++...
T Consensus 18 ~i~~~~~~~--~~l~s~~~-dg----~i~iw~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSG-DG----YLKVWDNKLLDNENPKDKSY-SHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp CEEEEEECS--SEEEEEET-TS----EEEEEESBCCTTCCGGGGEE-EEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred CeEEEEecC--CeEEEEcC-CC----EEEEEECCCcccccCCCcce-EEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 466778898 67766543 33 79999999987 222 121 22345899999 8 77777643
Q ss_pred CCCCCceEEEeecCCCCCCc---eEeeeecC----CceEEEEEEc----CCCcE-EEEEecCcceeEEEEEeCCC-----
Q 009441 256 EILRPDKAWLHKLEADQSND---ICLYHEKD----DIYSLGLQAS----ESKKF-LFIASESKITRFVFYLDVSK----- 318 (534)
Q Consensus 256 ~~~r~~~v~~~~lgt~~~~d---~lv~~e~d----~~~~v~~~~S----~Dg~~-l~i~~~~~~~~ev~~~d~~~----- 318 (534)
+ ..|+.+++.+..... ...+.... ......+.++ +++++ |+....+ ..|++.++..
T Consensus 90 d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 90 S----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADES 162 (397)
T ss_dssp T----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHH
T ss_pred C----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCcccccc
Confidence 2 356666665543211 11222211 1334467888 99999 6554332 2355555544
Q ss_pred -CCcee-----Eeee-------ccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecC---C--CCce
Q 009441 319 -PEELR-----VLTP-------RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH---R--ESVK 379 (534)
Q Consensus 319 -~~~~~-----~l~~-------~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~---~--~~~~ 379 (534)
..... .+.. ....+. ..+.+++ +++... .++.|...++.+... ...+.. . ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~----~dg~i~i~d~~~~~~-~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGF----NNGTVQISELSTLRP-LYNFESQHSMINNSNS 235 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEEC----TTSEEEEEETTTTEE-EEEEECCC---CCCCC
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEe----CCCcEEEEECCCCce-eEEEeccccccccCCc
Confidence 22121 2211 111111 2255555 333332 235677777764321 123332 1 0234
Q ss_pred eeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 380 LQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 380 l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
+..+.+.. ..|+.....++...|.++++.. ++
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~ 269 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GE 269 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CC
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCC-Cc
Confidence 77888764 3555444443335788889875 44
No 187
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.88 E-value=1.3 Score=42.18 Aligned_cols=114 Identities=16% Similarity=0.156 Sum_probs=66.2
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCC--CeeccccCC---ccceeEEccC--CeEEEEEECCCCCCceEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--TPVGKPLVG---VTASVEWAGN--EALVYITMDEILRPDKAW 264 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg--~~~~~~i~~---~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v~ 264 (534)
.|..+.+||||++||-+.. + .+|+|+|++++ +.+. .+.+ ....++|+++ |.++.+...+ ..|.
T Consensus 11 ~V~~~~~s~~g~~las~s~-D----~~v~iw~~~~~~~~~~~-~l~gH~~~V~~v~~s~~~~g~~l~s~s~D----~~v~ 80 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSS-D----KTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYD----GKVM 80 (297)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SCEEEEEBCSSCBCCCE-EECCCSSCEEEEEECCGGGCSEEEEEETT----TEEE
T ss_pred ceEEEEECCCCCEEEEEeC-C----CEEEEEecCCCCcEEEE-EEccccCCeEEEEecCCCcCCEEEEEcCC----CEEE
Confidence 3667789999999997654 2 36999999754 3222 2322 2345899864 5666665432 3567
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEEcCC--CcEEEEEecCcceeEEEEEeCCCC
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIASESKITRFVFYLDVSKP 319 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~D--g~~l~i~~~~~~~~ev~~~d~~~~ 319 (534)
.+++.++.......+.. .......+.++|+ |++|+..+.+ ..|.+.++...
T Consensus 81 iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s~d---~~v~~wd~~~~ 133 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVASSD---GKVSVVEFKEN 133 (297)
T ss_dssp EEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETT---SEEEEEEBCSS
T ss_pred EEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEECC---CcEEEEEecCC
Confidence 77776542122222322 1223345788887 7777654432 34566666543
No 188
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=95.80 E-value=0.0082 Score=59.29 Aligned_cols=86 Identities=8% Similarity=-0.100 Sum_probs=48.8
Q ss_pred CccEEEEEeccCCCCCeEEEEECCCCcEEEEE-EccccCCCCC---CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCC
Q 009441 440 SSRILRFHYSSLRTPPSVYDYDMDMGISVLKK-IETVLGGFDT---NNYFTERKWASASDGTQIPICIVYRKNLVKLDGS 515 (534)
Q Consensus 440 ~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~-~~~~~~~~d~---~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~ 515 (534)
+++.+.+.+.+++.|...++++. +|+...+. ....+...++ ..+.++.+.+.+ |..+++.|+.|++....+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~ 82 (338)
T 2o7r_A 6 LETTGSSDPNTNLLKYLPIVLNP-DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYNSAK 82 (338)
T ss_dssp ------------CTTTCSCEECT-TSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGSSCC
T ss_pred CCCceeeccCcccccccceEECC-CCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcCCCC
Confidence 45678888999999988888875 56544321 1122222333 457788998875 77788888888752013578
Q ss_pred CcEEEEEcCCCCc
Q 009441 516 DPLLLYGYGSYEV 528 (534)
Q Consensus 516 ~P~lL~gYGgyg~ 528 (534)
.|+||+.|||...
T Consensus 83 ~p~vv~~HGgg~~ 95 (338)
T 2o7r_A 83 LPLVVYFHGGGFI 95 (338)
T ss_dssp EEEEEEECCSTTT
T ss_pred ceEEEEEcCCcCc
Confidence 8999999998744
No 189
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.78 E-value=1.9 Score=43.58 Aligned_cols=235 Identities=13% Similarity=0.089 Sum_probs=117.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEc--cCCeEEEEEECCCCCCceEEEe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWA--GNEALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws--~Dg~l~Y~~~d~~~r~~~v~~~ 266 (534)
.|..+.++|++ +|+- .+.+| +|+++|+.+|+.+.. +. .....++|+ +++.++++...+ ..|..+
T Consensus 164 ~V~~l~~~~~~-~l~s-~s~dg----~i~vwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~~l~s~s~d----~~i~vw 232 (464)
T 3v7d_B 164 GVWALKYAHGG-ILVS-GSTDR----TVRVWDIKKGCCTHV-FEGHNSTVRCLDIVEYKNIKYIVTGSRD----NTLHVW 232 (464)
T ss_dssp CEEEEEECSTT-EEEE-EETTS----CEEEEETTTTEEEEE-ECCCSSCEEEEEEEESSSCEEEEEEETT----SCEEEE
T ss_pred CEEEEEEcCCC-EEEE-EeCCC----CEEEEECCCCcEEEE-ECCCCCccEEEEEecCCCCCEEEEEcCC----CcEEEe
Confidence 46778899999 4443 33344 699999999976542 22 223447777 455555665432 245555
Q ss_pred ecCCCCCCc--------eEeee------------ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEee
Q 009441 267 KLEADQSND--------ICLYH------------EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT 326 (534)
Q Consensus 267 ~lgt~~~~d--------~lv~~------------e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~ 326 (534)
++.+..... ..++. ....... ..+++++++++....+ ..|.+.|+.++.....+.
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYD---NTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETT---SCEEEEETTTTEEEEEEC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEEec
Confidence 654432110 00110 0001111 1346788887765543 357777887654122222
Q ss_pred eccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEE
Q 009441 327 PRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 405 (534)
Q Consensus 327 ~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~ 405 (534)
.....+. ..+++++..++..+.. +.|...++.+... ...+..... .+..+.+.++. ++....+| .|.++
T Consensus 308 ~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~-~~~~~~h~~-~v~~~~~~~~~-l~s~s~dg--~v~vw 377 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGEL-MYTLQGHTA-LVGLLRLSDKF-LVSAAADG--SIRGW 377 (464)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEE-EEEECCCSS-CEEEEEECSSE-EEEEETTS--EEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcE-EEEEeCCCC-cEEEEEEcCCE-EEEEeCCC--cEEEE
Confidence 2222222 2256667766554432 3466667654321 113332222 46677766554 55555666 46777
Q ss_pred ECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 406 RLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 406 ~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
++.. +... ...........+ ....++. +.++ .+ -+.+..||+.+++.
T Consensus 378 d~~~-~~~~------~~~~~~~~~~~~---~~~~~~~-~l~~-~~---dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 378 DAND-YSRK------FSYHHTNLSAIT---TFYVSDN-ILVS-GS---ENQFNIYNLRSGKL 424 (464)
T ss_dssp ETTT-CCEE------EEEECTTCCCEE---EEEECSS-EEEE-EE---TTEEEEEETTTCCE
T ss_pred ECCC-Ccee------eeecCCCCccEE---EEEeCCC-EEEE-ec---CCeEEEEECCCCcE
Confidence 8874 3311 111111111111 1122333 3333 22 36899999998874
No 190
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.77 E-value=0.82 Score=45.67 Aligned_cols=60 Identities=18% Similarity=0.090 Sum_probs=43.3
Q ss_pred EEEECCCCCEEEEEEc-----CCCCeEEEEEEEECCCCCeecc-ccC--------CccceeEEccCCeEEEEEE
Q 009441 195 CFQVSPDNKLVAYAED-----TKGDEIYTVYVIDIETGTPVGK-PLV--------GVTASVEWAGNEALVYITM 254 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d-----~~G~E~~~l~v~dl~tg~~~~~-~i~--------~~~~~~~Ws~Dg~l~Y~~~ 254 (534)
++.+||||++|..+-. ..|...-.|.++|+.+++.+.. .++ ..-.+++++|||+.+|+.+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEc
Confidence 5899999999888753 2345567899999999998763 232 1134699999995556553
No 191
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.63 E-value=2.1 Score=42.86 Aligned_cols=198 Identities=10% Similarity=0.057 Sum_probs=115.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
..++.|++.++.|.++ |..+. .|+.++++++........+ ...+++..+.+ .||++-. ...+|++.++.
T Consensus 118 ~~gl~~d~~~~~ly~~-D~~~~---~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~----~~~~I~~~~~d 189 (386)
T 3v65_B 118 AIALDFHHRRELVFWS-DVTLD---RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS----GTSRIEVANLD 189 (386)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET----TTTEEEECBTT
T ss_pred cEEEEEecCCCeEEEE-eCCCC---cEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC----CCCeEEEEeCC
Confidence 5567899888877665 44333 6888898876532211111 12457777666 6666532 13478887775
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITR 347 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~lyi~t 347 (534)
... .+.+... +-..--++++.|++.+|+++-.. ....|+.+++++.. .+.+....-..- ..+++.++.||+.-
T Consensus 190 g~~--~~~l~~~-~l~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 190 GAH--RKVLLWQ-SLEKPRAIALHPMEGTIYWTDWG-NTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp SCS--CEEEECS-SCSCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred CCc--eEEeecC-CCCCCcEEEEEcCCCeEEEeccC-CCCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 432 2333322 11112356788888888876432 24679999987643 333332211111 23666789998864
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
. .+.+|.+++++... ...++... .....++.++++.||+....++ +|.+++..+ |+
T Consensus 265 ~----~~~~I~~~d~dG~~-~~~~~~~~-~~~P~giav~~~~ly~td~~~~--~V~~~~~~~-G~ 320 (386)
T 3v65_B 265 A----KHHVIERANLDGSH-RKAVISQG-LPHPFAITVFEDSLYWTDWHTK--SINSANKFT-GK 320 (386)
T ss_dssp T----TTTEEEEECTTSCS-CEEEECSS-CSSEEEEEEETTEEEEEETTTT--EEEEEETTT-CC
T ss_pred C----CCCEEEEEeCCCCe-eEEEEECC-CCCceEEEEECCEEEEeeCCCC--eEEEEECCC-Cc
Confidence 3 34689999886432 22244333 2246788888899988875443 688887443 55
No 192
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.59 E-value=0.04 Score=55.21 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=62.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-----C---CccceeEEccCCeEEEEEECCCCCCce
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-----V---GVTASVEWAGNEALVYITMDEILRPDK 262 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-----~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~ 262 (534)
.|..+.|||||++||-+.+ + .+|+|+|+.+|+.+.. .. . .....++|+|+|.++++...+ ..
T Consensus 251 ~v~~v~~~p~~~~l~s~s~-D----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----g~ 321 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSD-D----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----GD 321 (380)
T ss_dssp CCCEEEECTTSSEEEEECS-S----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT----SC
T ss_pred CeEEEEEecCCCeEEEEcC-C----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC----CC
Confidence 4677899999999886533 2 4699999999876531 00 0 113458999999776776432 35
Q ss_pred EEEeecCCCCCCceEeee---ecCCceEEEEEEcCCCcEEEEE
Q 009441 263 AWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKFLFIA 302 (534)
Q Consensus 263 v~~~~lgt~~~~d~lv~~---e~d~~~~v~~~~S~Dg~~l~i~ 302 (534)
|+.+++.++. ....+. .........+.+++||++|+..
T Consensus 322 i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 322 CYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp EEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 7777765442 111121 1122233357899999987643
No 193
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.58 E-value=1.8 Score=41.73 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=49.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCccceeEE--ccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEW--AGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~W--s~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.|..+.|||||++||.+.. +| .|+++|+.+++.+.. ........+.| ++++.++++...+ ..|+.+++
T Consensus 88 ~v~~~~~~~~~~~l~s~~~-dg----~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d----g~i~vwd~ 158 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASC-DK----TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD----KTLKFWDT 158 (368)
T ss_dssp CEEEEEECTTSSEEEEEET-TS----EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETT----SEEEEECS
T ss_pred CEEEEEECcCCCEEEEEcC-CC----cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCC----CcEEEEEC
Confidence 4778899999999996643 33 799999999986642 12223345899 7888655665432 36788887
Q ss_pred CCC
Q 009441 269 EAD 271 (534)
Q Consensus 269 gt~ 271 (534)
.+.
T Consensus 159 ~~~ 161 (368)
T 3mmy_A 159 RSS 161 (368)
T ss_dssp SCS
T ss_pred CCC
Confidence 665
No 194
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.58 E-value=1.8 Score=41.90 Aligned_cols=163 Identities=8% Similarity=0.030 Sum_probs=85.6
Q ss_pred cEEEEEEEECCCCCEEEEEEcCCC-CeEEEEEEEECCCCCeeccccC--CccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 190 FYSVGCFQVSPDNKLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPLV--GVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 190 ~~~l~~~~~SPDG~~LA~~~d~~G-~E~~~l~v~dl~tg~~~~~~i~--~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
...+..+.++|||++++-...... .....|+.+| +|+.... .. ....+++|++|| .+|++.. ...+|++
T Consensus 133 ~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~-~~~~~~~~~i~~s~dg~~lyv~~~----~~~~I~~ 205 (326)
T 2ghs_A 133 GNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL-FADISIPNSICFSPDGTTGYFVDT----KVNRLMR 205 (326)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE-EEEESSEEEEEECTTSCEEEEEET----TTCEEEE
T ss_pred CCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe-eCCCcccCCeEEcCCCCEEEEEEC----CCCEEEE
Confidence 356788899999995443222110 1135688888 4654321 11 123468999999 5666532 1347888
Q ss_pred eecC--CC-CCCceEeeee-c-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEe-e
Q 009441 266 HKLE--AD-QSNDICLYHE-K-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAAS-H 338 (534)
Q Consensus 266 ~~lg--t~-~~~d~lv~~e-~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~-~ 338 (534)
+++. ++ ......++.. . ....--++.+++||+..+.... .+.|++++.++ +....+.-....+. ..++ +
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~---~~~v~~~d~~g-~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG---EGAVDRYDTDG-NHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET---TTEEEEECTTC-CEEEEEECSCSBEEEEEEEST
T ss_pred EEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC---CCEEEEECCCC-CEEEEEECCCCCcEEEEEecC
Confidence 8874 33 2112223321 1 1122235778899975443222 24678888743 21222221111111 2244 6
Q ss_pred eCCEEEEEEcCCCC---------CccEEEEEeCC
Q 009441 339 RGNHFFITRRSDEL---------FNSELLACPVD 363 (534)
Q Consensus 339 ~g~~lyi~tn~~~~---------~~~~L~~~~~~ 363 (534)
+++.||+.++..+. ..+.|+++++.
T Consensus 282 d~~~L~vt~~~~~~~~~~~~~~p~~g~~~~~~~~ 315 (326)
T 2ghs_A 282 DASRLLVTSAREHLDDDAITANPQHGLTFELGIE 315 (326)
T ss_dssp TSCEEEEEEBCTTCCHHHHHHCTTTTCEEECSSC
T ss_pred CCCEEEEEecCCCCChhHhccCCCCceEEEEeCC
Confidence 67889988875321 12667777653
No 195
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=95.58 E-value=0.00044 Score=68.40 Aligned_cols=46 Identities=13% Similarity=-0.052 Sum_probs=39.0
Q ss_pred CCCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 480 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 480 d~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
....+.++.+++++.||.+|+++++.|++. +++.|+||+.||+-+.
T Consensus 62 ~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~---~~~~p~vv~~HG~g~~ 107 (337)
T 1vlq_A 62 HLKTVEAYDVTFSGYRGQRIKGWLLVPKLE---EEKLPCVVQYIGYNGG 107 (337)
T ss_dssp SCSSEEEEEEEEECGGGCEEEEEEEEECCS---CSSEEEEEECCCTTCC
T ss_pred CCCCeEEEEEEEEcCCCCEEEEEEEecCCC---CCCccEEEEEcCCCCC
Confidence 345678999999999999999999999874 3578999999997654
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.57 E-value=1.7 Score=41.28 Aligned_cols=244 Identities=9% Similarity=0.060 Sum_probs=120.5
Q ss_pred EEEEEECCCCCEEEEEEc--CCCCeEEEEEEEECCCCCeecccc------CCccceeEEccC-CeEEEEEECCCCCCceE
Q 009441 193 VGCFQVSPDNKLVAYAED--TKGDEIYTVYVIDIETGTPVGKPL------VGVTASVEWAGN-EALVYITMDEILRPDKA 263 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d--~~G~E~~~l~v~dl~tg~~~~~~i------~~~~~~~~Ws~D-g~l~Y~~~d~~~r~~~v 263 (534)
...+.|++||+.++.+.. ..+.....|+++|+.+|+...... .+....+++++| |.++..... ..|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-----~~l 94 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-----LGL 94 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-----TEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-----CCE
Confidence 456789999975544100 001122368999998887643211 122345889999 677666531 268
Q ss_pred EEeecCCCCCCceEe-eeec--CC-ceEEEEEEcCCCcEEEEEecCc------------ceeEEEEEeCCCCCceeEeee
Q 009441 264 WLHKLEADQSNDICL-YHEK--DD-IYSLGLQASESKKFLFIASESK------------ITRFVFYLDVSKPEELRVLTP 327 (534)
Q Consensus 264 ~~~~lgt~~~~d~lv-~~e~--d~-~~~v~~~~S~Dg~~l~i~~~~~------------~~~ev~~~d~~~~~~~~~l~~ 327 (534)
++++.. +. -..+ .... .+ .....+.+++||+..+...... ....|+.++.+ +. +..+..
T Consensus 95 ~~~d~~-g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~ 169 (314)
T 1pjx_A 95 LVVQTD-GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQVDT 169 (314)
T ss_dssp EEEETT-SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEEEEE
T ss_pred EEEeCC-CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEEecc
Confidence 877765 31 1222 2111 11 1122567889998654433221 12578988876 33 433332
Q ss_pred ccccee-EEEe----eeCCEEEEEEcCCCCCccEEEEEeCC-CCCCc---eE-EecCCCCceeeeEEEeC-CEEEEEEee
Q 009441 328 RVVGVD-TAAS----HRGNHFFITRRSDELFNSELLACPVD-NTSET---TV-LIPHRESVKLQDIQLFI-DHLAVYERE 396 (534)
Q Consensus 328 ~~~g~~-~~v~----~~g~~lyi~tn~~~~~~~~L~~~~~~-~~~~~---~~-li~~~~~~~l~~~~~~~-~~lv~~~~~ 396 (534)
...... ..++ ++|+.+|+.... +.+|.+++++ +.... .+ .++........++.+.. +.|++....
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETP----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETT----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred CCCCcceEEEecccCCCCCEEEEEECC----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 211111 2244 555566665432 2567777654 21111 11 22221102466677665 466666544
Q ss_pred CCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCC
Q 009441 397 GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDM 464 (534)
Q Consensus 397 ~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~ 464 (534)
++ .|.+++.++ |+.+ ..+.++... +.....+.+++.+++.-.. ...++.+++..
T Consensus 246 ~~--~i~~~d~~~-g~~~------~~~~~~~~~--~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~~ 299 (314)
T 1pjx_A 246 SS--HIEVFGPDG-GQPK------MRIRCPFEK--PSNLHFKPQTKTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp TT--EEEEECTTC-BSCS------EEEECSSSC--EEEEEECTTSSEEEEEETT---TTEEEEEECSS
T ss_pred CC--EEEEEcCCC-CcEe------EEEeCCCCC--ceeEEECCCCCEEEEEeCC---CCeEEEEeCCC
Confidence 43 577787663 4422 234444211 1111123445556655322 25788888754
No 197
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.54 E-value=1.6 Score=40.81 Aligned_cols=189 Identities=14% Similarity=0.125 Sum_probs=103.9
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCC-cc-ceeEEccCC-eEEEEEECCCCCCceEEEeecCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VT-ASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~-~~-~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
++.+++ ..|-.+.-..| ...|+++|+++|+.+.. .++. .+ .+++. ++ ++|-.. .+..+++.++..+
T Consensus 25 GL~~~~--~~LyestG~~g--~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~lt----w~~~~v~v~D~~t 94 (243)
T 3mbr_X 25 GLFYLR--GHLYESTGETG--RSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLT----WRNHEGFVYDLAT 94 (243)
T ss_dssp EEEEET--TEEEEEECCTT--SCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEE----SSSSEEEEEETTT
T ss_pred cEEEEC--CEEEEECCCCC--CceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEE----eeCCEEEEEECCc
Confidence 456665 45544433333 46899999999998763 3443 23 23443 34 665553 4456889888876
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee----EEEeeeCCEEEEE
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD----TAASHRGNHFFIT 346 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~----~~v~~~g~~lyi~ 346 (534)
.....+ +.-...+ ..++.|++.|+++ + .++.|+++|.++.+..+.+.-...+.. ..++..++++|+.
T Consensus 95 l~~~~t--i~~~~~G----wglt~dg~~L~vS-d--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 95 LTPRAR--FRYPGEG----WALTSDDSHLYMS-D--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TEEEEE--EECSSCC----CEEEECSSCEEEE-C--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcEEEE--EeCCCCc----eEEeeCCCEEEEE-C--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 531111 2111122 3456788887764 3 267899999887551222221112211 2244557888854
Q ss_pred EcCCCCCccEEEEEeCCCCCCceE-----EecCC------CCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECC
Q 009441 347 RRSDELFNSELLACPVDNTSETTV-----LIPHR------ESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~-----li~~~------~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~ 408 (534)
.-. ...|.++|.++.....| +.+.. ....+-++++.+ +.|+++...= ++++.+.+.
T Consensus 166 vw~----s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w--p~~~~v~~~ 234 (243)
T 3mbr_X 166 VWL----TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW--PMLYEIRLT 234 (243)
T ss_dssp ETT----TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC--SEEEEEEEC
T ss_pred ECC----CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC--CcEEEEEEe
Confidence 421 23799999877654334 22211 223577888864 5777766433 455555443
No 198
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.52 E-value=0.3 Score=50.05 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=66.4
Q ss_pred EEEEEEECCC-CCEEEEEEcCCCCeEEEEEEEECCCCCeecccc--CCccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPD-G~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i--~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.|+|+ +++||-+.. +| +|+|+|+.++..+.... ......++|+|||..+++...+ ..|..+++
T Consensus 151 ~V~~v~~~p~~~~~las~s~-Dg----~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d----g~v~iwd~ 221 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLA-DG----SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN----GTVVQYLP 221 (434)
T ss_dssp SEEEEEECSSCTTEEEEEET-TS----CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT----SCEEEECT
T ss_pred ceEEEEECCCCCCEEEEEEC-CC----eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC----CcEEEEcc
Confidence 4778899998 677776544 44 59999999885432211 1123459999999444554332 24666665
Q ss_pred CCCCCCceEeeee-----cC-CceEEEEEEcCCCcEEEEEecCcc----eeEEEEEeCCC
Q 009441 269 EADQSNDICLYHE-----KD-DIYSLGLQASESKKFLFIASESKI----TRFVFYLDVSK 318 (534)
Q Consensus 269 gt~~~~d~lv~~e-----~d-~~~~v~~~~S~Dg~~l~i~~~~~~----~~ev~~~d~~~ 318 (534)
. .. ....+.. .+ ......+.+++++.+++...+..+ ...+++.++..
T Consensus 222 ~-~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 222 T-LQ--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp T-CC--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred C-Cc--ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 4 11 1111111 01 123456889999998877664421 23455656543
No 199
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=95.45 E-value=0.0088 Score=56.84 Aligned_cols=44 Identities=25% Similarity=0.225 Sum_probs=31.3
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcCc
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVIF 530 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~~ 530 (534)
..+.|+.+..++||.+||++|..|++- ++.|+||++||+.+...
T Consensus 27 ~~~~e~~~~~~~dG~~i~g~l~~P~~~----~~~p~Vl~~HG~g~~~~ 70 (259)
T 4ao6_A 27 LSVQERGFSLEVDGRTVPGVYWSPAEG----SSDRLVLLGHGGTTHKK 70 (259)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEESSS----CCSEEEEEEC-------
T ss_pred CCceEEEEEEeeCCeEEEEEEEeCCCC----CCCCEEEEeCCCccccc
Confidence 446677777789999999999999875 46799999999987543
No 200
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.40 E-value=1.9 Score=40.76 Aligned_cols=160 Identities=7% Similarity=-0.007 Sum_probs=87.6
Q ss_pred ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 285 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 285 ~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
.|.-++.++ |+ .|++.......+.|..+|+++++ ...-.+-....- -.+..++++||+++-. ..+++.+|.+
T Consensus 43 ~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgk-v~~~~~l~~~~FgeGit~~g~~ly~ltw~----~~~v~v~D~~ 115 (262)
T 3nol_A 43 AFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGK-TLQQIELGKRYFGEGISDWKDKIVGLTWK----NGLGFVWNIR 115 (262)
T ss_dssp CEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCC-EEEEEECCTTCCEEEEEEETTEEEEEESS----SSEEEEEETT
T ss_pred cccceEEEE-CC-EEEEECCCCCCceEEEEECCCCc-EEEEEecCCccceeEEEEeCCEEEEEEee----CCEEEEEECc
Confidence 355567777 55 67776666667899999999876 211111111111 1156779999999754 2578888886
Q ss_pred CCCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCC-CccCc
Q 009441 364 NTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFSS 441 (534)
Q Consensus 364 ~~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~-~~~~~ 441 (534)
+..... -++.. +.. ++...++.|++. +|..+|+++|..+ .+.+ +.|.....+..+...| .++.+
T Consensus 116 t~~~~~-ti~~~~eG~---glt~dg~~L~~S---dGs~~i~~iDp~T-~~v~------~~I~V~~~g~~~~~lNELe~~~ 181 (262)
T 3nol_A 116 NLRQVR-SFNYDGEGW---GLTHNDQYLIMS---DGTPVLRFLDPES-LTPV------RTITVTAHGEELPELNELEWVD 181 (262)
T ss_dssp TCCEEE-EEECSSCCC---CEEECSSCEEEC---CSSSEEEEECTTT-CSEE------EEEECEETTEECCCEEEEEEET
T ss_pred cCcEEE-EEECCCCce---EEecCCCEEEEE---CCCCeEEEEcCCC-CeEE------EEEEeccCCccccccceeEEEC
Confidence 643211 22221 111 233345666665 3567899998875 3432 2343321111111111 12223
Q ss_pred cEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 442 RILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 442 ~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
..++.. .+. ...|++.|+++|+..
T Consensus 182 G~lyan--~w~-~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 182 GEIFAN--VWQ-TNKIVRIDPETGKVT 205 (262)
T ss_dssp TEEEEE--ETT-SSEEEEECTTTCBEE
T ss_pred CEEEEE--Ecc-CCeEEEEECCCCcEE
Confidence 455543 343 358999999999864
No 201
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.39 E-value=2.5 Score=42.27 Aligned_cols=111 Identities=12% Similarity=0.039 Sum_probs=64.5
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc---CCccceeEEccCCeEEEEEECCCCCCceEEEeecCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i---~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
.+.++|||++|+.+... ..|+++|+.+++.+.. .. .+....++|+|++.++.+...+ ..|..+++.+
T Consensus 175 ~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~ 245 (437)
T 3gre_A 175 RAFVNEEKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR----GIIDIWDIRF 245 (437)
T ss_dssp EEEECSSCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT----SCEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcCC
Confidence 34588999999887553 3799999999987642 11 1233558999999655655432 3577777765
Q ss_pred CCCCceEeeeecCCceEEEE----EEcCCCcEEEEEecCcceeEEEEEeCCCC
Q 009441 271 DQSNDICLYHEKDDIYSLGL----QASESKKFLFIASESKITRFVFYLDVSKP 319 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~----~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~ 319 (534)
.. ....+.-....-...+ .+++|+++|+..+. ...|.+.++.++
T Consensus 246 ~~--~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~ 293 (437)
T 3gre_A 246 NV--LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS---KTFLTIWNFVKG 293 (437)
T ss_dssp TE--EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST---TEEEEEEETTTT
T ss_pred cc--EEEEEecCCCCceEEEEeccccCCCccEEEEEcC---CCcEEEEEcCCC
Confidence 31 1112221122222234 34567777665332 235677777654
No 202
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.25 E-value=0.66 Score=43.94 Aligned_cols=175 Identities=10% Similarity=0.051 Sum_probs=96.0
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCc-c-ceeEEccCC-eEEEEEECCCCCCceEEEeecCCCC
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-T-ASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~-~-~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~ 272 (534)
+.++ |+.|-.+.-..|. |+++|+++|+.+...++.. + .+++. +| .+|-.. ++..+++.++..+..
T Consensus 60 L~~~--~~~Ly~stG~~g~----v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~lt----w~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 60 LVFH--QGHFFESTGHQGT----LRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLT----WTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEE--TTEEEEEETTTTE----EEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEE----SSSCEEEEEETTTTE
T ss_pred EEEE--CCEEEEEcCCCCE----EEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEE----ccCCEEEEEECCcCc
Confidence 4454 4666555444443 9999999999876434432 2 22444 55 665554 345688988887653
Q ss_pred CCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee----EEEeeeCCEEEEEEc
Q 009441 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD----TAASHRGNHFFITRR 348 (534)
Q Consensus 273 ~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~----~~v~~~g~~lyi~tn 348 (534)
...++-+. ..+ ..+++||+.|+++. .++.++++|.++.+..+.+.-...+.. ..++..++.+|+..
T Consensus 128 ~~~ti~~~--~eG----wGLt~Dg~~L~vSd---Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 128 RERTTRYS--GEG----WGLCYWNGKLVRSD---GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEEEEECS--SCC----CCEEEETTEEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred EEEEEeCC--Cce----eEEecCCCEEEEEC---CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 21111121 112 34557899877643 367899999887651222221112211 12344467888544
Q ss_pred CCCCCccEEEEEeCCCCCCceE-----Eec------CCCCceeeeEEEeC--CEEEEEEe
Q 009441 349 SDELFNSELLACPVDNTSETTV-----LIP------HRESVKLQDIQLFI--DHLAVYER 395 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~-----li~------~~~~~~l~~~~~~~--~~lv~~~~ 395 (534)
. . ...|.++|.++.....| +.+ ...+..+-++++.+ +.|+++..
T Consensus 198 w-~--s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 198 W-H--SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp T-T--CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred C-C--CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 2 1 24899999877654444 111 11223477787764 45666543
No 203
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.23 E-value=2 Score=40.27 Aligned_cols=235 Identities=12% Similarity=0.023 Sum_probs=114.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc--ccCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~--~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.|..+.+ |||++||.+.. +| .|+|+|+.+++.... .-.+....++|+|++.++++...+ ..+..+++.
T Consensus 20 ~v~~~~~-~~~~~l~s~~~-dg----~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~ 89 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSR-DG----TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD----TMINGVPLF 89 (313)
T ss_dssp CEEEEEE-EETTEEEEEET-TS----EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT----SCEEEEETT
T ss_pred CcEEEEe-cCCCEEEEEEc-CC----cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC----CeEEEEEee
Confidence 4666778 99999886643 33 799999988875432 112334569999999555554332 245555554
Q ss_pred CCCCCc-eEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEee-eCCEEEEE
Q 009441 270 ADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASH-RGNHFFIT 346 (534)
Q Consensus 270 t~~~~d-~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~-~g~~lyi~ 346 (534)
...... ...+.. .......+.+ ++++++....+ ..+.+.+. ......+......+. ..+.+ +++.++..
T Consensus 90 ~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~~~~d---~~i~~~d~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 90 ATSGEDPLYTLIG-HQGNVCSLSF--QDGVVISGSWD---KTAKVWKE--GSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp CCTTSCC-CEECC-CSSCEEEEEE--ETTEEEEEETT---SEEEEEET--TEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred ecCCCCcccchhh-cccCEEEEEe--cCCEEEEEeCC---CCEEEEcC--CcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 332111 112221 1122233444 67766554432 24555562 111222222222221 12334 56665554
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeec
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFI 426 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp 426 (534)
+.. +.|...+... ....+.......+..+.+.++..++....+| .|.++++.. ++.+. .+...
T Consensus 162 ~~d-----~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg--~i~i~d~~~-~~~~~------~~~~~ 224 (313)
T 3odt_A 162 SAD-----KTIKLWQNDK---VIKTFSGIHNDVVRHLAVVDDGHFISCSNDG--LIKLVDMHT-GDVLR------TYEGH 224 (313)
T ss_dssp ETT-----SCEEEEETTE---EEEEECSSCSSCEEEEEEEETTEEEEEETTS--EEEEEETTT-CCEEE------EEECC
T ss_pred ECC-----CCEEEEecCc---eEEEEeccCcccEEEEEEcCCCeEEEccCCC--eEEEEECCc-hhhhh------hhhcC
Confidence 432 3344455321 1112322123347778776543366666666 577788875 44321 22211
Q ss_pred CceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 427 DPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 427 ~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
.. .+.......++ .+. +.+ .-+.+..||+.+++..
T Consensus 225 ~~--~i~~~~~~~~~-~l~-~~~---~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 225 ES--FVYCIKLLPNG-DIV-SCG---EDRTVRIWSKENGSLK 259 (313)
T ss_dssp SS--CEEEEEECTTS-CEE-EEE---TTSEEEEECTTTCCEE
T ss_pred Cc--eEEEEEEecCC-CEE-EEe---cCCEEEEEECCCCcee
Confidence 11 12111112233 222 222 3467899999888754
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.19 E-value=0.32 Score=46.84 Aligned_cols=154 Identities=14% Similarity=0.066 Sum_probs=80.0
Q ss_pred EEEEEECCCCCEEEEEEcCC-C-------------CeEEEEEEEECCCCCeeccccC-CccceeEEccCC-eEEEEEECC
Q 009441 193 VGCFQVSPDNKLVAYAEDTK-G-------------DEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNE-ALVYITMDE 256 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~-G-------------~E~~~l~v~dl~tg~~~~~~i~-~~~~~~~Ws~Dg-~l~Y~~~d~ 256 (534)
+..+.++|||+..+ .|.. | .....|+.+|.++|+..... . ....+++|+||| .+|+.....
T Consensus 133 ~~~i~~d~dG~l~~--td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 133 PNDLIVARDGAIWF--TDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCCEEECTTSCEEE--ECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC
T ss_pred CCCEEECCCCCEEE--eCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCC
Confidence 44678999998443 2210 1 11357999999888754322 1 123468999999 565543221
Q ss_pred -CCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-E
Q 009441 257 -ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 334 (534)
Q Consensus 257 -~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~ 334 (534)
.....+|+++++..+......++.+.....--++.++++|+ |.+... ..|++++.++.. +..+.-. .+.. .
T Consensus 210 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~----~gv~~~~~~g~~-~~~~~~~-~~~~~~ 282 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSG----TGVCVFDSDGQL-LGHIPTP-GTASNC 282 (305)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCS----SEEEEECTTSCE-EEEEECS-SCCCEE
T ss_pred cCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecC----CcEEEECCCCCE-EEEEECC-CceeEE
Confidence 01135788888753311111222211111111467789998 444331 248888875422 2222211 1222 2
Q ss_pred EEeeeCCEEEEEEcCCCCCccEEEEEeC
Q 009441 335 AASHRGNHFFITRRSDELFNSELLACPV 362 (534)
Q Consensus 335 ~v~~~g~~lyi~tn~~~~~~~~L~~~~~ 362 (534)
.++++++.||+.++. .|+++++
T Consensus 283 ~f~~d~~~L~it~~~------~l~~~~~ 304 (305)
T 3dr2_A 283 TFDQAQQRLFITGGP------CLWMLPL 304 (305)
T ss_dssp EECTTSCEEEEEETT------EEEEEEC
T ss_pred EEeCCCCEEEEEcCC------eEEEEEC
Confidence 355677788887752 4666554
No 205
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.14 E-value=2.1 Score=39.90 Aligned_cols=229 Identities=11% Similarity=0.082 Sum_probs=122.6
Q ss_pred CCEEEEEEcCCCCeEEEEEEEECCCCCeecc----cc--CC-ccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCCC
Q 009441 202 NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK----PL--VG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 202 G~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~----~i--~~-~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~~ 273 (534)
|.+|.|+- ...|+.++++++..... .+ +. ...+++|.+++ .+|++-. ...+|+++++.+..
T Consensus 1 ~~~l~~~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~----~~~~I~~~~~~g~~- 69 (267)
T 1npe_A 1 GTHLLFAQ------TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI----SEPSIGRASLHGGE- 69 (267)
T ss_dssp CEEEEEEE------EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET----TTTEEEEEESSSCC-
T ss_pred CcEEEEEc------CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC----CCCEEEEEecCCCC-
Confidence 45677764 23688889876643210 01 11 12468999877 6666542 23578888876542
Q ss_pred CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-ccee-EEEeeeCCEEEEEEcCCC
Q 009441 274 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVD-TAASHRGNHFFITRRSDE 351 (534)
Q Consensus 274 ~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~~-~~v~~~g~~lyi~tn~~~ 351 (534)
...+... .-..-.+++++++++.|++.... ...|+++++++.. .+.+.+.. .... ..++++++.+|+... +
T Consensus 70 -~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~--~ 142 (267)
T 1npe_A 70 -PTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDW--N 142 (267)
T ss_dssp -CEEEECT-TCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEEC--C
T ss_pred -cEEEEEC-CCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEEEC--C
Confidence 2223321 11122356788888888775432 3578888886543 23333221 1111 235666888887643 2
Q ss_pred CCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCce
Q 009441 352 LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 429 (534)
Q Consensus 352 ~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~ 429 (534)
..+.+|.+++++... ...+.... -....++.+.. ++||+..... .+|++++++ |... ..+ ++...
T Consensus 143 ~~~~~I~~~~~dg~~-~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~--~~I~~~~~~--g~~~------~~~-~~~~~ 209 (267)
T 1npe_A 143 RDNPKIETSHMDGTN-RRILAQDN-LGLPNGLTFDAFSSQLCWVDAGT--HRAECLNPA--QPGR------RKV-LEGLQ 209 (267)
T ss_dssp SSSCEEEEEETTSCC-CEEEECTT-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT--EEEE------EEE-EECCC
T ss_pred CCCcEEEEEecCCCC-cEEEEECC-CCCCcEEEEcCCCCEEEEEECCC--CEEEEEecC--CCce------EEE-ecCCC
Confidence 345788888875422 12233222 22366777764 5788776544 478889887 4321 111 11100
Q ss_pred eeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcE
Q 009441 430 YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 430 ~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
.-.. . ..+++.++++-. ....++++|..+++.
T Consensus 210 ~P~g-i--~~d~~~lyva~~---~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 210 YPFA-V--TSYGKNLYYTDW---KTNSVIAMDLAISKE 241 (267)
T ss_dssp SEEE-E--EEETTEEEEEET---TTTEEEEEETTTTEE
T ss_pred CceE-E--EEeCCEEEEEEC---CCCeEEEEeCCCCCc
Confidence 0001 1 123455665422 235789999887764
No 206
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.12 E-value=0.15 Score=50.53 Aligned_cols=58 Identities=14% Similarity=0.154 Sum_probs=36.3
Q ss_pred EEEEEEECCCCCEE-------------EEEEcCC-------CCeEEEEEEEECCCCCeeccccCC----c--cceeEEcc
Q 009441 192 SVGCFQVSPDNKLV-------------AYAEDTK-------GDEIYTVYVIDIETGTPVGKPLVG----V--TASVEWAG 245 (534)
Q Consensus 192 ~l~~~~~SPDG~~L-------------A~~~d~~-------G~E~~~l~v~dl~tg~~~~~~i~~----~--~~~~~Ws~ 245 (534)
.|..+.+||||+.+ +|+.-.+ |++..+|+|+|+++|+.+.. +.+ . ...++|+|
T Consensus 158 ~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t-L~g~~~~v~~v~~vafSp 236 (356)
T 2w18_A 158 QVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK-MHIDDSYQASVCHKAYSE 236 (356)
T ss_dssp EEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEE-EECCC---CCCEEEEEEE
T ss_pred cEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEE-EcCCCcceeeeEEEEECC
Confidence 35566778888774 4444222 45567999999999987652 321 1 12357999
Q ss_pred CCeEE
Q 009441 246 NEALV 250 (534)
Q Consensus 246 Dg~l~ 250 (534)
||.++
T Consensus 237 dG~~l 241 (356)
T 2w18_A 237 MGLLF 241 (356)
T ss_dssp TTEEE
T ss_pred CCCEE
Confidence 99433
No 207
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.07 E-value=2.5 Score=40.52 Aligned_cols=190 Identities=9% Similarity=0.088 Sum_probs=96.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.+..+.+||||++|+-+.. + .+|+|+|+.+|+.+... -......++|++++.++.+...+ ..|..+++.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~-D----~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----~~i~vwd~~ 137 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASW-D----KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD----KTIKVWTIK 137 (319)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT----SCEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeC-C----CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEECC
Confidence 4677899999999986543 2 47999999999875421 12223458999999666665432 245555654
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCC------CcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASES------KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH 342 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~D------g~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~ 342 (534)
.. ....+.. .......+.++++ +..++. ... ...|.+.++........+......+. ..++++|..
