Query 009443
Match_columns 534
No_of_seqs 270 out of 1722
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 13:10:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009443.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009443hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03552 Cellulose_synt: Cellu 100.0 5E-133 1E-137 1091.6 31.7 515 2-528 109-703 (720)
2 PLN02436 cellulose synthase A 100.0 2E-128 4E-133 1081.1 42.3 513 2-528 475-1071(1094)
3 PLN02400 cellulose synthase 100.0 6E-129 1E-133 1089.3 38.0 514 2-528 466-1061(1085)
4 PLN02638 cellulose synthase A 100.0 5E-129 1E-133 1089.2 37.3 514 2-528 459-1056(1079)
5 PLN02189 cellulose synthase 100.0 3E-128 6E-133 1080.8 38.9 513 2-528 441-1017(1040)
6 PLN02195 cellulose synthase A 100.0 2E-127 3E-132 1069.6 40.4 513 2-528 362-952 (977)
7 PLN02190 cellulose synthase-li 100.0 2E-127 5E-132 1049.4 38.9 510 2-529 200-755 (756)
8 PLN02915 cellulose synthase A 100.0 2E-126 3E-131 1066.7 41.6 515 2-528 397-1021(1044)
9 PLN02893 Cellulose synthase-li 100.0 2E-125 4E-130 1040.2 45.2 511 2-533 203-733 (734)
10 PLN02248 cellulose synthase-li 100.0 6E-126 1E-130 1063.2 39.3 507 15-528 543-1115(1135)
11 PRK11498 bcsA cellulose syntha 100.0 1.5E-56 3.3E-61 507.4 37.2 388 17-511 284-686 (852)
12 TIGR03030 CelA cellulose synth 100.0 4.7E-56 1E-60 503.3 40.6 363 47-513 202-575 (713)
13 PRK05454 glucosyltransferase M 100.0 5.2E-30 1.1E-34 287.6 34.9 222 46-343 191-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 2.3E-30 4.9E-35 260.1 19.3 180 46-295 66-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 9.6E-28 2.1E-32 259.1 31.2 227 16-326 97-333 (444)
16 COG1215 Glycosyltransferases, 100.0 1.1E-27 2.5E-32 255.6 22.0 206 15-299 76-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 3.1E-26 6.7E-31 244.8 32.3 202 16-300 76-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 7.4E-25 1.6E-29 236.4 27.5 251 16-351 71-341 (439)
19 PRK14716 bacteriophage N4 adso 99.9 6.4E-24 1.4E-28 231.2 30.1 236 17-323 90-354 (504)
20 PRK11234 nfrB bacteriophage N4 99.9 7.6E-23 1.7E-27 231.1 25.8 212 18-298 88-334 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 99.9 4.2E-23 9E-28 202.3 18.3 196 17-293 24-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 99.9 1.3E-22 2.9E-27 197.3 18.2 201 17-297 25-234 (234)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 4.6E-22 1E-26 194.8 18.5 203 17-298 22-233 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 1.8E-21 3.8E-26 192.5 17.2 212 4-299 14-236 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 1.2E-22 2.5E-27 197.7 4.2 196 17-292 24-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.8 6.9E-19 1.5E-23 197.2 27.9 212 17-297 95-341 (703)
27 TIGR03472 HpnI hopanoid biosyn 99.8 2.2E-19 4.7E-24 189.9 16.5 198 15-294 62-273 (373)
28 PF13632 Glyco_trans_2_3: Glyc 99.8 4.3E-19 9.3E-24 169.1 13.4 136 84-293 1-143 (193)
29 cd04190 Chitin_synth_C C-termi 99.8 3.9E-19 8.5E-24 176.9 12.5 171 68-295 64-243 (244)
30 cd04192 GT_2_like_e Subfamily 99.8 3.4E-18 7.3E-23 165.3 17.6 197 16-292 19-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.8 2.5E-18 5.4E-23 167.8 16.4 202 22-295 28-234 (235)
32 cd02520 Glucosylceramide_synth 99.8 2E-18 4.3E-23 165.4 13.7 164 17-292 24-195 (196)
33 COG2943 MdoH Membrane glycosyl 99.7 1.2E-15 2.7E-20 161.1 28.1 214 44-332 209-428 (736)
34 cd06439 CESA_like_1 CESA_like_ 99.7 3.4E-16 7.5E-21 154.6 17.8 192 18-295 53-250 (251)
35 PF13506 Glyco_transf_21: Glyc 99.6 3.2E-15 6.8E-20 142.3 13.5 161 51-291 6-175 (175)
36 cd02525 Succinoglycan_BP_ExoA 99.6 1.2E-14 2.6E-19 142.2 16.7 174 40-298 50-232 (249)
37 TIGR03469 HonB hopene-associat 99.6 2.1E-13 4.6E-18 144.9 25.0 198 15-291 61-280 (384)