T Consensus 138 ~~---~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~s-~~~--d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 138 GQ---CLATLLG-HNDWVSQVRVVPNEKADDDSVTIIS-AGN--DKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp SC---EEEEECC-CSSCEEEEEECCC------CCEEEE-EET--TSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSE
T ss_pred CC---eEEEEec-cCCcEEEEEEccCCCCCCCccEEEE-EeC--CCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCE
Confidence 22 1112221 1223334556664 334433 222 23456667665431111222222222 225566665
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 408 (534)
|+.-+. .+.|...++..... ...+... + .+..+.+.++ .+++....++ +.+++++
T Consensus 211 l~s~~~-----dg~i~iwd~~~~~~-~~~~~~~-~-~v~~~~~sp~~~~la~~~~~~---i~v~~~~ 266 (319)
T 3frx_A 211 IASAGK-----DGEIMLWNLAAKKA-MYTLSAQ-D-EVFSLAFSPNRYWLAAATATG---IKVFSLD 266 (319)
T ss_dssp EEEEET-----TCEEEEEETTTTEE-EEEEECC-S-CEEEEEECSSSSEEEEEETTE---EEEEEET
T ss_pred EEEEeC-----CCeEEEEECCCCcE-EEEecCC-C-cEEEEEEcCCCCEEEEEcCCC---cEEEEeC
Confidence 543332 24566667654321 1123322 2 3667777654 3333333333 5555655
No 208
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.94 E-value=2.8 Score=40.32 Aligned_cols=157 Identities=11% Similarity=0.055 Sum_probs=84.7
Q ss_pred EEEEEEECC-CCCEEEEEEcCC--------------CCeEEEEEEEECCCCCeecc--ccCCccceeEEccCCeEEEEEE
Q 009441 192 SVGCFQVSP-DNKLVAYAEDTK--------------GDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITM 254 (534)
Q Consensus 192 ~l~~~~~SP-DG~~LA~~~d~~--------------G~E~~~l~v~dl~tg~~~~~--~i~~~~~~~~Ws~Dg~l~Y~~~ 254 (534)
....+.+.| ||+. |..+.. +.....|+++|.++++.... .+. ...+++|++||.++|+..
T Consensus 127 ~p~~i~~d~~~G~l--~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 127 WLYAVTVDQRTGIV--YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH-VPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp CEEEEEECTTTCCE--EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES-CCCEEEECTTSSEEEEEE
T ss_pred ccceEEEecCCCEE--EEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc-cCcceEECCCCCEEEEEe
Confidence 356788999 9963 333332 12235789999988864321 111 234589999995445543
Q ss_pred CCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecC--------cceeEEEEEeCCCCCceeEee
Q 009441 255 DEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES--------KITRFVFYLDVSKPEELRVLT 326 (534)
Q Consensus 255 d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~--------~~~~ev~~~d~~~~~~~~~l~ 326 (534)
. ...+|+++++.+.......++.+ .+. --++.++++|+. .+.... .....|+.++.++ + .....
T Consensus 204 ~---~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G-~-~~~~~ 275 (322)
T 2fp8_A 204 F---LSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFG-N-ILEVI 275 (322)
T ss_dssp G---GGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTS-C-EEEEE
T ss_pred C---CCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCE-EEEecCcccccccCCCccEEEEECCCC-C-EEEEE
Confidence 2 13578888886532222333432 222 234678899974 443322 1245788887653 2 22222
Q ss_pred ecccce----eEEEeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 327 PRVVGV----DTAASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 327 ~~~~g~----~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
....|. ...+...+++||+.+.. +.+|.+++++
T Consensus 276 ~~~~g~~~~~~~~~~~~~g~L~v~~~~----~~~i~~~~~~ 312 (322)
T 2fp8_A 276 PLPPPFAGEHFEQIQEHDGLLYIGTLF----HGSVGILVYD 312 (322)
T ss_dssp ECCTTTTTSCCCEEEEETTEEEEECSS----CSEEEEEEC-
T ss_pred ECCCCCccccceEEEEeCCEEEEeecC----CCceEEEecc
Confidence 221221 12233357888876532 3578888764
No 209
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.94 E-value=2.9 Score=40.43 Aligned_cols=206 Identities=9% Similarity=0.067 Sum_probs=103.5
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCe---------------------EEEEEEEECCCCCeeccccCC---ccceeEEccCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDE---------------------IYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE 247 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E---------------------~~~l~v~dl~tg~~~~~~i~~---~~~~~~Ws~Dg 247 (534)
.+.+++++|||+.++.... +.. ..+|+++|.++|+.+.....+ ...+++++++|
T Consensus 25 ~v~~va~d~~G~l~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRG--DHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CEEEEEECTTCCEEEEECT--TCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CceEEEECCCCCEEEEeCC--CCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4778899999987754322 211 026999999999876421111 23458999998
Q ss_pred eEEEEEECCCCCCceEEEeecCCCCCCceEeeeec------CCc--eEEEEEEcC-CCcEEEEEecCcceeEEEEEeCCC
Q 009441 248 ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK------DDI--YSLGLQASE-SKKFLFIASESKITRFVFYLDVSK 318 (534)
Q Consensus 248 ~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~------d~~--~~v~~~~S~-Dg~~l~i~~~~~~~~ev~~~d~~~ 318 (534)
.+|.+.. ...+|++++..... .....+... ... .-.++++++ +|+. ++.. +.....|++++.++
T Consensus 103 ~l~v~d~----~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~l-yv~d-~~~~~~I~~~~~~g 175 (329)
T 3fvz_A 103 NYWVTDV----ALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAV-FVSD-GYCNSRIVQFSPSG 175 (329)
T ss_dssp CEEEEET----TTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCE-EEEE-CSSCCEEEEECTTS
T ss_pred CEEEEEC----CCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeE-EEEe-CCCCCeEEEEcCCC
Confidence 8655532 13478888764331 112222210 111 223578898 5554 4432 22345788888543
Q ss_pred CCceeEeeeccc------c----ee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC
Q 009441 319 PEELRVLTPRVV------G----VD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI 387 (534)
Q Consensus 319 ~~~~~~l~~~~~------g----~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~ 387 (534)
.. ...+..... + .. ..++++++.+|+... .+.+|.+++.++......+........+..+.+.+
T Consensus 176 ~~-~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~----~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 176 KF-VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR----ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp CE-EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET----TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred CE-EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC----CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 21 222211111 0 11 225556678876543 23578888876332111121111122345555556
Q ss_pred CEEEEEEee-----CCeeEEEEEECCCCCC
Q 009441 388 DHLAVYERE-----GGLQKITTYRLPAVGE 412 (534)
Q Consensus 388 ~~lv~~~~~-----~g~~~l~~~~l~~~g~ 412 (534)
+.++..... .+...++++++.+ |+
T Consensus 251 g~~~~~~g~~~v~~~~~~~v~~~~~~~-g~ 279 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEPVQGFVMNFSS-GE 279 (329)
T ss_dssp TEEEEEECCCCTTCSCCCCEEEEETTT-CC
T ss_pred CEEEEeCCCEEeccCCCcEEEEEEcCC-Ce
Confidence 444443211 1122577777664 54
No 210
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.91 E-value=1.6 Score=47.87 Aligned_cols=199 Identities=11% Similarity=0.095 Sum_probs=102.6
Q ss_pred EEEEEEECCC--CCEEEEEEcCCCCeEEEEEEEECCCCCe--ecc--ccCCccceeEEccC--CeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTP--VGK--PLVGVTASVEWAGN--EALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SPD--G~~LA~~~d~~G~E~~~l~v~dl~tg~~--~~~--~i~~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v 263 (534)
.|..+.|||+ |++|+.+.. +| +|+++|+.+++. +.. ........++|+|+ +.++++...+ ..|
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~-Dg----~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d----g~I 125 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSY-DG----KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD----GKV 125 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEET-TS----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT----SEE
T ss_pred ceEEEEecCCCCCCEEEEEeC-CC----eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC----CcE
Confidence 4777899998 999887755 33 599999998862 221 11222345999999 7555555322 367
Q ss_pred EEeecCCCCCCceEeeeecCCceEEEEEEcC-------------CCcEEEEEecCcceeEEEEEeCCCCC-ceeEee--e
Q 009441 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASE-------------SKKFLFIASESKITRFVFYLDVSKPE-ELRVLT--P 327 (534)
Q Consensus 264 ~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~-------------Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~--~ 327 (534)
..+++.+........+.. .+.....+.++| |+++++..+.++ .|++.++..+. ....+. .
T Consensus 126 ~vwdl~~~~~~~~~~~~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg---~I~iwd~~~~~~~~~~~~~~~ 201 (753)
T 3jro_A 126 SVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN---LVKIWKYNSDAQTYVLESTLE 201 (753)
T ss_dssp EEEECCSSSCCCCEEEEC-CSSCEEEEEECCCC---------CGGGCCEEEEETTS---CEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEeecCCCcceeEeec-CCCceEEEEecCcccccccccccCCCCCEEEEEECCC---eEEEEeccCCcccceeeeeec
Confidence 777776542222223322 223344567788 578776654432 35555554433 122221 1
Q ss_pred cccceeE--EEeeeC--CEEEEEEcCCCCCccEEEEEeCCCCCCc--eEEecC-CCCceeeeEEEeCC-EEEEEEeeCCe
Q 009441 328 RVVGVDT--AASHRG--NHFFITRRSDELFNSELLACPVDNTSET--TVLIPH-RESVKLQDIQLFID-HLAVYEREGGL 399 (534)
Q Consensus 328 ~~~g~~~--~v~~~g--~~lyi~tn~~~~~~~~L~~~~~~~~~~~--~~li~~-~~~~~l~~~~~~~~-~lv~~~~~~g~ 399 (534)
...+... .+++++ +.+++....+ +.|...++...... ..+... .....+..+.+.++ ..++....+|.
T Consensus 202 ~h~~~V~~l~~sp~~~~~~~l~s~s~D----g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 202 GHSDWVRDVAWSPTVLLRSYLASVSQD----RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEESS----SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC
T ss_pred CCCCcEEEEEeccCCCCCCEEEEEecC----CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE
Confidence 1112122 255662 4444444332 33444454432110 011111 11224667777653 45556666674
Q ss_pred eEEEEEECCC
Q 009441 400 QKITTYRLPA 409 (534)
Q Consensus 400 ~~l~~~~l~~ 409 (534)
|+++++..
T Consensus 278 --I~vwd~~~ 285 (753)
T 3jro_A 278 --VTLWKENL 285 (753)
T ss_dssp --EECCBCCS
T ss_pred --EEEEecCC
Confidence 66667664
No 211
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.77 E-value=3 Score=39.86 Aligned_cols=198 Identities=13% Similarity=0.176 Sum_probs=100.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~ 272 (534)
..++.|+|||+ .|..|..+. .|+.+|.+++........+...++++.+||.+|...... ...+|++++..++.
T Consensus 34 pegia~~~~g~--lyv~d~~~~---~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~--~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 34 LENLASAPDGT--IFVTNHEVG---EIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNA--DSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEEEECTTSC--EEEEETTTT---EEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECT--TSCEEEEEECTTSC
T ss_pred cceEEECCCCC--EEEEeCCCC---eEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccC--CcceEEEEcCCCCe
Confidence 55689999998 455564433 488888876432211223334568999998865543221 12357776654442
Q ss_pred CCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeec------ccc--eeEEEeeeCCEE
Q 009441 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPR------VVG--VDTAASHRGNHF 343 (534)
Q Consensus 273 ~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~------~~g--~~~~v~~~g~~l 343 (534)
-..+.......+.-++...+++. +++... ....||.++...+. ......+. ..+ .-..++++++.|
T Consensus 107 --~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~l 181 (306)
T 2p4o_A 107 --VETLLTLPDAIFLNGITPLSDTQ-YLTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL 181 (306)
T ss_dssp --EEEEEECTTCSCEEEEEESSSSE-EEEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE
T ss_pred --EEEEEeCCCccccCcccccCCCc-EEEEEC--CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEE
Confidence 12233322223333444455554 433221 23478888876532 11111100 011 112257778888
Q ss_pred EEEEcCCCCCccEEEEEeCCC-CCCceE-EecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 344 FITRRSDELFNSELLACPVDN-TSETTV-LIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~-~~~~~~-li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
|+.-. .+.+|.+++++. ...... ++... ....++.+.. +.|++....+ .+|.+++.+ |+
T Consensus 182 yv~d~----~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~--~~V~~~~~~--G~ 243 (306)
T 2p4o_A 182 YVSNT----EKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIY--NSVVRIAPD--RS 243 (306)
T ss_dssp EEEET----TTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTT--CCEEEECTT--CC
T ss_pred EEEeC----CCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCC--CeEEEECCC--CC
Confidence 86543 236788888753 211111 22211 1245566664 3566555433 357778765 65
No 212
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.73 E-value=3.5 Score=40.48 Aligned_cols=198 Identities=10% Similarity=0.063 Sum_probs=114.9
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
..++.|++.++.|.++ |..+. .|+.++++++........+ ...+++..+.+ .+|++-. ...+|++.++.
T Consensus 75 ~~~l~~d~~~~~ly~~-D~~~~---~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~----~~~~I~~~~~d 146 (349)
T 3v64_C 75 AIALDFHHRRELVFWS-DVTLD---RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS----GTSRIEVANLD 146 (349)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETT
T ss_pred eEEEEEeccccEEEEE-eccCC---ceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC----CCCeEEEEcCC
Confidence 4567889888877665 44332 5888898876532211111 12457777665 6766642 12478888875
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITR 347 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~lyi~t 347 (534)
... ...+... +-..--++++.|++.+|+++-... ...|+.+++++.. .+.+.......- ..+++.++.||+.-
T Consensus 147 G~~--~~~l~~~-~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 147 GAH--RKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp SCS--CEEEECT-TCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCc--eEEEEeC-CCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 432 2333321 111123577889888888764322 3679999987643 333332111111 22666788998864
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
. .+.+|.+++++... ...++... .....++.+++++||+....++ +|.+++..+ |+
T Consensus 222 ~----~~~~I~~~~~dG~~-~~~~~~~~-~~~P~giav~~~~ly~td~~~~--~V~~~~~~~-G~ 277 (349)
T 3v64_C 222 A----KHHVIERANLDGSH-RKAVISQG-LPHPFAITVFEDSLYWTDWHTK--SINSANKFT-GK 277 (349)
T ss_dssp T----TTTEEEEEETTSCS-CEEEECSS-CSSEEEEEEETTEEEEEETTTT--EEEEEETTT-CC
T ss_pred C----CCCEEEEEeCCCCc-eEEEEeCC-CCCceEEEEECCEEEEecCCCC--eEEEEEccC-CC
Confidence 3 34689999986432 22244332 2246778888899988866444 677787433 55
No 213
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.62 E-value=3.1 Score=39.34 Aligned_cols=223 Identities=9% Similarity=0.031 Sum_probs=110.3
Q ss_pred eEEEEEEEECCCCCeecc-ccCC--ccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEeeeecCC--ceEEE
Q 009441 215 EIYTVYVIDIETGTPVGK-PLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDD--IYSLG 289 (534)
Q Consensus 215 E~~~l~v~dl~tg~~~~~-~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~--~~~v~ 289 (534)
+...|+++|.++|+.+-. ...+ ....+..+|||.++++. + ..|+.++. ++ .++++-..+ ....+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-~-----~~V~~~d~-~G----~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-S-----KGAKMITR-DG----RELWNIAAPAGCEMQT 81 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC-B-----SEEEEECT-TS----CEEEEEECCTTCEEEE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC-C-----CCEEEECC-CC----CEEEEEcCCCCccccc
Confidence 345788999989987642 2222 23457889999777732 2 35666665 33 234432111 12235
Q ss_pred EEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEee-ecc-cce-----eEEEeeeCCEEEEEEcCCCCCccEEEEEeC
Q 009441 290 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRV-VGV-----DTAASHRGNHFFITRRSDELFNSELLACPV 362 (534)
Q Consensus 290 ~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~-~~~-~g~-----~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~ 362 (534)
+..++||++++..... +..++.++.++.. +..+. ... .+. ...+..+|+.+ + +.. .+++|+.++.
T Consensus 82 ~~~~~dG~~lv~~~~~--~~~v~~vd~~Gk~-l~~~~~~~~~~~~~~~~~~v~~~~~G~~l-v-~~~---~~~~v~~~d~ 153 (276)
T 3no2_A 82 ARILPDGNALVAWCGH--PSTILEVNMKGEV-LSKTEFETGIERPHAQFRQINKNKKGNYL-V-PLF---ATSEVREIAP 153 (276)
T ss_dssp EEECTTSCEEEEEEST--TEEEEEECTTSCE-EEEEEECCSCSSGGGSCSCCEECTTSCEE-E-EET---TTTEEEEECT
T ss_pred cEECCCCCEEEEecCC--CCEEEEEeCCCCE-EEEEeccCCCCcccccccCceECCCCCEE-E-Eec---CCCEEEEECC
Confidence 6788999998765442 3467777764321 11111 110 010 01234455544 3 322 2468888887
Q ss_pred CCCCCceEEecCCCCceeeeEEEe-CCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCce-eeEeCCCCccC
Q 009441 363 DNTSETTVLIPHRESVKLQDIQLF-IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV-YSIDPSESVFS 440 (534)
Q Consensus 363 ~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~-~~i~~~~~~~~ 440 (534)
+ +...|-+..... ...+... ++.+++....++ +|..++.++ |+.+..+.. .. ++... ....+.....+
T Consensus 154 ~--G~~~w~~~~~~~--~~~~~~~~~g~~~v~~~~~~--~v~~~d~~t-G~~~w~~~~-~~--~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 154 N--GQLLNSVKLSGT--PFSSAFLDNGDCLVACGDAH--CFVQLNLES-NRIVRRVNA-ND--IEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp T--SCEEEEEECSSC--CCEEEECTTSCEEEECBTTS--EEEEECTTT-CCEEEEEEG-GG--SBSCCCSEEEEEEECTT
T ss_pred C--CCEEEEEECCCC--ccceeEcCCCCEEEEeCCCC--eEEEEeCcC-CcEEEEecC-CC--CCCccccccccceEcCC
Confidence 5 334573332211 2233333 455666555443 588888775 775432210 00 11000 00111112234
Q ss_pred ccEEEEEeccCC------CCCeEEEEECCCCcE
Q 009441 441 SRILRFHYSSLR------TPPSVYDYDMDMGIS 467 (534)
Q Consensus 441 ~~~l~~~~sS~~------~P~~~y~~d~~~~~~ 467 (534)
++.+...+.+-. ...+++.+|. +|+.
T Consensus 224 G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~ 255 (276)
T 3no2_A 224 GGLYICNWQGHDREAGKGKHPQLVEIDS-EGKV 255 (276)
T ss_dssp SCEEEEEECTTCTTGGGSCCCSEEEECT-TSBE
T ss_pred CCEEEEeccCccccccccCCceEEEECC-CCCE
Confidence 555555554432 3668888885 6664
No 214
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.45 E-value=0.81 Score=43.41 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=79.9
Q ss_pred EEEEEECCCCCEEEEEEcCCCC-------------eEEEEEEEECCCCCeeccccCC--ccceeEEccCCeEEEEEECCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGD-------------EIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEI 257 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~-------------E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~ 257 (534)
+..+.++|||++++-. ...|. ....|+.++.+ |+.... ..+ ...+++|+|||.++++..
T Consensus 117 ~~~i~~d~~G~l~vtd-~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~gi~~s~dg~~lv~~~--- 190 (296)
T 3e5z_A 117 PNDVCLAPDGSLWFSD-PTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP-IRDRVKPNGLAFLPSGNLLVSDT--- 190 (296)
T ss_dssp CCCEEECTTSCEEEEE-CSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE-ECCCSSEEEEEECTTSCEEEEET---
T ss_pred CCCEEECCCCCEEEEC-CccccccccccccccccCCCcEEEEECCC-CCEEEe-ecCCCCCccEEECCCCCEEEEeC---
Confidence 4457899999855421 10010 11367888876 654321 121 235699999995544432
Q ss_pred CCCceEEEeecC-CCCC-CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-E
Q 009441 258 LRPDKAWLHKLE-ADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-T 334 (534)
Q Consensus 258 ~r~~~v~~~~lg-t~~~-~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~ 334 (534)
...+|+++++. ++.. ....++ ......--++.+++||+..+. . .+.|++++.++.. +..+. ...+.. .
T Consensus 191 -~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~-~----~~~v~~~~~~g~~-~~~~~-~~~~~~~~ 261 (296)
T 3e5z_A 191 -GDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWAS-A----GDGVHVLTPDGDE-LGRVL-TPQTTSNL 261 (296)
T ss_dssp -TTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEE-E----TTEEEEECTTSCE-EEEEE-CSSCCCEE
T ss_pred -CCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEE-c----CCeEEEECCCCCE-EEEEE-CCCCceeE
Confidence 23478888875 2211 112244 222222224678899985433 3 3468888876421 22222 111222 2
Q ss_pred EE-eeeCCEEEEEEcCCCCCccEEEEEeCCC
Q 009441 335 AA-SHRGNHFFITRRSDELFNSELLACPVDN 364 (534)
Q Consensus 335 ~v-~~~g~~lyi~tn~~~~~~~~L~~~~~~~ 364 (534)
.+ +++++.||+.++. .|++++..+
T Consensus 262 ~f~~~d~~~L~v~t~~------~l~~~~~~~ 286 (296)
T 3e5z_A 262 CFGGPEGRTLYMTVST------EFWSIETNV 286 (296)
T ss_dssp EEESTTSCEEEEEETT------EEEEEECSC
T ss_pred EEECCCCCEEEEEcCC------eEEEEEccc
Confidence 24 3567788887652 588887754
No 215
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.05 E-value=5.3 Score=39.79 Aligned_cols=152 Identities=5% Similarity=0.050 Sum_probs=86.5
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecCC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
.++.++|.++.|.++-...+ .|.+.++++.........+ ...+++..|++ .+|++-.. ...+|++.++..
T Consensus 162 ~glavd~~~g~lY~~d~~~~----~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~---~~~~I~r~~~dG 234 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTS----RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG---NTPRIEASSMDG 234 (386)
T ss_dssp CCEEEETTTTEEEEEETTTT----EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS---SSCEEEEEETTS
T ss_pred cEEEEEeCCCeEEEEcCCCC----eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC---CCCEEEEEeCCC
Confidence 44678888888777654332 6888888755322111111 23457888876 66665321 235899988754
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 350 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~ 350 (534)
. ....+... +-.+--+++++++++.|++.-. ....|+.+++++.. .+.+.....+.-..+..+++.+|+.- .
T Consensus 235 ~--~~~~~~~~-~~~~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~-~~~~~~~~~~~P~giav~~~~ly~td-~- 306 (386)
T 3v65_B 235 S--GRRIIADT-HLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSH-RKAVISQGLPHPFAITVFEDSLYWTD-W- 306 (386)
T ss_dssp C--SCEEEECS-SCSCEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCS-CEEEECSSCSSEEEEEEETTEEEEEE-T-
T ss_pred C--CcEEEEEC-CCCCeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCe-eEEEEECCCCCceEEEEECCEEEEee-C-
Confidence 3 22333321 2223346888988888877532 24578999887643 33333322222233444678887753 3
Q ss_pred CCCccEEEEEeC
Q 009441 351 ELFNSELLACPV 362 (534)
Q Consensus 351 ~~~~~~L~~~~~ 362 (534)
.+.+|.+++.
T Consensus 307 --~~~~V~~~~~ 316 (386)
T 3v65_B 307 --HTKSINSANK 316 (386)
T ss_dssp --TTTEEEEEET
T ss_pred --CCCeEEEEEC
Confidence 2467888874
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.02 E-value=5.7 Score=39.96 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=64.2
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc------cCCccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP------LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~------i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
+.|+|||++|..+ +..|.. .|++++..++...... ..+....++++|++ .||+ . +. ..+|++++.
T Consensus 176 ia~~~~g~~l~~~-d~~~~~--~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~-d~---~~~I~~~d~ 247 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWEGTH--TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-V-DS---NKNFGRFNV 247 (409)
T ss_dssp CEECTTSSEEEEE-BSSTTC--EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-E-CT---TCEEEEEET
T ss_pred eeEecCCCcEEEE-ecCCCc--eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-E-EC---CCcEEEEEC
Confidence 6899999976555 444432 7888898776532111 11223458999955 6666 3 32 347999888
Q ss_pred CCCCCCceEeee----ecCCceE-E-EEEEcCCCcEEEEEecCcceeEEEEEeCCC
Q 009441 269 EADQSNDICLYH----EKDDIYS-L-GLQASESKKFLFIASESKITRFVFYLDVSK 318 (534)
Q Consensus 269 gt~~~~d~lv~~----e~d~~~~-v-~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~ 318 (534)
.+.. ..++. ....... . ++.+++++..|++... .+..|+.++.+.
T Consensus 248 ~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~--~~~~I~~~~~~g 298 (409)
T 3hrp_A 248 KTQE---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ--NLSSVYKITPDG 298 (409)
T ss_dssp TTCC---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET--TTTEEEEECTTC
T ss_pred CCCC---EEEEecccccCCCCCCccccEEEeCCCCEEEEEeC--CCCEEEEEecCC
Confidence 6552 23331 1111112 2 5788897777776532 234688887654
No 217
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.00 E-value=3.8 Score=42.87 Aligned_cols=194 Identities=11% Similarity=0.133 Sum_probs=99.0
Q ss_pred EEEEEEECCC------CCEEEEEEcCCCCeEEEEEEEECCCCCee-------cc---ccC---CccceeEEccCCeEEEE
Q 009441 192 SVGCFQVSPD------NKLVAYAEDTKGDEIYTVYVIDIETGTPV-------GK---PLV---GVTASVEWAGNEALVYI 252 (534)
Q Consensus 192 ~l~~~~~SPD------G~~LA~~~d~~G~E~~~l~v~dl~tg~~~-------~~---~i~---~~~~~~~Ws~Dg~l~Y~ 252 (534)
.+..++|||+ |++||-+.. +| +|+|+|+.+++.. .. .+. .....++|++++. +.+
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~-Dg----tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~-las 282 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQ-EG----TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTT-VVC 282 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEET-TS----CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSE-EEE
T ss_pred cEEEEEECCCCCCCCCCceEEEEec-CC----eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCe-EEE
Confidence 3667899997 567776544 33 6999999877421 00 121 2234589998764 455
Q ss_pred EECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEE--EEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc
Q 009441 253 TMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGL--QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV 330 (534)
Q Consensus 253 ~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~--~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~ 330 (534)
...+ ..|..+++.++.. ....+.... ....++ .++++|..++++++.. ..|.+-|+.++.....+.....
T Consensus 283 gs~D----gtV~lWD~~~~~~-~~~~~~~H~-~~V~sv~~~~s~~g~~~laS~S~D--~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 283 GFKN----GFVAEFDLTDPEV-PSFYDQVHD-SYILSVSTAYSDFEDTVVSTVAVD--GYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp EETT----SEEEEEETTBCSS-CSEEEECSS-SCEEEEEEECCTTSCCEEEEEETT--SEEEEECGGGHHHHCEEEEECS
T ss_pred EeCC----CEEEEEECCCCCC-ceEEeeccc-ccEEEEEEEcCCCCCeEEEEeccC--CeEEEEECCCCCcccccccccc
Confidence 4332 3677888876522 122233222 223334 5688884444444332 3455667655331222222221
Q ss_pred c--e-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEE
Q 009441 331 G--V-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYR 406 (534)
Q Consensus 331 g--~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~ 406 (534)
+ + ...+++++..| +.+.. . ..+...++.+......+..+. + .+..+.+.++ .+++....+|. |++++
T Consensus 355 ~~~v~~v~fsp~~~~l-~s~~~--d--~tv~lwd~~~~~~~~~l~gH~-~-~V~sva~Sp~g~~l~Sgs~Dgt--v~lwd 425 (524)
T 2j04_B 355 GSNLVPVVYCPQIYSY-IYSDG--A--SSLRAVPSRAAFAVHPLVSRE-T-TITAIGVSRLHPMVLAGSADGS--LIITN 425 (524)
T ss_dssp CCSCCCEEEETTTTEE-EEECS--S--SEEEEEETTCTTCCEEEEECS-S-CEEEEECCSSCCBCEEEETTTE--EECCB
T ss_pred cCcccceEeCCCcCeE-EEeCC--C--CcEEEEECcccccceeeecCC-C-ceEEEEeCCCCCeEEEEECCCE--EEEEe
Confidence 1 1 23356666653 33332 1 234445655432211133332 2 4777777654 45667777775 44556
Q ss_pred CC
Q 009441 407 LP 408 (534)
Q Consensus 407 l~ 408 (534)
+.
T Consensus 426 ~~ 427 (524)
T 2j04_B 426 AA 427 (524)
T ss_dssp SC
T ss_pred ch
Confidence 54
No 218
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.86 E-value=4.5 Score=40.15 Aligned_cols=71 Identities=11% Similarity=0.152 Sum_probs=46.0
Q ss_pred EEEEEEECC--------CCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCC-eEEEEEECCCCCC
Q 009441 192 SVGCFQVSP--------DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALVYITMDEILRP 260 (534)
Q Consensus 192 ~l~~~~~SP--------DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg-~l~Y~~~d~~~r~ 260 (534)
.|..+.||| ||++||=+.+ ..+++|||+.++..+... .......++|+|++ .++.+...+
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~-----D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d---- 208 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGD-----DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN---- 208 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEET-----TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT----
T ss_pred ceEEEEEccccccccCCCCCEEEEEEC-----CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC----
Confidence 466778887 8999986544 248999999887654321 22223459999998 666665432
Q ss_pred ceEEEeecCCC
Q 009441 261 DKAWLHKLEAD 271 (534)
Q Consensus 261 ~~v~~~~lgt~ 271 (534)
..|..+++.++
T Consensus 209 ~~v~~wd~~t~ 219 (393)
T 4gq1_A 209 GNIRIFDWTLN 219 (393)
T ss_dssp SEEEEEETTCC
T ss_pred CEEEEEECCCC
Confidence 35666666554
No 219
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.83 E-value=4 Score=37.55 Aligned_cols=190 Identities=10% Similarity=0.091 Sum_probs=98.5
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCCeEEEEEECCCCCCceEEEeecCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
+..+.++|||+ |.++ +.+| .|+++|.+++........+ ....+++.++|.+|.+... ...|++++.++
T Consensus 69 p~~i~~~~~g~-l~v~-~~~~----~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~----~~~i~~~~~~~ 138 (270)
T 1rwi_B 69 PQGLAVDGAGT-VYVT-DFNN----RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRG----NNRVVKLAAGS 138 (270)
T ss_dssp CCCEEECTTCC-EEEE-ETTT----EEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGG----GTEEEEECTTC
T ss_pred cceeEECCCCC-EEEE-cCCC----EEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECC----CCEEEEEECCC
Confidence 45578999998 3333 3332 5888998776543221122 2345888888876655422 24688776665
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEE--EeeeCCEEEEEEc
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNHFFITRR 348 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~--v~~~g~~lyi~tn 348 (534)
.. ...........-.++.+++||+ +++... ....|++++.++.. ...........-.. ++++| .+|+.+.
T Consensus 139 ~~---~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~g-~l~v~~~ 210 (270)
T 1rwi_B 139 KT---QTVLPFTGLNDPDGVAVDNSGN-VYVTDT--DNNRVVKLEAESNN-QVVLPFTDITAPWGIAVDEAG-TVYVTEH 210 (270)
T ss_dssp CS---CEECCCCSCCSCCCEEECTTCC-EEEEEG--GGTEEEEECTTTCC-EEECCCSSCCSEEEEEECTTC-CEEEEET
T ss_pred ce---eEeeccccCCCceeEEEeCCCC-EEEEEC--CCCEEEEEecCCCc-eEeecccCCCCceEEEECCCC-CEEEEEC
Confidence 42 1111111111112467789998 444322 23578888876643 21111111011122 34443 7777664
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 408 (534)
. +.+|.+++.+... ...++........++.+.+ +.|++....++ +|.++++.
T Consensus 211 ~----~~~v~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~--~v~~~~~~ 263 (270)
T 1rwi_B 211 N----TNQVVKLLAGSTT--STVLPFTGLNTPLAVAVDSDRTVYVADRGND--RVVKLTSL 263 (270)
T ss_dssp T----TSCEEEECTTCSC--CEECCCCSCSCEEEEEECTTCCEEEEEGGGT--EEEEECCC
T ss_pred C----CCcEEEEcCCCCc--ceeeccCCCCCceeEEECCCCCEEEEECCCC--EEEEEcCC
Confidence 2 2467788765322 1222222112366777764 45776665444 67777766
No 220
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.78 E-value=5.1 Score=38.61 Aligned_cols=199 Identities=5% Similarity=0.040 Sum_probs=110.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC---CCeeccccC-C--ccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET---GTPVGKPLV-G--VTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t---g~~~~~~i~-~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
..++.|+++++.|.++-. .+. .|+.+++++ |......+. + ...+++..+.+ .+|++-. ...+|.+
T Consensus 32 p~g~~~d~~~~~ly~~D~-~~~---~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~----~~~~I~~ 103 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDL-SQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----VLGTVSV 103 (316)
T ss_dssp EEEEEEETTTTEEEEEET-TTT---EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEE
T ss_pred eEEEEEEeCCCEEEEEEC-CCC---cEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC----CCCEEEE
Confidence 456788998887766543 332 688888876 121111121 1 22457777655 6666532 1347877
Q ss_pred eecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEE
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHF 343 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~l 343 (534)
.++... ....+... +-..--++++.|++++|++.... ....|+.+++++.. .+.+....-..- ..++++++.|
T Consensus 104 ~~~~g~--~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 104 ADTKGV--KRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp EETTSS--SEEEEEEC-TTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEE
T ss_pred EeCCCC--ceEEEEEC-CCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEE
Confidence 776533 22333332 11122357788888888876432 23578999887643 333322111111 2256678899
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 344 FITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
|+.-. .+.+|.+++++.... +.++... ......++.+++++||+....+ .+|.+++..+ |+
T Consensus 179 Y~~D~----~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~~~~ly~~d~~~--~~V~~~~~~~-g~ 240 (316)
T 1ijq_A 179 YWVDS----KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLT-GS 240 (316)
T ss_dssp EEEET----TTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTT--TEEEEEETTT-CC
T ss_pred EEEEC----CCCeEEEEecCCCce-EEEeecCCccCCcEEEEEECCEEEEEECCC--CeEEEEeCCC-Cc
Confidence 87543 346899999864222 2233321 1223567888889998877544 4788888643 55
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.58 E-value=5 Score=37.91 Aligned_cols=161 Identities=7% Similarity=-0.064 Sum_probs=86.5
Q ss_pred eEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCC
Q 009441 286 YSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 364 (534)
Q Consensus 286 ~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~ 364 (534)
|--++.+++|| .|++.+.....+.|.++|+++++ ...-.+-..+.. -.+..+|+++|+.+.. ...+..+|.++
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~-v~~~i~l~~~~fgeGi~~~g~~lyv~t~~----~~~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGK-VENIHKMDDSYFGEGLTLLNEKLYQVVWL----KNIGFIYDRRT 95 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCC-EEEEEECCTTCCEEEEEEETTEEEEEETT----CSEEEEEETTT
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCC-EEEEEecCCCcceEEEEEeCCEEEEEEec----CCEEEEEECCC
Confidence 55578888985 67776555567889999999876 221111111111 1245568999998753 25788888765
Q ss_pred CCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCC-CccCcc
Q 009441 365 TSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFSSR 442 (534)
Q Consensus 365 ~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~-~~~~~~ 442 (534)
..... -++.. ... -++...++.||+. +|...|.++|..+ .+.+ +.|........+...| ..+.+.
T Consensus 96 ~~v~~-~i~~g~~~g--~glt~Dg~~l~vs---~gs~~l~viD~~t-~~v~------~~I~Vg~~~~p~~~~nele~~dg 162 (266)
T 2iwa_A 96 LSNIK-NFTHQMKDG--WGLATDGKILYGS---DGTSILYEIDPHT-FKLI------KKHNVKYNGHRVIRLNELEYING 162 (266)
T ss_dssp TEEEE-EEECCSSSC--CEEEECSSSEEEE---CSSSEEEEECTTT-CCEE------EEEECEETTEECCCEEEEEEETT
T ss_pred CcEEE-EEECCCCCe--EEEEECCCEEEEE---CCCCeEEEEECCC-CcEE------EEEEECCCCcccccceeEEEECC
Confidence 33211 23322 111 1233445677764 3567899998874 3322 2333211000000000 011123
Q ss_pred EEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 443 ILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 443 ~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
.++.. .+. ..++...|+++++..
T Consensus 163 ~lyvn--~~~-~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 163 EVWAN--IWQ-TDCIARISAKDGTLL 185 (266)
T ss_dssp EEEEE--ETT-SSEEEEEETTTCCEE
T ss_pred EEEEe--cCC-CCeEEEEECCCCcEE
Confidence 45543 333 358999999999853
No 222
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.33 E-value=4.8 Score=36.96 Aligned_cols=192 Identities=13% Similarity=0.120 Sum_probs=95.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
....+.++|||+ |.++.+..+ ..|+++|..++........+ ...++++.+||.+|.+.. ...|++++..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-----~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMY---GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-----NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSS---CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-----TTEEEEECTT
T ss_pred CccceEECCCCC-EEEEccCCC---CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-----CCEEEEEeCC
Confidence 456778999998 333244322 35778887665433211111 234589998888655532 3478888765
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-cce-eEEEeeeCCEEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGV-DTAASHRGNHFFITR 347 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~-~~~v~~~g~~lyi~t 347 (534)
+.. ...+.......-.++.++++|+ +++... ....|++++..+.. ........ ... ...++++| .+|+..
T Consensus 96 ~~~---~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~~~~g-~l~v~~ 167 (270)
T 1rwi_B 96 SNN---QTVLPFDGLNYPEGLAVDTQGA-VYVADR--GNNRVVKLAAGSKT-QTVLPFTGLNDPDGVAVDNSG-NVYVTD 167 (270)
T ss_dssp CSC---CEECCCCSCSSEEEEEECTTCC-EEEEEG--GGTEEEEECTTCCS-CEECCCCSCCSCCCEEECTTC-CEEEEE
T ss_pred Cce---EeeeecCCcCCCcceEECCCCC-EEEEEC--CCCEEEEEECCCce-eEeeccccCCCceeEEEeCCC-CEEEEE
Confidence 432 1222111112234577889998 444322 23467777654432 11111110 111 12244444 577655
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~ 408 (534)
.. +.+|.+++.+... .............++.+.++ .|++....++ .|.+++.+
T Consensus 168 ~~----~~~i~~~~~~~~~--~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~--~v~~~~~~ 221 (270)
T 1rwi_B 168 TD----NNRVVKLEAESNN--QVVLPFTDITAPWGIAVDEAGTVYVTEHNTN--QVVKLLAG 221 (270)
T ss_dssp GG----GTEEEEECTTTCC--EEECCCSSCCSEEEEEECTTCCEEEEETTTS--CEEEECTT
T ss_pred CC----CCEEEEEecCCCc--eEeecccCCCCceEEEECCCCCEEEEECCCC--cEEEEcCC
Confidence 42 3578888875422 11111111124677777654 6777665433 57777776
No 223
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=93.22 E-value=0.074 Score=53.47 Aligned_cols=80 Identities=15% Similarity=0.084 Sum_probs=52.5
Q ss_pred EEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEE
Q 009441 443 ILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYG 522 (534)
Q Consensus 443 ~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~g 522 (534)
.+++..+++.+|.++|.+|..+..............++...+.++++++++ ||++|+++++.|++. ++.|+||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-dg~~i~~~l~~p~~~----~~~P~vl~~ 158 (386)
T 2jbw_A 84 ELLMSAALCAQYAQFLWFDERRQKGQARKVELYQKAAPLLSPPAERHELVV-DGIPMPVYVRIPEGP----GPHPAVIML 158 (386)
T ss_dssp HHHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHHHHHGGGSSSCEEEEEEEE-TTEEEEEEEECCSSS----CCEEEEEEE
T ss_pred HHHHHHHHhhceeeeeccCCCCCHHHHHHHHHHHHHHhhcCCCeEEEEEEe-CCEEEEEEEEcCCCC----CCCCEEEEe
Confidence 466777888999998887642111000000011012333356789999998 999999999998864 578999988
Q ss_pred cCCCC
Q 009441 523 YGSYE 527 (534)
Q Consensus 523 YGgyg 527 (534)
||+.+
T Consensus 159 hG~~~ 163 (386)
T 2jbw_A 159 GGLES 163 (386)
T ss_dssp CCSSC
T ss_pred CCCCc
Confidence 66544
No 224
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.20 E-value=5.7 Score=37.41 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=60.1
Q ss_pred EEEEEEECC--CCCEEEEEEcCCCCeEEEEEEEECCCCCe---------ecccc---CCccceeEEccC--CeEEEEEEC
Q 009441 192 SVGCFQVSP--DNKLVAYAEDTKGDEIYTVYVIDIETGTP---------VGKPL---VGVTASVEWAGN--EALVYITMD 255 (534)
Q Consensus 192 ~l~~~~~SP--DG~~LA~~~d~~G~E~~~l~v~dl~tg~~---------~~~~i---~~~~~~~~Ws~D--g~l~Y~~~d 255 (534)
.|..+.|+| ||++|+.+.. +| +|+|+|+.+++. +. .+ .+....++|+|+ +.++++...
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~-dg----~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASY-DK----TVKLWEEDPDQEECSGRRWNKLC-TLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEET-TS----CEEEEEECTTSCTTSSCSEEEEE-EECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cEEEEEEcCCCCCCEEEEEcC-CC----eEEEEecCCCcccccccCcceee-eecccCCceeEEEEcCCCCCcEEEEecC
Confidence 477889999 6999987655 33 699999988742 21 12 222345899999 755555432
Q ss_pred CCCCCceEEEeecCCCCCCceEeeee----------cCCceEEEEEEcCC---CcEEEEEecC
Q 009441 256 EILRPDKAWLHKLEADQSNDICLYHE----------KDDIYSLGLQASES---KKFLFIASES 305 (534)
Q Consensus 256 ~~~r~~~v~~~~lgt~~~~d~lv~~e----------~d~~~~v~~~~S~D---g~~l~i~~~~ 305 (534)
+ ..|+.+++.+......+-... ........+.++|+ ++++++....
T Consensus 133 d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~ 191 (351)
T 3f3f_A 133 D----GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE 191 (351)
T ss_dssp T----CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT
T ss_pred C----CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC
Confidence 2 367777776543211111100 11112234677886 7777665543
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.11 E-value=10 Score=40.09 Aligned_cols=259 Identities=8% Similarity=-0.071 Sum_probs=125.9
Q ss_pred EEECC-----CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCc--cceeEE-c-cCC-eEEEEEEC-----CCCC
Q 009441 196 FQVSP-----DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV--TASVEW-A-GNE-ALVYITMD-----EILR 259 (534)
Q Consensus 196 ~~~SP-----DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~--~~~~~W-s-~Dg-~l~Y~~~d-----~~~r 259 (534)
+.+|. ||++|-..-. .+ ..|.++|+++.+.... .|++. ..++++ + ||+ .+|..... ..++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~-~~---~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDK-AN---TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEETTEEEEEEEEEEET-TT---TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred cccCCCCCCcCCCEEEEEcC-CC---CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 45666 9998777433 33 3699999999985442 35542 245776 4 888 55444311 1111
Q ss_pred C--------ceEEEeecCCCCCCceEeee---ecCCceEEEEEEcCCCcEEEEEecCcc---------------------
Q 009441 260 P--------DKAWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKFLFIASESKI--------------------- 307 (534)
Q Consensus 260 ~--------~~v~~~~lgt~~~~d~lv~~---e~d~~~~v~~~~S~Dg~~l~i~~~~~~--------------------- 307 (534)
+ ..+-..+..+. .++++ ..++. .+..|+||+|+++++.+..
T Consensus 166 ~l~~~~~~~~~vtvID~~t~----~v~~qI~Vgg~pd---~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~ 238 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKW----EVAWQVLVSGNLD---NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI 238 (595)
T ss_dssp STTCGGGEEEEEEEEETTTT----EEEEEEEESSCCC---CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred ccccccccCceEEEEECCCC----eEEEEEEeCCCcc---ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeec
Confidence 1 13334444432 34443 11332 2568999999999873320
Q ss_pred --------------eeEEEEEeCCC--CCceeEeeecccc-eeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCC----
Q 009441 308 --------------TRFVFYLDVSK--PEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTS---- 366 (534)
Q Consensus 308 --------------~~ev~~~d~~~--~~~~~~l~~~~~g-~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~---- 366 (534)
-+.|.++|.++ ........+-... ....++++|.++|+ ++. .++ ++..++++...
T Consensus 239 ~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~-~s~--~VsVid~~~~~~~~~ 314 (595)
T 1fwx_A 239 AEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCV-AGK-LSP--TVTVLDVTRFDAVFY 314 (595)
T ss_dssp HHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEE-ECT-TSS--BEEEEEGGGHHHHHH
T ss_pred cceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEE-eCC-CCC--eEEEEECcccccccc
Confidence 12366666655 2211111211111 12336777777654 554 343 56666654210
Q ss_pred ----CceEEecC-CCCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCC-----CCCcccccCCCceeeecCc-eee-E-
Q 009441 367 ----ETTVLIPH-RESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA-----VGEPLKSLQGGKSVEFIDP-VYS-I- 432 (534)
Q Consensus 367 ----~~~~li~~-~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~-----~g~~~~~~~~~~~i~lp~~-~~~-i- 432 (534)
....++.+ ..+..-..+.+.++ ++|+..- -.++|.+++++. +|+... .....+...-. +.. .
T Consensus 315 ~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~--ldsqV~kwdi~~a~~~~~g~~~~--~vi~kidV~yqpGh~~~~ 390 (595)
T 1fwx_A 315 ENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLF--LDSQVVKWNIEDAIRAYAGEKVD--PIKDKLDVHYQPGHLKTV 390 (595)
T ss_dssp SCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEET--TTTEEEEEEHHHHHHHHHTCSCC--CEEEEEECSSCEEEEEET
T ss_pred cccCcccceEEEcCCCCCcceEEECCCCeEEEEEe--cCCcEEEEEhhHhhhhhcccccc--eeEEEeecccccccceec
Confidence 00011111 11222455666554 4444433 345777888763 011110 00112222111 111 1
Q ss_pred eCCCCccCccEEEEEe---------ccCCCCCeEEEEECCCCcEEEEEEc
Q 009441 433 DPSESVFSSRILRFHY---------SSLRTPPSVYDYDMDMGISVLKKIE 473 (534)
Q Consensus 433 ~~~~~~~~~~~l~~~~---------sS~~~P~~~y~~d~~~~~~~~~~~~ 473 (534)
.+...+.+++.++..- -++..|..-..+|..+++++++...
T Consensus 391 ~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~ 440 (595)
T 1fwx_A 391 MGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDG 440 (595)
T ss_dssp TTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEE
T ss_pred cceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEE
Confidence 1234456666654332 1246777778899988888777653
No 226
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.85 E-value=14 Score=40.82 Aligned_cols=199 Identities=6% Similarity=0.046 Sum_probs=107.5
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCe---eccccC-C--ccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP---VGKPLV-G--VTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~---~~~~i~-~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
+.++.+++.+..|.++ |.... .|+.+++++... ....+. + ...+++....+ .||++-. ...+|++
T Consensus 426 ~~gl~~d~~~~~lY~s-D~~~~---~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~----~~~~I~v 497 (791)
T 3m0c_C 426 VVALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----VLGTVSV 497 (791)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET----TTTEEEE
T ss_pred eEEEeecccCCeeEEe-eccce---eEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec----CCCeEEE
Confidence 3456777766666554 33322 477777765311 011122 1 12347776666 6666532 2347888
Q ss_pred eecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEE
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHF 343 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~l 343 (534)
.++... ..+.+.... -..--++++.+.+.+|+++-.. ....|+++++++.. .+.+....-..- ..+++.++.|
T Consensus 498 ~~ldG~--~~~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~L 572 (791)
T 3m0c_C 498 ADTKGV--KRKTLFREN-GSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRL 572 (791)
T ss_dssp EETTSS--SEEEEEECT-TCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEE
T ss_pred EeCCCC--eEEEEEeCC-CCCcceEEEecCCCCEEEecCC-CCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeE
Confidence 887543 223333321 1112357788988888876422 23578999987654 333433211111 2255668899
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 344 FITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
|+.-. .+.+|.+++++.... ..++... .-....++.+++++||+.-... ..|.+++..+ |+
T Consensus 573 YwaD~----~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~~~lYwtD~~~--~~I~~~dk~t-G~ 634 (791)
T 3m0c_C 573 YWVDS----KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLT-GS 634 (791)
T ss_dssp EEEET----TTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTT--TEEEEEETTT-CC
T ss_pred EEEeC----CCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeCCEEEEEECCC--CEEEEEeCCC-Cc
Confidence 88632 346899999865332 2244321 1123457888899988877544 4677787543 54
No 227
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.53 E-value=1.1 Score=50.59 Aligned_cols=114 Identities=10% Similarity=0.112 Sum_probs=69.8
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc----------c---CCccceeEEccCC-eEEEEEECCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP----------L---VGVTASVEWAGNE-ALVYITMDEI 257 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~----------i---~~~~~~~~Ws~Dg-~l~Y~~~d~~ 257 (534)
.+..+.+||||++||.+.. +| +|+++|+.+++..... . .+....++|+|++ .++.+...+
T Consensus 100 ~V~~v~~sp~g~~l~sgs~-dg----~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d- 173 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGLQ-NG----SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY- 173 (902)
T ss_dssp CEEEEECCTTCSEEEEEET-TS----CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS-
T ss_pred CEEEEEECCCCCEEEEEcC-CC----cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC-
Confidence 4778899999999998755 33 5899999988753111 1 1123459999986 666666432
Q ss_pred CCCceEEEeecCCCCCCceEeeeec-----------------CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC
Q 009441 258 LRPDKAWLHKLEADQSNDICLYHEK-----------------DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~lv~~e~-----------------d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~ 320 (534)
..| .+++.+.. ....+... .......+.++|||++|+..+.+ ..|.+-|+.+++
T Consensus 174 ---g~v-lWd~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D---g~i~lWd~~~g~ 244 (902)
T 2oaj_A 174 ---VTL-TYSLVENE--IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED---NSLVFWDANSGH 244 (902)
T ss_dssp ---CEE-EEETTTTE--EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT---CCEEEEETTTCC
T ss_pred ---CcE-EEECCCCc--eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC---CeEEEEECCCCc
Confidence 356 77776542 12222211 01234568899999987655433 235555665543
No 228
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=92.49 E-value=0.13 Score=52.19 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=38.2
Q ss_pred CCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCC
Q 009441 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE 527 (534)
Q Consensus 481 ~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg 527 (534)
.+.+..+.+.+++.||.+|+++|+.|++. +++.|+||+.||+-+
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vv~~HG~g~ 130 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI---NKPVPAILCIPGSGG 130 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC---CSCEEEEEEECCTTC
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC---CCCccEEEEEcCCCC
Confidence 34678899999999999999999999864 468999999999755
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.23 E-value=4.7 Score=39.20 Aligned_cols=159 Identities=12% Similarity=0.062 Sum_probs=82.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--------------cC-----------------Ccccee
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--------------LV-----------------GVTASV 241 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--------------i~-----------------~~~~~~ 241 (534)
+..+.++|++.+ +|..|..++....|+++|+++|+..... +. ....++
T Consensus 122 ~~~v~vd~~~g~-~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gi 200 (343)
T 2qe8_A 122 VNDLAVDLIHNF-VYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGI 200 (343)
T ss_dssp CCEEEEETTTTE-EEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEE
T ss_pred cceEEEecCCCE-EEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceeccccee
Confidence 466788887664 4555653323457899999887643210 00 012458
Q ss_pred EEccCC-eEEEEEECCCCCCceEEEeecCC---CC-CCc-----eEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEE
Q 009441 242 EWAGNE-ALVYITMDEILRPDKAWLHKLEA---DQ-SND-----ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFV 311 (534)
Q Consensus 242 ~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt---~~-~~d-----~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev 311 (534)
+|+||| .+|+.... ..++|+.+... .. .+. .....+. ..--++++++||+..+. ....+.|
T Consensus 201 a~s~dg~~ly~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~--g~pdgia~d~~G~l~va---~~~~~~V 271 (343)
T 2qe8_A 201 VLDAENEWLYLSPMH----STSMYRIKSADLSNLQLTDAELGSKIERYSEK--PICDGISIDKDHNIYVG---DLAHSAI 271 (343)
T ss_dssp EECTTSCEEEEEESS----CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC--CSCSCEEECTTCCEEEE---EGGGTEE
T ss_pred EeccCCCEEEEEeCC----CCeEEEEEHHHhcCCCCChhhhhcceEecccC--CCCceEEECCCCCEEEE---ccCCCeE
Confidence 999999 56655432 24788876421 10 000 0111111 11113677888864432 2234578
Q ss_pred EEEeCCCCCceeEeeecccc--ee-EEEeeeCCEEEEEEcCC------------CCCccEEEEEeCC
Q 009441 312 FYLDVSKPEELRVLTPRVVG--VD-TAASHRGNHFFITRRSD------------ELFNSELLACPVD 363 (534)
Q Consensus 312 ~~~d~~~~~~~~~l~~~~~g--~~-~~v~~~g~~lyi~tn~~------------~~~~~~L~~~~~~ 363 (534)
++++.++++ +..+...... .. ..+++ ++++|+.++.. ...+++|+++++.
T Consensus 272 ~~~d~~~G~-~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~~~~~f~~~~~~~~~~~~i~~~~~~ 336 (343)
T 2qe8_A 272 GVITSADRA-YKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLHHSAPLNAGENISAPPYYIFRLKPL 336 (343)
T ss_dssp EEEETTTTE-EEEEEECGGGSCEEEEEECT-TSCEEEEECCGGGSGGGBTTCCCCCSCEEEEEECCS
T ss_pred EEEECCCCC-EEEEEECCceecCCeeEECC-CCcEEEEeCccccccccccCCCcCcCCeEEEEEECC
Confidence 888874433 4444322111 11 22444 46788888731 1134677776654
No 230
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=92.20 E-value=0.17 Score=48.39 Aligned_cols=44 Identities=11% Similarity=0.051 Sum_probs=37.8
Q ss_pred CCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 481 ~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
...+..+.+.+++.||.+|+++++.|++ .++.|+||+.||+.+.
T Consensus 51 ~~~~~~~~~~~~~~~g~~i~~~~~~P~~----~~~~p~vv~~HG~~~~ 94 (318)
T 1l7a_A 51 ADGVKVYRLTYKSFGNARITGWYAVPDK----EGPHPAIVKYHGYNAS 94 (318)
T ss_dssp CSSEEEEEEEEEEGGGEEEEEEEEEESS----CSCEEEEEEECCTTCC
T ss_pred CCCeEEEEEEEEccCCCEEEEEEEeeCC----CCCccEEEEEcCCCCC
Confidence 3456789999999999999999999985 3578999999998876
No 231
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.12 E-value=1.2 Score=48.63 Aligned_cols=196 Identities=5% Similarity=0.052 Sum_probs=102.7
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCC---CCeeccccC-Cc--cceeEEccCC-eEEEEEECCCCCCceEEEe
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET---GTPVGKPLV-GV--TASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~t---g~~~~~~i~-~~--~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~ 266 (534)
.++.|++++..|.++ |..+. .|+++++++ +......+. +. ..+++..+.+ .||++- . ...+|++.
T Consensus 409 ~gla~d~~~~~Ly~s-D~~~~---~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD--~--~~~~I~v~ 480 (699)
T 1n7d_A 409 VALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD--S--VLGTVSVA 480 (699)
T ss_dssp CCCEEETTTTEEEEC-CTTTT---SBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECC--T--TTSCEEEE
T ss_pred EEEccccccCeEEEE-ecCCC---eEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEe--c--cCCeEEEE
Confidence 346788877776554 43332 478888875 111111121 11 2346665444 666542 1 23467777
Q ss_pred ecCCCCCCceEeeee--cCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce--eEEEeeeCCE
Q 009441 267 KLEADQSNDICLYHE--KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNH 342 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e--~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~--~~~v~~~g~~ 342 (534)
++.+. ..+.+... ..| -++++++++++|+++.. .....|+++++++.. .+.+....-.. ...+++.+++
T Consensus 481 d~dg~--~~~~l~~~~~~~P---~giavDp~~g~ly~td~-~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~ 553 (699)
T 1n7d_A 481 DTKGV--KRKTLFREQGSKP---RAIVVDPVHGFMYWTDW-GTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGR 553 (699)
T ss_dssp BSSSC--CEEEECCCSSCCC---CCEECCSSSSCCEECCC-SSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCC
T ss_pred ecCCC--ceEEEEeCCCCCc---ceEEEccCCCcEEEccc-CCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCE
Confidence 76543 12233321 112 24677888888776432 223578888776543 22232111110 1236667888
Q ss_pred EEEEEcCCCCCccEEEEEeCCCCCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
||+.-. .+.+|.+++++.... ..++... ......++.+++++||+..... .+|.+++..+ |+
T Consensus 554 LY~aD~----~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~~lywtd~~~--~~V~~~d~~~-G~ 616 (699)
T 1n7d_A 554 LYWVDS----KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLT-GS 616 (699)
T ss_dssp EEEEET----TTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETTEEEEECSTT--TCEEEEETTT-EE
T ss_pred EEEEec----CCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECCEEEEEeCCC--CeEEEEEccC-CC
Confidence 887543 346888988864222 2233211 1112456777888888877543 4688887653 54
No 232
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.02 E-value=4.4 Score=42.38 Aligned_cols=202 Identities=10% Similarity=0.039 Sum_probs=95.3
Q ss_pred EEEEEEECCCC---------CEEEEEEcCC--------------CCeEEEEEEEECCCCCeec---ccc---CCccceeE
Q 009441 192 SVGCFQVSPDN---------KLVAYAEDTK--------------GDEIYTVYVIDIETGTPVG---KPL---VGVTASVE 242 (534)
Q Consensus 192 ~l~~~~~SPDG---------~~LA~~~d~~--------------G~E~~~l~v~dl~tg~~~~---~~i---~~~~~~~~ 242 (534)
.|.++.|+|++ ++||.+.... |+...+|+|+|+++++... ..+ .+....++
T Consensus 135 ~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~ 214 (524)
T 2j04_B 135 LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLK 214 (524)
T ss_dssp --CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEE
T ss_pred ceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEE
Confidence 45667788887 7888877542 3345689999998886421 112 12234589
Q ss_pred EccC------CeEEEEEECCCCCCceEEEeecCCCCCC---------ceEeeeecCCceEEEEEEcCCCcEEEEEecCcc
Q 009441 243 WAGN------EALVYITMDEILRPDKAWLHKLEADQSN---------DICLYHEKDDIYSLGLQASESKKFLFIASESKI 307 (534)
Q Consensus 243 Ws~D------g~l~Y~~~d~~~r~~~v~~~~lgt~~~~---------d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~ 307 (534)
|+|+ +.++.+...+ ..|..+++.++... ....+... ......+.+++++ .|+..+.
T Consensus 215 wsp~~~~~~~~~~LAs~s~D----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h-~~~v~sv~~s~~~-~lasgs~--- 285 (524)
T 2j04_B 215 WHEGCHAPHLVGCLSFVSQE----GTINFLEIIDNATDVHVFKMCEKPSLTLSLA-DSLITTFDFLSPT-TVVCGFK--- 285 (524)
T ss_dssp ECSSCCCSSSSCEEEEEETT----SCEEEEECCCCSSSSSEEECCCSCSEEECCT-TTCEEEEEESSSS-EEEEEET---
T ss_pred ECCCCCCCCCCceEEEEecC----CeEEEEEcCCCccccccceeecCceEEEEcC-CCCEEEEEecCCC-eEEEEeC---
Confidence 9987 3455555432 24555566443211 01122221 2234457788765 4433222
Q ss_pred eeEEEEEeCCCCC-ceeEeeecccceeEEE----eeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeee
Q 009441 308 TRFVFYLDVSKPE-ELRVLTPRVVGVDTAA----SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD 382 (534)
Q Consensus 308 ~~ev~~~d~~~~~-~~~~l~~~~~g~~~~v----~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~ 382 (534)
...|.+.|+.++. ....+...... ...+ .++|.++++.+..+ +.+...|+.++.....+..+.....+..
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~-V~sv~~~~s~~g~~~laS~S~D----~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSY-ILSVSTAYSDFEDTVVSTVAVD----GYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSC-EEEEEEECCTTSCCEEEEEETT----SEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred CCEEEEEECCCCCCceEEeeccccc-EEEEEEEcCCCCCeEEEEeccC----CeEEEEECCCCCcccccccccccCcccc
Confidence 2356777776543 12222222222 2222 23332444433322 3454555543211111222221112455
Q ss_pred EEEeCC-EEEEEEeeCCeeEEEEEECCC
Q 009441 383 IQLFID-HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 383 ~~~~~~-~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+.+.++ ..++....++ .+.++++..
T Consensus 361 v~fsp~~~~l~s~~~d~--tv~lwd~~~ 386 (524)
T 2j04_B 361 VVYCPQIYSYIYSDGAS--SLRAVPSRA 386 (524)
T ss_dssp EEEETTTTEEEEECSSS--EEEEEETTC
T ss_pred eEeCCCcCeEEEeCCCC--cEEEEECcc
Confidence 667663 3455555454 467778764
No 233
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=91.91 E-value=10 Score=37.14 Aligned_cols=151 Identities=6% Similarity=0.065 Sum_probs=86.9
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.++.+.+.++.|.++-...+ .|.+.++++..... .+ .+ ...+++..|++ .+|++-.. ...+|++.++.
T Consensus 119 ~glavd~~~g~ly~~d~~~~----~I~~~~~dG~~~~~-l~~~~l~~P~~iavdp~~g~ly~td~~---~~~~I~r~~~d 190 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTS----RIEVANLDGAHRKV-LLWQSLEKPRAIALHPMEGTIYWTDWG---NTPRIEASSMD 190 (349)
T ss_dssp CEEEEETTTTEEEEEETTTT----EEEEEETTSCSCEE-EECTTCSCEEEEEEETTTTEEEEEECS---SSCEEEEEETT
T ss_pred cEEEEecCCCeEEEEcCCCC----eEEEEcCCCCceEE-EEeCCCCCcceEEEecCcCeEEEeccC---CCCEEEEEeCC
Confidence 45678888888777654332 68888987653221 11 11 23458888876 66665421 23689998875
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcC
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS 349 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~ 349 (534)
.. ..+.+... +-.+--+++++++++.|++.-. ....|+.++.++.. .+.+.....+.-..+...++.+|+.. .
T Consensus 191 G~--~~~~~~~~-~~~~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~-~~~~~~~~~~~P~giav~~~~ly~td-~ 263 (349)
T 3v64_C 191 GS--GRRIIADT-HLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSH-RKAVISQGLPHPFAITVFEDSLYWTD-W 263 (349)
T ss_dssp SC--SCEESCCS-SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTEEEEEE-T
T ss_pred CC--CcEEEEEC-CCCCcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCc-eEEEEeCCCCCceEEEEECCEEEEec-C
Confidence 43 22333221 2223346889998888877533 23578888887643 33333222222233444678887753 2
Q ss_pred CCCCccEEEEEeC
Q 009441 350 DELFNSELLACPV 362 (534)
Q Consensus 350 ~~~~~~~L~~~~~ 362 (534)
.+.+|.+++.
T Consensus 264 ---~~~~V~~~~~ 273 (349)
T 3v64_C 264 ---HTKSINSANK 273 (349)
T ss_dssp ---TTTEEEEEET
T ss_pred ---CCCeEEEEEc
Confidence 2467888874
No 234
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=91.78 E-value=8.2 Score=35.86 Aligned_cols=160 Identities=12% Similarity=0.013 Sum_probs=87.4
Q ss_pred ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 285 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 285 ~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
.|.-++.++. ..|++.......+.|..+|+++++ ...-.+-..... -.+...+++||.++-. +.+++.+|.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgk-v~~~~~l~~~~fgeGi~~~~~~ly~ltw~----~~~v~v~D~~ 93 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGR-ILQRAEVPPPYFGAGIVAWRDRLIQLTWR----NHEGFVYDLA 93 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCC-EEEEEECCTTCCEEEEEEETTEEEEEESS----SSEEEEEETT
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCC-EEEEEeCCCCcceeEEEEeCCEEEEEEee----CCEEEEEECC
Confidence 4555677664 567776666667899999999876 211111111110 1255679999999754 2578888876
Q ss_pred CCCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCC-CccCc
Q 009441 364 NTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFSS 441 (534)
Q Consensus 364 ~~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~-~~~~~ 441 (534)
+..... -++.. +.. ++...++.|++. +|..+|+++|..+ .+.+ +.|.....+..+...| .++.+
T Consensus 94 tl~~~~-ti~~~~~Gw---glt~dg~~L~vS---dgs~~l~~iDp~t-~~~~------~~I~V~~~g~~~~~lNeLe~~~ 159 (243)
T 3mbr_X 94 TLTPRA-RFRYPGEGW---ALTSDDSHLYMS---DGTAVIRKLDPDT-LQQV------GSIKVTAGGRPLDNLNELEWVN 159 (243)
T ss_dssp TTEEEE-EEECSSCCC---EEEECSSCEEEE---CSSSEEEEECTTT-CCEE------EEEECEETTEECCCEEEEEEET
T ss_pred cCcEEE-EEeCCCCce---EEeeCCCEEEEE---CCCCeEEEEeCCC-CeEE------EEEEEccCCcccccceeeEEeC
Confidence 543211 23322 111 233345667765 3677899998875 3422 2333211110111111 11223
Q ss_pred cEEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 442 RILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 442 ~~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
..++.. .+.+ ..|.+.|+++|+..
T Consensus 160 G~lyan--vw~s-~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 160 GELLAN--VWLT-SRIARIDPASGKVV 183 (243)
T ss_dssp TEEEEE--ETTT-TEEEEECTTTCBEE
T ss_pred CEEEEE--ECCC-CeEEEEECCCCCEE
Confidence 455533 3443 47899999999864
No 235
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=91.73 E-value=12 Score=37.51 Aligned_cols=199 Identities=6% Similarity=0.049 Sum_probs=109.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC---eeccccC-C--ccceeEEccCC-eEEEEEECCCCCCceEEE
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT---PVGKPLV-G--VTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~---~~~~~i~-~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~ 265 (534)
+.++.|++.++.|-++ |..+. .|+.++++++. .....+. + ...+++..+.+ .||++-. ...+|++
T Consensus 114 ~~~l~~d~~~~~lyws-D~~~~---~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~----~~~~I~~ 185 (400)
T 3p5b_L 114 VVALDTEVASNRIYWS-DLSQR---MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----VLGTVSV 185 (400)
T ss_dssp EEEEEEETTTTEEEEE-ETTTT---EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET----TTTEEEE
T ss_pred ceEEeeeeccCceEEE-ecCCC---eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC----CCCeEEE
Confidence 4567899888877665 44332 57777877532 1111111 1 12346666544 6766532 1247887
Q ss_pred eecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEE
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHF 343 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~l 343 (534)
.++... ....+..+. -..--++++.+.+.+|+++-.. ....|+.+++++.. .+.+....-..- ..+++.++.|
T Consensus 186 ~~~~g~--~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~-~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 186 ADTKGV--KRKTLFREN-GSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp ECTTTC--SEEEEEECS-SCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEE
T ss_pred EeCCCC--ceEEEEeCC-CCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCc-cEEEEECCCCceEEEEEEeCCCEE
Confidence 777543 223333321 1111256788888888876432 23578999987643 333332211111 2366678899
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 344 FITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
|+.-. .+.+|.+++++.... ..++... .-....++.+++++||+....+ .+|.+++..+ |+
T Consensus 261 Y~aD~----~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~~~~lywtd~~~--~~V~~~~~~~-G~ 322 (400)
T 3p5b_L 261 YWVDS----KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLT-GS 322 (400)
T ss_dssp EEEET----TTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEETTEEEEEESSS--CSEEEEESSS-CC
T ss_pred EEEEC----CCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEeCCEEEEecCCC--CeEEEEEcCC-CC
Confidence 88632 346899999865322 2233321 1123567888999998887543 4688887543 55
No 236
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=91.66 E-value=0.28 Score=47.38 Aligned_cols=44 Identities=7% Similarity=-0.034 Sum_probs=37.7
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
...++.+.++|.+| .++++|+.|++. ..++++|+|++.||+.+.
T Consensus 38 ~g~~~~~~~~s~~~-~~~~~vy~P~~~-~~~~~~Pvlv~lHG~~~~ 81 (297)
T 1gkl_A 38 AGRIVKETYTGING-TKSLNVYLPYGY-DPNKKYNIFYLMHGGGEN 81 (297)
T ss_dssp CCEEEEEEEEETTE-EEEEEEEECTTC-CTTSCCEEEEEECCTTCC
T ss_pred CceEEEEEEEcCCC-EEEEEEEeCCCC-CCCCCCCEEEEECCCCCC
Confidence 34678899999998 999999999998 666789999999998763
No 237
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=91.55 E-value=0.24 Score=48.60 Aligned_cols=46 Identities=15% Similarity=0.015 Sum_probs=39.3
Q ss_pred CCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcCc
Q 009441 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVIF 530 (534)
Q Consensus 481 ~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~~ 530 (534)
...+.++.+.+++.||.+|+++++.|++- ++.|+||+.||+.+...
T Consensus 77 ~~~~~~~~~~~~~~~g~~l~~~~~~P~~~----~~~p~vv~~HG~g~~~~ 122 (346)
T 3fcy_A 77 VSFAECYDLYFTGVRGARIHAKYIKPKTE----GKHPALIRFHGYSSNSG 122 (346)
T ss_dssp BTTEEEEEEEEECGGGCEEEEEEEEESCS----SCEEEEEEECCTTCCSC
T ss_pred CCceEEEEEEEEcCCCCEEEEEEEecCCC----CCcCEEEEECCCCCCCC
Confidence 34678899999999999999999999863 57899999999987653
No 238
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=91.53 E-value=0.23 Score=48.37 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=33.7
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS 525 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGg 525 (534)
..+.++.+.+++.||..|++.++.|++ ++.|+|||.|||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~-----~~~p~vv~~HGg 94 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP-----TPAPVVVYCHAG 94 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC-----SSEEEEEEECCS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC-----CCCcEEEEECCC
Confidence 356789999999999999999998874 468999999985
No 239
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=91.51 E-value=0.21 Score=50.08 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=36.9
Q ss_pred EEEEEEEcC-CCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 486 TERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 486 ~e~v~~~S~-DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
.+.+.+++. ||.++++.|+.|++. ...++.|+||+.||+.+.
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~-~~~~~~Pvvv~lHG~g~~ 186 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDV-NPDRKYPLVVFLHGAGER 186 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSC-CTTSCEEEEEEECCGGGC
T ss_pred ccceeeccCCCCcEEEEEEEcCCCC-CCCCCccEEEEECCCCCC
Confidence 467788999 999999999999987 667889999999999754
No 240
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=91.50 E-value=0.25 Score=48.12 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=33.1
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..+.++.+++++.|| +|++.+++|++. +.|+||+.|||.
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~~-----~~p~vv~~HGgg 97 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQPT-----SQATLYYLHGGG 97 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSSS-----CSCEEEEECCST
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCCC-----CCcEEEEECCCC
Confidence 356679999999999 899999998864 239999999987
No 241
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=91.46 E-value=0.21 Score=50.34 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=37.2
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE 527 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg 527 (534)
+.|..+.+.+++.||..|+++|+.|++. .++.|+||+.||.-+
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~---~~~~P~Vl~~HG~g~ 125 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL---KGAVPGVLCIPGSGR 125 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC---CSCEEEEEEECCTTC
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC---CCCCCEEEEeCCCCC
Confidence 3678899999999999999999999864 468999999999644
No 242
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=91.32 E-value=0.27 Score=46.39 Aligned_cols=45 Identities=13% Similarity=0.053 Sum_probs=36.6
Q ss_pred cEEEEEEEEc-CCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 484 YFTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 484 ~~~e~v~~~S-~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
-.++++.+.| .+|.++++.|+.|++. ..+++.|+|++.||+.+..
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~-~~~~~~P~vv~lHG~~~~~ 58 (280)
T 3ls2_A 13 GWHKQYTHSAVSTHCTMRFAVFLPPGA-SESNKVPVLYWLSGLTCTD 58 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECTTC-BTTBCEEEEEEECCTTCCS
T ss_pred ceEEEEEEechhcCCceEEEEEcCCCC-CCCCCcCEEEEeCCCCCCh
Confidence 3556676766 5899999999999997 6678899999999986643
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.21 E-value=14 Score=38.96 Aligned_cols=62 Identities=8% Similarity=0.072 Sum_probs=40.3
Q ss_pred EEEEEE-C-CCCCEEEEEEc-------------CCCCeEEEEEEEECCCCCeecc-ccCCccceeEEccCCeEEEEEE
Q 009441 193 VGCFQV-S-PDNKLVAYAED-------------TKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITM 254 (534)
Q Consensus 193 l~~~~~-S-PDG~~LA~~~d-------------~~G~E~~~l~v~dl~tg~~~~~-~i~~~~~~~~Ws~Dg~l~Y~~~ 254 (534)
...+.+ + |||++|..+.. ........+-++|.++.+.+.. .+.+...+++-++||..+|++.
T Consensus 136 phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 136 IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEE
T ss_pred CcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEe
Confidence 334565 6 99999865531 1124467899999999887653 2333345688899995555554
No 244
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.21 E-value=11 Score=36.15 Aligned_cols=192 Identities=11% Similarity=0.068 Sum_probs=91.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCe-ecccc-----CCccceeEEccCCeEEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPL-----VGVTASVEWAGNEALVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~-~~~~i-----~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~ 265 (534)
.|..+.+||+ +||-+ +.+ .+|+++|+.+++. +...+ .+....++|+|++.++.+...+ ..|..
T Consensus 16 ~v~~~~~s~~--~las~-~~D----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D----~~v~i 84 (330)
T 2hes_X 16 KIWSFDFSQG--ILATG-STD----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD----STVSI 84 (330)
T ss_dssp CEEEEEEETT--EEEEE-ESS----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT----SCEEE
T ss_pred ceeeeccCCC--EEEEE-cCC----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC----CcEEE
Confidence 3566788888 55544 223 3699999987642 11112 1123459999999655555422 24555
Q ss_pred eecCCCCC---CceE--eeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeE---eeeccccee-EE
Q 009441 266 HKLEADQS---NDIC--LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV---LTPRVVGVD-TA 335 (534)
Q Consensus 266 ~~lgt~~~---~d~l--v~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~---l~~~~~g~~-~~ 335 (534)
+++..... .-.+ .+.. .......+.++|||++|+..+.+ ..|.+.++.... ..+. +......+. ..
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s~D---~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCSRD---KSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETT---SCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEeCC---CEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 55532110 1112 2222 12233467899999988754433 235566663221 1222 222222222 22
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCCCceeeeEEEeCC---EEEEEEeeCCeeEEEE
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFID---HLAVYEREGGLQKITT 404 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~~~~l~~~~~~~~---~lv~~~~~~g~~~l~~ 404 (534)
+.+++..|+.-+. + ..-+|+...- ...... .+..... .+..+.+.++ .+++....++.-+|+-
T Consensus 161 ~~p~~~~l~s~s~-D--~~i~iW~~~~--~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 161 WHPSEALLASSSY-D--DTVRIWKDYD--DDWECVAVLNGHEG-TVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227 (330)
T ss_dssp ECSSSSEEEEEET-T--SCEEEEEEET--TEEEEEEEECCCSS-CEEEEEECCSSSSCEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEEcC-C--CeEEEEECCC--CCeeEEEEccCCCC-cEEEEEecCCCCeeEEEEEeCCCeEEEEE
Confidence 5566665544333 2 2344544321 110011 2332223 4666776653 4566777777555543
No 245
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.19 E-value=2.8 Score=45.69 Aligned_cols=219 Identities=9% Similarity=0.054 Sum_probs=107.7
Q ss_pred EEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecCCC---CCCceEeeee-cCCceEEEE
Q 009441 218 TVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD---QSNDICLYHE-KDDIYSLGL 290 (534)
Q Consensus 218 ~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~---~~~d~lv~~e-~d~~~~v~~ 290 (534)
.|+++++++++.... +.. ...+++|.+++ .||++-. ...+|++.++.+. .....++-.. ..| .++
T Consensus 387 ~I~~id~~~~~~~~~-~~~~~~p~gla~d~~~~~Ly~sD~----~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~gl 458 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGL 458 (699)
T ss_dssp C-CEECTTSCCEECC-SCCCTTCCCCEEETTTTEEEECCT----TTTSBEEEESCCCCC-CCCCCBCCSCC--C---CCE
T ss_pred ceEEEeCCCCcceee-eccCcceEEEccccccCeEEEEec----CCCeEEEEecCCCCCCcceEEEEeCCCCCc---ceE
Confidence 578888887765432 221 22458998876 6665521 2346887777531 1111222111 011 135
Q ss_pred EEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-cce-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCc
Q 009441 291 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (534)
Q Consensus 291 ~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~ 368 (534)
++.+.++.|++.- .....|+++++++.. .+.+.... ... ...+++.++.||+ ++. ..+.+|.+++++....
T Consensus 459 avD~~~g~LY~tD--~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~-td~--~~~~~I~~~~~dG~~~- 531 (699)
T 1n7d_A 459 AVDWIHSNIYWTD--SVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYW-TDW--GTPAKIKKGGLNGVDI- 531 (699)
T ss_dssp ECCCSSSBCEECC--TTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEE-CCC--SSSCCEEBCCSSSCCC-
T ss_pred EEEeeCCcEEEEe--ccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEE-ccc--CCCCeEEEEeCCCCCe-
Confidence 6666566665532 234568888887643 33333211 111 1235566777775 333 2346788887753221
Q ss_pred eEEecCCCCceeeeEEEe--CCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeE-eCCCCccCccEEE
Q 009441 369 TVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI-DPSESVFSSRILR 445 (534)
Q Consensus 369 ~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i-~~~~~~~~~~~l~ 445 (534)
..++... -....++.+. ++.||+.-. +..+|++++++ |... +.+. .... .+ ...+...+++.++
T Consensus 532 ~~l~~~~-l~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~d--G~~~------~~~~-~~~~-~~~~P~glavd~~~ly 598 (699)
T 1n7d_A 532 YSLVTEN-IQWPNGITLDLLSGRLYWVDS--KLHSISSIDVN--GGNR------KTIL-EDEK-RLAHPFSLAVFEDKVF 598 (699)
T ss_dssp CEESCSS-CSSCCCEEECTTTCCEEEEET--TTTEEEEECSS--SSCC------EEEC-CCSS-SCSSCCCCEEETTEEE
T ss_pred eEEEeCC-CCCccEEEEeccCCEEEEEec--CCCeEEEEccC--CCce------EEEE-ecCC-cCCCceEeEEECCEEE
Confidence 2233221 1224466775 457777664 34578999887 5421 1111 0000 00 0112223344555
Q ss_pred EEeccCCCCCeEEEEECCCCcE
Q 009441 446 FHYSSLRTPPSVYDYDMDMGIS 467 (534)
Q Consensus 446 ~~~sS~~~P~~~y~~d~~~~~~ 467 (534)
++- ..-.+|+++|..+|+.
T Consensus 599 wtd---~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 599 WTD---IINEAIFSANRLTGSD 617 (699)
T ss_dssp EEC---STTTCEEEEETTTEEE
T ss_pred EEe---CCCCeEEEEEccCCCc
Confidence 443 2336788888777663
No 246
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.14 E-value=10 Score=35.72 Aligned_cols=256 Identities=11% Similarity=0.011 Sum_probs=124.2
Q ss_pred CCCCCEEEEEE-cCCCCeEEEEEEEECCCCCeecc-ccC--CccceeEEccCCeEEEEE-ECCCCCCceEEEeecCCCCC
Q 009441 199 SPDNKLVAYAE-DTKGDEIYTVYVIDIETGTPVGK-PLV--GVTASVEWAGNEALVYIT-MDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 199 SPDG~~LA~~~-d~~G~E~~~l~v~dl~tg~~~~~-~i~--~~~~~~~Ws~Dg~l~Y~~-~d~~~r~~~v~~~~lgt~~~ 273 (534)
+-+++.++|+- ..++.....++++|+.+++.... .++ ...... -.-++.+|... .+.......++++++.+...
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVAS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccE-EEECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 34556666653 33334445788999988864321 222 222212 22355665553 22222335788888876530
Q ss_pred C-ceEeeeecCCceEEEEEEcCCCcEEEEEecC--cceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcC
Q 009441 274 N-DICLYHEKDDIYSLGLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (534)
Q Consensus 274 ~-d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~--~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~ 349 (534)
. =..+-.-+.+....... .-+++..++.-.. ...+++++.|..+.. |..+.+...... ......++.+|++...
T Consensus 91 ~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGAT-TLGDMIYVSGGFDGSRRHTSMERYDPNIDQ-WSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CCCEEECCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTE-EEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred CeeEECCCCCCCccceeEE-EECCEEEEEcccCCCcccceEEEEcCCCCe-EEECCCCCCCcccceEEEECCEEEEECCC
Confidence 0 01121111222222222 2255544433221 224689999988765 655543221111 1222347889988654
Q ss_pred CC-CCccEEEEEeCCCCCCceE-EecCCCC-ceeeeEEEeCCEEEEEEeeCC---eeEEEEEECCCCCCcccccCCCcee
Q 009441 350 DE-LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQLFIDHLAVYEREGG---LQKITTYRLPAVGEPLKSLQGGKSV 423 (534)
Q Consensus 350 ~~-~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~~g~~~~~~~~~~~i 423 (534)
++ .....+...|+.+ ..| .++.-+. ..-..+...++.|++..-.++ ...++++++.+ +.+ ..+
T Consensus 169 ~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W-------~~~ 237 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHT---GHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRT-DSW-------TTV 237 (301)
T ss_dssp CSSCBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT-TEE-------EEE
T ss_pred CCCcccceEEEEeCCC---CcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCC-CcE-------EEC
Confidence 21 1235677788654 467 4433221 122344556888888764433 34688899875 332 122
Q ss_pred e-ecCceeeEeCCCCccCccEEEEEeccCC---CCCeEEEEECCCCcEEEEEE
Q 009441 424 E-FIDPVYSIDPSESVFSSRILRFHYSSLR---TPPSVYDYDMDMGISVLKKI 472 (534)
Q Consensus 424 ~-lp~~~~~i~~~~~~~~~~~l~~~~sS~~---~P~~~y~~d~~~~~~~~~~~ 472 (534)
. +|..-..... ... ++.+++ +.+.. .-..++.||+++++++.+..
T Consensus 238 ~~~p~~r~~~~~--~~~-~~~i~v-~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 238 TSMTTPRCYVGA--TVL-RGRLYA-IAGYDGNSLLSSIECYDPIIDSWEVVTS 286 (301)
T ss_dssp CCCSSCCBSCEE--EEE-TTEEEE-ECCBCSSSBEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCcccceeE--EEE-CCEEEE-EcCcCCCcccccEEEEcCCCCeEEEcCC
Confidence 1 2221110000 011 223333 22222 12578999999998876653
No 247
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=90.99 E-value=9.7 Score=35.22 Aligned_cols=232 Identities=10% Similarity=0.051 Sum_probs=112.7
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC--C-ccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV--G-VTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~--~-~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.+++||+.++ +...+| .|+++|.+ |+.....++ . ....+++.++|.+|++... ...|++++.
T Consensus 58 ~~~~i~~~~~g~l~v-~~~~~~----~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~d~ 127 (299)
T 2z2n_A 58 KVMCLTISSDGEVWF-TENAAN----KIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN----GNRIGRITD 127 (299)
T ss_dssp CEEEEEECTTSCEEE-EETTTT----EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT----TTEEEEECT
T ss_pred ceeeEEECCCCCEEE-eCCCCC----eEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC----CceEEEECC
Confidence 356678999998433 322222 47788876 543221222 1 2345788888877766422 346887776
Q ss_pred CCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEe-eecccceeEE--EeeeCCEEE
Q 009441 269 EADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL-TPRVVGVDTA--ASHRGNHFF 344 (534)
Q Consensus 269 gt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l-~~~~~g~~~~--v~~~g~~ly 344 (534)
++. ...+... .......+..+++|+..+. .. ....|+.++. ++. +..+ .+........ ++++ +.+|
T Consensus 128 -~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~--~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~-g~l~ 197 (299)
T 2z2n_A 128 -DGK---IREYELPNKGSYPSFITLGSDNALWFT-EN--QNNAIGRITE-SGD-ITEFKIPTPASGPVGITKGND-DALW 197 (299)
T ss_dssp -TCC---EEEEECSSTTCCEEEEEECTTSCEEEE-ET--TTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTT-SSEE
T ss_pred -CCC---EEEecCCCCCCCCceEEEcCCCCEEEE-eC--CCCEEEEEcC-CCc-EEEeeCCCCCCcceeEEECCC-CCEE
Confidence 331 1222111 1122335678889865443 21 2346888887 443 3322 1111111122 3333 4577
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCcee
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 423 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i 423 (534)
+.+.. ...|.+++. +........+. ....+.++.+.+ +.|++....+ ..|.+++.+ |.. ..+
T Consensus 198 v~~~~----~~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~d~~--g~~-------~~~ 260 (299)
T 2z2n_A 198 FVEII----GNKIGRITT-SGEITEFKIPT-PNARPHAITAGAGIDLWFTEWGA--NKIGRLTSN--NII-------EEY 260 (299)
T ss_dssp EEETT----TTEEEEECT-TCCEEEEECSS-TTCCEEEEEECSTTCEEEEETTT--TEEEEEETT--TEE-------EEE
T ss_pred EEccC----CceEEEECC-CCcEEEEECCC-CCCCceeEEECCCCCEEEeccCC--ceEEEECCC--Cce-------EEE
Confidence 76642 246888876 33221112222 223466777764 4676665333 357778774 541 233
Q ss_pred eecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCc
Q 009441 424 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (534)
Q Consensus 424 ~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~ 466 (534)
.++.....+..... ....+++.-+ ...++++++++++
T Consensus 261 ~~~~~~~~~~~i~~--~~g~l~v~~~----~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 261 PIQIKSAEPHGICF--DGETIWFAME----CDKIGKLTLIKDN 297 (299)
T ss_dssp ECSSSSCCEEEEEE--CSSCEEEEET----TTEEEEEEEC---
T ss_pred eCCCCCCccceEEe--cCCCEEEEec----CCcEEEEEcCccc
Confidence 33321111111111 2345655532 2578888876554
No 248
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.79 E-value=12 Score=36.04 Aligned_cols=198 Identities=9% Similarity=0.078 Sum_probs=113.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CC--ccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
..++.|++.+..|-++ |..+. .|+.++++++......+ .+ ...+++..+.+ .+|++-. ...+|++.++
T Consensus 37 ~~~ld~d~~~~~lyw~-D~~~~---~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~----~~~~I~~~~~ 108 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWS-DVSEE---AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS----ETNRIEVSNL 108 (318)
T ss_dssp EEEEEEEGGGTEEEEE-ETTTT---EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET----TTTEEEEEET
T ss_pred cEEEEEEeCCCEEEEE-ECCCC---cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC----CCCEEEEEEC
Confidence 4456788877776555 54443 58888888764211111 11 22457777655 6666532 1347888887
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEEEEE
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFIT 346 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~lyi~ 346 (534)
... ....+..+ .-..--++++.+.+.+|+++-.. ....|+.+++++.. .+.+....-..- ..++++++.||+.
T Consensus 109 dG~--~~~~l~~~-~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 109 DGS--LRKVLFWQ-ELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp TSC--SCEEEECS-SCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCC--cEEEEEeC-CCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEE
Confidence 543 22333321 11112356778888888775422 34679999887643 233332111111 2366678899876
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
-. .+.+|.+++++... .+.++... .....++.++++.||+....+ .+|.+++..+ |+
T Consensus 184 D~----~~~~I~~~d~dG~~-~~~~~~~~-~~~P~glav~~~~lywtd~~~--~~V~~~~~~~-G~ 240 (318)
T 3sov_A 184 DA----KLNFIHKSNLDGTN-RQAVVKGS-LPHPFALTLFEDILYWTDWST--HSILACNKYT-GE 240 (318)
T ss_dssp ET----TTTEEEEEETTSCS-CEEEECSC-CSCEEEEEEETTEEEEEETTT--TEEEEEETTT-CC
T ss_pred EC----CCCEEEEEcCCCCc-eEEEecCC-CCCceEEEEeCCEEEEEecCC--CeEEEEECCC-CC
Confidence 33 35789999986432 22244322 234678888899998885543 4788888754 55
No 249
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=90.69 E-value=11 Score=35.38 Aligned_cols=175 Identities=6% Similarity=0.008 Sum_probs=89.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC-C-ccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-G-VTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~-~-~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
+....++|||+.|+ +. + ..++.+|. +|+.+-. ... + ....+.+++||.+++..... ..+|+..+..
T Consensus 39 ~~~~~~~pdG~ilv-s~----~--~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~---~~~v~~vd~~ 107 (276)
T 3no2_A 39 CNSVAATKAGEILF-SY----S--KGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH---PSTILEVNMK 107 (276)
T ss_dssp CCEEEECTTSCEEE-EC----B--SEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST---TEEEEEECTT
T ss_pred CcCeEECCCCCEEE-eC----C--CCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCC---CCEEEEEeCC
Confidence 34567899999888 31 1 24888998 7876542 222 1 12357889999777775431 2344444321
Q ss_pred CCCCCceEeee----ec--CC-ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeecccceeEEEe-eeC
Q 009441 270 ADQSNDICLYH----EK--DD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAAS-HRG 340 (534)
Q Consensus 270 t~~~~d~lv~~----e~--d~-~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~~~g~~~~v~-~~g 340 (534)
+ .++.+ .. .+ .....+..++||++++... ....|+.++.+ ++ .|+ + ... +..+.+. ..+
T Consensus 108 -G----k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---~~~~v~~~d~~-G~~~w~-~-~~~-~~~~~~~~~~~ 175 (276)
T 3no2_A 108 -G----EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---ATSEVREIAPN-GQLLNS-V-KLS-GTPFSSAFLDN 175 (276)
T ss_dssp -S----CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET---TTTEEEEECTT-SCEEEE-E-ECS-SCCCEEEECTT
T ss_pred -C----CEEEEEeccCCCCcccccccCceECCCCCEEEEec---CCCEEEEECCC-CCEEEE-E-ECC-CCccceeEcCC
Confidence 1 11211 00 00 0111245688999876433 23578889887 44 222 1 111 1122221 224
Q ss_pred CEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC--C---CceeeeEEEeC-CEEEEEEe
Q 009441 341 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHR--E---SVKLQDIQLFI-DHLAVYER 395 (534)
Q Consensus 341 ~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~--~---~~~l~~~~~~~-~~lv~~~~ 395 (534)
+.+++.... +.+|+.++.++.+ ..|-+... + -..+..+.... +.+++...
T Consensus 176 g~~~v~~~~----~~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 176 GDCLVACGD----AHCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEECBT----TSEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEeCC----CCeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 455554432 3579999876543 45633321 1 12245555543 46666554
No 250
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=90.67 E-value=0.44 Score=46.78 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=38.3
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..+..+.+.+++.||.++.++++.|++. ..++.|+||+.||+.|..
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~~--~~~~~p~vv~~hG~~~~~ 109 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKNR--GGDRLPAIVIGGPFGAVK 109 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESSC--CSSCEEEEEEECCTTCCT
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCCC--CCCCCCEEEEECCCCCcc
Confidence 3467899999999999999999999873 346789999999987643
No 251
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=90.61 E-value=15 Score=36.71 Aligned_cols=175 Identities=9% Similarity=0.018 Sum_probs=97.2
Q ss_pred EEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCC--CCceEeeeecCCceEEEEEE
Q 009441 218 TVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ--SNDICLYHEKDDIYSLGLQA 292 (534)
Q Consensus 218 ~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~--~~d~lv~~e~d~~~~v~~~~ 292 (534)
.|+.+|+++++... .+.+ ...+++|.+.+ .+|++-.. ..+|++..+.... .....+... ....-.++++
T Consensus 93 ~I~~i~l~~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD~~----~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glav 166 (400)
T 3p5b_L 93 EVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLS----QRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAV 166 (400)
T ss_dssp EEEEECTTSCSCEE-EECSCSCEEEEEEETTTTEEEEEETT----TTEEEEEEC------CCCEEEECS-SCSCEEEEEE
T ss_pred eeEEEccCCcceeE-eccccCcceEEeeeeccCceEEEecC----CCeEEEEEcccCCCCCcceEEEeC-CCCCcccEEE
Confidence 68888988775433 2222 22458998766 77776422 2478888875421 122333321 1112235677
Q ss_pred cCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-ccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE
Q 009441 293 SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 370 (534)
Q Consensus 293 S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~ 370 (534)
.+.++.|++.-.. ...|.++++++.. .+.+.... .... ..+++.++.||+. +. ..+.+|.+++++... ...
T Consensus 167 D~~~~~lY~~d~~--~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~t-d~--~~~~~I~~~~~dG~~-~~~ 239 (400)
T 3p5b_L 167 DWIHSNIYWTDSV--LGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWT-DW--GTPAKIKKGGLNGVD-IYS 239 (400)
T ss_dssp ETTTTEEEEEETT--TTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEE-EC--SSSCCEEEEETTSCS-CEE
T ss_pred EecCCceEEEECC--CCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEE-eC--CCCCEEEEEeCCCCc-cEE
Confidence 7767777665332 3478888887653 33333321 1111 2356667888764 43 234689999886432 222
Q ss_pred EecCCCCceeeeEEEe--CCEEEEEEeeCCeeEEEEEECC
Q 009441 371 LIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 371 li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~~l~ 408 (534)
++... -....++.+. ++.||+.-. +..+|++++++
T Consensus 240 ~~~~~-l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~d 276 (400)
T 3p5b_L 240 LVTEN-IQWPNGITLDLLSGRLYWVDS--KLHSISSIDVN 276 (400)
T ss_dssp EECSS-CSCEEEEEEETTTTEEEEEET--TTTEEEEEETT
T ss_pred EEECC-CCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCC
Confidence 44332 2245677776 467877754 34579999988
No 252
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=90.55 E-value=0.28 Score=46.24 Aligned_cols=45 Identities=9% Similarity=0.000 Sum_probs=36.5
Q ss_pred cEEEEEEEEc-CCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 484 YFTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 484 ~~~e~v~~~S-~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..++++.+.| .+|.++++.|+.|++. ..+++.|+||+.||+.+..
T Consensus 15 g~~~~~~~~s~~~g~~~~~~v~~P~~~-~~~~~~p~vv~lHG~~~~~ 60 (280)
T 3i6y_A 15 GWHKQYSHVSNTLNCAMRFAIYLPPQA-STGAKVPVLYWLSGLTCSD 60 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGG-GTTCCEEEEEEECCTTCCS
T ss_pred CcEEEEEEeccccCCeeEEEEEeCCCC-CCCCCccEEEEecCCCCCh
Confidence 3556666665 5899999999999987 6678899999999987653
No 253
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.54 E-value=9.6 Score=38.67 Aligned_cols=155 Identities=10% Similarity=0.043 Sum_probs=82.1
Q ss_pred EEEEEEECCC--CCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCCeEEEEEECCCCC-CceEEEe
Q 009441 192 SVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILR-PDKAWLH 266 (534)
Q Consensus 192 ~l~~~~~SPD--G~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r-~~~v~~~ 266 (534)
....+.++|+ +.. +|..|.. ..|+.+|+++|+.... +.. ...+++|+++|.+ |.+...... ...++..
T Consensus 140 ~P~gvavd~~s~~g~-Lyv~D~~----~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~l-yVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDD-LYWVGQR----DAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDM-VVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCCEEEECTTTTTCE-EEEECBT----SCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCE-EEEECCSCTTSEEEEEE
T ss_pred CCceEEEccccCCCE-EEEEeCC----CCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCE-EEEcCCCCcccceEEEE
Confidence 4456789995 333 4555654 4799999988876542 222 2346899999984 554322111 2334444
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCce-eEeee-ccccee--EEEeeeCCE
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL-RVLTP-RVVGVD--TAASHRGNH 342 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~-~~l~~-~~~g~~--~~v~~~g~~ 342 (534)
...........+ .... .-.++++.+++..|++.. ..+..|+.++.+++. . ..+.. ...+.. ..++++|+.
T Consensus 213 ~~~~~~~~~~~~-~~~~--~P~giavd~~~G~lyv~d--~~~~~V~~~d~~~g~-~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 213 TRASGFTERLSL-CNAR--GAKTCAVHPQNGKIYYTR--YHHAMISSYDPATGT-LTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp CGGGTTCCEEEE-EECS--SBCCCEECTTTCCEEECB--TTCSEEEEECTTTCC-EEEEEEECSCCSSCEEEEECTTSSE
T ss_pred ECCCCeeccccc-cccC--CCCEEEEeCCCCeEEEEE--CCCCEEEEEECCCCe-EEEEEeccCCCCCcccEEEeCCCCE
Confidence 432221111111 1111 112356778455555532 334578999887554 3 22221 111112 336777888
Q ss_pred EEEEEcCCCCCccEEEEEeCC
Q 009441 343 FFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 343 lyi~tn~~~~~~~~L~~~~~~ 363 (534)
||+.-. .+.+|.+++++
T Consensus 287 LYvad~----~~~~I~~~~~d 303 (433)
T 4hw6_A 287 AYIIYN----GKHCIYRVDYN 303 (433)
T ss_dssp EEEEET----TTTEEEEEEBC
T ss_pred EEEEeC----CCCEEEEEeCC
Confidence 887653 24678887764
No 254
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.32 E-value=1.7 Score=41.82 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=57.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec-cccC---CccceeEEccC--CeEEEEEECCCCCCceEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLV---GVTASVEWAGN--EALVYITMDEILRPDKAWL 265 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~-~~i~---~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v~~ 265 (534)
.|..+++||||++||-+.. + .+++|+|+.+++... ..+. +....++|+++ +.++.+...+ ..|..
T Consensus 15 ~V~~v~~s~~g~~lasgs~-D----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D----~~v~i 85 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSS-D----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD----RKVII 85 (316)
T ss_dssp CEEEEEECGGGCEEEEEET-T----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT----SCEEE
T ss_pred eEEEeeEcCCCCEEEEEeC-C----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC----CEEEE
Confidence 4677899999999987643 2 379999998875321 1222 22345899863 5555665422 35666
Q ss_pred eecCCCCCCceEeeeecCCceEEEEEEcCC--CcEEEEE
Q 009441 266 HKLEADQSNDICLYHEKDDIYSLGLQASES--KKFLFIA 302 (534)
Q Consensus 266 ~~lgt~~~~d~lv~~e~d~~~~v~~~~S~D--g~~l~i~ 302 (534)
+++.++.......+.. .......+.++|| |.+|+..
T Consensus 86 Wd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 86 WREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp ECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEE
T ss_pred EECCCCcceEEEEccC-CCCceEEEEECCCCCCcEEEEE
Confidence 6765542222222322 1222235678887 6665543
No 255
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=90.31 E-value=8.9 Score=37.13 Aligned_cols=125 Identities=10% Similarity=0.119 Sum_probs=66.5
Q ss_pred EEEEEEECCCCCEEEEEEcC-CCCeEEEEEEEECCCCCeecc-----ccC-C--ccceeEEccCCeEEEEEECC-CCCCc
Q 009441 192 SVGCFQVSPDNKLVAYAEDT-KGDEIYTVYVIDIETGTPVGK-----PLV-G--VTASVEWAGNEALVYITMDE-ILRPD 261 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~-~G~E~~~l~v~dl~tg~~~~~-----~i~-~--~~~~~~Ws~Dg~l~Y~~~d~-~~r~~ 261 (534)
....+.+||||+.++-.... +|. .+|..++ +|+..+- ... . ...++++.++|.+|.+-... .....
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CcceEEECCCCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 35677899999864322111 232 5677777 5654411 000 1 12458898888776653210 00135
Q ss_pred eEEEeecCCCCCCceEeeeec---CCceEEEEEEcCCCcEEEEEecC-cceeEEEEEeCCCCC
Q 009441 262 KAWLHKLEADQSNDICLYHEK---DDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE 320 (534)
Q Consensus 262 ~v~~~~lgt~~~~d~lv~~e~---d~~~~v~~~~S~Dg~~l~i~~~~-~~~~ev~~~d~~~~~ 320 (534)
+|+++++.++.....+-+.+. ...+.-++.+++++.++++.-.+ .....|+++++.++.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 788888876521111111111 11233457788877777665432 245678888887543
No 256
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=90.13 E-value=0.59 Score=43.84 Aligned_cols=45 Identities=9% Similarity=-0.095 Sum_probs=36.8
Q ss_pred CcEEEEEEEEcC-CCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 483 NYFTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 483 ~~~~e~v~~~S~-DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
...++++.+.|. +|..+++.|+.|++. ..+++.|+|++.||+.+.
T Consensus 29 ~g~~~~~~~~s~~~~~~~~~~v~~P~~~-~~~~~~P~vv~lHG~g~~ 74 (268)
T 1jjf_A 29 RGQVVNISYFSTATNSTRPARVYLPPGY-SKDKKYSVLYLLHGIGGS 74 (268)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTC-CTTSCBCEEEEECCTTCC
T ss_pred CceEEEEEEeccccCCceEEEEEeCCCC-CCCCCccEEEEECCCCCC
Confidence 346677777765 689999999999987 667889999999998754
No 257
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.08 E-value=26 Score=38.61 Aligned_cols=156 Identities=12% Similarity=0.015 Sum_probs=89.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
..++++.+.|+.|.++-...+ .|++.++++.........+ ...+++..|.+ .||++-. ....+|++..+.
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~----~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~---g~~~~I~~~~~d 545 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLG----TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW---GTPAKIKKGGLN 545 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTT----EEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC---SSSCEEEEEETT
T ss_pred cceeeeeecCCcEEEEecCCC----eEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecC---CCCCeEEEEecC
Confidence 345788888888776644333 6899999865432211112 12457787775 6666542 223578888875
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc--eeEEEeeeCCEEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITR 347 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g--~~~~v~~~g~~lyi~t 347 (534)
.. ..+.+... +-.+=.+++++++++.|++.- .....|+.+++++.. .+.+...... .-+.+...+++||+.
T Consensus 546 G~--~~~~lv~~-~l~~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~~~lYwt- 618 (791)
T 3m0c_C 546 GV--DIYSLVTE-NIQWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWT- 618 (791)
T ss_dssp SC--CEEEEECS-SCSCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEETTEEEEE-
T ss_pred CC--ceEEEEeC-CCCCceEEEEecCCCeEEEEe--CCCCcEEEEecCCCc-eEEEecCCCccCCCCEEEEeCCEEEEE-
Confidence 43 22233321 212233577888888887753 234578999987654 3334332111 123466678888864
Q ss_pred cCCCCCccEEEEEeCCCC
Q 009441 348 RSDELFNSELLACPVDNT 365 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~ 365 (534)
+. .+.+|.+++..++
T Consensus 619 D~---~~~~I~~~dk~tG 633 (791)
T 3m0c_C 619 DI---INEAIFSANRLTG 633 (791)
T ss_dssp ET---TTTEEEEEETTTC
T ss_pred EC---CCCEEEEEeCCCC
Confidence 33 3478888886544
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=89.49 E-value=16 Score=36.94 Aligned_cols=156 Identities=16% Similarity=0.112 Sum_probs=81.8
Q ss_pred EEEEEEECC-CCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC--ccceeEEccCCeEEEEEECCCCCC-ceEEEee
Q 009441 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRP-DKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SP-DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg~l~Y~~~d~~~r~-~~v~~~~ 267 (534)
....+.++| ++.. +|.+|.. ..|+++|+++++.... +.. ....++|+++|..+|++....... ..++...
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~----~~I~~id~~~~~v~~~-~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQ----HPTRLIDFEKEYVSTV-YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBT----EEEEEEETTTTEEEEE-ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCCe-EEEEeCC----CcEEEEECCCCEEEEE-ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 445678898 4544 5666654 6799999988765332 222 234599999996445553322222 2344444
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccc--ee-EEEeeeCCEEE
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VD-TAASHRGNHFF 344 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g--~~-~~v~~~g~~ly 344 (534)
..........+-.-..| .++++++++.+|++... ....|+.++.++.. ...+.....+ .. ..++++|+.||
T Consensus 212 ~~g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~--~~~~V~~~~~~~~~-~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 212 RESGFKVITELTKGQNC---NGAETHPINGELYFNSW--NAGQVFRYDFTTQE-TTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp GGGTSCSEEEEEECSSC---CCEEECTTTCCEEEEET--TTTEEEEEETTTTE-EEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred CCCceeeeeeeccCCCc---eEEEEeCCCCEEEEEEC--CCCEEEEEECCCCc-EEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 32221111122111112 23567885555665432 34578999887653 2222221111 11 23667787788
Q ss_pred EEEcCCCCCccEEEEEeCC
Q 009441 345 ITRRSDELFNSELLACPVD 363 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~ 363 (534)
+.-. .+.+|.+++.+
T Consensus 286 v~d~----~~~~I~~~~~d 300 (430)
T 3tc9_A 286 IVVV----NQHYILRSDYD 300 (430)
T ss_dssp EEET----TTTEEEEEEEE
T ss_pred EEEC----CCCEEEEEeCC
Confidence 7643 23577777654
No 259
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=89.35 E-value=9.3 Score=38.21 Aligned_cols=107 Identities=9% Similarity=0.123 Sum_probs=59.6
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~ 273 (534)
..+++.+.. +|.. ..+| +|+++|++++.... ...++ ..++|+|+| +.+...| ..+..++..+.+.
T Consensus 130 ~~i~~~~p~--~av~-~~dG----~L~v~dl~~~~~~~-~~~~V-s~v~WSpkG-~~vg~~d-----g~i~~~~~~~~~~ 194 (388)
T 1xip_A 130 FQLKNVNNT--LVIL-NSVN----DLSALDLRTKSTKQ-LAQNV-TSFDVTNSQ-LAVLLKD-----RSFQSFAWRNGEM 194 (388)
T ss_dssp EEEEECSSE--EEEE-ETTS----EEEEEETTTCCEEE-EEESE-EEEEECSSE-EEEEETT-----SCEEEEEEETTEE
T ss_pred eeEEecCCC--EEEE-ECCC----CEEEEEccCCcccc-ccCCc-eEEEEcCCc-eEEEEcC-----CcEEEEcCCCccc
Confidence 345555542 4443 3344 69999999887643 23344 459999998 4444333 2344444433221
Q ss_pred CceEee------ee--cCCceEEEEEEcCCCcEEEEEecCcc--------eeEEEEEe
Q 009441 274 NDICLY------HE--KDDIYSLGLQASESKKFLFIASESKI--------TRFVFYLD 315 (534)
Q Consensus 274 ~d~lv~------~e--~d~~~~v~~~~S~Dg~~l~i~~~~~~--------~~ev~~~d 315 (534)
.....+ ++ .++....++.|.++++|+++...... ...+|++.
T Consensus 195 ~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~ 252 (388)
T 1xip_A 195 EKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIK 252 (388)
T ss_dssp EEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEE
T ss_pred cccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEE
Confidence 001112 21 12333447899999999987764321 33688887
No 260
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=89.33 E-value=0.44 Score=46.21 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=36.0
Q ss_pred CCcEEEEEEEEcCCCc-eecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGT-QIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~-~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..+.++.+.+++.||. +|++.++.|++. .++.|+||+.|||.
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~---~~~~p~vv~~HGgg 89 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT---AGPVPVLLWIHGGG 89 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC---CSCEEEEEEECCST
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC---CCCCcEEEEECCCc
Confidence 4677899999999998 999999999853 35789999999986
No 261
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=89.25 E-value=13 Score=34.20 Aligned_cols=237 Identities=15% Similarity=0.073 Sum_probs=118.0
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+.++.+++||+.++ + +..+ ..|.++|.+ |+.....++ .....+++.++|.++++... ...|++++.
T Consensus 16 ~~~~i~~d~~g~l~v-~-~~~~---~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~~~ 85 (299)
T 2z2n_A 16 GPYGITVSDKGKVWI-T-QHKA---NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA----ANKIGRITK 85 (299)
T ss_dssp CEEEEEECTTSCEEE-E-ETTT---TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT----TTEEEEECT
T ss_pred CccceEECCCCCEEE-E-ecCC---CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC----CCeEEEECC
Confidence 466778899998443 3 3222 258888888 665432222 12345888888887776521 236777765
Q ss_pred CCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEee-ecccceeEE--EeeeCCEEE
Q 009441 269 EADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDTA--ASHRGNHFF 344 (534)
Q Consensus 269 gt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~-~~~~g~~~~--v~~~g~~ly 344 (534)
. + ....+..+ ....-..+..++||+..+. ... ...++.++. ++. ...+. +........ +++ ++.+|
T Consensus 86 ~-g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~--~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~~~-~g~l~ 155 (299)
T 2z2n_A 86 K-G---IIKEYTLPNPDSAPYGITEGPNGDIWFT-EMN--GNRIGRITD-DGK-IREYELPNKGSYPSFITLGS-DNALW 155 (299)
T ss_dssp T-S---CEEEEECSSTTCCEEEEEECTTSCEEEE-ETT--TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECT-TSCEE
T ss_pred C-C---cEEEEeCCCcCCCceeeEECCCCCEEEE-ecC--CceEEEECC-CCC-EEEecCCCCCCCCceEEEcC-CCCEE
Confidence 4 1 12222211 1123335677888875433 221 346788887 333 33222 111111122 333 35777
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCcee
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 423 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i 423 (534)
+.+.. ...|.+++. +........+.. ...+.++.+.. +.|++.....+ .|.+++.. |.. ..+
T Consensus 156 v~~~~----~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~--~i~~~~~~--g~~-------~~~ 218 (299)
T 2z2n_A 156 FTENQ----NNAIGRITE-SGDITEFKIPTP-ASGPVGITKGNDDALWFVEIIGN--KIGRITTS--GEI-------TEF 218 (299)
T ss_dssp EEETT----TTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTTT--EEEEECTT--CCE-------EEE
T ss_pred EEeCC----CCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECCCCCEEEEccCCc--eEEEECCC--CcE-------EEE
Confidence 76542 257888876 322211112322 22466677654 46666654333 67888773 552 123
Q ss_pred eecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEE
Q 009441 424 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (534)
Q Consensus 424 ~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~ 470 (534)
.++.....+..+..+.++ .+++.-. ....++.+|+ +++...+
T Consensus 219 ~~~~~~~~~~~i~~~~~g-~l~v~~~---~~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGI-DLWFTEW---GANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp ECSSTTCCEEEEEECSTT-CEEEEET---TTTEEEEEET-TTEEEEE
T ss_pred ECCCCCCCceeEEECCCC-CEEEecc---CCceEEEECC-CCceEEE
Confidence 333111111111223333 3555432 2467899998 5654433
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=89.13 E-value=17 Score=35.08 Aligned_cols=156 Identities=8% Similarity=0.072 Sum_probs=89.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CC--ccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
..++.+.+.++.|.++-...+ .|.+.++++..... .+ .+ ...+++..|.+ .+|++-.. ...+|++.++
T Consensus 81 p~glavd~~~g~ly~~d~~~~----~I~~~~~dG~~~~~-l~~~~~~~P~giavdp~~g~ly~td~~---~~~~I~r~~~ 152 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETN----RIEVSNLDGSLRKV-LFWQELDQPRAIALDPSSGFMYWTDWG---EVPKIERAGM 152 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTT----EEEEEETTSCSCEE-EECSSCSSEEEEEEEGGGTEEEEEECS---SSCEEEEEET
T ss_pred ccEEEEEcCCCeEEEEECCCC----EEEEEECCCCcEEE-EEeCCCCCccEEEEeCCCCEEEEEecC---CCCEEEEEEc
Confidence 345678887887766644322 68888987643221 11 11 12457787765 66655321 2357998887
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEc
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRR 348 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn 348 (534)
... ..+.+... +-.+--+++++++++.|++.-. ....|+.+++++.. .+.+.....+.-..+..+++.+|+. +
T Consensus 153 dG~--~~~~~~~~-~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~~~lywt-d 225 (318)
T 3sov_A 153 DGS--SRFIIINS-EIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFEDILYWT-D 225 (318)
T ss_dssp TSC--SCEEEECS-SCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEEECSCCSCEEEEEEETTEEEEE-E
T ss_pred CCC--CeEEEEEC-CCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeCCEEEEE-e
Confidence 533 22333321 1122336789998888877532 34578999987643 3444432222223455568888876 4
Q ss_pred CCCCCccEEEEEeCCCCC
Q 009441 349 SDELFNSELLACPVDNTS 366 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~ 366 (534)
. .+.+|.+++..+++
T Consensus 226 ~---~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 226 W---STHSILACNKYTGE 240 (318)
T ss_dssp T---TTTEEEEEETTTCC
T ss_pred c---CCCeEEEEECCCCC
Confidence 3 34689888875443
No 263
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.10 E-value=14 Score=34.23 Aligned_cols=186 Identities=10% Similarity=0.046 Sum_probs=96.1
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc--ccCCccceeEEcc-CCeEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAG-NEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~--~i~~~~~~~~Ws~-Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
+..+.+ ++++|+.+.. +| .++++| .++.+.. ...+....+.|.+ ++.++++...+ ..|..++.+
T Consensus 107 i~~~~~--~~~~l~~~~~-d~----~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~i~i~d~~ 173 (313)
T 3odt_A 107 VCSLSF--QDGVVISGSW-DK----TAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD----KTIKLWQND 173 (313)
T ss_dssp EEEEEE--ETTEEEEEET-TS----EEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT----SCEEEEETT
T ss_pred EEEEEe--cCCEEEEEeC-CC----CEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECC----CCEEEEecC
Confidence 444555 7788776644 33 588898 4444321 1122234578887 66555554332 246666633
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEc
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn 348 (534)
. ....+..........+.++++++ ++.... ...+++.++..++....+......+. ..+++++ .|+..+.
T Consensus 174 ~----~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 244 (313)
T 3odt_A 174 K----VIKTFSGIHNDVVRHLAVVDDGH-FISCSN---DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGE 244 (313)
T ss_dssp E----EEEEECSSCSSCEEEEEEEETTE-EEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEET
T ss_pred c----eEEEEeccCcccEEEEEEcCCCe-EEEccC---CCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEec
Confidence 2 22334332333445678899998 443322 23578888876542222322222222 2245555 4433222
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
++.|...++.+... ...+..... .+..+.+..+.-++....+| .|+++++..
T Consensus 245 -----dg~v~iwd~~~~~~-~~~~~~~~~-~i~~~~~~~~~~~~~~~~dg--~i~iw~~~~ 296 (313)
T 3odt_A 245 -----DRTVRIWSKENGSL-KQVITLPAI-SIWSVDCMSNGDIIVGSSDN--LVRIFSQEK 296 (313)
T ss_dssp -----TSEEEEECTTTCCE-EEEEECSSS-CEEEEEECTTSCEEEEETTS--CEEEEESCG
T ss_pred -----CCEEEEEECCCCce-eEEEeccCc-eEEEEEEccCCCEEEEeCCC--cEEEEeCCC
Confidence 35677777765432 123333322 47888887643244566666 467778774
No 264
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.06 E-value=21 Score=38.79 Aligned_cols=162 Identities=9% Similarity=0.055 Sum_probs=84.7
Q ss_pred EEECCCCCE----EEEEEcCCCCeEEEEEEEECCC--CCeeccccCCccceeEEccCCeEEEEEECC------CCCCceE
Q 009441 196 FQVSPDNKL----VAYAEDTKGDEIYTVYVIDIET--GTPVGKPLVGVTASVEWAGNEALVYITMDE------ILRPDKA 263 (534)
Q Consensus 196 ~~~SPDG~~----LA~~~d~~G~E~~~l~v~dl~t--g~~~~~~i~~~~~~~~Ws~Dg~l~Y~~~d~------~~r~~~v 263 (534)
...++|+++ +.++... +.....++++|++. |+.....++.- ..+.+..++.+|+....+ .....+|
T Consensus 245 ~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (711)
T 4hvt_A 245 AGKLLSDTISSSLIFISANK-DFYNYDNYILDTKYKNLKLQKINMPSD-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSL 322 (711)
T ss_dssp EEESSCTTTCSSEEEEEEES-SSSCEEEEEEECSSSSCEEEECCSCTT-CEEEEEETTEEEEECSSCEEETTEEECTTCE
T ss_pred EEEecCCCceEEEEEEEEec-ccCceeEEEEcCCCCCCcceEeecCCc-ceEeeeECCEEEEEECcccccccccCCCCeE
Confidence 457888885 3443322 23346788888764 55433333332 235677777665543211 0123578
Q ss_pred EEeecCCCC------CCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeE-e-eecccceeE
Q 009441 264 WLHKLEADQ------SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV-L-TPRVVGVDT 334 (534)
Q Consensus 264 ~~~~lgt~~------~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~-l-~~~~~g~~~ 334 (534)
+..++.++. .+-+.++........-++.++.| +|++.......+.++++++.++. ..+. + .+. .+...
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~ 399 (711)
T 4hvt_A 323 VALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIF 399 (711)
T ss_dssp EEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEE
T ss_pred EEEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEE
Confidence 888886531 22234454322223335677765 56666666667789999876542 1222 2 221 22221
Q ss_pred --EEeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 335 --AASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 335 --~v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
.+..+++.+++.... -..-..++.+++.
T Consensus 400 ~~~~~~~~~~~~~~~ss-~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 400 GMSSYEEEEEALITIEN-SIVPPTIYLWVKT 429 (711)
T ss_dssp EEECCTTCSCEEEEEEC-SSSCCEEEEECTT
T ss_pred EEeecCcCCEEEEEEec-CCCCCEEEEEeCC
Confidence 133456666665543 2333577877765
No 265
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=88.91 E-value=0.51 Score=45.37 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=33.8
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS 525 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGg 525 (534)
....++.+.+++.|| +|++.++.|++. .++.|+||+.|||
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~---~~~~p~vv~~HGG 83 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV---EPPYPALVYYHGG 83 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC---CSSEEEEEEECCS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC---CCCCCEEEEECCC
Confidence 356788999999999 999999999863 3568999999995
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=88.85 E-value=4.4 Score=41.13 Aligned_cols=117 Identities=11% Similarity=0.145 Sum_probs=66.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec-cccC--CccceeEEccC-CeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLV--GVTASVEWAGN-EALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~-~~i~--~~~~~~~Ws~D-g~l~Y~~~d~~~r~~~v~~~~ 267 (534)
....+.+++||++|.++-..+|.....+.+++.++ .... ..+. ....++++.|+ |.+|++.. ...+|++++
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~~l~~~~~p~giavdp~~g~lyv~d~----~~~~V~~~~ 254 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVITELTKGQNCNGAETHPINGELYFNSW----NAGQVFRYD 254 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSEEEEEECSSCCCEEECTTTCCEEEEET----TTTEEEEEE
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeeeeeeccCCCceEEEEeCCCCEEEEEEC----CCCEEEEEE
Confidence 35667899999977776554554444566666543 2221 1111 12245889984 47766642 235899988
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~ 317 (534)
..+.. -..++......+-..+++++||++|++... ....|+.++.+
T Consensus 255 ~~~~~--~~~~~~~~~~~~P~gia~~pdG~~lyv~d~--~~~~I~~~~~d 300 (430)
T 3tc9_A 255 FTTQE--TTPLFTIQDSGWEFHIQFHPSGNYAYIVVV--NQHYILRSDYD 300 (430)
T ss_dssp TTTTE--EEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEE
T ss_pred CCCCc--EEEEEEcCCCCcceeEEEcCCCCEEEEEEC--CCCEEEEEeCC
Confidence 76442 113333222222235788999998877543 23456666654
No 267
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=88.66 E-value=16 Score=34.36 Aligned_cols=158 Identities=10% Similarity=0.070 Sum_probs=85.0
Q ss_pred ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCC
Q 009441 285 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 364 (534)
Q Consensus 285 ~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~ 364 (534)
.|.-++.++ ++.|++....... |..+|+++++-.+.+.+... .--.+..++++||+++-. ..+++.+|.++
T Consensus 55 ~ftqGL~~~--~~~Ly~stG~~g~--v~~iD~~Tgkv~~~~l~~~~-FgeGit~~g~~Ly~ltw~----~~~v~V~D~~T 125 (268)
T 3nok_A 55 AFTQGLVFH--QGHFFESTGHQGT--LRQLSLESAQPVWMERLGNI-FAEGLASDGERLYQLTWT----EGLLFTWSGMP 125 (268)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTE--EEECCSSCSSCSEEEECTTC-CEEEEEECSSCEEEEESS----SCEEEEEETTT
T ss_pred cccceEEEE--CCEEEEEcCCCCE--EEEEECCCCcEEeEECCCCc-ceeEEEEeCCEEEEEEcc----CCEEEEEECCc
Confidence 355566654 5677765554333 89999988761222232210 001156789999998753 25788888865
Q ss_pred CCCceEEecCC-CCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccCCCceeeecCceeeEeCCC-CccCcc
Q 009441 365 TSETTVLIPHR-ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFSSR 442 (534)
Q Consensus 365 ~~~~~~li~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i~lp~~~~~i~~~~-~~~~~~ 442 (534)
.+... -++.. +. -++...++.|++. +|..+|+++|..+ .+.+ +.|........+...| .++.+.
T Consensus 126 l~~~~-ti~~~~eG---wGLt~Dg~~L~vS---dGs~~l~~iDp~T-~~v~------~~I~V~~~g~~v~~lNeLe~~dG 191 (268)
T 3nok_A 126 PQRER-TTRYSGEG---WGLCYWNGKLVRS---DGGTMLTFHEPDG-FALV------GAVQVKLRGQPVELINELECANG 191 (268)
T ss_dssp TEEEE-EEECSSCC---CCEEEETTEEEEE---CSSSEEEEECTTT-CCEE------EEEECEETTEECCCEEEEEEETT
T ss_pred CcEEE-EEeCCCce---eEEecCCCEEEEE---CCCCEEEEEcCCC-CeEE------EEEEeCCCCcccccccccEEeCC
Confidence 43211 22221 11 1344456777776 3677899998775 4432 2343221111111001 112233
Q ss_pred EEEEEeccCCCCCeEEEEECCCCcEE
Q 009441 443 ILRFHYSSLRTPPSVYDYDMDMGISV 468 (534)
Q Consensus 443 ~l~~~~sS~~~P~~~y~~d~~~~~~~ 468 (534)
.++. +.+.. ..|.+.|+++|+..
T Consensus 192 ~lya--nvw~s-~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 192 VIYA--NIWHS-SDVLEIDPATGTVV 214 (268)
T ss_dssp EEEE--EETTC-SEEEEECTTTCBEE
T ss_pred EEEE--EECCC-CeEEEEeCCCCcEE
Confidence 5554 33444 48999999999854
No 268
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.56 E-value=17 Score=34.46 Aligned_cols=70 Identities=16% Similarity=0.066 Sum_probs=40.7
Q ss_pred EEEEEEECC--CCCEEEEEEcCCCCeEEEEEEEECCCCCeec-ccc---CCccceeEEccC--CeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSP--DNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPL---VGVTASVEWAGN--EALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SP--DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~-~~i---~~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v 263 (534)
.|..+.|+| +|++||-+.. +| +++|+|+.+|+... ..+ ......++|+|+ |.++.+...+ ..|
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~-D~----~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D----~~i 129 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSY-DR----KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD----GAI 129 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEET-TS----CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS----SCE
T ss_pred cEEEEEeCCCCCCCEEEEEEC-CC----EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC----CCE
Confidence 466788987 4887775533 33 69999999875221 112 222345999998 4455554322 245
Q ss_pred EEeecCC
Q 009441 264 WLHKLEA 270 (534)
Q Consensus 264 ~~~~lgt 270 (534)
..+++.+
T Consensus 130 ~lwd~~~ 136 (316)
T 3bg1_A 130 SLLTYTG 136 (316)
T ss_dssp EEEEECS
T ss_pred EEEecCC
Confidence 5555543
No 269
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.55 E-value=16 Score=34.20 Aligned_cols=94 Identities=12% Similarity=0.098 Sum_probs=52.8
Q ss_pred EEEEEEECCC--CCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc---CCccceeEEccC--CeEEEEEECCCCCCceE
Q 009441 192 SVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL---VGVTASVEWAGN--EALVYITMDEILRPDKA 263 (534)
Q Consensus 192 ~l~~~~~SPD--G~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i---~~~~~~~~Ws~D--g~l~Y~~~d~~~r~~~v 263 (534)
.|..+.|||+ |++||-+.. + .+++|+|+.+|+.... .+ ......++|+|+ |.++.+...+ ..|
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~-D----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d----~~v 125 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSY-D----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD----GKV 125 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEET-T----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT----SEE
T ss_pred CeEEEEecCCCcCCEEEEEcC-C----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC----CcE
Confidence 4667889874 888876543 3 3799999998853211 11 122345999998 5555555332 356
Q ss_pred EEeecCCCCCCceEeeeecCCceEEEEEEcCC
Q 009441 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASES 295 (534)
Q Consensus 264 ~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~D 295 (534)
..+++.+........+.. .......+.++|+
T Consensus 126 ~~wd~~~~~~~~~~~~~~-h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 126 SVVEFKENGTTSPIIIDA-HAIGVNSASWAPA 156 (297)
T ss_dssp EEEEBCSSSCBCCEEEEC-CSSCEEEEEECCC
T ss_pred EEEEecCCCceeeeeeec-ccCccceEeecCC
Confidence 666765442111233332 2222335677776
No 270
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.21 E-value=24 Score=36.49 Aligned_cols=160 Identities=15% Similarity=0.148 Sum_probs=85.7
Q ss_pred EEEEEEECC-CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC--C--ccceeEE-------ccCCeEEEEEECCCC
Q 009441 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV--G--VTASVEW-------AGNEALVYITMDEIL 258 (534)
Q Consensus 192 ~l~~~~~SP-DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~--~--~~~~~~W-------s~Dg~l~Y~~~d~~~ 258 (534)
....+.++| ++..|-++.+ . ...|+++|++++..... ... + ....++| +++|..+|++.+..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~-~---~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYD-G---HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEE-T---EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEEC-C---CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 356678999 4665544443 2 25799999998876432 111 1 1345889 999954455543322
Q ss_pred C---CceEEEeecCC-CCCC---ceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC-------CCCc---
Q 009441 259 R---PDKAWLHKLEA-DQSN---DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS-------KPEE--- 321 (534)
Q Consensus 259 r---~~~v~~~~lgt-~~~~---d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~-------~~~~--- 321 (534)
+ ...|++..... +.-. +...+..-... ..+.+.+++++|++.... ...|+.++++ ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p--~giavdp~~g~LYvtd~~--~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQC--NGATIHPINGELYFNSYE--KGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCC--CCEEECTTTCCEEEEETT--TTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CcccCceEEEEecCCCCceeecccceeeccCCCc--eEEEEcCCCCeEEEEECC--CCEEEEEecccccccccCceeecc
Confidence 2 23577665432 1111 11122221111 245778988888775543 3468999986 3321
Q ss_pred --------eeEeeeccc-ceeEE--EeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 322 --------LRVLTPRVV-GVDTA--ASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 322 --------~~~l~~~~~-g~~~~--v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
...+..... +..+. ++++|+.||+.-. .+.+|.+++.+
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~----~~h~I~kid~d 340 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI----NNHYFMRSDYD 340 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET----TTTEEEEEEEE
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC----CCCEEEEEecC
Confidence 112222211 22233 6677887877543 34688887653
No 271
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=88.07 E-value=0.86 Score=44.37 Aligned_cols=40 Identities=23% Similarity=0.163 Sum_probs=33.4
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
....++.+.+++.|| +|++.++.|++- ++.|+||+.|||-
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~~----~~~p~vv~~HGGg 100 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKTQ----GPYGVLVYYHGGG 100 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSSC----SCCCEEEEECCST
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCCC----CCCcEEEEECCCc
Confidence 456789999999998 899999988752 5689999999964
No 272
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=88.02 E-value=9.1 Score=37.84 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=23.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCe
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP 229 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~ 229 (534)
+..+.|+|++..+..+.+.+| +|+++|+.+++.
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~----~v~~wd~~t~~~ 221 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNG----NIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTS----EEEEEETTCCC-
T ss_pred cEEEEECCCCCceEEecCCCC----EEEEEECCCCcc
Confidence 557899999875555544444 799999998864
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.00 E-value=19 Score=34.42 Aligned_cols=173 Identities=9% Similarity=0.034 Sum_probs=95.9
Q ss_pred EEEEEECCCCCeeccccCC--ccceeEEccCC-eEEEEEECCCCCCceEEEeecCCCC--CCceEeeee--cCCceEEEE
Q 009441 218 TVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ--SNDICLYHE--KDDIYSLGL 290 (534)
Q Consensus 218 ~l~v~dl~tg~~~~~~i~~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt~~--~~d~lv~~e--~d~~~~v~~ 290 (534)
.|+.+|+++++... .++. ...+++|.+++ .+|++-. ...+|++.++.+.. .....+... ..| .++
T Consensus 11 ~I~~i~~~~~~~~~-~~~~~~~p~g~~~d~~~~~ly~~D~----~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~gl 82 (316)
T 1ijq_A 11 EVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDL----SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGL 82 (316)
T ss_dssp SEEEEETTSCCCEE-EECSCSSEEEEEEETTTTEEEEEET----TTTEEEEEEC--------CEEEECSSCSCC---CEE
T ss_pred eEEEEECCCcceEe-hhcCCCceEEEEEEeCCCEEEEEEC----CCCcEEEEECCCCCCCcccEEEEeCCCCCc---CEE
Confidence 37888998876543 2222 12458998876 7777642 23578888875410 112233321 112 245
Q ss_pred EEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc-ccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCc
Q 009441 291 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (534)
Q Consensus 291 ~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~-~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~ 368 (534)
++++.++.|++.-.. ...|.++++++.. .+.+.... .... ..+++.++.+|+.. . + .+.+|.+++++... .
T Consensus 83 avd~~~~~ly~~d~~--~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d-~-~-~~~~I~~~~~dG~~-~ 155 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSV--LGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTD-W-G-TPAKIKKGGLNGVD-I 155 (316)
T ss_dssp EEETTTTEEEEEETT--TTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEE-C-S-SSCEEEEEETTSCC-E
T ss_pred EEeecCCeEEEEECC--CCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEc-c-C-CCCeEEEEcCCCCC-e
Confidence 667767777665332 3567888887643 33333311 1111 22556688888753 3 2 34789999876422 2
Q ss_pred eEEecCCCCceeeeEEEe--CCEEEEEEeeCCeeEEEEEECC
Q 009441 369 TVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 369 ~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~~l~ 408 (534)
..++... -....++.+. ++.||+.-.. ..+|.+++++
T Consensus 156 ~~~~~~~-~~~P~gla~d~~~~~lY~~D~~--~~~I~~~d~d 194 (316)
T 1ijq_A 156 YSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDVN 194 (316)
T ss_dssp EEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEETT
T ss_pred EEEEECC-CCCceEEEEeccCCEEEEEECC--CCeEEEEecC
Confidence 2233322 2245677776 4678877643 3579999988
No 274
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=87.91 E-value=23 Score=35.24 Aligned_cols=189 Identities=15% Similarity=0.144 Sum_probs=96.0
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccc--cCCccceeEEccCCeEEEEEECCCCCCceEEEeecCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~--i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
+..+.+ ++++|+.+.. + .+|+++|+.+++.+... -......+.| ++.++++...+ ..|..+++.+
T Consensus 202 v~~~~~--~~~~l~s~s~-d----g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~iwd~~~ 268 (445)
T 2ovr_B 202 VRCMHL--HEKRVVSGSR-D----ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD----FMVKVWDPET 268 (445)
T ss_dssp EEEEEE--ETTEEEEEET-T----SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT----SCEEEEEGGG
T ss_pred EEEEEe--cCCEEEEEeC-C----CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC----CEEEEEECCC
Confidence 444444 4666665533 2 37999999998865421 1112234666 66444554332 3566677655
Q ss_pred CCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcCC
Q 009441 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 350 (534)
Q Consensus 271 ~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~~ 350 (534)
+. ....+.. .......+.+ |+++++....+ ..+.+.++.++.....+. ...+....+..+++.++..+.
T Consensus 269 ~~--~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~-- 337 (445)
T 2ovr_B 269 ET--CLHTLQG-HTNRVYSLQF--DGIHVVSGSLD---TSIRVWDVETGNCIHTLT-GHQSLTSGMELKDNILVSGNA-- 337 (445)
T ss_dssp TE--EEEEECC-CSSCEEEEEE--CSSEEEEEETT---SCEEEEETTTCCEEEEEC-CCCSCEEEEEEETTEEEEEET--
T ss_pred Cc--EeEEecC-CCCceEEEEE--CCCEEEEEeCC---CeEEEEECCCCCEEEEEc-CCcccEEEEEEeCCEEEEEeC--
Confidence 41 1122221 1122223444 88887665443 347777887654122222 222223335556775554443
Q ss_pred CCCccEEEEEeCCCCCCceEEecC--CCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCc
Q 009441 351 ELFNSELLACPVDNTSETTVLIPH--RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 413 (534)
Q Consensus 351 ~~~~~~L~~~~~~~~~~~~~li~~--~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~ 413 (534)
++.|...++.+.... ..+.. .....+..+.+.++. ++....+| .|.++++.+ |+.
T Consensus 338 ---dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-l~s~~~dg--~v~iwd~~~-~~~ 394 (445)
T 2ovr_B 338 ---DSTVKIWDIKTGQCL-QTLQGPNKHQSAVTCLQFNKNF-VITSSDDG--TVKLWDLKT-GEF 394 (445)
T ss_dssp ---TSCEEEEETTTCCEE-EEECSTTSCSSCEEEEEECSSE-EEEEETTS--EEEEEETTT-CCE
T ss_pred ---CCeEEEEECCCCcEE-EEEccCCCCCCCEEEEEECCCE-EEEEeCCC--eEEEEECCC-Cce
Confidence 245666676543321 12221 123347777775554 45555566 467778875 553
No 275
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=87.88 E-value=0.67 Score=44.58 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=32.7
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
...++.+.+++.|| +|++.++.|++- ++.|+||+.|||-
T Consensus 48 ~~~~~~~~i~~~~g-~~~~~~~~P~~~----~~~p~vv~~HGgg 86 (313)
T 2wir_A 48 IHRVEDITIPGRGG-PIRARVYRPRDG----ERLPAVVYYHGGG 86 (313)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECSCC----SSEEEEEEECCST
T ss_pred CceEEEEEeeCCCC-cEEEEEEecCCC----CCccEEEEECCCc
Confidence 44678899999999 999999998753 3579999999974
No 276
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.77 E-value=19 Score=34.20 Aligned_cols=159 Identities=12% Similarity=0.071 Sum_probs=80.5
Q ss_pred ceeEEcc-CCeEEEEEECCCCCCceEEEeecCCCCCCceEeeeecC-C--ceEEEEEEcC-CCcEEEEEecC--------
Q 009441 239 ASVEWAG-NEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKD-D--IYSLGLQASE-SKKFLFIASES-------- 305 (534)
Q Consensus 239 ~~~~Ws~-Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d-~--~~~v~~~~S~-Dg~~l~i~~~~-------- 305 (534)
.++++.+ +|.+|..... ..+++.+..++. -+.+....+ . .+.-++.+.+ ||+..+.....
T Consensus 83 ~gi~~~~~~g~l~v~d~~-----~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY-----YHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEEEEETTTTEEEEEETT-----TEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred ceEEEcCCCCcEEEEECC-----CCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccc
Confidence 3477886 5566555321 346666654321 122221111 1 1233578889 88744433221
Q ss_pred ------cceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecCCCC
Q 009441 306 ------KITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRES 377 (534)
Q Consensus 306 ------~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~~~~ 377 (534)
.....|+.++.+++. ...+....... ...++++|+.+|+.-. .+.+|.+++++....... ++...+.
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~-~~~~~~~~~~p~gia~~~dg~~lyv~d~----~~~~I~~~~~~~~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKE-TTLLLKELHVPGGAEVSADSSFVLVAEF----LSHQIVKYWLEGPKKGTAEVLVKIPN 230 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTE-EEEEEEEESCCCEEEECTTSSEEEEEEG----GGTEEEEEESSSTTTTCEEEEEECSS
T ss_pred eehcccCCCceEEEEeCCCCE-EEEeccCCccCcceEECCCCCEEEEEeC----CCCeEEEEECCCCcCCccceEEeCCC
Confidence 123578999876653 33332211111 1235667777876543 246888888764322222 2222222
Q ss_pred ceeeeEEEeC-CEEEEEEee--------CCeeEEEEEECCCCCCc
Q 009441 378 VKLQDIQLFI-DHLAVYERE--------GGLQKITTYRLPAVGEP 413 (534)
Q Consensus 378 ~~l~~~~~~~-~~lv~~~~~--------~g~~~l~~~~l~~~g~~ 413 (534)
..++.+.. +.|++.... .....|.+++.+ |+.
T Consensus 231 --P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~ 271 (322)
T 2fp8_A 231 --PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GNI 271 (322)
T ss_dssp --EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SCE
T ss_pred --CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC--CCE
Confidence 56677664 467766654 123467777765 663
No 277
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=87.70 E-value=0.43 Score=45.31 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=35.9
Q ss_pred EEEEEEEEcC-CCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 485 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 485 ~~e~v~~~S~-DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..+.+.+.|. +|.+++++|+.|++. ..++++|+|++.||+.
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~-~~~~~~Pvl~~lhG~~ 58 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQP-APDSGYPVIYVLDGNA 58 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSC-CCTTCEEEEEEESHHH
T ss_pred CceEEEEEecCCCCEEEEEEECCCCC-CCCCCccEEEEecChH
Confidence 4678888887 799999999999998 6678899999999984
No 278
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=87.27 E-value=19 Score=33.59 Aligned_cols=161 Identities=8% Similarity=0.088 Sum_probs=82.1
Q ss_pred EEEEEEECCCCCEEEEEEcCCC-----------CeEEEEEEEECCCCCeeccccC--CccceeEEc----cCCeEEEEEE
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKG-----------DEIYTVYVIDIETGTPVGKPLV--GVTASVEWA----GNEALVYITM 254 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G-----------~E~~~l~v~dl~tg~~~~~~i~--~~~~~~~Ws----~Dg~l~Y~~~ 254 (534)
.+..+.++|||+.++-. ...+ .....|+.+|.+ |+.... .. ....+++|+ +||..+|...
T Consensus 118 ~~~~i~~d~~g~l~v~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITA-PAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCCEEEECTTSCEEEEE-CBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred CCcCEEECCCCCEEEEe-cCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEE
Confidence 35677899999754432 2111 012468888876 654321 11 123458999 9984444442
Q ss_pred CCCCCCceEEEeecC-CCCCCceEeeee-cCC--ceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccc
Q 009441 255 DEILRPDKAWLHKLE-ADQSNDICLYHE-KDD--IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV 330 (534)
Q Consensus 255 d~~~r~~~v~~~~lg-t~~~~d~lv~~e-~d~--~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~ 330 (534)
. ...+|+++++. ++......++.. ... ..-..+.+++||+..+.... .+.|++++.+++.....+.-...
T Consensus 195 ~---~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~---~~~i~~~d~~~g~~~~~~~~~~~ 268 (314)
T 1pjx_A 195 T---PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG---SSHIEVFGPDGGQPKMRIRCPFE 268 (314)
T ss_dssp T---TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET---TTEEEEECTTCBSCSEEEECSSS
T ss_pred C---CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC---CCEEEEEcCCCCcEeEEEeCCCC
Confidence 2 12478777754 221011112221 111 22335778899975543322 34678888764331222211111
Q ss_pred cee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCC
Q 009441 331 GVD-TAASHRGNHFFITRRSDELFNSELLACPVDNT 365 (534)
Q Consensus 331 g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~ 365 (534)
... ..++++|+.||+.++. +..|++++++..
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~----~~~l~~~~~~~~ 300 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHE----NNAVWKFEWQRN 300 (314)
T ss_dssp CEEEEEECTTSSEEEEEETT----TTEEEEEECSSC
T ss_pred CceeEEECCCCCEEEEEeCC----CCeEEEEeCCCC
Confidence 111 2245677778877653 257888887543
No 279
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=86.90 E-value=0.85 Score=48.35 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=33.1
Q ss_pred cEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 484 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 484 ~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
+..+.+.++++||++|.+.|+.|++. ++.|+||..| +||..
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~~----~~~P~vl~~~-pyg~~ 79 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNKD----GKFPVVMSAD-TYGKD 79 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSSS----SCEEEEEEEE-SSCTT
T ss_pred EEEEEEEEECCCCcEEEEEEEecCCC----CCCCEEEEec-CCCCC
Confidence 45678999999999999999999863 6899999854 45544
No 280
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=86.48 E-value=0.95 Score=43.38 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=33.1
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
....++.+.+++.|| +|++.+++|++- ++.|+||+.|||-
T Consensus 44 ~~~~~~~~~i~~~~g-~i~~~~~~p~~~----~~~p~vv~~HGgg 83 (311)
T 2c7b_A 44 PIAETRDVHIPVSGG-SIRARVYFPKKA----AGLPAVLYYHGGG 83 (311)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEESSSC----SSEEEEEEECCST
T ss_pred CcceEEEEEecCCCC-cEEEEEEecCCC----CCCcEEEEECCCc
Confidence 345788999999999 999999988753 3579999999975
No 281
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=85.71 E-value=1.2 Score=41.81 Aligned_cols=43 Identities=7% Similarity=-0.058 Sum_probs=33.7
Q ss_pred EEEEEEEEc-CCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 485 FTERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 485 ~~e~v~~~S-~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..+++.+.| .+|.++++.|+.|++. . +++.|+|++.||+.+..
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~p~vv~lHG~~~~~ 64 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNP-E-NRPLGVIYWLSGLTCTE 64 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCT-T-CCCEEEEEEECCTTCCS
T ss_pred cEEEEEEechhhCCceEEEEEeCCCC-C-CCCCCEEEEEcCCCCCc
Confidence 445554444 5799999999999987 4 67899999999987653
No 282
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.74 E-value=31 Score=33.63 Aligned_cols=117 Identities=9% Similarity=0.045 Sum_probs=61.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCee--cc-cc----CCccceeEEccC---CeEEEEEE-CC-CCCC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GK-PL----VGVTASVEWAGN---EALVYITM-DE-ILRP 260 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~--~~-~i----~~~~~~~~Ws~D---g~l~Y~~~-d~-~~r~ 260 (534)
...+.++|||+ +|..+..| .|++++ +|+.. .+ .+ .+...+++++|| ++.+|+.. .. ....
T Consensus 33 P~~ia~~pdG~--l~V~e~~g----~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 33 PWALAFLPDGG--MLIAERPG----RIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp EEEEEECTTSC--EEEEETTT----EEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred ceEEEEcCCCe--EEEEeCCC----eEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 45678999998 34445444 577777 44321 11 11 112346999998 53334432 11 1112
Q ss_pred ceEEEeecCCCCC-CceEeeee-c---CC-ceEEEEEEcCCCcEEEEEecCcc-----------eeEEEEEeCCC
Q 009441 261 DKAWLHKLEADQS-NDICLYHE-K---DD-IYSLGLQASESKKFLFIASESKI-----------TRFVFYLDVSK 318 (534)
Q Consensus 261 ~~v~~~~lgt~~~-~d~lv~~e-~---d~-~~~v~~~~S~Dg~~l~i~~~~~~-----------~~ev~~~d~~~ 318 (534)
.+|+++++..+.. +.+.++.. + .. .+--.+.+++|| +|+++..+.. ...|+.++.++
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 5788887753211 12334432 1 11 111257889999 5777653221 24788887764
No 283
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=84.56 E-value=24 Score=32.36 Aligned_cols=237 Identities=11% Similarity=-0.008 Sum_probs=116.9
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
...++.+++||+..+ .+..+ ..|.++|.+ |+.....++ .....+++.++|.+|+... ....|++++.
T Consensus 21 ~p~~i~~d~~g~l~v--~~~~~---~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~~~v~~~d~ 90 (300)
T 2qc5_A 21 GPYGITSSEDGKVWF--TQHKA---NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN----GANKIGKLSK 90 (300)
T ss_dssp CEEEEEECTTSCEEE--EETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET----TTTEEEEECT
T ss_pred CcceeeECCCCCEEE--EcCCC---CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec----CCCeEEEECC
Confidence 355678899998433 23222 257888887 665432222 1234578888887766642 1246777765
Q ss_pred CCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEe-eecccceeEE--EeeeCCEEE
Q 009441 269 EADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL-TPRVVGVDTA--ASHRGNHFF 344 (534)
Q Consensus 269 gt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l-~~~~~g~~~~--v~~~g~~ly 344 (534)
. +. ...+... ....-..+..+++|+..+... ....|+.++.+ +. ...+ .+........ ++++| .+|
T Consensus 91 ~-g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~---~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~d~~g-~l~ 160 (300)
T 2qc5_A 91 K-GG---FTEYPLPQPDSGPYGITEGLNGDIWFTQL---NGDRIGKLTAD-GT-IYEYDLPNKGSYPAFITLGSDN-ALW 160 (300)
T ss_dssp T-SC---EEEEECSSTTCCEEEEEECSTTCEEEEET---TTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTS-SEE
T ss_pred C-CC---eEEecCCCCCCCCccceECCCCCEEEEcc---CCCeEEEECCC-CC-EEEccCCCCCCCceeEEECCCC-CEE
Confidence 4 21 1222211 112233567788887544322 13467888876 33 3322 1211111122 34444 477
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCcccccCCCcee
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 423 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~~~~~i 423 (534)
+.+.. +.+|.+++.. ........+. ....+.++.+.. +.|++....++ .|.+++.. |.. ..+
T Consensus 161 v~~~~----~~~i~~~~~~-g~~~~~~~~~-~~~~~~~i~~d~~g~l~v~~~~~~--~i~~~~~~--g~~-------~~~ 223 (300)
T 2qc5_A 161 FTENQ----NNSIGRITNT-GKLEEYPLPT-NAAAPVGITSGNDGALWFVEIMGN--KIGRITTT--GEI-------SEY 223 (300)
T ss_dssp EEETT----TTEEEEECTT-CCEEEEECSS-TTCCEEEEEECTTSSEEEEETTTT--EEEEECTT--CCE-------EEE
T ss_pred EEecC----CCeEEEECCC-CcEEEeeCCC-CCCCcceEEECCCCCEEEEccCCC--EEEEEcCC--CcE-------EEE
Confidence 76542 2568888762 2221112222 223466777664 46766654333 57777764 552 122
Q ss_pred eecCceeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEE
Q 009441 424 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (534)
Q Consensus 424 ~lp~~~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~ 470 (534)
.++........+..+.++ .++++-. ....++++|. +++....
T Consensus 224 ~~~~~~~~~~~i~~d~~g-~l~v~~~---~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNS-EIWFTEW---GANQIGRITN-DNTIQEY 265 (300)
T ss_dssp ECSSTTCCEEEEEECSTT-CEEEEET---TTTEEEEECT-TSCEEEE
T ss_pred ECCCCCCCceEEEECCCC-CEEEecc---CCCeEEEECC-CCcEEEE
Confidence 232111111111223333 3555432 2467889987 5665433
No 284
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=84.34 E-value=1.1 Score=41.85 Aligned_cols=43 Identities=7% Similarity=-0.010 Sum_probs=34.0
Q ss_pred EEEEEEEE-cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 485 FTERKWAS-ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 485 ~~e~v~~~-S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..+++.+. ..+|.++++.|+.|++. . +++.|+||+.||+.+..
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~-~-~~~~p~vv~lHG~~~~~ 57 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKA-I-HEPCPVVWYLSGLTCTH 57 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGG-G-TSCEEEEEEECCTTCCS
T ss_pred cEEEEEEeccccCCcceEEEEcCCCC-C-CCCCCEEEEEcCCCCCc
Confidence 44555554 46899999999999976 4 67899999999987654
No 285
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=84.31 E-value=26 Score=35.68 Aligned_cols=106 Identities=9% Similarity=0.070 Sum_probs=55.9
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccCCc---------cceeEEccC---C-eEEEEEEC--C
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---------TASVEWAGN---E-ALVYITMD--E 256 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~~~---------~~~~~Ws~D---g-~l~Y~~~d--~ 256 (534)
...+.+.|||++++ + +..|. .|++++..+|+.... .++.. .-+++|.|| + .||++... .
T Consensus 29 P~~~a~~pdG~l~V-~-e~~gg---~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 29 PHALLWGPDNQIWL-T-ERATG---KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp EEEEEECTTSCEEE-E-ETTTC---EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred ceEEEEcCCCcEEE-E-EcCCC---EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 44678999998443 3 34442 477777666654211 12221 126999996 4 44443321 1
Q ss_pred --CCC----CceEEEeecCCCC---CCceEeeee-cC--CceEEEEEEcCCCcEEEEEec
Q 009441 257 --ILR----PDKAWLHKLEADQ---SNDICLYHE-KD--DIYSLGLQASESKKFLFIASE 304 (534)
Q Consensus 257 --~~r----~~~v~~~~lgt~~---~~d~lv~~e-~d--~~~~v~~~~S~Dg~~l~i~~~ 304 (534)
... ..+|+++++.... ...+.|+.. +. ..+--.+.+.+||+ |+|+..
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 011 3578888764321 122345532 11 12334588999996 666654
No 286
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=84.26 E-value=1.3 Score=47.53 Aligned_cols=39 Identities=23% Similarity=0.402 Sum_probs=33.4
Q ss_pred CCCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEc
Q 009441 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGY 523 (534)
Q Consensus 481 ~~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gY 523 (534)
...|..+.++++++||++|.++|+.|++. ++.|+||+.|
T Consensus 20 ~~~~~~~~v~i~~~DG~~L~~~~~~P~~~----~~~P~vl~~h 58 (615)
T 1mpx_A 20 SNDYIKREVMIPMRDGVKLHTVIVLPKGA----KNAPIVLTRT 58 (615)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEE
T ss_pred cCCCEEEEEEEECCCCCEEEEEEEeCCCC----CCeeEEEEEc
Confidence 44678899999999999999999999864 4789999866
No 287
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=84.19 E-value=35 Score=33.82 Aligned_cols=185 Identities=10% Similarity=0.103 Sum_probs=96.8
Q ss_pred EECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC---ccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCC
Q 009441 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (534)
Q Consensus 197 ~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~---~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~ 273 (534)
.+++||++||.+... | .|+|+|+.+++.+.. +.+ ....+.| |+.++++...+ ..|..+++.++.
T Consensus 138 ~~~~d~~~l~~g~~d-g----~i~iwd~~~~~~~~~-~~~h~~~v~~l~~--~~~~l~sg~~d----g~i~vwd~~~~~- 204 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-N----TIKIWDKNTLECKRI-LTGHTGSVLCLQY--DERVIITGSSD----STVRVWDVNTGE- 204 (435)
T ss_dssp EEECCSSEEEEEESS-S----CEEEEESSSCCEEEE-ECCCSSCEEEEEC--CSSEEEEEETT----SCEEEEESSSCC-
T ss_pred EEEECCCEEEEEeCC-C----eEEEEeCCCCeEEEE-EcCCCCcEEEEEE--CCCEEEEEcCC----CeEEEEECCCCc-
Confidence 456699999987553 3 699999999987542 221 2234666 66565665432 357777776652
Q ss_pred CceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCce--eEeeecccceeEEEeeeCCEEEEEEcCCC
Q 009441 274 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL--RVLTPRVVGVDTAASHRGNHFFITRRSDE 351 (534)
Q Consensus 274 ~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~--~~l~~~~~g~~~~v~~~g~~lyi~tn~~~ 351 (534)
....+... ......+.++ +.+++..+. ...|.+.++.++... ........+....+..+++.++..+.
T Consensus 205 -~~~~~~~h-~~~v~~l~~~--~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~--- 274 (435)
T 1p22_A 205 -MLNTLIHH-CEAVLHLRFN--NGMMVTCSK---DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG--- 274 (435)
T ss_dssp -EEEEECCC-CSCEEEEECC--TTEEEEEET---TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEET---
T ss_pred -EEEEEcCC-CCcEEEEEEc--CCEEEEeeC---CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeC---
Confidence 12223221 2223334443 445544332 234666677664411 12222222223334556776655443
Q ss_pred CCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCC
Q 009441 352 LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (534)
Q Consensus 352 ~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~ 412 (534)
++.|...++.+.... ..+..... .+..+.+.++.| +....+| .|.++++.+ |+
T Consensus 275 --dg~i~vwd~~~~~~~-~~~~~~~~-~v~~~~~~~~~l-~~g~~dg--~i~iwd~~~-~~ 327 (435)
T 1p22_A 275 --DRTIKVWNTSTCEFV-RTLNGHKR-GIACLQYRDRLV-VSGSSDN--TIRLWDIEC-GA 327 (435)
T ss_dssp --TSEEEEEETTTCCEE-EEEECCSS-CEEEEEEETTEE-EEEETTS--CEEEEETTT-CC
T ss_pred --CCeEEEEECCcCcEE-EEEcCCCC-cEEEEEeCCCEE-EEEeCCC--eEEEEECCC-CC
Confidence 245667777654321 12332222 366676655544 4455556 477778875 54
No 288
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=84.11 E-value=1.3 Score=47.97 Aligned_cols=37 Identities=27% Similarity=0.411 Sum_probs=32.1
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEc
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGY 523 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gY 523 (534)
.|..+.++++++||++|.++|+.|++. ++.|+||..|
T Consensus 34 ~~~~~~v~i~~~DG~~L~~~l~~P~~~----~~~PvIl~~h 70 (652)
T 2b9v_A 34 DYIKREVMVPMRDGVKLYTVIVIPKNA----RNAPILLTRT 70 (652)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTC----CSEEEEEEEE
T ss_pred CcEEEEEEEECCCCcEEEEEEEecCCC----CCccEEEEEC
Confidence 577899999999999999999999864 5789999775
No 289
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=83.54 E-value=1.7 Score=42.96 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=34.9
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..+..+.+.+++.||..|.+.|+.|++. . ++.|+||+.|||-
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~v~~p~~~-~--~~~p~vv~iHGgg 119 (361)
T 1jkm_A 78 DDVETSTETILGVDGNEITLHVFRPAGV-E--GVLPGLVYTHGGG 119 (361)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEETTC-C--SCEEEEEEECCST
T ss_pred CCceeeeeeeecCCCCeEEEEEEeCCCC-C--CCCeEEEEEcCCc
Confidence 3466788889999999999999999865 2 3789999999975
No 290
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=82.73 E-value=1.5 Score=41.03 Aligned_cols=43 Identities=9% Similarity=0.036 Sum_probs=33.0
Q ss_pred EEEEEEEE-cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 485 FTERKWAS-ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 485 ~~e~v~~~-S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..+.+.+. +.+|..+++.|+.|++. . +++.|+||+.||+.+..
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~p~vv~lHG~~~~~ 58 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKA-E-TGKCPALYWLSGLTCTE 58 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGG-G-TSCEEEEEEECCTTCCS
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCC-C-CCCCCEEEEEcCCCCCc
Confidence 34444444 45899999999999975 3 46899999999987753
No 291
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.17 E-value=22 Score=34.73 Aligned_cols=119 Identities=13% Similarity=0.016 Sum_probs=62.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeec--cccC-----C--ccceeEEccC---C-eEEEEEECC--C
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPLV-----G--VTASVEWAGN---E-ALVYITMDE--I 257 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~--~~i~-----~--~~~~~~Ws~D---g-~l~Y~~~d~--~ 257 (534)
...+.+.|||++|.+ .+..| .|++++.+ |+... ..++ + ...+++++|| + .||.+.... .
T Consensus 20 P~~i~~~pdG~~l~V-~e~~G----~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 20 PWALAFLPDNHGMLI-TLRGG----ELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp EEEEEECSTTCCEEE-EETTT----EEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred cEEEEEcCCCCEEEE-EeCCc----eEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 456789999996333 34444 57888854 33211 0111 1 1235899996 4 444432211 1
Q ss_pred C-CCceEEEeecCCCC---CCceEeeeecC----C-ceEEEEEEcCCCcEEEEEecCcc-----------eeEEEEEeCC
Q 009441 258 L-RPDKAWLHKLEADQ---SNDICLYHEKD----D-IYSLGLQASESKKFLFIASESKI-----------TRFVFYLDVS 317 (534)
Q Consensus 258 ~-r~~~v~~~~lgt~~---~~d~lv~~e~d----~-~~~v~~~~S~Dg~~l~i~~~~~~-----------~~ev~~~d~~ 317 (534)
. ...+|+++++.... ...+.++.... . .+--.+.+.+|| +|++...+.. ...|+.++.+
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 1 13478888764321 11233443211 1 112247889999 6777764422 2368888876
Q ss_pred C
Q 009441 318 K 318 (534)
Q Consensus 318 ~ 318 (534)
+
T Consensus 173 G 173 (353)
T 2g8s_A 173 G 173 (353)
T ss_dssp S
T ss_pred C
Confidence 4
No 292
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=81.30 E-value=1.7 Score=43.47 Aligned_cols=46 Identities=15% Similarity=0.110 Sum_probs=36.7
Q ss_pred CcEEEEEEEEcCC--C--ceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 483 NYFTERKWASASD--G--TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 483 ~~~~e~v~~~S~D--G--~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
.....++.|.+.| | +.|.++|+.|++. ...++.|+||+.||+.+..
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~-~~~~~~P~vv~~HG~~~~~ 92 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGE-RCSGPYPLLGWGHPTEALR 92 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECT-TCCSCEEEEEEECCCCCBT
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCC-CCCCCCcEEEEeCCCcCCC
Confidence 3456788888776 5 4688999999986 5678899999999988754
No 293
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=80.84 E-value=34 Score=31.34 Aligned_cols=189 Identities=11% Similarity=0.091 Sum_probs=97.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeec
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~l 268 (534)
.+..+.+++||+..+ + +..+ ..|+++|.+ |+.....++ .....++..++|.+|++... ...|++++.
T Consensus 63 ~~~~i~~~~~g~l~v-~-~~~~---~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~~~ 132 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWF-T-ENGA---NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN----GDRIGKLTA 132 (300)
T ss_dssp CEEEEEECTTSCEEE-E-ETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT----TTEEEEECT
T ss_pred cceeEEECCCCCEEE-E-ecCC---CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC----CCeEEEECC
Confidence 466778899998433 3 3222 257888887 665432222 12345778888877766421 246777765
Q ss_pred CCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEee-ecccceeEE--EeeeCCEEE
Q 009441 269 EADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDTA--ASHRGNHFF 344 (534)
Q Consensus 269 gt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~-~~~~g~~~~--v~~~g~~ly 344 (534)
. + ....+.-. ....-..+..+++|+ |.+... ....|+.++. ++. +..+. +........ +++ .+.+|
T Consensus 133 ~-g---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~-~g~l~ 202 (300)
T 2qc5_A 133 D-G---TIYEYDLPNKGSYPAFITLGSDNA-LWFTEN--QNNSIGRITN-TGK-LEEYPLPTNAAAPVGITSGN-DGALW 202 (300)
T ss_dssp T-S---CEEEEECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECT-TSSEE
T ss_pred C-C---CEEEccCCCCCCCceeEEECCCCC-EEEEec--CCCeEEEECC-CCc-EEEeeCCCCCCCcceEEECC-CCCEE
Confidence 4 2 12222211 112233567889998 444332 2346888887 333 33221 111111122 333 45687
Q ss_pred EEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECC
Q 009441 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 345 i~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 408 (534)
+.+.. +.+|.+++.. .....+.++.. ...+.++.+.+ +.|++....+ ..|.+++.+
T Consensus 203 v~~~~----~~~i~~~~~~-g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~--~~i~~~~~~ 259 (300)
T 2qc5_A 203 FVEIM----GNKIGRITTT-GEISEYDIPTP-NARPHAITAGKNSEIWFTEWGA--NQIGRITND 259 (300)
T ss_dssp EEETT----TTEEEEECTT-CCEEEEECSST-TCCEEEEEECSTTCEEEEETTT--TEEEEECTT
T ss_pred EEccC----CCEEEEEcCC-CcEEEEECCCC-CCCceEEEECCCCCEEEeccCC--CeEEEECCC
Confidence 76653 2468888762 22112223322 22466777664 4677666433 357777764
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=80.61 E-value=18 Score=37.43 Aligned_cols=122 Identities=14% Similarity=0.172 Sum_probs=70.0
Q ss_pred cEEEEEEEE-------CCCCCEEEEEEcCCCC--eEEEEEEEECCC-CCeec----cccCC--ccceeEEccCC-eEEEE
Q 009441 190 FYSVGCFQV-------SPDNKLVAYAEDTKGD--EIYTVYVIDIET-GTPVG----KPLVG--VTASVEWAGNE-ALVYI 252 (534)
Q Consensus 190 ~~~l~~~~~-------SPDG~~LA~~~d~~G~--E~~~l~v~dl~t-g~~~~----~~i~~--~~~~~~Ws~Dg-~l~Y~ 252 (534)
+-....+.+ +++|++|.++-+.+|+ ....+++++.+. |+... ..+.. ...+++-.|++ .|||+
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFN 264 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEE
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEE
Confidence 335777889 9999987766665543 556677777555 44321 11211 12346778866 77776
Q ss_pred EECCCCCCceEEEeecC-------CCCC------C----ceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEe
Q 009441 253 TMDEILRPDKAWLHKLE-------ADQS------N----DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD 315 (534)
Q Consensus 253 ~~d~~~r~~~v~~~~lg-------t~~~------~----d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d 315 (534)
.. ...+|+++++. ++.. . -..++...+..+-..++++++|++|+|.- ..+..|+.++
T Consensus 265 d~----~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD--~~~h~I~kid 338 (496)
T 3kya_A 265 SY----EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV--INNHYFMRSD 338 (496)
T ss_dssp ET----TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE--TTTTEEEEEE
T ss_pred EC----CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe--CCCCEEEEEe
Confidence 53 23479999886 4421 0 01234332223333578899999876643 2234566655
Q ss_pred CC
Q 009441 316 VS 317 (534)
Q Consensus 316 ~~ 317 (534)
.+
T Consensus 339 ~d 340 (496)
T 3kya_A 339 YD 340 (496)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=80.50 E-value=10 Score=38.37 Aligned_cols=117 Identities=8% Similarity=0.025 Sum_probs=63.3
Q ss_pred EEEEEEECCCCCEEEEEEcCCC-CeEEEEEEEECCCCCeeccccC--CccceeEEcc-CCeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPLV--GVTASVEWAG-NEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G-~E~~~l~v~dl~tg~~~~~~i~--~~~~~~~Ws~-Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
....+.+++||+ +|..+..+ .....+..++..++......+. +...++++.+ +|.||++.. ...+|++++
T Consensus 183 ~P~giavd~dG~--lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~----~~~~V~~~d 256 (433)
T 4hw6_A 183 QCADVNFTLNGD--MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRY----HHAMISSYD 256 (433)
T ss_dssp CEEEEEECTTCC--EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBT----TCSEEEEEC
T ss_pred CccEEEECCCCC--EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEEC----CCCEEEEEE
Confidence 466789999999 55555533 2223344444433321101111 1234588888 446666532 235799888
Q ss_pred cCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC
Q 009441 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (534)
Q Consensus 268 lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~ 317 (534)
..++.. -..++......+...+++++||++|++... .+..|+.++.+
T Consensus 257 ~~~g~~-~~~~~~~~~~~~~~~ia~dpdG~~LYvad~--~~~~I~~~~~d 303 (433)
T 4hw6_A 257 PATGTL-TEEEVMMDTKGSNFHIVWHPTGDWAYIIYN--GKHCIYRVDYN 303 (433)
T ss_dssp TTTCCE-EEEEEECSCCSSCEEEEECTTSSEEEEEET--TTTEEEEEEBC
T ss_pred CCCCeE-EEEEeccCCCCCcccEEEeCCCCEEEEEeC--CCCEEEEEeCC
Confidence 764421 023333222222235789999998877543 23467777765
No 296
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=78.72 E-value=1.7 Score=41.26 Aligned_cols=42 Identities=12% Similarity=0.082 Sum_probs=33.8
Q ss_pred cEEEEEEEEcCC-CceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 484 YFTERKWASASD-GTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 484 ~~~e~v~~~S~D-G~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..++.+.+.|.+ |.+++++|+.|++. ..++++|+|...+|+.
T Consensus 11 ~~~~~~~~~S~~~~~~~~~~vylP~~y-~~~~~yPvly~l~G~~ 53 (278)
T 2gzs_A 11 YHFSATSFDSVDGTRHYRVWTAVPNTT-APASGYPILYMLDGNA 53 (278)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEESSC-CCTTCEEEEEESSHHH
T ss_pred CceEEEEEEcCCCCceEEEEEECCCCC-CCCCCCCEEEEeeChh
Confidence 457888899987 79999999999998 6678899875555543
No 297
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=78.60 E-value=2.8 Score=41.53 Aligned_cols=43 Identities=12% Similarity=0.077 Sum_probs=29.9
Q ss_pred CCcEEEEEEEEcCCCceecEEEEE-eCCC-------------------CCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVY-RKNL-------------------VKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~-~k~~-------------------~~~~~~~P~lL~gYGgy 526 (534)
..+.++.+.+.+.|| +.+.|+. |++. ...+++.|+|||.|||-
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg 122 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGS 122 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCST
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCc
Confidence 356789999999999 5555555 6542 01346789999999984
No 298
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=78.20 E-value=56 Score=32.30 Aligned_cols=184 Identities=14% Similarity=0.063 Sum_probs=95.4
Q ss_pred CCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceE
Q 009441 201 DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (534)
Q Consensus 201 DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~l 277 (534)
||++|+.+.. +| .|+++|+.+++.+.. +. +....+.| |+..+++...+ ..|..+++.++. ...
T Consensus 248 ~~~~l~~~~~-dg----~i~iwd~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~d----~~i~i~d~~~~~--~~~ 313 (445)
T 2ovr_B 248 DGRRVVSGAY-DF----MVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLD----TSIRVWDVETGN--CIH 313 (445)
T ss_dssp CSSCEEEEET-TS----CEEEEEGGGTEEEEE-ECCCSSCEEEEEE--CSSEEEEEETT----SCEEEEETTTCC--EEE
T ss_pred CCCEEEEEcC-CC----EEEEEECCCCcEeEE-ecCCCCceEEEEE--CCCEEEEEeCC----CeEEEEECCCCC--EEE
Confidence 7777776544 23 689999998876542 22 22334677 66445554322 357777876652 122
Q ss_pred eeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec--ccceeEEEeeeCCEEEEEEcCCCCCcc
Q 009441 278 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR--VVGVDTAASHRGNHFFITRRSDELFNS 355 (534)
Q Consensus 278 v~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~--~~g~~~~v~~~g~~lyi~tn~~~~~~~ 355 (534)
.+.... .... .++.++++++....+ ..|.+.++.++.....+... ..+....+..+++.++..+. ++
T Consensus 314 ~~~~~~-~~v~--~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~-----dg 382 (445)
T 2ovr_B 314 TLTGHQ-SLTS--GMELKDNILVSGNAD---STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD-----DG 382 (445)
T ss_dssp EECCCC-SCEE--EEEEETTEEEEEETT---SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEET-----TS
T ss_pred EEcCCc-ccEE--EEEEeCCEEEEEeCC---CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeC-----CC
Confidence 232211 2222 233467776654432 35677787665422222211 11222334445555444332 24
Q ss_pred EEEEEeCCCCCCceEEec---CCCCceeeeEEEeCCEE-EEEEeeCCe--eEEEEEECCC
Q 009441 356 ELLACPVDNTSETTVLIP---HRESVKLQDIQLFIDHL-AVYEREGGL--QKITTYRLPA 409 (534)
Q Consensus 356 ~L~~~~~~~~~~~~~li~---~~~~~~l~~~~~~~~~l-v~~~~~~g~--~~l~~~~l~~ 409 (534)
.|...++.+.....-+.. ......+..+.+.++.. ++....+|. ..|.+++++.
T Consensus 383 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 383 TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 666677765432111211 11233577888877654 455666674 5788888873
No 299
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=75.26 E-value=3.7 Score=41.45 Aligned_cols=41 Identities=12% Similarity=0.227 Sum_probs=33.7
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
...++++.++. ||..|++++..|++ +++.|+||+.||.-|.
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~----~~~~P~vv~~hG~~~~ 205 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNT----DKPHPVVIVSAGLDSL 205 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCS----SSCEEEEEEECCTTSC
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCC----CCCCCEEEEECCCCcc
Confidence 45678888887 99999999998875 3578999999997654
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=74.97 E-value=56 Score=30.66 Aligned_cols=254 Identities=9% Similarity=-0.056 Sum_probs=119.2
Q ss_pred ECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc--CCccceeEEccCCeEEEEE-E----CCCCCCceEEEeecC
Q 009441 198 VSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL--VGVTASVEWAGNEALVYIT-M----DEILRPDKAWLHKLE 269 (534)
Q Consensus 198 ~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i--~~~~~~~~Ws~Dg~l~Y~~-~----d~~~r~~~v~~~~lg 269 (534)
..-+++.++|+=. ++.....++++|+.+++.... .+ +.....++- -++.+|... . +.......++++++.
T Consensus 21 ~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 21 PKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred cCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 3445555555422 223334688888888764332 12 222222332 245555542 1 111122467888776
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEe--cCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEE
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIAS--ESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFIT 346 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~--~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~ 346 (534)
+..-. .+-.-+.+........ -+++..++.- .....+++++.|..+.. |..+.+...... ......++.+|+.
T Consensus 99 ~~~W~--~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~ 174 (308)
T 1zgk_A 99 TNQWS--PCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE-WHLVAPMLTRRIGVGVAVLNRLLYAV 174 (308)
T ss_dssp TTEEE--ECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred CCeEe--ECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe-EeECCCCCccccceEEEEECCEEEEE
Confidence 54211 1101111222222222 2555444422 12224678999987764 655533221111 1122347899998
Q ss_pred EcCCC-CCccEEEEEeCCCCCCceE-EecCCCC-ceeeeEEEeCCEEEEEEeeCC---eeEEEEEECCCCCCcccccCCC
Q 009441 347 RRSDE-LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQLFIDHLAVYEREGG---LQKITTYRLPAVGEPLKSLQGG 420 (534)
Q Consensus 347 tn~~~-~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~~g~~~~~~~~~ 420 (534)
....+ .....+...++.+ ..| .++.-+. ..-..+...++.|++..-.++ ...++++++.+ +.+.
T Consensus 175 GG~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~------ 244 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPER---NEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET-ETWT------ 244 (308)
T ss_dssp CCBCSSCBCCCEEEEETTT---TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT-TEEE------
T ss_pred eCCCCCCcCceEEEEeCCC---CeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCC-CcEE------
Confidence 65421 1235677787654 467 3332221 122344556888888764433 35688999875 3321
Q ss_pred cee-eecCceeeEeCCCCccCccEEEEEeccC---CCCCeEEEEECCCCcEEEEEE
Q 009441 421 KSV-EFIDPVYSIDPSESVFSSRILRFHYSSL---RTPPSVYDYDMDMGISVLKKI 472 (534)
Q Consensus 421 ~~i-~lp~~~~~i~~~~~~~~~~~l~~~~sS~---~~P~~~y~~d~~~~~~~~~~~ 472 (534)
.+ .+|..-...... .. ++.+++ +.+. ..-..++.||+++++++.+..
T Consensus 245 -~~~~~p~~r~~~~~~--~~-~~~i~v-~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 245 -FVAPMKHRRSALGIT--VH-QGRIYV-LGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp -ECCCCSSCCBSCEEE--EE-TTEEEE-ECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred -ECCCCCCCccceEEE--EE-CCEEEE-EcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 11 122211000000 01 223333 2222 224578999999999887654
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=74.46 E-value=77 Score=32.07 Aligned_cols=161 Identities=10% Similarity=0.086 Sum_probs=82.9
Q ss_pred ceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEeeee-----cCCceEEEEEEcCC---CcEEEEEecC-----
Q 009441 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE-----KDDIYSLGLQASES---KKFLFIASES----- 305 (534)
Q Consensus 239 ~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e-----~d~~~~v~~~~S~D---g~~l~i~~~~----- 305 (534)
.+++|.|||.+|.+... ..+|++.+..++..+....+.+ ....-.++++++|| +++|++....
T Consensus 30 ~~~a~~pdG~l~V~e~~----gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 30 HALLWGPDNQIWLTERA----TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp EEEEECTTSCEEEEETT----TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred eEEEEcCCCcEEEEEcC----CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 35899999988777521 2368887754332111111111 01223457889997 7787776532
Q ss_pred -----cceeEEEEEeCCCCC----ceeEeee---cccc---eeEEEeeeCCEEEEEEcCCC-------------------
Q 009441 306 -----KITRFVFYLDVSKPE----ELRVLTP---RVVG---VDTAASHRGNHFFITRRSDE------------------- 351 (534)
Q Consensus 306 -----~~~~ev~~~d~~~~~----~~~~l~~---~~~g---~~~~v~~~g~~lyi~tn~~~------------------- 351 (534)
...+.|+.++.+... ..+.+.. .... ....++++| .||+.+...+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~ 184 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIGDQGRNQLAYLFLPNQAQHTPTQ 184 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEECCTTTTSGGGTTSCCCTTCCCCH
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEECCCCCCCcccccccccccccccc
Confidence 114577777764321 2233332 1111 112255554 6888765311
Q ss_pred ---------CCccEEEEEeCCCCCC-c-------eE-EecCCCCceeeeEEEeC-CEEEEEEee-CCeeEEEEE
Q 009441 352 ---------LFNSELLACPVDNTSE-T-------TV-LIPHRESVKLQDIQLFI-DHLAVYERE-GGLQKITTY 405 (534)
Q Consensus 352 ---------~~~~~L~~~~~~~~~~-~-------~~-li~~~~~~~l~~~~~~~-~~lv~~~~~-~g~~~l~~~ 405 (534)
...++|++++.+..-. . .. ++... .....++.+.. +.|++.... ++-.+|.++
T Consensus 185 ~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G-~RNp~gla~dp~G~L~~~d~g~~~~dein~i 257 (454)
T 1cru_A 185 QELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG-HRNPQGLAFTPNGKLLQSEQGPNSDDEINLI 257 (454)
T ss_dssp HHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC-CSEEEEEEECTTSCEEEEEECSSSCEEEEEC
T ss_pred ccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC-CCCcceEEECCCCCEEEEecCCCCCeEEEEe
Confidence 1258999998753200 0 11 33332 23567777764 467766542 334455554
No 302
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=74.36 E-value=70 Score=31.52 Aligned_cols=185 Identities=14% Similarity=0.145 Sum_probs=94.8
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC---CccceeEEccCCeEEEEEECCCCCCceEEEeecC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~---~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
|..+.+ ||++|+.+.. +| +|+|+|+.+|+.+.. +. .....+.|++ .++++...+ ..|..+++.
T Consensus 176 v~~l~~--~~~~l~sg~~-dg----~i~vwd~~~~~~~~~-~~~h~~~v~~l~~~~--~~l~s~s~d----g~i~vwd~~ 241 (435)
T 1p22_A 176 VLCLQY--DERVIITGSS-DS----TVRVWDVNTGEMLNT-LIHHCEAVLHLRFNN--GMMVTCSKD----RSIAVWDMA 241 (435)
T ss_dssp EEEEEC--CSSEEEEEET-TS----CEEEEESSSCCEEEE-ECCCCSCEEEEECCT--TEEEEEETT----SCEEEEECS
T ss_pred EEEEEE--CCCEEEEEcC-CC----eEEEEECCCCcEEEE-EcCCCCcEEEEEEcC--CEEEEeeCC----CcEEEEeCC
Confidence 444444 8888887654 33 699999999987642 22 1223477753 244444322 356777776
Q ss_pred CCCCCce-EeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEc
Q 009441 270 ADQSNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRR 348 (534)
Q Consensus 270 t~~~~d~-lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn 348 (534)
++..... ..+.. .......+.+ ++++++..+.+ ..|.+.++.++.....+... .+....+..+++.++..+.
T Consensus 242 ~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~g~~ 314 (435)
T 1p22_A 242 SPTDITLRRVLVG-HRAAVNVVDF--DDKYIVSASGD---RTIKVWNTSTCEFVRTLNGH-KRGIACLQYRDRLVVSGSS 314 (435)
T ss_dssp SSSCCEEEEEECC-CSSCEEEEEE--ETTEEEEEETT---SEEEEEETTTCCEEEEEECC-SSCEEEEEEETTEEEEEET
T ss_pred CCCCceeeeEecC-CCCcEEEEEe--CCCEEEEEeCC---CeEEEEECCcCcEEEEEcCC-CCcEEEEEeCCCEEEEEeC
Confidence 5532110 12221 1122223333 78887665432 45777888775422222222 2223334455665554443
Q ss_pred CCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECC
Q 009441 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 408 (534)
. +.|...++.+.... ..+..... .+..+.+.++ .++....+|. |.++++.
T Consensus 315 d-----g~i~iwd~~~~~~~-~~~~~h~~-~v~~~~~~~~-~l~sg~~dg~--i~vwd~~ 364 (435)
T 1p22_A 315 D-----NTIRLWDIECGACL-RVLEGHEE-LVRCIRFDNK-RIVSGAYDGK--IKVWDLV 364 (435)
T ss_dssp T-----SCEEEEETTTCCEE-EEECCCSS-CEEEEECCSS-EEEEEETTSC--EEEEEHH
T ss_pred C-----CeEEEEECCCCCEE-EEEeCCcC-cEEEEEecCC-EEEEEeCCCc--EEEEECC
Confidence 2 35666676543211 13332222 4666766444 4555556664 6666765
No 303
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=74.06 E-value=4.3 Score=39.63 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=30.6
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCC--------------CCCCCcEEEEEcCCC
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVK--------------LDGSDPLLLYGYGSY 526 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~--------------~~~~~P~lL~gYGgy 526 (534)
.+.++.+.+.+ |..|++.|+.|++. . .+++.|+||+.|||-
T Consensus 69 ~v~~~dv~~~~--~~~l~~~~~~P~~~-~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg 123 (351)
T 2zsh_A 69 GVFSFDVLIDR--RINLLSRVYRPAYA-DQEQPPSILDLEKPVDGDIVPVILFFHGGS 123 (351)
T ss_dssp TEEEEEEEEET--TTTEEEEEEEECCT-TCSSCCCTTSTTCCCCSSSCEEEEEECCST
T ss_pred CceEEEEEecC--CCCeEEEEEecCCc-cccccccccccccccCCCCceEEEEECCCc
Confidence 34566676654 77789999999864 3 246889999999964
No 304
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=74.03 E-value=61 Score=30.68 Aligned_cols=200 Identities=11% Similarity=0.056 Sum_probs=98.4
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC-eecccc---------CC---ccceeEEcc-CCeEEEEEECCC
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-PVGKPL---------VG---VTASVEWAG-NEALVYITMDEI 257 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~-~~~~~i---------~~---~~~~~~Ws~-Dg~l~Y~~~d~~ 257 (534)
....+.++|||+ .|..+... ..|+++|.++.. .+. .+ .+ ...++++++ +|.+|.+-.
T Consensus 92 ~p~gia~d~~g~--l~v~d~~~---~~v~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~--- 162 (329)
T 3fvz_A 92 LPHGLSIDTDGN--YWVTDVAL---HQVFKLDPHSKEGPLL-ILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG--- 162 (329)
T ss_dssp SEEEEEECTTSC--EEEEETTT---TEEEEECTTCSSCCSE-EESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC---
T ss_pred CceEEEECCCCC--EEEEECCC---CEEEEEeCCCCeEEEE-EecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC---
Confidence 466789999999 34445432 268899986552 221 11 11 124589998 556666541
Q ss_pred CCCceEEEeecCCCCCCceEeeeecC-------Cce--EEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeec
Q 009441 258 LRPDKAWLHKLEADQSNDICLYHEKD-------DIY--SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR 328 (534)
Q Consensus 258 ~r~~~v~~~~lgt~~~~d~lv~~e~d-------~~~--~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~ 328 (534)
....+|++++.. + .-...+.... ..+ -.++++++|+..|++... .+..|.+++.++++....+...
T Consensus 163 ~~~~~I~~~~~~-g--~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 163 YCNSRIVQFSPS-G--KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp SSCCEEEEECTT-S--CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCT
T ss_pred CCCCeEEEEcCC-C--CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEecc
Confidence 113467777632 1 1122232111 111 235788999666666432 2457888888754412222111
Q ss_pred ccc-eeEEEeeeCCEEEEEEcCC---CCCccEEEEEeCCCCCCceEEec--CCCCceeeeEEEeCC-EEEEEEeeCCeeE
Q 009441 329 VVG-VDTAASHRGNHFFITRRSD---ELFNSELLACPVDNTSETTVLIP--HRESVKLQDIQLFID-HLAVYEREGGLQK 401 (534)
Q Consensus 329 ~~g-~~~~v~~~g~~lyi~tn~~---~~~~~~L~~~~~~~~~~~~~li~--~~~~~~l~~~~~~~~-~lv~~~~~~g~~~ 401 (534)
..+ ..+.+....+.++...... +..+.++..+++.+..... .+. ........++.+.++ .||+....++ +
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~-~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~--~ 314 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID-VFKPVRKHFDMPHDIVASEDGTVYIGDAHTN--T 314 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE-EECCSSSCCSSEEEEEECTTSEEEEEESSSC--C
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE-EEcCCCCccCCeeEEEECCCCCEEEEECCCC--E
Confidence 111 1222221124444332210 1234467777765433211 232 111223667777654 6666665444 6
Q ss_pred EEEEECC
Q 009441 402 ITTYRLP 408 (534)
Q Consensus 402 l~~~~l~ 408 (534)
|++++++
T Consensus 315 I~~~~~~ 321 (329)
T 3fvz_A 315 VWKFTLT 321 (329)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 7777765
No 305
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=73.99 E-value=2.8 Score=40.22 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=28.9
Q ss_pred EEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 485 ~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
.++.+.+++.|| .|++.++ +. .++.|+||+.|||-
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~-----~~~~p~vv~~HGgg 89 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ-----KPDSPVLVYYHGGG 89 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES-----SSSEEEEEEECCST
T ss_pred eEEEEEecCCCC-cEEEEEE-cC-----CCCceEEEEECCcc
Confidence 578899999999 8999987 32 24679999999985
No 306
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=73.29 E-value=3.9 Score=39.59 Aligned_cols=46 Identities=17% Similarity=0.109 Sum_probs=34.5
Q ss_pred CcEEEEEEEEcCCCceecEEEEEeCCCCC--CCCCCcEEEEEcCCCCcC
Q 009441 483 NYFTERKWASASDGTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 483 ~~~~e~v~~~S~DG~~VP~~lv~~k~~~~--~~~~~P~lL~gYGgyg~~ 529 (534)
.|..+.+.+++.||.++.++.+.+.+. . ..++.|+||+.||..+.+
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~-~~~~~~~~~~vvl~HG~~~~~ 71 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRK-NSENIGRRPVAFLQHGLLASA 71 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSS-CCTTTTTCCEEEEECCTTCCG
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCC-CccccCCCCeEEEECCCCCch
Confidence 456688889999999999988765432 1 124689999999987754
No 307
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=73.02 E-value=32 Score=33.70 Aligned_cols=119 Identities=10% Similarity=0.125 Sum_probs=63.0
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC-------CccceeEEccC---CeEEEEEECCCCCCc
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-------GVTASVEWAGN---EALVYITMDEILRPD 261 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~-------~~~~~~~Ws~D---g~l~Y~~~d~~~r~~ 261 (534)
-..+.+.|||+. .++....| .|++++.++|+.... .++ +...+++++|| ++.+|+.+... ...
T Consensus 34 P~~ia~~pdG~l-lVter~~G----~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~ 107 (347)
T 3das_A 34 PWGLAPLPGGDL-LVSSRDEA----TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDN 107 (347)
T ss_dssp EEEEEECTTSCE-EEEETTTC----EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSE
T ss_pred ceEEEEcCCCcE-EEEEecCC----EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-CCC
Confidence 456789999983 33333244 577777766654221 121 11235899986 23334332111 235
Q ss_pred eEEEeecCCC------CCCceEeeee-cC-Cc-eEEEEEEcCCCcEEEEEecCc-----------ceeEEEEEeCCC
Q 009441 262 KAWLHKLEAD------QSNDICLYHE-KD-DI-YSLGLQASESKKFLFIASESK-----------ITRFVFYLDVSK 318 (534)
Q Consensus 262 ~v~~~~lgt~------~~~d~lv~~e-~d-~~-~~v~~~~S~Dg~~l~i~~~~~-----------~~~ev~~~d~~~ 318 (534)
+|.++++... ..+.+.|+.. +. .. +--.+.+.+||+ |+|+..+. ....|+.++.++
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 7888887542 1123455542 11 11 222478899994 67765431 124567776654
No 308
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=71.16 E-value=81 Score=30.87 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=22.8
Q ss_pred ceEEEeecCCCCCCceEeeeecC--CceEEEEEEcCCCcEEEEEe
Q 009441 261 DKAWLHKLEADQSNDICLYHEKD--DIYSLGLQASESKKFLFIAS 303 (534)
Q Consensus 261 ~~v~~~~lgt~~~~d~lv~~e~d--~~~~v~~~~S~Dg~~l~i~~ 303 (534)
..|..+++.+++ -...+...+ ......+++||||++++..+
T Consensus 203 ~TIkIWDl~TGk--~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 203 NNIVIWNLKTGQ--LLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp SEEEEEETTTCC--EEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred CcEEEEECCCCc--EEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 467777887763 222333211 11222457899999886544
No 309
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=70.78 E-value=77 Score=30.45 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=69.5
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCcccccC
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ 418 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~~~~ 418 (534)
.++.+|+.+. ++.|+.++..+.. ..|-.+.. ....+.+.++.|++....+ .|+.++..+ |+.+
T Consensus 238 ~~~~v~~~~~-----~g~l~~~d~~tG~-~~w~~~~~---~~~~~~~~~~~l~~~~~~g---~l~~~d~~t-G~~~---- 300 (376)
T 3q7m_A 238 VNGVVFALAY-----NGNLTALDLRSGQ-IMWKRELG---SVNDFIVDGNRIYLVDQND---RVMALTIDG-GVTL---- 300 (376)
T ss_dssp ETTEEEEECT-----TSCEEEEETTTCC-EEEEECCC---CEEEEEEETTEEEEEETTC---CEEEEETTT-CCEE----
T ss_pred ECCEEEEEec-----CcEEEEEECCCCc-EEeeccCC---CCCCceEECCEEEEEcCCC---eEEEEECCC-CcEE----
Confidence 4678887653 2468888886643 35743322 2445666788888776533 478888875 6632
Q ss_pred CCceeeecCc-eeeEeCCCCccCccEEEEEeccCCCCCeEEEEECCCCcEEEEEEccccCCCCCCCc-EEEEEEEEcCCC
Q 009441 419 GGKSVEFIDP-VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNY-FTERKWASASDG 496 (534)
Q Consensus 419 ~~~~i~lp~~-~~~i~~~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~-~~e~v~~~S~DG 496 (534)
...+.. ...+. .....++.+++.- .-+.++.+|.++|+......... ..+..... .-..+++.+.||
T Consensus 301 ----w~~~~~~~~~~~--~~~~~~~~l~v~~----~~g~l~~~d~~tG~~~~~~~~~~-~~~~~~~~~~~~~l~v~~~~G 369 (376)
T 3q7m_A 301 ----WTQSDLLHRLLT--SPVLYNGNLVVGD----SEGYLHWINVEDGRFVAQQKVDS-SGFQTEPVAADGKLLIQAKDG 369 (376)
T ss_dssp ----EEECTTTTSCCC--CCEEETTEEEEEC----TTSEEEEEETTTCCEEEEEECCT-TCBCSCCEEETTEEEEEBTTS
T ss_pred ----EeecccCCCccc--CCEEECCEEEEEe----CCCeEEEEECCCCcEEEEEecCC-CcceeCCEEECCEEEEEeCCC
Confidence 111100 00111 1111234555542 23689999999998643332111 11211111 124677777777
Q ss_pred c
Q 009441 497 T 497 (534)
Q Consensus 497 ~ 497 (534)
.
T Consensus 370 ~ 370 (376)
T 3q7m_A 370 T 370 (376)
T ss_dssp C
T ss_pred E
Confidence 5
No 310
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=70.72 E-value=5.3 Score=37.87 Aligned_cols=39 Identities=5% Similarity=-0.033 Sum_probs=30.4
Q ss_pred EEEEEE---cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 487 ERKWAS---ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 487 e~v~~~---S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
..+.+. +.||.++.++++.|++. . .+.|+||+.||+.+.
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~~~P~~~-~--~~~p~vv~lHG~~~~ 66 (304)
T 3d0k_A 25 NAIPYLDDDRNADRPFTLNTYRPYGY-T--PDRPVVVVQHGVLRN 66 (304)
T ss_dssp EEEEECC---CTTCCEEEEEEECTTC-C--TTSCEEEEECCTTCC
T ss_pred ceEEecccCCCCCceEEEEEEeCCCC-C--CCCcEEEEeCCCCCC
Confidence 445566 78999999999998865 2 467999999998765
No 311
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=70.52 E-value=78 Score=30.40 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=59.2
Q ss_pred EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCCCCCccc
Q 009441 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK 415 (534)
Q Consensus 336 v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~g~~~~ 415 (534)
+...++.+|+.+.. +.|+.+|.++.. ..|-...... ......+.++.+++... ++ .|+.++..+ |+.+.
T Consensus 99 ~~~~~~~v~v~~~~-----g~l~a~d~~tG~-~~W~~~~~~~-~~~~p~~~~~~v~v~~~-~g--~l~~~d~~t-G~~~W 167 (376)
T 3q7m_A 99 VTVSGGHVYIGSEK-----AQVYALNTSDGT-VAWQTKVAGE-ALSRPVVSDGLVLIHTS-NG--QLQALNEAD-GAVKW 167 (376)
T ss_dssp EEEETTEEEEEETT-----SEEEEEETTTCC-EEEEEECSSC-CCSCCEEETTEEEEECT-TS--EEEEEETTT-CCEEE
T ss_pred ceEeCCEEEEEcCC-----CEEEEEECCCCC-EEEEEeCCCc-eEcCCEEECCEEEEEcC-CC--eEEEEECCC-CcEEE
Confidence 44568899987753 579999987644 4573332211 12333445676666543 33 688888865 66332
Q ss_pred ccCCCceeeecCceeeEeC-CCCccCccEEEEEeccCCCCCeEEEEECCCCcEEE
Q 009441 416 SLQGGKSVEFIDPVYSIDP-SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVL 469 (534)
Q Consensus 416 ~~~~~~~i~lp~~~~~i~~-~~~~~~~~~l~~~~sS~~~P~~~y~~d~~~~~~~~ 469 (534)
....+........ ......+..+++.. .-+.++.+|.++|+...
T Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~v~~g~----~~g~l~~~d~~tG~~~w 212 (376)
T 3q7m_A 168 ------TVNLDMPSLSLRGESAPTTAFGAAVVGG----DNGRVSAVLMEQGQMIW 212 (376)
T ss_dssp ------EEECCC-----CCCCCCEEETTEEEECC----TTTEEEEEETTTCCEEE
T ss_pred ------EEeCCCCceeecCCCCcEEECCEEEEEc----CCCEEEEEECCCCcEEE
Confidence 1122111100000 11112234555532 23679999999888643
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=70.32 E-value=41 Score=32.87 Aligned_cols=160 Identities=8% Similarity=0.013 Sum_probs=82.8
Q ss_pred ceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceE-----eeeecCCceEEEEEEcCC---CcEEEEEecCcceeE
Q 009441 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC-----LYHEKDDIYSLGLQASES---KKFLFIASESKITRF 310 (534)
Q Consensus 239 ~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~l-----v~~e~d~~~~v~~~~S~D---g~~l~i~~~~~~~~e 310 (534)
..++|.|||.+|.+..+ ..+|++.+..++.. ..+ |+.+ ...-.++++++|| +.+|++.-.....+.
T Consensus 35 ~~ia~~pdG~llVter~----~G~I~~v~~~~g~~-~~v~~~~~v~~~-g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRD----EATITRVDAKTGRK-TELGEVPGVSPS-GEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp EEEEECTTSCEEEEETT----TCEEEEECTTTCCE-EEEEECTTCCCB-TTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred eEEEEcCCCcEEEEEec----CCEEEEEECCCCcE-eeecccCceeec-CCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 35899999988777521 34788876543321 111 1111 1223467888986 567776543333457
Q ss_pred EEEEeCCCC-----C--ceeEeeeccc--ce----eEEEeeeCCEEEEEEcCC---------CCCccEEEEEeCCCCC-C
Q 009441 311 VFYLDVSKP-----E--ELRVLTPRVV--GV----DTAASHRGNHFFITRRSD---------ELFNSELLACPVDNTS-E 367 (534)
Q Consensus 311 v~~~d~~~~-----~--~~~~l~~~~~--g~----~~~v~~~g~~lyi~tn~~---------~~~~~~L~~~~~~~~~-~ 367 (534)
|..+..... . ..+.+..... +. ...+.++| .||+.+... ....++|++++.+..- .
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~ 187 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAP 187 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccC
Confidence 777766541 1 2333332111 11 12255554 788876421 1246899999875320 0
Q ss_pred -----ceEEecCCCCceeeeEEEeC-CEEEEEEee-CCeeEEEEEE
Q 009441 368 -----TTVLIPHRESVKLQDIQLFI-DHLAVYERE-GGLQKITTYR 406 (534)
Q Consensus 368 -----~~~li~~~~~~~l~~~~~~~-~~lv~~~~~-~g~~~l~~~~ 406 (534)
..-++...- ....++.+.. +.|++.... ++..+|.++.
T Consensus 188 ~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 188 GNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIK 232 (347)
T ss_dssp TCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEEC
T ss_pred CCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEc
Confidence 001333221 2355677654 467666542 2335566553
No 313
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=69.16 E-value=2.1 Score=39.91 Aligned_cols=37 Identities=11% Similarity=-0.001 Sum_probs=25.4
Q ss_pred EEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 489 v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..+.+.||.++.+++..+.+. ..+++.|+||+.|||-
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~-~~~~~~p~vv~~HGgg 53 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQ-NENYTFPAIIICPGGG 53 (276)
T ss_dssp EECCCBTTBEEEEECCCC-------CCBCEEEEECCST
T ss_pred ccccCCCCeEEEEEEeCCccc-ccCCCCCEEEEEcCCc
Confidence 445678999999887766543 3447889999999963
No 314
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=68.93 E-value=3.1 Score=38.95 Aligned_cols=41 Identities=7% Similarity=-0.120 Sum_probs=29.7
Q ss_pred EEEEEEEEcCCCceecEEEEEeCCC--CCCCCCCcEEEEEcCCC
Q 009441 485 FTERKWASASDGTQIPICIVYRKNL--VKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 485 ~~e~v~~~S~DG~~VP~~lv~~k~~--~~~~~~~P~lL~gYGgy 526 (534)
..+.|.+.+.||.++++.+. |++. ...+++.|+||+.|||.
T Consensus 18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg 60 (283)
T 3bjr_A 18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGS 60 (283)
T ss_dssp CSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCST
T ss_pred CCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCc
Confidence 34678888899999999988 7751 01457889999999964
No 315
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=68.88 E-value=1.2e+02 Score=32.06 Aligned_cols=193 Identities=9% Similarity=0.048 Sum_probs=111.3
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC-C--ccceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-G--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~-~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
..++.+++++..|-++--.++ .|+..+++++.... .+. + ...+++....+ .+|++-. ...+|.+.++
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~----~I~r~~~~g~~~~~-v~~~g~~~P~GlAvD~~~~~LY~tD~----~~~~I~v~~~ 109 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLK----TISRAFMNGSALEH-VVEFGLDYPEGMAVDWLGKNLYWADT----GTNRIEVSKL 109 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTT----EEEEEETTSCSCEE-EECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEET
T ss_pred eEEEEEECCCCEEEEEECCCC----eEEEEECCCCCcEE-EEeCCCCCcceEEEEeCCCEEEEEEC----CCCEEEEEec
Confidence 445678888887766643332 57778887653321 111 1 12346665555 6766532 2357888887
Q ss_pred CCCCCCceEee-eecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccce-eEEEeeeCCEEEEE
Q 009441 269 EADQSNDICLY-HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFIT 346 (534)
Q Consensus 269 gt~~~~d~lv~-~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~-~~~v~~~g~~lyi~ 346 (534)
.... .+.+. +.-+. =.++++.|...+|+++-. .....|+.+++++.. .+.+....... ...+++.++.||+.
T Consensus 110 dG~~--~~~l~~~~l~~--P~~iavdp~~G~lY~tD~-g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 110 DGQH--RQVLVWKDLDS--PRALALDPAEGFMYWTEW-GGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp TSTT--CEEEECSSCCC--EEEEEEETTTTEEEEEEC-SSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEE
T ss_pred CCCc--EEEEEeCCCCC--cccEEEccCCCeEEEeCC-CCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEE
Confidence 5432 23343 22111 135677887778887642 225689999988754 44444321111 12256668899875
Q ss_pred EcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 347 tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
-. .+.+|.+++++.... + ++...- ....++.+++++||+.-..++ .|.+++..+
T Consensus 184 D~----~~~~I~~~d~dG~~~-~-v~~~~l-~~P~glav~~~~ly~tD~~~~--~I~~~dk~t 237 (628)
T 4a0p_A 184 DL----DTNLIESSNMLGLNR-E-VIADDL-PHPFGLTQYQDYIYWTDWSRR--SIERANKTS 237 (628)
T ss_dssp ET----TTTEEEEEETTSCSC-E-EEEECC-SCEEEEEEETTEEEEEETTTT--EEEEEETTT
T ss_pred EC----CCCEEEEEcCCCCce-E-EeeccC-CCceEEEEECCEEEEecCCCC--EEEEEECCC
Confidence 43 346899999865332 2 333221 235678888999988875444 577777543
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=68.25 E-value=77 Score=29.47 Aligned_cols=236 Identities=8% Similarity=-0.024 Sum_probs=112.2
Q ss_pred EEEEEECCCCCeecc-cc--CCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcC
Q 009441 218 TVYVIDIETGTPVGK-PL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE 294 (534)
Q Consensus 218 ~l~v~dl~tg~~~~~-~i--~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~ 294 (534)
.++++|+.+++.... .+ +.....++- -++.+|...-........++++++.+..- ..+-.-+.+....... .-
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~-~~ 100 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSW--YSKLGPPTPRDSLAAC-AA 100 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEE--EEEECCSSCCBSCEEE-EE
T ss_pred eEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeE--EECCCCCccccceeEE-EE
Confidence 466777777754321 12 222222222 24555554321122335788888765421 1111111222222222 23
Q ss_pred CCcEEEEEecC---cceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCC-CC----ccEEEEEeCCCC
Q 009441 295 SKKFLFIASES---KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDE-LF----NSELLACPVDNT 365 (534)
Q Consensus 295 Dg~~l~i~~~~---~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~-~~----~~~L~~~~~~~~ 365 (534)
+++..++.-.+ ...+++++.|..+.. |..+.+...... ......++.+|++....+ .. ...+...|+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~- 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTES-WHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT- 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT-
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCc-eEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC-
Confidence 55544443221 224679999988764 655533221111 112235788998865321 11 45677788654
Q ss_pred CCceE-EecCCCC-ceeeeEEEeCCEEEEEEeeCC---eeEEEEEECCCCCCcccccCCCcee-eecCceeeEeCCCCcc
Q 009441 366 SETTV-LIPHRES-VKLQDIQLFIDHLAVYEREGG---LQKITTYRLPAVGEPLKSLQGGKSV-EFIDPVYSIDPSESVF 439 (534)
Q Consensus 366 ~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~~g~~~~~~~~~~~i-~lp~~~~~i~~~~~~~ 439 (534)
..| .++.-+. ..-..+...++.|++..-.++ ...++++++.+ +.+ ..+ .+|........ ...
T Consensus 179 --~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W-------~~~~~~p~~r~~~~~--~~~ 246 (306)
T 3ii7_A 179 --ETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKL-NEW-------KMVSPMPWKGVTVKC--AAV 246 (306)
T ss_dssp --TEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTT-TEE-------EECCCCSCCBSCCEE--EEE
T ss_pred --CeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCC-CcE-------EECCCCCCCccceeE--EEE
Confidence 468 4443222 112344456888888753322 24688898875 332 111 12221100000 011
Q ss_pred CccEEEEEe--ccCCCCCeEEEEECCCCcEEEEEE
Q 009441 440 SSRILRFHY--SSLRTPPSVYDYDMDMGISVLKKI 472 (534)
Q Consensus 440 ~~~~l~~~~--sS~~~P~~~y~~d~~~~~~~~~~~ 472 (534)
++.+++.- .+...-..++.||+++++++.+..
T Consensus 247 -~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 247 -GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp -TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred -CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 22333321 122244678999999999887754
No 317
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=67.17 E-value=4.5 Score=37.02 Aligned_cols=35 Identities=11% Similarity=0.011 Sum_probs=26.7
Q ss_pred EEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCC
Q 009441 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS 525 (534)
Q Consensus 485 ~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGg 525 (534)
+++.+.+++.|| +|.+++..+++ ++.|+||+.||.
T Consensus 22 e~~~~~~~~~~g-~l~~~~~~p~~-----~~~p~vv~~HG~ 56 (249)
T 2i3d_A 22 HMPEVIFNGPAG-RLEGRYQPSKE-----KSAPIAIILHPH 56 (249)
T ss_dssp --CEEEEEETTE-EEEEEEECCSS-----TTCCEEEEECCC
T ss_pred ceeEEEEECCCc-eEEEEEEcCCC-----CCCCEEEEECCC
Confidence 334999999999 89999876653 357999999985
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=66.15 E-value=85 Score=29.18 Aligned_cols=109 Identities=8% Similarity=-0.056 Sum_probs=58.5
Q ss_pred cEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceE-EecC
Q 009441 297 KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPH 374 (534)
Q Consensus 297 ~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~-li~~ 374 (534)
.+|++.-.....++++..|..+.. |..+.+...... ..+...++.+|++..........+...+... ..| .++.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~---~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYS-WTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVK---DSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTE-EEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTT---TEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCC-EecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCC---CeEEECCC
Confidence 344443332225678888887764 655533221111 1222357889888754223345677787654 467 3433
Q ss_pred CCC-ceeeeEEEeCCEEEEEEeeC-C---eeEEEEEECCC
Q 009441 375 RES-VKLQDIQLFIDHLAVYEREG-G---LQKITTYRLPA 409 (534)
Q Consensus 375 ~~~-~~l~~~~~~~~~lv~~~~~~-g---~~~l~~~~l~~ 409 (534)
-+. ..-..+...++.||+..-.+ + ...++++++.+
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 221 11223445688888875433 2 34688888875
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=66.11 E-value=99 Score=29.94 Aligned_cols=118 Identities=10% Similarity=0.059 Sum_probs=60.2
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCC-eecc-cc--C--CccceeEEccC---C-eEEEEEEC--CC-CC
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-PVGK-PL--V--GVTASVEWAGN---E-ALVYITMD--EI-LR 259 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~-~~~~-~i--~--~~~~~~~Ws~D---g-~l~Y~~~d--~~-~r 259 (534)
...+.+.|||+ +|..+..| .|+++|. +|+ .+.. .+ . +...++++.|| + .||.+... .. ..
T Consensus 31 P~~ia~~pdG~--l~V~e~~g----~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 31 PWSIAPLGGGR--YLVTERPG----RLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp EEEEEEEETTE--EEEEETTT----EEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CeEEEEcCCCe--EEEEeCCC----EEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 45678999998 33344444 5676763 454 2111 01 1 12345899998 4 44433221 11 11
Q ss_pred CceEEEeecCCCC---CCceEeeee-cC-Cc-eEEEEEEcCCCcEEEEEecCcc-----------eeEEEEEeCCC
Q 009441 260 PDKAWLHKLEADQ---SNDICLYHE-KD-DI-YSLGLQASESKKFLFIASESKI-----------TRFVFYLDVSK 318 (534)
Q Consensus 260 ~~~v~~~~lgt~~---~~d~lv~~e-~d-~~-~~v~~~~S~Dg~~l~i~~~~~~-----------~~ev~~~d~~~ 318 (534)
..+|+++++.... .+.+.++.. +. .. +--.+.+.+||+ |+++..+.. ...|+.++.++
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 2578888764321 112334431 11 11 112477899995 677653311 23688887754
No 320
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=65.34 E-value=1.4e+02 Score=31.53 Aligned_cols=153 Identities=8% Similarity=-0.011 Sum_probs=88.4
Q ss_pred EEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecccc-CCc--cceeEEccCC-eEEEEEECCCCCCceEEEeec
Q 009441 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGV--TASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (534)
Q Consensus 193 l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i-~~~--~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~l 268 (534)
..++++.+.++.|.++-. .. ..|.+.+++++.... .+ .+. -.+++..|.+ .+|++-. ....+|++..+
T Consensus 82 P~GlAvD~~~~~LY~tD~-~~---~~I~v~~~dG~~~~~-l~~~~l~~P~~iavdp~~G~lY~tD~---g~~~~I~r~~~ 153 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADT-GT---NRIEVSKLDGQHRQV-LVWKDLDSPRALALDPAEGFMYWTEW---GGKPKIDRAAM 153 (628)
T ss_dssp CCEEEEETTTTEEEEEET-TT---TEEEEEETTSTTCEE-EECSSCCCEEEEEEETTTTEEEEEEC---SSSCEEEEEET
T ss_pred cceEEEEeCCCEEEEEEC-CC---CEEEEEecCCCcEEE-EEeCCCCCcccEEEccCCCeEEEeCC---CCCCEEEEEeC
Confidence 345678888888877643 32 278899987653211 11 111 2357777755 6666532 22458999887
Q ss_pred CCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEc
Q 009441 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRR 348 (534)
Q Consensus 269 gt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn 348 (534)
... ....+.. +-.+=.+++++++++.|++.-. ..+.|+.+++++.. .+.+... ...-+.+..+++++|+ |+
T Consensus 154 dG~--~~~~l~~--~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~-~~v~~~~-l~~P~glav~~~~ly~-tD 224 (628)
T 4a0p_A 154 DGS--ERTTLVP--NVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLN-REVIADD-LPHPFGLTQYQDYIYW-TD 224 (628)
T ss_dssp TSC--SCEEEEC--SCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEEEEC-CSCEEEEEEETTEEEE-EE
T ss_pred CCC--ceEEEEC--CCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCc-eEEeecc-CCCceEEEEECCEEEE-ec
Confidence 543 2334443 2123336788899888877543 34578889987754 2333221 1222445566788875 44
Q ss_pred CCCCCccEEEEEeCCCC
Q 009441 349 SDELFNSELLACPVDNT 365 (534)
Q Consensus 349 ~~~~~~~~L~~~~~~~~ 365 (534)
. .+.+|.+++..+.
T Consensus 225 ~---~~~~I~~~dk~tg 238 (628)
T 4a0p_A 225 W---SRRSIERANKTSG 238 (628)
T ss_dssp T---TTTEEEEEETTTC
T ss_pred C---CCCEEEEEECCCC
Confidence 3 2467888885443
No 321
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=64.93 E-value=3.4 Score=45.50 Aligned_cols=43 Identities=28% Similarity=0.407 Sum_probs=32.9
Q ss_pred CCCCCcEEEEEEE-----EcCCCce--ecEEEEEeCCCCCCCCCCcEEE--EEcCC
Q 009441 479 FDTNNYFTERKWA-----SASDGTQ--IPICIVYRKNLVKLDGSDPLLL--YGYGS 525 (534)
Q Consensus 479 ~d~~~~~~e~v~~-----~S~DG~~--VP~~lv~~k~~~~~~~~~P~lL--~gYGg 525 (534)
|+......+.+++ +.+||++ |.+.|+.|++. ++.|+|| ++||+
T Consensus 161 ~~~~~~~~e~~~ve~~v~~~~DG~~d~L~a~l~~P~~~----~k~PvIv~~~pYg~ 212 (763)
T 1lns_A 161 FDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKST----EKLPVVMTASPYHL 212 (763)
T ss_dssp SCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCS----SCEEEEEEECSSTT
T ss_pred cCCccceeeeeEEecCcccCCCCCeeeEEEEEEecCCC----CcccEEEecCCcCC
Confidence 4554556666666 5689999 99999999964 5899999 55664
No 322
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=63.37 E-value=74 Score=33.26 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=18.5
Q ss_pred CCCC--EEEEEEcCCCCeEEEEEEEECCCCCee
Q 009441 200 PDNK--LVAYAEDTKGDEIYTVYVIDIETGTPV 230 (534)
Q Consensus 200 PDG~--~LA~~~d~~G~E~~~l~v~dl~tg~~~ 230 (534)
+||+ .+.+..+.+| .++++|.++|+.+
T Consensus 311 ~~G~~~~~v~~~~~~G----~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNG----ILYTLNRENGNLI 339 (571)
T ss_dssp ETTEEEEEEEEECTTS----EEEEEETTTCCEE
T ss_pred cCCcEEEEEEEeCCCc----EEEEEECCCCCEE
Confidence 4676 4555555555 6888998888765
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=60.94 E-value=1.1e+02 Score=29.50 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=62.7
Q ss_pred ceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEeeee----cCCceEEEEEEcCC---CcEEEEEecCcc---e
Q 009441 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE----KDDIYSLGLQASES---KKFLFIASESKI---T 308 (534)
Q Consensus 239 ~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e----~d~~~~v~~~~S~D---g~~l~i~~~~~~---~ 308 (534)
..++|.|||.+|.+.. ..+|++.+-|+ ...+..- .....-.++++++| +++|++...... .
T Consensus 34 ~~ia~~pdG~l~V~e~-----~g~I~~i~~g~----~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 34 WALAFLPDGGMLIAER-----PGRIRLFREGR----LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp EEEEECTTSCEEEEET-----TTEEEEEETTE----EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred eEEEEcCCCeEEEEeC-----CCeEEEEECCC----ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 3589999998666542 25788877221 1112110 01223457889999 777777543211 2
Q ss_pred eEEEEEeCCCCC--ceeEeeeccc---c-----eeEEEeeeCCEEEEEEcCCC---------CCccEEEEEeCCC
Q 009441 309 RFVFYLDVSKPE--ELRVLTPRVV---G-----VDTAASHRGNHFFITRRSDE---------LFNSELLACPVDN 364 (534)
Q Consensus 309 ~ev~~~d~~~~~--~~~~l~~~~~---g-----~~~~v~~~g~~lyi~tn~~~---------~~~~~L~~~~~~~ 364 (534)
+.|+.++.++.. ..+.+..... + ....++++| .||+.....+ ...++|++++.+.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 678888876532 1233322111 1 122355655 7887653211 2347999998753
No 324
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=60.26 E-value=1.1e+02 Score=28.50 Aligned_cols=154 Identities=10% Similarity=0.014 Sum_probs=78.1
Q ss_pred ceeEEccCCeEEEEEECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC
Q 009441 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (534)
Q Consensus 239 ~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~ 318 (534)
.+++|.++|.+|++... ..+|++++..+. -..++.. +..-.++.+++||+. ++.........++.++..+
T Consensus 35 egia~~~~g~lyv~d~~----~~~I~~~d~~g~---~~~~~~~--~~~p~gia~~~dG~l-~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHE----VGEIVSITPDGN---QQIHATV--EGKVSGLAFTSNGDL-VATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp EEEEECTTSCEEEEETT----TTEEEEECTTCC---EEEEEEC--SSEEEEEEECTTSCE-EEEEECTTSCEEEEEECTT
T ss_pred ceEEECCCCCEEEEeCC----CCeEEEECCCCc---eEEEEeC--CCCceeEEEcCCCcE-EEEeccCCcceEEEEcCCC
Confidence 45899998887666422 347888775432 1223322 223345788999994 4433222223577777666
Q ss_pred CCceeEeeecccce-eEEE-eeeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEE--------ecCCCCceeeeEEEeCC
Q 009441 319 PEELRVLTPRVVGV-DTAA-SHRGNHFFITRRSDELFNSELLACPVDNTSETTVL--------IPHRESVKLQDIQLFID 388 (534)
Q Consensus 319 ~~~~~~l~~~~~g~-~~~v-~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~l--------i~~~~~~~l~~~~~~~~ 388 (534)
+. +..+.....+. ...+ ...++.+|+ ++. .+++|++++.......-+. .+...-....++...++
T Consensus 105 g~-~~~~~~~~~~~~~~g~~~~~~~~~~v-~d~---~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~ 179 (306)
T 2p4o_A 105 GT-VETLLTLPDAIFLNGITPLSDTQYLT-ADS---YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN 179 (306)
T ss_dssp SC-EEEEEECTTCSCEEEEEESSSSEEEE-EET---TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT
T ss_pred Ce-EEEEEeCCCccccCcccccCCCcEEE-EEC---CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCC
Confidence 54 44333221110 1111 123455555 332 2457888886532101111 11111112345555567
Q ss_pred EEEEEEeeCCeeEEEEEECCC
Q 009441 389 HLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 389 ~lv~~~~~~g~~~l~~~~l~~ 409 (534)
+||+....+ .+|++++++.
T Consensus 180 ~lyv~d~~~--~~I~~~~~~~ 198 (306)
T 2p4o_A 180 FLYVSNTEK--MLLLRIPVDS 198 (306)
T ss_dssp EEEEEETTT--TEEEEEEBCT
T ss_pred EEEEEeCCC--CEEEEEEeCC
Confidence 888877644 4788888873
No 325
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=59.12 E-value=5 Score=38.70 Aligned_cols=26 Identities=15% Similarity=0.027 Sum_probs=21.1
Q ss_pred ceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 497 ~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
..|++.++.|++- ++.|+|||.|||-
T Consensus 65 ~~i~~~~~~p~~~----~~~p~vv~~HGGg 90 (322)
T 3fak_A 65 AGCAAEWVRAPGC----QAGKAILYLHGGG 90 (322)
T ss_dssp TTEEEEEEECTTC----CTTCEEEEECCST
T ss_pred CCeEEEEEeCCCC----CCccEEEEEcCCc
Confidence 4599999988754 4689999999974
No 326
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=58.33 E-value=13 Score=36.96 Aligned_cols=44 Identities=11% Similarity=0.000 Sum_probs=34.6
Q ss_pred CCCcEEEEEEEEcCC--C--ceecEEEEEeCCCCCCCCCCcEEEEEcCCCC
Q 009441 481 TNNYFTERKWASASD--G--TQIPICIVYRKNLVKLDGSDPLLLYGYGSYE 527 (534)
Q Consensus 481 ~~~~~~e~v~~~S~D--G--~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg 527 (534)
+......+|.|.|.| | +.+-++|+.|++. .++.|+|++.||.-+
T Consensus 38 ~~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~---~~~~PvV~~~HG~~~ 85 (377)
T 4ezi_A 38 HYDLQLYKINYKTQSPDGNLTIASGLVAMPIHP---VGQVGIISYQHGTRF 85 (377)
T ss_dssp CCCEEEEEEEEEEECTTSCEEEEEEEEEEESSC---SSCEEEEEEECCCCC
T ss_pred CCCcEEEEEEEEEECCCCCEEEEEEEEEECCCC---CCCCcEEEEeCCCcC
Confidence 345678999999987 5 4566899999864 368999999999763
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=58.19 E-value=1.2e+02 Score=28.08 Aligned_cols=202 Identities=13% Similarity=0.055 Sum_probs=100.9
Q ss_pred CCCCEEEEEEcCCCCeEEEEEEEECCCCC---eecc-cc--CCccceeEEccCCeEEEEE-ECCCCCCceEEEeecCCCC
Q 009441 200 PDNKLVAYAEDTKGDEIYTVYVIDIETGT---PVGK-PL--VGVTASVEWAGNEALVYIT-MDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 200 PDG~~LA~~~d~~G~E~~~l~v~dl~tg~---~~~~-~i--~~~~~~~~Ws~Dg~l~Y~~-~d~~~r~~~v~~~~lgt~~ 272 (534)
-+++.++++-..++.-...++++|+.+++ .... .+ +.....++- -++.+|... .+.......++++++.+..
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 36776666533322223468999999887 3321 12 222222222 255665553 2222223578888876542
Q ss_pred CCceEeeeecCCceEEEEEEcCCCcEEEEEecC--cceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcC
Q 009441 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (534)
Q Consensus 273 ~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~--~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~ 349 (534)
-. .+-.-+.+....... .-+++..++.-.+ ...++++..|..+.. |..+.+...... ......++.+|++...
T Consensus 140 W~--~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WS--MLGDMQTAREGAGLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGVALLNDHIYVVGGF 215 (301)
T ss_dssp EE--EEEECSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred EE--ECCCCCCCcccceEE-EECCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcccccceEEEECCEEEEEeCC
Confidence 11 111111222222222 2255544443211 234688999988764 665543221111 1233457899998754
Q ss_pred CC-CCccEEEEEeCCCCCCceE-EecCCCC-ceeeeEEEeCCEEEEEEeeCC---eeEEEEEECCC
Q 009441 350 DE-LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQLFIDHLAVYEREGG---LQKITTYRLPA 409 (534)
Q Consensus 350 ~~-~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~ 409 (534)
.+ .....+...|+.+ ..| .++.-+. ..-..+...++.|++..-.++ ...++++++.+
T Consensus 216 ~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRT---DSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CSSSBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCCcccceEEEEeCCC---CcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 22 1235677888754 467 4433221 112234456788887754433 25678888874
No 328
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=57.54 E-value=12 Score=33.96 Aligned_cols=38 Identities=11% Similarity=-0.234 Sum_probs=29.5
Q ss_pred EEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 485 ~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
..+.++++ .||.+|.+++..|++- +.|+||+.||+.+.
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~~-----~~p~vv~~HG~~~~ 58 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFGE-----IYDMAIIFHGFTAN 58 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSSS-----SEEEEEEECCTTCC
T ss_pred cceEEEec-cCCEEEEEEEEcCCCC-----CCCEEEEEcCCCCC
Confidence 45556555 6999999999977642 47999999998876
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.10 E-value=80 Score=32.11 Aligned_cols=107 Identities=13% Similarity=0.047 Sum_probs=55.2
Q ss_pred EEEEEECCCCC-EEEEEEcCCCCeEEEEEEEECCCCC---eecc---cc--------CCccceeEEccC---CeEEEEEE
Q 009441 193 VGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGT---PVGK---PL--------VGVTASVEWAGN---EALVYITM 254 (534)
Q Consensus 193 l~~~~~SPDG~-~LA~~~d~~G~E~~~l~v~dl~tg~---~~~~---~i--------~~~~~~~~Ws~D---g~l~Y~~~ 254 (534)
-..+.+.|||+ .|.++.. .| .|++++.++.. .+.+ .+ ++..-++++.|| ++.+|+.+
T Consensus 16 P~~~a~~pdG~~rl~V~er-~G----~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEK-EG----YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp EEEEECCSSSSCCEEEEET-TT----EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred ceEEEECCCCCeEEEEEeC-Cc----eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 34568999996 5555544 45 57888754331 1111 11 111224889887 22333332
Q ss_pred --CCCC---C----CceEEEeecCCC------CCCceEeeeec--C-CceEEEEEEcCCCcEEEEEecC
Q 009441 255 --DEIL---R----PDKAWLHKLEAD------QSNDICLYHEK--D-DIYSLGLQASESKKFLFIASES 305 (534)
Q Consensus 255 --d~~~---r----~~~v~~~~lgt~------~~~d~lv~~e~--d-~~~~v~~~~S~Dg~~l~i~~~~ 305 (534)
+... . ..+|.++++..+ ..+.++|++-. . ..+--.+.+.||| +|+|...+
T Consensus 91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG-~LYv~~Gd 158 (463)
T 2wg3_C 91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDG-FLYIILGD 158 (463)
T ss_dssp EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTS-CEEEEECC
T ss_pred eCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCC-cEEEEeCC
Confidence 1110 1 147888887432 11234555422 1 1233357899999 57777654
No 330
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=56.76 E-value=1.4e+02 Score=28.77 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=71.8
Q ss_pred CCCcEEEEEEEE---CCCCCEEEEEEcC------CCCe---EEEEEEEECC---CCCeecc-cc----CC----------
Q 009441 187 GRGFYSVGCFQV---SPDNKLVAYAEDT------KGDE---IYTVYVIDIE---TGTPVGK-PL----VG---------- 236 (534)
Q Consensus 187 ~~~~~~l~~~~~---SPDG~~LA~~~d~------~G~E---~~~l~v~dl~---tg~~~~~-~i----~~---------- 236 (534)
+.+.....++.| .|+|++++. .+. .|.+ ...|..+|+. +|+.+.. .+ ++
T Consensus 59 g~~~~~~sGl~~~~~D~~grL~vv-~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~ 137 (334)
T 2p9w_A 59 GDGEQQMSGLSLLTHDNSKRLFAV-MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPF 137 (334)
T ss_dssp SCCSEEEEEEEESSSSSCCEEEEE-EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCE
T ss_pred CCCcceeeEEEEeccCCCCcEEEE-EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccccccccccc
Confidence 344566788999 699888876 442 1211 3568899999 7876421 11 11
Q ss_pred ccceeEEccCCeEEEEEECCCCCC-ceEEEeecCCCCCCceEeeeec-CC--ce-EEEEEEcCCCcEEEEEecCcceeEE
Q 009441 237 VTASVEWAGNEALVYITMDEILRP-DKAWLHKLEADQSNDICLYHEK-DD--IY-SLGLQASESKKFLFIASESKITRFV 311 (534)
Q Consensus 237 ~~~~~~Ws~Dg~l~Y~~~d~~~r~-~~v~~~~lgt~~~~d~lv~~e~-d~--~~-~v~~~~S~Dg~~l~i~~~~~~~~ev 311 (534)
....++-.++|..|.+-. .+ ..||+.+.... .-...+.+. +. .. .-++..+|||+.|++.-+ ...+
T Consensus 138 ~~nDvavD~~GnaYVt~s----~~~~~I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~---~g~L 208 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFA----LGMPAIARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG---PRAL 208 (334)
T ss_dssp EEEEEEECTTSCEEEEEE----ESSCEEEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS---SSSE
T ss_pred CCceeEECCCCCEEEeCC----CCCCeEEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC---CCeE
Confidence 123467777776665532 23 46887776432 112222221 11 11 226789999998876543 5678
Q ss_pred EEEeCCCC
Q 009441 312 FYLDVSKP 319 (534)
Q Consensus 312 ~~~d~~~~ 319 (534)
+.+|+..+
T Consensus 209 ~~fD~~~p 216 (334)
T 2p9w_A 209 TAFDVSKP 216 (334)
T ss_dssp EEEECSSS
T ss_pred EEEcCCCC
Confidence 99898754
No 331
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=55.24 E-value=1.3e+02 Score=32.03 Aligned_cols=26 Identities=23% Similarity=0.356 Sum_probs=18.0
Q ss_pred CCC--EEEEEEcCCCCeEEEEEEEECCCCCee
Q 009441 201 DNK--LVAYAEDTKGDEIYTVYVIDIETGTPV 230 (534)
Q Consensus 201 DG~--~LA~~~d~~G~E~~~l~v~dl~tg~~~ 230 (534)
||+ .+++..+.+| .|+++|.++|+.+
T Consensus 323 dG~~~~~l~~~~~~G----~l~~lD~~tG~~l 350 (677)
T 1kb0_A 323 AGKPRKVILHAPKNG----FFFVLDRTNGKFI 350 (677)
T ss_dssp TTEEEEEEEECCTTS----EEEEEETTTCCEE
T ss_pred CCcEeeEEEEECCCC----EEEEEECCCCCEe
Confidence 674 4445445444 6999999999875
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=54.42 E-value=2.2e+02 Score=30.05 Aligned_cols=192 Identities=10% Similarity=0.083 Sum_probs=101.5
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC-C--ccceeEEccCC-eEEEEEECCCCCCceEEEeecCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-G--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~-~--~~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lgt 270 (534)
++.+.+.+..|-++-...+ .|+..+++++.... .+. + ...+++....+ .+|++-. ...+|...++..
T Consensus 353 ~ld~d~~~~~ly~sD~~~~----~I~r~~~~g~~~~~-v~~~~~~~p~GlAvD~~~~~lY~tD~----~~~~I~v~~~~G 423 (619)
T 3s94_A 353 AIDYDPVEGYIYWTDDEVR----AIRRSFIDGSGSQF-VVTAQIAHPDGIAVDWVARNLYWTDT----GTDRIEVTRLNG 423 (619)
T ss_dssp EEEEETTTTEEEEEETTTT----EEEEEETTSCSCEE-EECSSCSCCCEEEEETTTTEEEEEET----TTTEEEEEETTS
T ss_pred EEEEEcCCCeEEEEeCCCC----eEEEEEcCCCccEE-EEECCCCCcCceEEecccCcEEEEeC----CCCcEEEEeCCC
Confidence 3455555555544422221 46666666543211 111 1 12346665445 6766631 234787777754
Q ss_pred CCCCceEeeee-cCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeeccccee--EEEeeeCCEEEEEE
Q 009441 271 DQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITR 347 (534)
Q Consensus 271 ~~~~d~lv~~e-~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~--~~v~~~g~~lyi~t 347 (534)
.. ...+..+ -+. =-++++.|...+|+++-... ...|+.+++++.. .+.+....-..- ..+++.++.||+.-
T Consensus 424 ~~--~~~l~~~~l~~--P~~iavdp~~G~ly~tD~g~-~~~I~r~~~dG~~-~~~l~~~~l~~P~GlalD~~~~~LY~aD 497 (619)
T 3s94_A 424 TM--RKILISEDLEE--PRAIVLDPMVGYMYWTDWGE-IPKIERAALDGSD-RVVLVNTSLGWPNGLALDYDEGKIYWGD 497 (619)
T ss_dssp CS--CEEEECTTCCS--EEEEEEETTTTEEEEEECSS-SCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred Ce--EEEEEECCCCC--eeeEEEEcCCCcEEEecCCC-CCEEEEEccCCCc-cEEEEeCCCCCCeeeEEcccCCEEEEEE
Confidence 42 2344432 111 12466778777787764322 4578888887643 333332111111 22566688998864
Q ss_pred cCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeCCEEEEEEeeCCeeEEEEEECCC
Q 009441 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 348 n~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
. .+.+|.+++++.... +.++...- ....++.+++++||+.... ...|.+++..+
T Consensus 498 ~----~~~~I~~~~~dG~~~-~~~~~~~l-~~P~glav~~~~ly~tD~~--~~~I~~~~k~~ 551 (619)
T 3s94_A 498 A----KTDKIEVMNTDGTGR-RVLVEDKI-PHIFGFTLLGDYVYWTDWQ--RRSIERVHKRS 551 (619)
T ss_dssp T----TTTEEEEEESSSCCC-EEEEECCC-CSSCCEEEETTEEEEECTT--SSCEEEEESSS
T ss_pred C----CCCEEEEEecCCCce-EEEeccCC-CCcEEEEEECCEEEEeecC--CCeEEEEEcCC
Confidence 3 346899999865432 22333221 1245678888988777654 34677777764
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=53.25 E-value=1.4e+02 Score=27.53 Aligned_cols=207 Identities=11% Similarity=0.015 Sum_probs=98.7
Q ss_pred CCeEEEEE-ECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEec--CcceeEEEEEeCCCCCce
Q 009441 246 NEALVYIT-MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASE--SKITRFVFYLDVSKPEEL 322 (534)
Q Consensus 246 Dg~l~Y~~-~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~--~~~~~ev~~~d~~~~~~~ 322 (534)
++.+|... .+.......+++++..+..-. .+-.-+.+........ -+++..++.-. ....+++++.|..+.. |
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~--~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWT--SVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNE-W 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEE--EECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTE-E
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCcee--eCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCe-E
Confidence 44555543 222223356888887654211 1111112222222222 25554444332 2234689999988764 6
Q ss_pred eEeeeccccee-EEEeeeCCEEEEEEcCCCC---CccEEEEEeCCCCCCceE-EecCCCC-ceeeeEEEeCCEEEEEEee
Q 009441 323 RVLTPRVVGVD-TAASHRGNHFFITRRSDEL---FNSELLACPVDNTSETTV-LIPHRES-VKLQDIQLFIDHLAVYERE 396 (534)
Q Consensus 323 ~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~~---~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~ 396 (534)
..+.+...... ......++.+|+.....+. ....+...|+.+ ..| .++.-+. ..-..+...++.|++..-.
T Consensus 137 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT---NEWTYIAEMSTRRSGAGVGVLNNLLYAVGGH 213 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred eecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC---CcEEECCCCccccccccEEEECCEEEEECCC
Confidence 65543221111 1223357889988653211 134577777654 467 4433221 1223445568888888644
Q ss_pred CC---eeEEEEEECCCCCCcccccCCCceee-ecCceeeEeCCCCccCccEEEEEeccC---CCCCeEEEEECCCCcEEE
Q 009441 397 GG---LQKITTYRLPAVGEPLKSLQGGKSVE-FIDPVYSIDPSESVFSSRILRFHYSSL---RTPPSVYDYDMDMGISVL 469 (534)
Q Consensus 397 ~g---~~~l~~~~l~~~g~~~~~~~~~~~i~-lp~~~~~i~~~~~~~~~~~l~~~~sS~---~~P~~~y~~d~~~~~~~~ 469 (534)
++ ...++++++.+ +.+ ..+. +|..-..... ... ++.+++ +.+. ..-..++.||+++++++.
T Consensus 214 ~~~~~~~~~~~yd~~~-~~W-------~~~~~~~~~r~~~~~--~~~-~~~i~v-~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTT-NAW-------RQVADMNMCRRNAGV--CAV-NGLLYV-VGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp SSSSBCCCEEEEETTT-TEE-------EEECCCSSCCBSCEE--EEE-TTEEEE-ECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCCcccceEEEEeCCC-CCE-------eeCCCCCCccccCeE--EEE-CCEEEE-ECCcCCCcccccEEEEcCCCCeEEE
Confidence 33 34688999875 332 1121 2211100000 011 223333 2222 123568999999998766
Q ss_pred EE
Q 009441 470 KK 471 (534)
Q Consensus 470 ~~ 471 (534)
+.
T Consensus 282 ~~ 283 (302)
T 2xn4_A 282 VS 283 (302)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 334
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=52.91 E-value=14 Score=33.96 Aligned_cols=35 Identities=14% Similarity=0.066 Sum_probs=27.9
Q ss_pred EEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 490 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 490 ~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
.+++.||.+|.+.+..+++ ++.|+||+.||..+..
T Consensus 21 ~~~~~~g~~l~~~~~~~~~-----~~~~~vv~~hG~~~~~ 55 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG-----TPKALIFVSHGAGEHS 55 (303)
T ss_dssp EEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCG
T ss_pred eEecCCCeEEEEEEeccCC-----CCCeEEEEECCCCchh
Confidence 6788999999999886653 3579999999986643
No 335
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=51.44 E-value=10 Score=38.03 Aligned_cols=40 Identities=10% Similarity=0.016 Sum_probs=29.7
Q ss_pred cEEEEEEEEcC-CCceecEEEEEeCCCCCCCCCCcEEEEEcCC
Q 009441 484 YFTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGS 525 (534)
Q Consensus 484 ~~~e~v~~~S~-DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGg 525 (534)
..++.+.+.|+ .|..++++|+.|++. . ++++|+|++.||+
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~-~-~~~~PvlvllHG~ 206 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDV-T-AEERPLAVLLDGE 206 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC-------CCCCEEEESSHH
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCC-C-CCCCCEEEEeCCH
Confidence 35677788876 789999999999876 4 5789999999995
No 336
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=49.69 E-value=1.2e+02 Score=30.00 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=29.8
Q ss_pred EEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCe-----ec------ccc-CC-ccceeEEccCCe
Q 009441 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-----VG------KPL-VG-VTASVEWAGNEA 248 (534)
Q Consensus 192 ~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~-----~~------~~i-~~-~~~~~~Ws~Dg~ 248 (534)
.+..+.|||+| ++++.. +| .+++++.++++. ++ +.+ .+ ....+.|++++.
T Consensus 164 ~Vs~v~WSpkG--~~vg~~-dg----~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 164 NVTSFDVTNSQ--LAVLLK-DR----SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp SEEEEEECSSE--EEEEET-TS----CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred CceEEEEcCCc--eEEEEc-CC----cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 47789999999 444443 34 356667766653 21 101 12 235699999883
No 337
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=48.41 E-value=2.7e+02 Score=29.34 Aligned_cols=154 Identities=9% Similarity=0.012 Sum_probs=85.0
Q ss_pred EEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccC-Cc--cceeEEccCC-eEEEEEECCCCCCceEEEeecC
Q 009441 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GV--TASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (534)
Q Consensus 194 ~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~-~~--~~~~~Ws~Dg-~l~Y~~~d~~~r~~~v~~~~lg 269 (534)
.++++.+.++.|-++ |.+. ..|.+.++++... ...+. +. -.+++..|.. .+|++-. ....+|++..+.
T Consensus 395 ~GlAvD~~~~~lY~t-D~~~---~~I~v~~~~G~~~-~~l~~~~l~~P~~iavdp~~G~ly~tD~---g~~~~I~r~~~d 466 (619)
T 3s94_A 395 DGIAVDWVARNLYWT-DTGT---DRIEVTRLNGTMR-KILISEDLEEPRAIVLDPMVGYMYWTDW---GEIPKIERAALD 466 (619)
T ss_dssp CEEEEETTTTEEEEE-ETTT---TEEEEEETTSCSC-EEEECTTCCSEEEEEEETTTTEEEEEEC---SSSCEEEEEETT
T ss_pred CceEEecccCcEEEE-eCCC---CcEEEEeCCCCeE-EEEEECCCCCeeeEEEEcCCCcEEEecC---CCCCEEEEEccC
Confidence 356788878877666 4322 2688888875532 11111 21 2347777764 6666642 224578888774
Q ss_pred CCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEEEeeeCCEEEEEEcC
Q 009441 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS 349 (534)
Q Consensus 270 t~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g~~lyi~tn~ 349 (534)
.. ..+.+..+ +-.+=.+++++++++.|++.-. ....|+.+++++.. .+.+....-..-+.+...+++||+ |+.
T Consensus 467 G~--~~~~l~~~-~l~~P~GlalD~~~~~LY~aD~--~~~~I~~~~~dG~~-~~~~~~~~l~~P~glav~~~~ly~-tD~ 539 (619)
T 3s94_A 467 GS--DRVVLVNT-SLGWPNGLALDYDEGKIYWGDA--KTDKIEVMNTDGTG-RRVLVEDKIPHIFGFTLLGDYVYW-TDW 539 (619)
T ss_dssp SC--SCEEEECS-SCSCEEEEEEETTTTEEEEEET--TTTEEEEEESSSCC-CEEEEECCCCSSCCEEEETTEEEE-ECT
T ss_pred CC--ccEEEEeC-CCCCCeeeEEcccCCEEEEEEC--CCCEEEEEecCCCc-eEEEeccCCCCcEEEEEECCEEEE-eec
Confidence 32 22333321 1122335788888888877532 23478888887654 333332211111335556787765 443
Q ss_pred CCCCccEEEEEeCCCC
Q 009441 350 DELFNSELLACPVDNT 365 (534)
Q Consensus 350 ~~~~~~~L~~~~~~~~ 365 (534)
.+.+|.+++..++
T Consensus 540 ---~~~~I~~~~k~~g 552 (619)
T 3s94_A 540 ---QRRSIERVHKRSA 552 (619)
T ss_dssp ---TSSCEEEEESSSC
T ss_pred ---CCCeEEEEEcCCC
Confidence 3467888887554
No 338
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=48.27 E-value=17 Score=34.49 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.5
Q ss_pred EEEEE-EEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 485 FTERK-WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 485 ~~e~v-~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..+.+ ++++.||.+|.+.+..+.+ ++.|+||+.||..+..
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~-----~~~p~vv~~HG~~~~~ 73 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTG-----TPKALIFVSHGAGEHS 73 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSS-----CCSEEEEEECCTTCCG
T ss_pred ccccCceEEccCCeEEEEEEeCCCC-----CCCcEEEEECCCCccc
Confidence 33444 6788999999999887653 3579999999987643
No 339
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=45.76 E-value=19 Score=35.73 Aligned_cols=39 Identities=13% Similarity=0.068 Sum_probs=28.6
Q ss_pred cEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 484 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 484 ~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
...+++.++. ||.+|+++++. .+ +++.|+||+.||.-+.
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~-~~----~~~~p~vv~~HG~~~~ 171 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAII-SE----DKAQDTLIVVGGGDTS 171 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEEC-CS----SSCCCEEEEECCSSCC
T ss_pred CCcEEEEEeE-CCeEEEEEEEc-CC----CCCCCEEEEECCCCCC
Confidence 4457787776 79999999773 32 2456999999997553
No 340
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=45.24 E-value=1.9e+02 Score=26.64 Aligned_cols=201 Identities=10% Similarity=0.000 Sum_probs=98.6
Q ss_pred CCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc--CCccceeEEccCCeEEEEE-ECCCCCCceEEEeecCCCCCCce
Q 009441 201 DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL--VGVTASVEWAGNEALVYIT-MDEILRPDKAWLHKLEADQSNDI 276 (534)
Q Consensus 201 DG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i--~~~~~~~~Ws~Dg~l~Y~~-~d~~~r~~~v~~~~lgt~~~~d~ 276 (534)
+++.++++-..+......++++|+.+++.... .+ +.....++- -++.+|... .+.......++++++.+..-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-- 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-- 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEE--
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEe--
Confidence 67766665332222234688999998864332 12 222222222 255565554 332222346888887654211
Q ss_pred EeeeecCCceEEEEEEcCCCcEEEEEec-Cc---ceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCC
Q 009441 277 CLYHEKDDIYSLGLQASESKKFLFIASE-SK---ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDE 351 (534)
Q Consensus 277 lv~~e~d~~~~v~~~~S~Dg~~l~i~~~-~~---~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~ 351 (534)
.+-.-+.+....... .-+++..++.-. .. ..++++..|..+.. |..+.+...... ......++.+|++...++
T Consensus 138 ~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 215 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNE-WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDG 215 (302)
T ss_dssp EECCCSSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCBSS
T ss_pred ecCCCCCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCc-EEECCCCccccccccEEEECCEEEEECCCCC
Confidence 111111222222222 235554443221 11 24678999988764 665533221111 122345789999865321
Q ss_pred -CCccEEEEEeCCCCCCceE-EecCCCC-ceeeeEEEeCCEEEEEEeeCC---eeEEEEEECCC
Q 009441 352 -LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQLFIDHLAVYEREGG---LQKITTYRLPA 409 (534)
Q Consensus 352 -~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~ 409 (534)
.....+...|+.+ ..| .++.-+. ..-..+...++.|++..-.++ ...++++++.+
T Consensus 216 ~~~~~~~~~yd~~~---~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 216 PLVRKSVEVYDPTT---NAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp SSBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CcccceEEEEeCCC---CCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCC
Confidence 2234678888754 467 4443221 112234556788887754433 24578888774
No 341
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=44.61 E-value=31 Score=31.29 Aligned_cols=45 Identities=20% Similarity=0.132 Sum_probs=32.4
Q ss_pred CCcEEEEEEEEcC--CCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 482 NNYFTERKWASAS--DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 482 ~~~~~e~v~~~S~--DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
..|.++.+.+++. +|.. .+.|.+|... .+++.|+||+.||..+..
T Consensus 21 g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~--~~~~~p~vv~~HG~~~~~ 67 (262)
T 1jfr_A 21 GPYATSQTSVSSLVASGFG-GGTIYYPTST--ADGTFGAVVISPGFTAYQ 67 (262)
T ss_dssp CSSCEEEEEECTTTCSSSC-CEEEEEESCC--TTCCEEEEEEECCTTCCG
T ss_pred CCCCccceEecceeccCCC-ceeEEecCCC--CCCCCCEEEEeCCcCCCc
Confidence 3566777778876 4543 6778888763 356789999999987654
No 342
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=43.99 E-value=29 Score=33.14 Aligned_cols=43 Identities=14% Similarity=0.026 Sum_probs=33.2
Q ss_pred cEEEEEEEEcC-CCceecEEEEEeCCCCC-----CCCCCcEEEEEcCCCC
Q 009441 484 YFTERKWASAS-DGTQIPICIVYRKNLVK-----LDGSDPLLLYGYGSYE 527 (534)
Q Consensus 484 ~~~e~v~~~S~-DG~~VP~~lv~~k~~~~-----~~~~~P~lL~gYGgyg 527 (534)
....++++.|+ -|+++.+.|+.|++. . .+++.|+|.+.||..|
T Consensus 12 G~~~~~~~~S~~l~~~~~~~VyLPp~y-~~~~~~~~~~~PVLYlLhG~~~ 60 (299)
T 4fol_A 12 GRLIKLSHNSNSTKTSMNVNIYLPKHY-YAQDFPRNKRIPTVFYLSGLTC 60 (299)
T ss_dssp EEEEEEEEECTTTSSEEEEEEEECGGG-GCC------CBCEEEEECCTTC
T ss_pred CEEEEEEEECcccCCceEEEEEcCCCC-CccccccCCCcCEEEEECCCCC
Confidence 45677778875 699999999999875 3 3568999999999765
No 343
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=42.42 E-value=2.4e+02 Score=27.07 Aligned_cols=157 Identities=10% Similarity=0.088 Sum_probs=80.8
Q ss_pred ceeEEccCCe-EEEEEECCCCCCceEEEeecCCCCCC---ce-EeeeecCCceEEEEEEcCC---CcEEEEEecCc----
Q 009441 239 ASVEWAGNEA-LVYITMDEILRPDKAWLHKLEADQSN---DI-CLYHEKDDIYSLGLQASES---KKFLFIASESK---- 306 (534)
Q Consensus 239 ~~~~Ws~Dg~-l~Y~~~d~~~r~~~v~~~~lgt~~~~---d~-lv~~e~d~~~~v~~~~S~D---g~~l~i~~~~~---- 306 (534)
..++|.|||. +|.+.. ..+|++.+....... +. .++.. ...-..+++++|| +++|++.....
T Consensus 21 ~~i~~~pdG~~l~V~e~-----~G~i~~~~~~g~~~~~~~~~~~v~~~-g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLR-----GGELRHWQAGKGLSAPLSGVPDVWAH-GQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp EEEEECSTTCCEEEEET-----TTEEEEEETTTEECCCCBSCCCCCCS-TTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred EEEEEcCCCCEEEEEeC-----CceEEEEeCCCceeeEecCCcccccC-CCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3589999996 766542 247887764321100 00 01211 1122457888997 77777764321
Q ss_pred -ceeEEEEEeCCCCC----ceeEeeecc----cc----eeEEEeeeCCEEEEEEcCCC---------CCccEEEEEeCCC
Q 009441 307 -ITRFVFYLDVSKPE----ELRVLTPRV----VG----VDTAASHRGNHFFITRRSDE---------LFNSELLACPVDN 364 (534)
Q Consensus 307 -~~~ev~~~d~~~~~----~~~~l~~~~----~g----~~~~v~~~g~~lyi~tn~~~---------~~~~~L~~~~~~~ 364 (534)
..+.|+.++.+... ..+.+.... .+ ....++++| .||+.+...+ ...++|++++.+.
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 14577777765431 233332211 11 123356655 8988874311 2347999998753
Q ss_pred C-------------CCceEEecCCCCceeeeEEEeC--CEEEEEEee-CCeeEEEEE
Q 009441 365 T-------------SETTVLIPHRESVKLQDIQLFI--DHLAVYERE-GGLQKITTY 405 (534)
Q Consensus 365 ~-------------~~~~~li~~~~~~~l~~~~~~~--~~lv~~~~~-~g~~~l~~~ 405 (534)
. ... +++.. -....++.+.. +.|++.... ++..+|.++
T Consensus 174 ~~p~~npf~~~~~~~~~--i~a~G-~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i 227 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAE--IWSYG-IRNPQGMAMNPWSNALWLNEHGPRGGDEINIP 227 (353)
T ss_dssp CCCTTCTTTTSTTSCTT--EEEEC-CSEEEEEEEETTTTEEEEEEECSBSCEEEECC
T ss_pred CCCCCCCCcCCCCCCcc--EEEEc-CcCccceEEECCCCCEEEEecCCCCCcEEeEe
Confidence 1 011 22222 12466777765 577776543 223455544
No 344
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=42.41 E-value=24 Score=33.08 Aligned_cols=36 Identities=14% Similarity=0.283 Sum_probs=25.4
Q ss_pred EEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCC
Q 009441 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE 527 (534)
Q Consensus 486 ~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg 527 (534)
.+.+.|. |..+++.|++|++. .++.|+||+.|||+.
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~---~~~~p~vv~~HGgg~ 93 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT---TNQAPLFVFVHGGYW 93 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC---CTTCCEEEEECCSTT
T ss_pred eeeeccC---CCCcEEEEEecCCC---CCCCCEEEEECCCcC
Confidence 4455554 55667777778743 467899999999863
No 345
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=42.16 E-value=2.4e+02 Score=27.14 Aligned_cols=153 Identities=8% Similarity=0.024 Sum_probs=82.0
Q ss_pred EEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeeccccCC---------ccceeEE---ccCCeEEEEEECC----C--
Q 009441 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---------VTASVEW---AGNEALVYITMDE----I-- 257 (534)
Q Consensus 196 ~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~---------~~~~~~W---s~Dg~l~Y~~~d~----~-- 257 (534)
++|.+....+.++.-.+| +|..+|.++|......+++ ..+++.| .++|+++.+.... .
T Consensus 18 ~~wd~~~g~~~vs~l~~g----~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYKG----RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp EEEETTTTEEEEEETTTT----EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred ccCcCCCCEEEEEeccCC----EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 578776666666655555 5777888766433222333 1367999 4777776654310 0
Q ss_pred ---CCCceEEEeecC---CCCCCceEeeee----c---------CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC
Q 009441 258 ---LRPDKAWLHKLE---ADQSNDICLYHE----K---------DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (534)
Q Consensus 258 ---~r~~~v~~~~lg---t~~~~d~lv~~e----~---------d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~ 318 (534)
.....|.++++. ++. .+.+-. . ......++.+.++|+--+..+.. ...|+.++.++
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~---~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~--~~~I~rV~pdG 168 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSK---PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG--MPAIARVSADG 168 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCC---CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES--SCEEEEECTTS
T ss_pred cccCCCCEEEEEcCCcCCCCC---EEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC--CCeEEEEeCCC
Confidence 124578899987 442 111111 0 11124578888998753322221 15688888766
Q ss_pred CCceeEee-ec--------ccceeEEEeeeCCEEEEEEcCCCCCccEEEEEeCCCC
Q 009441 319 PEELRVLT-PR--------VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNT 365 (534)
Q Consensus 319 ~~~~~~l~-~~--------~~g~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~ 365 (534)
.. ..... .. -.|+. +.++|..|++ .. . .++|.++|+..+
T Consensus 169 ~~-~~~~~~~~~~~~~~~G~nGIv--~~pdg~~Liv-~~---~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 169 KT-VSTFAWESGNGGQRPGYSGIT--FDPHSNKLIA-FG---G-PRALTAFDVSKP 216 (334)
T ss_dssp CC-EEEEEECCCCSSSCCSCSEEE--EETTTTEEEE-ES---S-SSSEEEEECSSS
T ss_pred CE-EeeeeecCCCcccccCcceEE--EeCCCCEEEE-Ec---C-CCeEEEEcCCCC
Confidence 43 22111 11 11222 3345555544 33 2 478999998754
No 346
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=41.88 E-value=24 Score=32.09 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=25.2
Q ss_pred EEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 488 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 488 ~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
...++-.||..+++.++.|++ ++.|+||+.|||.
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~-----~~~p~vv~~HGgg 73 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG-----TPVGLFVFVHGGY 73 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS-----SCSEEEEEECCST
T ss_pred ccccccCCCCCceEEEEccCC-----CCCCEEEEEcCcc
Confidence 344555688888888877663 4679999999974
No 347
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.80 E-value=1.1e+02 Score=32.14 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=39.3
Q ss_pred ceeEEccCCeEEEEEECCC---------CCCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecC
Q 009441 239 ASVEWAGNEALVYITMDEI---------LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 305 (534)
Q Consensus 239 ~~~~Ws~Dg~l~Y~~~d~~---------~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~ 305 (534)
.++.+.++|.|++.+ |.. .....||+..-.+++ -..+...+...-.-++.+|||++.|+|.+..
T Consensus 479 DnL~fd~~G~LWf~T-D~~~~~~g~~~~~gnn~v~~~dp~tGe--l~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 479 DGLGFDKAGRLWILT-DGDSSNAGDFAGMGNNQMLCADPATGE--IRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEECTTCCEEEEE-CCCCCCSGGGTTCCSCEEEEECTTTCC--EEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CceEECCCCCEEEEe-CCCcCccccccccCCceEEEEeCCCCe--EEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 358888888887755 321 123478887655442 2233332222224478999999999998754
No 348
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=39.61 E-value=2.1e+02 Score=25.70 Aligned_cols=197 Identities=9% Similarity=0.050 Sum_probs=95.9
Q ss_pred EEEEEEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc----C---CccceeEEc-cCCeEEEEEECCCCCCc
Q 009441 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL----V---GVTASVEWA-GNEALVYITMDEILRPD 261 (534)
Q Consensus 191 ~~l~~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i----~---~~~~~~~Ws-~Dg~l~Y~~~d~~~r~~ 261 (534)
.....+.++|||+.++ .+..+ ..|+++|.+ |+.+.. .. . .....+++. ++|.+|.+... ...
T Consensus 30 ~~p~~v~~~~~g~l~v--~~~~~---~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~---~~~ 100 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIV--ADTNN---HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS---PTH 100 (286)
T ss_dssp SCEEEEEECTTCCEEE--EEGGG---TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG---GGC
T ss_pred CCCceEEECCCCCEEE--EECCC---CEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC---CCC
Confidence 3466778999998433 22211 258888887 544321 11 0 112357784 56677665421 123
Q ss_pred eEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeee-cccceeEE--Eee
Q 009441 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTA--ASH 338 (534)
Q Consensus 262 ~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~-~~~g~~~~--v~~ 338 (534)
.|++++.. + +-...+.......-..+.+++||+. ++... ....|++++.++.. ...+.. .....-.. +++
T Consensus 101 ~i~~~d~~-g--~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~--~~~~i~~~~~~g~~-~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 101 QIQIYNQY-G--QFVRKFGATILQHPRGVTVDNKGRI-IVVEC--KVMRVIIFDQNGNV-LHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp EEEEECTT-S--CEEEEECTTTCSCEEEEEECTTSCE-EEEET--TTTEEEEECTTSCE-EEEEECTTTCSSEEEEEECS
T ss_pred EEEEECCC-C--cEEEEecCccCCCceEEEEeCCCCE-EEEEC--CCCEEEEEcCCCCE-EEEeCCCCccCCcEEEEECC
Confidence 67777632 2 1111222111122345778999984 44322 23467888865421 222211 11011122 444
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC-CCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECCCCCCc
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-ESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLPAVGEP 413 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~~g~~ 413 (534)
+ +.+|+... .+.+|.+++... . ....+... ......++.+.. +.|++....++ ..|.+++.+ |+.
T Consensus 174 ~-g~l~v~~~----~~~~i~~~~~~g-~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~-~~i~~~~~~--g~~ 240 (286)
T 1q7f_A 174 K-QEIFISDN----RAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNGEILIADNHNN-FNLTIFTQD--GQL 240 (286)
T ss_dssp S-SEEEEEEG----GGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSS-CEEEEECTT--SCE
T ss_pred C-CCEEEEEC----CCCEEEEEcCCC-C-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCC-EEEEEECCC--CCE
Confidence 3 56766443 235787887643 1 11123221 112466777764 46766654332 267888765 653
No 349
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=39.57 E-value=39 Score=30.97 Aligned_cols=42 Identities=10% Similarity=0.030 Sum_probs=29.9
Q ss_pred cEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCcC
Q 009441 484 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 484 ~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~~ 529 (534)
+..+.+.+++ ||..+.+.......- +++.|+||+.||..+..
T Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~p~vv~~hG~~~~~ 59 (315)
T 4f0j_A 18 YPVHYLDFTS-QGQPLSMAYLDVAPK---KANGRTILLMHGKNFCA 59 (315)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEEECCS---SCCSCEEEEECCTTCCG
T ss_pred ccceeEEEec-CCCCeeEEEeecCCC---CCCCCeEEEEcCCCCcc
Confidence 4567777764 788888876666532 35679999999987654
No 350
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=39.11 E-value=3.8e+02 Score=28.43 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=39.9
Q ss_pred eeCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCC-C----CceeeeEEEeCCEEEEEEeeC---CeeEEEEEECCC
Q 009441 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-E----SVKLQDIQLFIDHLAVYEREG---GLQKITTYRLPA 409 (534)
Q Consensus 338 ~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~-~----~~~l~~~~~~~~~lv~~~~~~---g~~~l~~~~l~~ 409 (534)
..++.+|+.+. +++|+.+|..+++ ..|-+... . ........+.++.+++..... ....|+.+|..+
T Consensus 126 ~~~~~v~v~~~-----dg~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~t 199 (677)
T 1kb0_A 126 LWKGKVYVGAW-----DGRLIALDAATGK-EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAET 199 (677)
T ss_dssp EETTEEEEECT-----TSEEEEEETTTCC-EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred EECCEEEEEcC-----CCEEEEEECCCCC-EEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCC
Confidence 46788888654 2579999987644 45733322 1 111223344567777654321 134688888876
Q ss_pred CCCcc
Q 009441 410 VGEPL 414 (534)
Q Consensus 410 ~g~~~ 414 (534)
|+.+
T Consensus 200 -G~~~ 203 (677)
T 1kb0_A 200 -GERK 203 (677)
T ss_dssp -CCEE
T ss_pred -CcEE
Confidence 7643
No 351
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=38.87 E-value=2.7e+02 Score=26.71 Aligned_cols=77 Identities=13% Similarity=0.060 Sum_probs=41.2
Q ss_pred EEEEEECCC---CCEEEEEEc---CCCCeEEEEEEEECCCC--Ce-----eccccCC----ccceeEEccCCeEEEEEEC
Q 009441 193 VGCFQVSPD---NKLVAYAED---TKGDEIYTVYVIDIETG--TP-----VGKPLVG----VTASVEWAGNEALVYITMD 255 (534)
Q Consensus 193 l~~~~~SPD---G~~LA~~~d---~~G~E~~~l~v~dl~tg--~~-----~~~~i~~----~~~~~~Ws~Dg~l~Y~~~d 255 (534)
+..+.++|| +.+|-++.. .+|.....|..++++.+ .. +-..++. ....++|.|||.||++.-+
T Consensus 75 ~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 75 LLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred eeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 567789998 444433322 22333356777776654 11 1111221 1245999999987666433
Q ss_pred CC---------CCCceEEEeecC
Q 009441 256 EI---------LRPDKAWLHKLE 269 (534)
Q Consensus 256 ~~---------~r~~~v~~~~lg 269 (534)
.. ....+|++.+..
T Consensus 155 ~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 155 AADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp TTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCccccCCCCCCeEEEEEcCC
Confidence 21 112378887763
No 352
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=38.82 E-value=2.2e+02 Score=25.61 Aligned_cols=193 Identities=11% Similarity=0.109 Sum_probs=93.8
Q ss_pred EEEEEEE-CCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-ccC--CccceeEEccCCeEEEEEECCCCCCceEEEee
Q 009441 192 SVGCFQV-SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV--GVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (534)
Q Consensus 192 ~l~~~~~-SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i~--~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~ 267 (534)
....+.+ +++|+.++- +..++ ..|+++| .+|+.+.. ... .....++++++|.+|.+... ..+|++++
T Consensus 78 ~p~~i~~~~~~g~l~v~--~~~~~--~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~~ 148 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVT--ERSPT--HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK----VMRVIIFD 148 (286)
T ss_dssp SEEEEEEETTTTEEEEE--ECGGG--CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT----TTEEEEEC
T ss_pred CceEEEEEcCCCeEEEE--cCCCC--CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECC----CCEEEEEc
Confidence 3556677 577764433 22111 3688888 45655432 111 12345889898876555321 24687777
Q ss_pred cCCCCCCceEeeeec-CCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecc--ccee-EEEeeeCCEE
Q 009441 268 LEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGVD-TAASHRGNHF 343 (534)
Q Consensus 268 lgt~~~~d~lv~~e~-d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~--~g~~-~~v~~~g~~l 343 (534)
... .....+... ....-..+.+++||+. ++.. .....|++++.++.. +..+.... .... ..++++ +.+
T Consensus 149 ~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l-~v~~--~~~~~i~~~~~~g~~-~~~~~~~g~~~~p~~i~~d~~-G~l 220 (286)
T 1q7f_A 149 QNG---NVLHKFGCSKHLEFPNGVVVNDKQEI-FISD--NRAHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSN-GEI 220 (286)
T ss_dssp TTS---CEEEEEECTTTCSSEEEEEECSSSEE-EEEE--GGGTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTT-CCE
T ss_pred CCC---CEEEEeCCCCccCCcEEEEECCCCCE-EEEE--CCCCEEEEEcCCCCE-EEEEccCCccCCCcEEEECCC-CCE
Confidence 432 112223211 1122345788999984 3322 224568888875432 22222110 1111 124444 467
Q ss_pred EEEEcCCCCCccEEEEEeCCCCCCceEEecCCCCceeeeEEEeC-CEEEEEEeeCCeeEEEEEECC
Q 009441 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 344 yi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 408 (534)
|+.... .+.+|...+.+. .....+..........++.+.+ +.|++.. .++ .|.++++.
T Consensus 221 ~v~~~~---~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~~--~v~v~~~~ 279 (286)
T 1q7f_A 221 LIADNH---NNFNLTIFTQDG-QLISALESKVKHAQCFDVALMDDGSVVLAS-KDY--RLYIYRYV 279 (286)
T ss_dssp EEEECS---SSCEEEEECTTS-CEEEEEEESSCCSCEEEEEEETTTEEEEEE-TTT--EEEEEECS
T ss_pred EEEeCC---CCEEEEEECCCC-CEEEEEcccCCCCcceeEEECCCCcEEEEC-CCC--eEEEEEcc
Confidence 665542 123677777532 1111122222222355677765 4777763 343 56666665
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=37.46 E-value=2.5e+02 Score=25.97 Aligned_cols=98 Identities=4% Similarity=0.027 Sum_probs=56.0
Q ss_pred eeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCC--CCCccEEEEEeCCCCCCceE-EecCCCC-ceeee
Q 009441 308 TRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSD--ELFNSELLACPVDNTSETTV-LIPHRES-VKLQD 382 (534)
Q Consensus 308 ~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~--~~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~ 382 (534)
.+++++.|..+.. |..+.+...... ......++.+|+..... ......+...|+.+ ..| .++.-+. ..-..
T Consensus 126 ~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~ 201 (318)
T 2woz_A 126 LDSVLCYDPVAAK-WSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKK---GDWKDLAPMKTPRSMFG 201 (318)
T ss_dssp EEEEEEEETTTTE-EEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTT---TEEEEECCCSSCCBSCE
T ss_pred cceEEEEeCCCCC-EeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCC---CEEEECCCCCCCcccce
Confidence 4689999988764 665543221111 11223578899886431 22345688888754 468 4443221 12234
Q ss_pred EEEeCCEEEEEEeeCC---eeEEEEEECCC
Q 009441 383 IQLFIDHLAVYEREGG---LQKITTYRLPA 409 (534)
Q Consensus 383 ~~~~~~~lv~~~~~~g---~~~l~~~~l~~ 409 (534)
+...++.|++..-.++ ...++++++.+
T Consensus 202 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 202 VAIHKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred EEEECCEEEEEcCcCCCCccceEEEEECCC
Confidence 4556888888754322 24688899875
No 354
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=36.51 E-value=3.4e+02 Score=28.86 Aligned_cols=112 Identities=5% Similarity=0.005 Sum_probs=59.1
Q ss_pred CCCcEEEEEec-CcceeEEEEEeCCCCCceeEee-e-----cccce-eEEEeee--CCEEEEEEcCCCC--CccEEEEEe
Q 009441 294 ESKKFLFIASE-SKITRFVFYLDVSKPEELRVLT-P-----RVVGV-DTAASHR--GNHFFITRRSDEL--FNSELLACP 361 (534)
Q Consensus 294 ~Dg~~l~i~~~-~~~~~ev~~~d~~~~~~~~~l~-~-----~~~g~-~~~v~~~--g~~lyi~tn~~~~--~~~~L~~~~ 361 (534)
-+++.+++.-. ....+++++.+..+.. |..+. + ..... ....... ++.+|++....+. ....+...|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~-W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDK-IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSC-EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCe-EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 45554333321 1234678999987765 66554 3 11111 1222334 7889998754211 234577777
Q ss_pred CCCCCCceE-EecCCCC-ceeeeEEEe-CCEEEEEEeeCCeeEEEEEECCC
Q 009441 362 VDNTSETTV-LIPHRES-VKLQDIQLF-IDHLAVYEREGGLQKITTYRLPA 409 (534)
Q Consensus 362 ~~~~~~~~~-li~~~~~-~~l~~~~~~-~~~lv~~~~~~g~~~l~~~~l~~ 409 (534)
..+ ..| .++.-+. ..-..+... ++.||+..-.++...+++++..+
T Consensus 475 ~~t---~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 475 MKT---REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp TTT---TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred CCC---CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 654 467 3333221 111233343 77888876544433788998875
No 355
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=36.09 E-value=2.6e+02 Score=25.75 Aligned_cols=184 Identities=10% Similarity=0.009 Sum_probs=89.1
Q ss_pred EEEEEECCCCCeecc-cc--CCccceeEEccCCeEEEEE-ECCCCCCceEEEeecCCCCCCceEeeeecCCceEEEEEEc
Q 009441 218 TVYVIDIETGTPVGK-PL--VGVTASVEWAGNEALVYIT-MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQAS 293 (534)
Q Consensus 218 ~l~v~dl~tg~~~~~-~i--~~~~~~~~Ws~Dg~l~Y~~-~d~~~r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S 293 (534)
.++++|+.+++.... .+ +.....++- -++.+|... .+.......++++++.+..-. .+-.-+.+........
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~--~~~~~p~~r~~~~~~~- 166 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWH--LVAPMLTRRIGVGVAV- 166 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEE--ECCCCSSCCBSCEEEE-
T ss_pred eEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEe--ECCCCCccccceEEEE-
Confidence 588999988864332 12 222222222 255665553 122122346777777654210 0101111222212221
Q ss_pred CCCcEEEEEecC--cceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCCC-CCccEEEEEeCCCCCCce
Q 009441 294 ESKKFLFIASES--KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDE-LFNSELLACPVDNTSETT 369 (534)
Q Consensus 294 ~Dg~~l~i~~~~--~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~~-~~~~~L~~~~~~~~~~~~ 369 (534)
-+++..++.-.+ ...++++..|..+.. |..+.+...... ......++.+|++....+ .....+...|+.+ ..
T Consensus 167 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~---~~ 242 (308)
T 1zgk_A 167 LNRLLYAVGGFDGTNRLNSAECYYPERNE-WRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET---ET 242 (308)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT---TE
T ss_pred ECCEEEEEeCCCCCCcCceEEEEeCCCCe-EeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCC---Cc
Confidence 245444443222 224678999987764 655433211111 122234788998875321 1235678888754 46
Q ss_pred E-EecCCCC-ceeeeEEEeCCEEEEEEeeCC---eeEEEEEECCC
Q 009441 370 V-LIPHRES-VKLQDIQLFIDHLAVYEREGG---LQKITTYRLPA 409 (534)
Q Consensus 370 ~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~ 409 (534)
| .++.-+. ..-..+.+.++.|++..-.++ ...++++++.+
T Consensus 243 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 243 WTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred EEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 8 4433221 112244456788887754332 34678888774
No 356
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=36.07 E-value=2.6e+02 Score=25.78 Aligned_cols=99 Identities=7% Similarity=-0.032 Sum_probs=57.6
Q ss_pred ceeEEEEEeCCCCCceeEeeeccccee-EEEeeeCCEEEEEEcCC--CCCccEEEEEeCCCCCCceE-EecCCCC-ceee
Q 009441 307 ITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSD--ELFNSELLACPVDNTSETTV-LIPHRES-VKLQ 381 (534)
Q Consensus 307 ~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g~~lyi~tn~~--~~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~ 381 (534)
..++++..|..+.. |+.+.+...... ......++.+|+..... ......+.+.|..+ ..| .++.-+. ..-.
T Consensus 115 ~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~ 190 (315)
T 4asc_A 115 CLDSVMCYDRLSFK-WGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK---FEWKELAPMQTARSLF 190 (315)
T ss_dssp BCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT---TEEEECCCCSSCCBSC
T ss_pred ccceEEEECCCCCc-EeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC---CeEEECCCCCCchhce
Confidence 34689999988764 665543221111 12234578899887541 22345677887654 467 4443221 1223
Q ss_pred eEEEeCCEEEEEEeeCC---eeEEEEEECCC
Q 009441 382 DIQLFIDHLAVYEREGG---LQKITTYRLPA 409 (534)
Q Consensus 382 ~~~~~~~~lv~~~~~~g---~~~l~~~~l~~ 409 (534)
.+...++.|++..-.++ ...++++++.+
T Consensus 191 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 191 GATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred EEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 45556889988765443 34788898875
No 357
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=35.41 E-value=2.6e+02 Score=25.59 Aligned_cols=109 Identities=12% Similarity=0.145 Sum_probs=57.7
Q ss_pred EEEEcCCCcEEEEEecCcceeEEEEEeCCCCCceeEeeecccceeEE-EeeeCCEEEEEEcCCCCCccEEEEEeCCCCCC
Q 009441 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (534)
Q Consensus 289 ~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~~~~~l~~~~~g~~~~-v~~~g~~lyi~tn~~~~~~~~L~~~~~~~~~~ 367 (534)
++++.+|++.|++..++ ...|+.+++. +.-++.+ +-.....+. +...++..|+++.+ .. .+|+.+++.....
T Consensus 31 Gla~~~~~~~L~aV~d~--~~~I~~ld~~-g~v~~~i-~l~g~~D~EGIa~~~~g~~~vs~E-~~--~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 31 SLTWSAQSNTLFSTINK--PAAIVEMTTN-GDLIRTI-PLDFVKDLETIEYIGDNQFVISDE-RD--YAIYVISLTPNSE 103 (255)
T ss_dssp EEEEETTTTEEEEEEET--TEEEEEEETT-CCEEEEE-ECSSCSSEEEEEECSTTEEEEEET-TT--TEEEEEEECTTCC
T ss_pred eeEEeCCCCEEEEEECC--CCeEEEEeCC-CCEEEEE-ecCCCCChHHeEEeCCCEEEEEEC-CC--CcEEEEEcCCCCe
Confidence 57788888887765554 5679999998 3312222 111001222 33334334555554 22 5677766643321
Q ss_pred ceE---Ee--c---CCCCceeeeEEEeC--CEEEEEEeeCCeeEEEEEE
Q 009441 368 TTV---LI--P---HRESVKLQDIQLFI--DHLAVYEREGGLQKITTYR 406 (534)
Q Consensus 368 ~~~---li--~---~~~~~~l~~~~~~~--~~lv~~~~~~g~~~l~~~~ 406 (534)
-+ .+ + ......++++.+.. +.|++... .....|+.++
T Consensus 104 -i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E-~~p~~i~~~~ 150 (255)
T 3qqz_A 104 -VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE-KNPIEVYKVN 150 (255)
T ss_dssp -EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE-SSSEEEEEEE
T ss_pred -eeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC-cCCceEEEEc
Confidence 11 11 1 12234479999975 47777543 3334677776
No 358
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=35.38 E-value=22 Score=37.19 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=22.1
Q ss_pred cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 493 S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
|.|...+ .|..|++. ..+++.|+|||+|||-
T Consensus 94 sedcl~l--~v~~P~~~-~~~~~~Pv~v~iHGGg 124 (534)
T 1llf_A 94 SEDCLTI--NVVRPPGT-KAGANLPVMLWIFGGG 124 (534)
T ss_dssp CSCCCEE--EEEECTTC-CTTCCEEEEEEECCST
T ss_pred CCCCeEE--EEEECCCC-CCCCCceEEEEEeCCC
Confidence 5566554 55677765 4556889999999984
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.07 E-value=95 Score=32.74 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=44.7
Q ss_pred CcEEEEEEEECCCCCEEEEEEcCCCC--------eEEEEEEEECCCCCeecc-ccC-Cc-cceeEEccCC-eEEEEEEC
Q 009441 189 GFYSVGCFQVSPDNKLVAYAEDTKGD--------EIYTVYVIDIETGTPVGK-PLV-GV-TASVEWAGNE-ALVYITMD 255 (534)
Q Consensus 189 ~~~~l~~~~~SPDG~~LA~~~d~~G~--------E~~~l~v~dl~tg~~~~~-~i~-~~-~~~~~Ws~Dg-~l~Y~~~d 255 (534)
.+-....+.++|+|+ |.+..|.+++ -..++.+.+..+|+..+. ..+ +. ..+++|+||+ .+|..-..
T Consensus 474 ~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 474 MFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEEC
Confidence 355678899999998 6666775421 235678888888986542 222 22 4569999999 77666553
No 360
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=34.44 E-value=3.3e+02 Score=26.44 Aligned_cols=155 Identities=15% Similarity=0.168 Sum_probs=0.0
Q ss_pred CCCE--EEEEEcCC-CCeEEEEEEEECCCCCeecc-----ccC---CccceeEE--ccCC-eEEEEEECCCCCCceEEEe
Q 009441 201 DNKL--VAYAEDTK-GDEIYTVYVIDIETGTPVGK-----PLV---GVTASVEW--AGNE-ALVYITMDEILRPDKAWLH 266 (534)
Q Consensus 201 DG~~--LA~~~d~~-G~E~~~l~v~dl~tg~~~~~-----~i~---~~~~~~~W--s~Dg-~l~Y~~~d~~~r~~~v~~~ 266 (534)
.|+. |||+.+++ |+....++-+|.++++.... ++. ....+++. ++++ .+|-...++..+-.+.-..
T Consensus 82 ~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 82 NGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp TTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred CCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Q ss_pred ecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCC-----CCC-----ceeEeeecccceeEEE
Q 009441 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS-----KPE-----ELRVLTPRVVGVDTAA 336 (534)
Q Consensus 267 ~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~-----~~~-----~~~~l~~~~~g~~~~v 336 (534)
.-+.+....++|-+-.-+.-.-.....+...+|++...... ||.++.+ .+. ....+....+|...+-
T Consensus 162 ~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G---Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~ 238 (355)
T 3amr_A 162 ADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA---IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYY 238 (355)
T ss_dssp ECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE---EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEE
T ss_pred eCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce---EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEe
Q ss_pred eeeCCEEEEEEcCCCCCccEEEE
Q 009441 337 SHRGNHFFITRRSDELFNSELLA 359 (534)
Q Consensus 337 ~~~g~~lyi~tn~~~~~~~~L~~ 359 (534)
.+++...+++++. +...+-++.
T Consensus 239 ~~~g~gyLivSsQ-G~~s~~Vyd 260 (355)
T 3amr_A 239 AADGKGYLMASSQ-GNSSYAIYD 260 (355)
T ss_dssp CGGGCEEEEEEEG-GGTEEEEEE
T ss_pred cCCCCEEEEEEcC-CCCEEEEEE
No 361
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=33.68 E-value=25 Score=36.84 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=22.4
Q ss_pred cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 493 S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
|.|...+ .|..|++. ..+++.|+|||+|||-
T Consensus 102 sedcl~l--~v~~P~~~-~~~~~~Pviv~iHGGg 132 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGT-KPDAKLPVMVWIYGGA 132 (544)
T ss_dssp CSCCCEE--EEEEETTC-CTTCCEEEEEEECCCT
T ss_pred CCCCeEE--EEEeCCCC-CCCCCCcEEEEECCCc
Confidence 5666654 45577765 4567889999999984
No 362
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=33.58 E-value=25 Score=36.55 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=22.4
Q ss_pred cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 493 S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
|.|... +.|..|++. ..+++.|+|||+|||-
T Consensus 82 ~edcl~--l~v~~P~~~-~~~~~~Pviv~iHGGg 112 (522)
T 1ukc_A 82 SEDCLF--INVFKPSTA-TSQSKLPVWLFIQGGG 112 (522)
T ss_dssp ESCCCE--EEEEEETTC-CTTCCEEEEEEECCST
T ss_pred CCcCCE--EEEEECCCC-CCCCCCCEEEEECCCc
Confidence 566654 455677765 4556789999999984
No 363
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=33.09 E-value=24 Score=34.33 Aligned_cols=39 Identities=13% Similarity=-0.007 Sum_probs=29.4
Q ss_pred EEEcCCCceecEEEEEeCC---CCCCCCCCcEEEEEcCCCCcC
Q 009441 490 WASASDGTQIPICIVYRKN---LVKLDGSDPLLLYGYGSYEVI 529 (534)
Q Consensus 490 ~~~S~DG~~VP~~lv~~k~---~~~~~~~~P~lL~gYGgyg~~ 529 (534)
.+.+.||.+|.+.+..+.+ . ...++.|+||+.||..+..
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~-~~~~~~~~vvllHG~~~~~ 65 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRR-SRTATRLNLVFLHGSGMSK 65 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTC-CTTCEEEEEEEECCTTCCG
T ss_pred cccCCCceEEEEEEEecCCCCCC-CCCCCCCeEEEEcCCCCcH
Confidence 3567899999999888875 2 2345568999999977654
No 364
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=33.07 E-value=23 Score=34.32 Aligned_cols=42 Identities=10% Similarity=-0.064 Sum_probs=33.2
Q ss_pred cEEEEEEEEcC-CCceecEEEEEeCCCCCC-CCCCcEEEEEcCCC
Q 009441 484 YFTERKWASAS-DGTQIPICIVYRKNLVKL-DGSDPLLLYGYGSY 526 (534)
Q Consensus 484 ~~~e~v~~~S~-DG~~VP~~lv~~k~~~~~-~~~~P~lL~gYGgy 526 (534)
..++.+.+.|+ -|.+..++|+.|++. .. ++++|+|...||..
T Consensus 10 ~~v~~~~~~S~~l~~~r~~~VylP~~y-~~~~~~yPVlylldG~~ 53 (331)
T 3gff_A 10 VEYQSKRLESRLLKETREYVIALPEGY-AQSLEAYPVVYLLDGED 53 (331)
T ss_dssp -CEEEEEEEETTTTEEEEEEEECCTTG-GGSCCCEEEEEESSHHH
T ss_pred ceEEEEEEEecCCCCeEEEEEEeCCCC-CCCCCCccEEEEecChh
Confidence 34566667776 589999999999998 65 67899999998864
No 365
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=30.76 E-value=29 Score=36.26 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=23.0
Q ss_pred cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 493 S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
|.|+..+- |..|++. ..+++.|+||++|||.
T Consensus 95 ~edcl~ln--v~~P~~~-~~~~~~Pv~v~iHGG~ 125 (542)
T 2h7c_A 95 SEDCLYLN--IYTPADL-TKKNRLPVMVWIHGGG 125 (542)
T ss_dssp ESCCCEEE--EEECSCT-TSCCCEEEEEEECCST
T ss_pred CCCCcEEE--EEECCCC-CCCCCCCEEEEECCCc
Confidence 56776654 5677766 4457899999999985
No 366
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=29.18 E-value=36 Score=33.90 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=23.1
Q ss_pred ceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 497 ~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
..|.++++.|++- ++.|+||++||+.+.
T Consensus 143 ~~l~~~l~~P~~~----~~~P~Vv~~hG~~~~ 170 (422)
T 3k2i_A 143 GRVRATLFLPPGP----GPFPGIIDIFGIGGG 170 (422)
T ss_dssp TTEEEEEEECSSS----CCBCEEEEECCTTCS
T ss_pred CcEEEEEEcCCCC----CCcCEEEEEcCCCcc
Confidence 3789999998864 578999999998664
No 367
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=28.74 E-value=37 Score=34.22 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=23.7
Q ss_pred CCceecEEEEEeCCCCCCCCCCcEEEEEcCCCCc
Q 009441 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEV 528 (534)
Q Consensus 495 DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgyg~ 528 (534)
+| .|+++++.|++- ++.|+||+.||+.+.
T Consensus 158 ~g-~l~~~l~~P~~~----~~~P~Vv~lhG~~~~ 186 (446)
T 3hlk_A 158 VG-RVRGTLFLPPEP----GPFPGIVDMFGTGGG 186 (446)
T ss_dssp ET-TEEEEEEECSSS----CCBCEEEEECCSSCS
T ss_pred CC-eEEEEEEeCCCC----CCCCEEEEECCCCcc
Confidence 44 799999998753 578999999999774
No 368
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=28.40 E-value=4.1e+02 Score=25.65 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=57.3
Q ss_pred eeEEcc--CC-eEEEEEECCC-CCCceEEEeecCCCCCCceEeeeecCCce--EEEEEEcCCCcEEEEEec---C-----
Q 009441 240 SVEWAG--NE-ALVYITMDEI-LRPDKAWLHKLEADQSNDICLYHEKDDIY--SLGLQASESKKFLFIASE---S----- 305 (534)
Q Consensus 240 ~~~Ws~--Dg-~l~Y~~~d~~-~r~~~v~~~~lgt~~~~d~lv~~e~d~~~--~v~~~~S~Dg~~l~i~~~---~----- 305 (534)
++...+ || ..+|+.+... ...-.+++++.++. .-+++-.-.++.+ .-++.+.++|++.+-+.. .
T Consensus 116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 355433 55 4455554332 22235777776543 1222212112222 225677889986543221 0
Q ss_pred ------cceeEEEEEeCCCCCceeEeeec---ccceeEEEeeeCCEEEEEEcCCCCCccEEEEEeCC
Q 009441 306 ------KITRFVFYLDVSKPEELRVLTPR---VVGVDTAASHRGNHFFITRRSDELFNSELLACPVD 363 (534)
Q Consensus 306 ------~~~~ev~~~d~~~~~~~~~l~~~---~~g~~~~v~~~g~~lyi~tn~~~~~~~~L~~~~~~ 363 (534)
.....||.++.. + .+.+... .+| ..++++++.+|+.-.. ..+|.+.+++
T Consensus 194 ~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNG--ia~spDg~~lYvadt~----~~~I~~~~~~ 251 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANG--INISPDGKYVYIAELL----AHKIHVYEKH 251 (355)
T ss_dssp HHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEE--EEECTTSSEEEEEEGG----GTEEEEEEEC
T ss_pred chhhccCCccEEEEEECC--e-EEEeecCCcccCc--ceECCCCCEEEEEeCC----CCeEEEEEEC
Confidence 123578888763 2 4444332 122 2367888899886542 3578888775
No 369
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.62 E-value=4.2e+02 Score=25.55 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=64.4
Q ss_pred CCCCEEEEEEcCC-CCeEEEEEEEECCCCCeec-cccCC----ccceeEEccCCeEEEEEEC---C----------CCCC
Q 009441 200 PDNKLVAYAEDTK-GDEIYTVYVIDIETGTPVG-KPLVG----VTASVEWAGNEALVYITMD---E----------ILRP 260 (534)
Q Consensus 200 PDG~~LA~~~d~~-G~E~~~l~v~dl~tg~~~~-~~i~~----~~~~~~Ws~Dg~l~Y~~~d---~----------~~r~ 260 (534)
.||+.-.|.++.. +.....|+-+|.+++.... ..+++ ....+...++|+||.+..- + ....
T Consensus 123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCc
Confidence 4787667777664 4556677777776554321 12222 2345788888887666421 1 1123
Q ss_pred ceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCC
Q 009441 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (534)
Q Consensus 261 ~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~ 318 (534)
..||+++-+ +-+.+.+.- .+--++++|||++++++.... ...|+..+++.
T Consensus 203 g~vyr~d~~----~~~~~~~~l--~~pNGia~spDg~~lYvadt~--~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSPN----DVRVVAEGF--DFANGINISPDGKYVYIAELL--AHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTT----CCEEEEEEE--SSEEEEEECTTSSEEEEEEGG--GTEEEEEEECT
T ss_pred cEEEEEECC----eEEEeecCC--cccCcceECCCCCEEEEEeCC--CCeEEEEEECC
Confidence 478888764 123343321 123368999999999875433 34677777653
No 370
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=25.30 E-value=4.8e+02 Score=25.36 Aligned_cols=198 Identities=14% Similarity=0.211 Sum_probs=107.8
Q ss_pred EEEECCCCCEEEEEEcCCCCeEEEEEEEECCCCCeecc-cc-CCccceeEEccCCeEEEEEECCCCCCceEEEeecCCCC
Q 009441 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (534)
Q Consensus 195 ~~~~SPDG~~LA~~~d~~G~E~~~l~v~dl~tg~~~~~-~i-~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~v~~~~lgt~~ 272 (534)
+.-..|..+-||.-. | .+|.|+|+++.+.+.. .. +.+. .-.|..+..+..++ ...||.|.+...
T Consensus 71 sAIMnP~~~ViALra---g---~~LQiFnletK~klks~~~~e~Vv-fWkWis~~~L~lVT------~taVyHWs~~~~- 136 (365)
T 2xzh_A 71 SAIMNPASKVIALKA---G---KTLQIFNIEMKSKMKAHTMTDDVT-FWKWISLNTVALVT------DNAVYHWSMEGE- 136 (365)
T ss_dssp EEEECSSSSEEEEEE---T---TEEEEEETTTTEEEEEEECSSCEE-EEEECSSSEEEEEE------SSEEEEEESSTT-
T ss_pred eeeeCCCccEEEEec---C---CeEEEechHHhhhhcceecCCccE-EEEecCCCeEEEEc------CCcEEEEcccCC-
Confidence 345688889888864 3 4799999999876643 22 3332 25787777787777 247999998653
Q ss_pred CCceEeeeec---CCceEEEEEEcCCCcEEEEEecCcce----eEEEEEeCCCCCceeEeeecccceeEEEeeeC----C
Q 009441 273 SNDICLYHEK---DDIYSLGLQASESKKFLFIASESKIT----RFVFYLDVSKPEELRVLTPRVVGVDTAASHRG----N 341 (534)
Q Consensus 273 ~~d~lv~~e~---d~~~~v~~~~S~Dg~~l~i~~~~~~~----~ev~~~d~~~~~~~~~l~~~~~g~~~~v~~~g----~ 341 (534)
+..+.+|+.. ...-.++...++|.+|+++..-+... ..+=+...+. +.....+.-.+.-..+-..| .
T Consensus 137 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~ 214 (365)
T 2xzh_A 137 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEES 214 (365)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCE
T ss_pred CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCc
Confidence 4567888753 12224466789999999876532211 1122222222 12222222111111121122 2
Q ss_pred EEEEEEcCCCCCccEEEEEeCCCC--C---C-ceE---EecCC-CCceeeeEEEeCC-EEEEEEeeCCeeEEEEEECCCC
Q 009441 342 HFFITRRSDELFNSELLACPVDNT--S---E-TTV---LIPHR-ESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAV 410 (534)
Q Consensus 342 ~lyi~tn~~~~~~~~L~~~~~~~~--~---~-~~~---li~~~-~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~~l~~~ 410 (534)
.|+....+ +....+|..++++.+ + . .+. .+|++ .+-..-.+.+..+ .+++...+.| -|++||+.+
T Consensus 215 ~lf~fa~r-~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G--~ihlyDleT- 290 (365)
T 2xzh_A 215 TLFCFAVR-GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG--YIHLYDLET- 290 (365)
T ss_dssp EEEEEEEE-ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTS--EEEEEETTT-
T ss_pred eEEEEEEe-cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCc--EEEEEEccc-
Confidence 34444443 233468888887543 1 1 111 23432 1223456666654 3555555567 477788886
Q ss_pred CC
Q 009441 411 GE 412 (534)
Q Consensus 411 g~ 412 (534)
|.
T Consensus 291 gt 292 (365)
T 2xzh_A 291 GT 292 (365)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 371
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=24.53 E-value=6.3e+02 Score=26.57 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=61.4
Q ss_pred eCCEEEEEEcCCCCCccEEEEEeCCCCCCceEEecCCCC----------ceeeeEEEeCCEEEEEEeeCCeeEEEEEECC
Q 009441 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES----------VKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (534)
Q Consensus 339 ~g~~lyi~tn~~~~~~~~L~~~~~~~~~~~~~li~~~~~----------~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 408 (534)
.++.+|+.+.. ..|+.+|.++++ ..|-...... ..-..+.+.++.||+... +| +|+.+|..
T Consensus 65 ~~g~vyv~~~~-----~~v~AlD~~tG~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg--~l~alD~~ 135 (668)
T 1kv9_A 65 HDGVIYTSMSW-----SRVIAVDAASGK-ELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-DG--RLIALDAK 135 (668)
T ss_dssp ETTEEEEEEGG-----GEEEEEETTTCC-EEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-TS--EEEEEETT
T ss_pred ECCEEEEECCC-----CeEEEEECCCCh-hceEECCCCCccccccccccCCccceEEECCEEEEEcC-CC--EEEEEECC
Confidence 57888887752 578888887643 4573322111 001234556677776542 33 68888887
Q ss_pred CCCCcccccCCCceeeecC--ceeeEeCCCCccCccEEEEEecc--CCCCCeEEEEECCCCcEEEEE
Q 009441 409 AVGEPLKSLQGGKSVEFID--PVYSIDPSESVFSSRILRFHYSS--LRTPPSVYDYDMDMGISVLKK 471 (534)
Q Consensus 409 ~~g~~~~~~~~~~~i~lp~--~~~~i~~~~~~~~~~~l~~~~sS--~~~P~~~y~~d~~~~~~~~~~ 471 (534)
+ |+.+.. ..... ..+.+.. .....++.+++..++ +...+.++.+|.++|+.....
T Consensus 136 t-G~~~W~------~~~~~~~~~~~~~~-~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 136 T-GKAIWS------QQTTDPAKPYSITG-APRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp T-CCEEEE------EECSCTTSSCBCCS-CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred C-CCEeee------eccCCCCCcceecC-CCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 6 774321 11111 0111111 111123455554433 224578999999999865433
No 372
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=24.18 E-value=5.4e+02 Score=26.85 Aligned_cols=125 Identities=12% Similarity=0.026 Sum_probs=0.0
Q ss_pred EEEECC-CCCEEEEEEcCCCC------eEEEEEEEECCCCCeecc-----ccCCccceeEEccCCeEEEEEECCCCCCce
Q 009441 195 CFQVSP-DNKLVAYAEDTKGD------EIYTVYVIDIETGTPVGK-----PLVGVTASVEWAGNEALVYITMDEILRPDK 262 (534)
Q Consensus 195 ~~~~SP-DG~~LA~~~d~~G~------E~~~l~v~dl~tg~~~~~-----~i~~~~~~~~Ws~Dg~l~Y~~~d~~~r~~~ 262 (534)
...+.| +|+.++++-..... ....++++|+.+++.... .........+...||.+|...-.... .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~---~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK---K 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT---C
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC---c
Q ss_pred EEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEe---cCcceeEEEEEeCCCCCceeEe
Q 009441 263 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIAS---ESKITRFVFYLDVSKPEELRVL 325 (534)
Q Consensus 263 v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~---~~~~~~ev~~~d~~~~~~~~~l 325 (534)
+++++..+. .=..+-.-+.+.+.......+||+.+++.- .....+.+++.|..+.. |..+
T Consensus 267 v~~yd~~t~--~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~-W~~~ 329 (656)
T 1k3i_A 267 TSLYDSSSD--SWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT-WTSL 329 (656)
T ss_dssp EEEEEGGGT--EEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE-EEEE
T ss_pred eEEecCcCC--ceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc-ceeC
No 373
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=23.59 E-value=52 Score=34.27 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=21.7
Q ss_pred cCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 493 S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
|.|+..+-++ .|++. .+++.|+||++|||-
T Consensus 93 ~edcl~l~v~--~P~~~--~~~~~Pviv~iHGGg 122 (543)
T 2ha2_A 93 SEDCLYLNVW--TPYPR--PASPTPVLIWIYGGG 122 (543)
T ss_dssp ESCCCEEEEE--EESSC--CSSCEEEEEEECCST
T ss_pred CCcCCeEEEe--ecCCC--CCCCCeEEEEECCCc
Confidence 6788776554 56653 345789999999985
No 374
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=23.41 E-value=4.3e+02 Score=24.21 Aligned_cols=204 Identities=13% Similarity=0.026 Sum_probs=101.6
Q ss_pred ECCCCCEEEEEEc-----CCCCe-EEEEEEEECCCCCeecc-ccC--CccceeEEccCCeEEEEE-EC---CCCCCceEE
Q 009441 198 VSPDNKLVAYAED-----TKGDE-IYTVYVIDIETGTPVGK-PLV--GVTASVEWAGNEALVYIT-MD---EILRPDKAW 264 (534)
Q Consensus 198 ~SPDG~~LA~~~d-----~~G~E-~~~l~v~dl~tg~~~~~-~i~--~~~~~~~Ws~Dg~l~Y~~-~d---~~~r~~~v~ 264 (534)
...+++.++++-- ..... ...++++|+.+++.... .++ .....++-. ++.+|... .+ .......++
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEE
Confidence 3457777777642 11122 34599999998865331 222 122222222 44565553 11 122335788
Q ss_pred EeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEec-C--cceeEEEEEeCCCCCceeEeeeccccee-EEEeeeC
Q 009441 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASE-S--KITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRG 340 (534)
Q Consensus 265 ~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~-~--~~~~ev~~~d~~~~~~~~~l~~~~~g~~-~~v~~~g 340 (534)
++++.+..-. .+-.-+.+....... .-+++..++.-. . ...++++..|..+.. |..+.+...... ......+
T Consensus 121 ~~d~~~~~W~--~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~ 196 (315)
T 4asc_A 121 CYDRLSFKWG--ESDPLPYVVYGHTVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVHD 196 (315)
T ss_dssp EEETTTTEEE--ECCCCSSCCBSCEEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEET
T ss_pred EECCCCCcEe--ECCCCCCcccceeEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCe-EEECCCCCCchhceEEEEEC
Confidence 8887654210 110111222222222 245554343322 1 224689999988764 665543222211 1223447
Q ss_pred CEEEEEEcCCC-CCccEEEEEeCCCCCCceE-EecCCCC-ceeeeEEEeCCEEEEEEeeCC------------eeEEEEE
Q 009441 341 NHFFITRRSDE-LFNSELLACPVDNTSETTV-LIPHRES-VKLQDIQLFIDHLAVYEREGG------------LQKITTY 405 (534)
Q Consensus 341 ~~lyi~tn~~~-~~~~~L~~~~~~~~~~~~~-li~~~~~-~~l~~~~~~~~~lv~~~~~~g------------~~~l~~~ 405 (534)
+.+|++....+ .....+...|+.+ ..| .++.-+. ..-..+...++.|++..-.++ ...++++
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITD---NKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCC---CeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEe
Confidence 89999876421 1234677777654 468 4443221 122344556888888764422 2457888
Q ss_pred ECCC
Q 009441 406 RLPA 409 (534)
Q Consensus 406 ~l~~ 409 (534)
++.+
T Consensus 274 d~~~ 277 (315)
T 4asc_A 274 NEEE 277 (315)
T ss_dssp ETTT
T ss_pred cCCC
Confidence 8774
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=22.68 E-value=3.3e+02 Score=28.57 Aligned_cols=64 Identities=11% Similarity=0.021 Sum_probs=38.2
Q ss_pred ceeEEccCCeEEEEEECCCC---------CCceEEEeecCCCCCCceEeeeecCCceEEEEEEcCCCcEEEEEecC
Q 009441 239 ASVEWAGNEALVYITMDEIL---------RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 305 (534)
Q Consensus 239 ~~~~Ws~Dg~l~Y~~~d~~~---------r~~~v~~~~lgt~~~~d~lv~~e~d~~~~v~~~~S~Dg~~l~i~~~~ 305 (534)
.+++++++|.|+. ..|... ..+.++.....+++ -..++..+...-..++.+|||++.|++++..
T Consensus 479 DNL~fd~~G~LwI-~eDg~~~~~~~~~~~gnn~~~~~~~~~g~--~~rf~~~P~gaE~TG~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 479 DGLGFDKAGRLWI-LTDGDSSNAGDFAGMGNNQMLCADPATGE--IRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEECTTCCEEE-EECCCCCCSGGGTTTCSCEEEEECTTTCC--EEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred cceEECCCCCEEE-EecCCCcccccccccccceEEEEeCCCCe--EEEEEeCCCCccCcCeeECCCCCEEEEEEEC
Confidence 4688888887544 445321 12456666554442 2223333333345678999999999998754
No 376
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=21.69 E-value=92 Score=29.36 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=21.1
Q ss_pred CCcEEEEEEEEcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 482 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 482 ~~~~~e~v~~~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
.....+.+.+ ||+.+ ++|++- ....|+||+.|||-
T Consensus 56 ~~~~~~~~~~---~g~~~----~~p~~~---~~~~~~vv~~HGgg 90 (322)
T 3k6k_A 56 EGVELTLTDL---GGVPC----IRQATD---GAGAAHILYFHGGG 90 (322)
T ss_dssp TTCEEEEEEE---TTEEE----EEEECT---TCCSCEEEEECCST
T ss_pred CCceEEEEEE---CCEeE----EecCCC---CCCCeEEEEEcCCc
Confidence 3455555554 78665 466653 12334499999974
No 377
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=21.23 E-value=1.7e+02 Score=22.33 Aligned_cols=53 Identities=8% Similarity=0.081 Sum_probs=36.2
Q ss_pred ccCccEEEEEeccC---CCCCeEEEEECCCCcEEEEEEccccCCCCCCCcEEEEEEEEcCCCc
Q 009441 438 VFSSRILRFHYSSL---RTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGT 497 (534)
Q Consensus 438 ~~~~~~l~~~~sS~---~~P~~~y~~d~~~~~~~~~~~~~~~~~~d~~~~~~e~v~~~S~DG~ 497 (534)
+.+. .+.|++.+. ..|...|..|..+|...+. ..+|.+....-.+.+.+.||-
T Consensus 28 D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~------~~LDrE~~~~y~l~V~A~D~g 83 (99)
T 3k6d_A 28 DRIP-GSKIKLYGKGVDQEPKGIFKINENSGEVSVT------KALDREAIPSYQLQVETTDEN 83 (99)
T ss_dssp SCCT-TCEEEEESBTTTBSSTTSEEECTTTCEEEEC------SCCCTTTCCEEEEEEEEECTT
T ss_pred CCCC-cEEEEEecCcCCCCCCCEEEEECCceEEEEC------cCCCcccCceEEEEEEEEECC
Confidence 4444 577777653 3456789999999975432 246777777777888888874
No 378
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=20.80 E-value=72 Score=32.78 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=21.4
Q ss_pred EcCCCceecEEEEEeCCCCCCCCCCcEEEEEcCCC
Q 009441 492 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY 526 (534)
Q Consensus 492 ~S~DG~~VP~~lv~~k~~~~~~~~~P~lL~gYGgy 526 (534)
.|.|+..+-++ .|++ ..++.|+|||+|||-
T Consensus 80 ~~edcl~l~v~--~P~~---~~~~~Pviv~iHGGg 109 (498)
T 2ogt_A 80 PSEDGLYLNIW--SPAA---DGKKRPVLFWIHGGA 109 (498)
T ss_dssp CBSCCCEEEEE--ESCS---SSCCEEEEEEECCST
T ss_pred CCCCCcEEEEE--ecCC---CCCCCcEEEEEcCCc
Confidence 36777766554 5652 346789999999987
No 379
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=20.54 E-value=96 Score=27.88 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=20.3
Q ss_pred EEEEEeCCCCCC-CCCCcEEEEEcCCCCc
Q 009441 501 ICIVYRKNLVKL-DGSDPLLLYGYGSYEV 528 (534)
Q Consensus 501 ~~lv~~k~~~~~-~~~~P~lL~gYGgyg~ 528 (534)
+.|.+|++. .. .++.|+||+.||+.+.
T Consensus 34 ~~~~~p~~~-~~~g~~~p~vv~~HG~~~~ 61 (258)
T 2fx5_A 34 CRIYRPRDL-GQGGVRHPVILWGNGTGAG 61 (258)
T ss_dssp EEEEEESST-TGGGCCEEEEEEECCTTCC
T ss_pred EEEEeCCCC-cccCCCceEEEEECCCCCC
Confidence 788888864 22 2378999999998774
No 380
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=20.24 E-value=7.4e+02 Score=25.73 Aligned_cols=136 Identities=10% Similarity=0.087 Sum_probs=0.0
Q ss_pred CCCC--EEEEEEcCCCCeEEEEEEEECCCCCeeccccCCcc---------------------------------------
Q 009441 200 PDNK--LVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVT--------------------------------------- 238 (534)
Q Consensus 200 PDG~--~LA~~~d~~G~E~~~l~v~dl~tg~~~~~~i~~~~--------------------------------------- 238 (534)
.||+ .+++..+.+| .++++|.++|+.+- ..+-..
T Consensus 318 ~~G~~~~~v~~~~~~G----~l~~lD~~tG~~lw-~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg 392 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNG----IVYTLDRTDGALVS-ANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGY 392 (599)
T ss_dssp TTSCEEEEEEEECTTS----EEEEEETTTCCEEE-EEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCS
T ss_pred cCCcEEEEEEEECCCc----EEEEEECCCCCEee-cccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccc
Q ss_pred ---ceeEEccCCeEEEEEECC-----------------------------CC------CCceEEEeecCCCCCCceEeee
Q 009441 239 ---ASVEWAGNEALVYITMDE-----------------------------IL------RPDKAWLHKLEADQSNDICLYH 280 (534)
Q Consensus 239 ---~~~~Ws~Dg~l~Y~~~d~-----------------------------~~------r~~~v~~~~lgt~~~~d~lv~~ 280 (534)
+.++++|+.+++|+...+ .. ....|+.+++.++ +++++
T Consensus 393 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG----~~~W~ 468 (599)
T 1w6s_A 393 HNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITG----DYKWE 468 (599)
T ss_dssp SCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTC----CEEEE
T ss_pred cCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCC----CEEeE
Q ss_pred ecCCceEEEEEEcCCCcEEEEEecCcceeEEEEEeCCCCC-ceeEeeecccceeEEEeeeCCEEEEEE
Q 009441 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITR 347 (534)
Q Consensus 281 e~d~~~~v~~~~S~Dg~~l~i~~~~~~~~ev~~~d~~~~~-~~~~l~~~~~g~~~~v~~~g~~lyi~t 347 (534)
-+.+.-..+-..+-.|..+++ ......++.+|.++++ .|+.-++...-..-..-..+++.|+.+
T Consensus 469 ~~~~~~~~~g~~~tagg~vf~---gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 469 KMERFAVWGGTMATAGDLVFY---GTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp EEESSCCCSBCEEETTTEEEE---ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred ecCCCCccCcceEecCCEEEE---ECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Done!