38 cd06436 GlcNAc-1-P_transferase 99.5 9.4E-14 2E-18 132.9 13.5 137 24-169 27-175 (191)
39 cd06438 EpsO_like EpsO protein 99.3 7.5E-12 1.6E-16 118.4 10.4 101 62-169 61-167 (183)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.3 2E-11 4.4E-16 116.1 13.1 165 17-266 23-195 (201)
41 cd04184 GT2_RfbC_Mx_like Myxoc 99.2 8E-11 1.7E-15 112.0 13.2 165 17-266 25-195 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.1 1E-09 2.2E-14 112.3 14.8 57 43-109 54-110 (299)
43 cd02526 GT2_RfbF_like RfbF is 99.1 2.9E-10 6.2E-15 111.0 10.2 146 45-266 45-198 (237)
44 cd06433 GT_2_WfgS_like WfgS an 99.1 5E-10 1.1E-14 105.3 11.3 134 49-266 52-188 (202)
45 cd04186 GT_2_like_c Subfamily 99.1 1.2E-09 2.5E-14 99.7 11.3 129 24-266 28-159 (166)
46 cd06442 DPM1_like DPM1_like re 99.1 5.1E-09 1.1E-13 101.2 16.4 81 21-111 26-107 (224)
47 PLN02726 dolichyl-phosphate be 99.0 8.6E-09 1.9E-13 102.2 15.9 131 25-169 43-178 (243)
48 TIGR01556 rhamnosyltran L-rham 99.0 1.9E-09 4.2E-14 109.0 11.0 148 44-267 42-196 (281)
49 cd06420 GT2_Chondriotin_Pol_N 99.0 1.5E-08 3.2E-13 94.8 15.9 109 24-169 28-138 (182)
50 cd02522 GT_2_like_a GT_2_like_ 98.9 1.5E-08 3.3E-13 97.7 14.4 129 47-263 49-178 (221)
51 cd04196 GT_2_like_d Subfamily 98.9 2.4E-08 5.3E-13 95.3 13.1 168 18-266 22-197 (214)
52 PF03142 Chitin_synth_2: Chiti 98.9 8E-08 1.7E-12 105.4 18.3 167 80-297 200-378 (527)
53 cd06913 beta3GnTL1_like Beta 1 98.8 7.6E-08 1.6E-12 93.4 15.4 87 17-109 20-111 (219)
54 cd04185 GT_2_like_b Subfamily 98.8 6.7E-08 1.4E-12 92.2 14.5 143 18-267 21-168 (202)
55 cd06423 CESA_like CESA_like is 98.8 1.1E-08 2.3E-13 92.6 7.9 108 47-169 53-166 (180)
56 cd04188 DPG_synthase DPG_synth 98.8 1.2E-07 2.5E-12 91.5 15.4 77 24-110 32-110 (211)
57 PF10111 Glyco_tranf_2_2: Glyc 98.7 3.5E-07 7.6E-12 93.3 14.5 149 45-266 58-216 (281)
58 KOG2571 Chitin synthase/hyalur 98.7 2.1E-07 4.5E-12 105.8 13.9 166 63-292 424-596 (862)
59 cd04179 DPM_DPG-synthase_like 98.7 1.6E-07 3.5E-12 87.7 10.6 134 22-169 28-163 (185)
60 PF00535 Glycos_transf_2: Glyc 98.6 2.4E-08 5.3E-13 90.3 4.6 138 20-169 25-165 (169)
61 PRK10073 putative glycosyl tra 98.6 2E-07 4.4E-12 97.3 10.9 83 17-110 29-113 (328)
62 cd04187 DPM1_like_bac Bacteria 98.5 1.8E-06 4E-11 80.9 12.7 127 25-169 32-159 (181)
63 PRK10063 putative glycosyl tra 98.4 7.1E-06 1.5E-10 82.3 14.9 46 47-103 58-103 (248)
64 COG1216 Predicted glycosyltran 98.4 5.6E-06 1.2E-10 85.4 14.2 174 17-267 26-215 (305)
65 cd00761 Glyco_tranf_GTA_type G 98.3 4.8E-06 1E-10 73.3 11.2 62 47-122 52-114 (156)
66 PRK10018 putative glycosyl tra 98.3 3.9E-06 8.4E-11 85.9 12.0 81 17-108 28-111 (279)
67 PTZ00260 dolichyl-phosphate be 98.0 0.00016 3.4E-09 75.9 16.2 76 24-109 109-189 (333)
68 KOG2547 Ceramide glucosyltrans 97.9 2.4E-05 5.1E-10 81.2 6.2 197 16-291 108-314 (431)
69 PRK10714 undecaprenyl phosphat 97.8 0.0024 5.1E-08 66.8 21.1 75 24-108 40-116 (325)
70 PRK13915 putative glucosyl-3-p 97.7 0.00033 7.2E-09 72.6 11.9 52 62-121 100-152 (306)
71 cd02511 Beta4Glucosyltransfera 96.0 0.03 6.5E-07 55.0 8.9 72 24-110 28-99 (229)
72 PF02364 Glucan_synthase: 1,3- 96.0 0.19 4.1E-06 58.1 16.1 73 243-320 409-482 (817)
73 KOG2978 Dolichol-phosphate man 95.3 0.43 9.3E-06 46.1 12.9 77 23-109 36-115 (238)
74 COG0463 WcaA Glycosyltransfera 95.1 0.11 2.4E-06 46.5 8.4 75 17-102 26-102 (291)
75 PF13712 Glyco_tranf_2_5: Glyc 88.5 0.68 1.5E-05 45.7 4.9 58 49-119 31-89 (217)
76 cd00899 b4GalT Beta-4-Galactos 84.9 3.1 6.7E-05 41.3 7.3 53 245-297 138-200 (219)
77 cd02514 GT13_GLCNAC-TI GT13_GL 80.2 12 0.00026 39.5 10.0 45 68-121 88-136 (334)
78 KOG2977 Glycosyltransferase [G 78.2 14 0.0003 38.2 9.2 93 25-127 107-204 (323)
79 PRK09382 ispDF bifunctional 2- 74.5 18 0.00039 38.8 9.6 40 65-108 83-122 (378)
80 PF13704 Glyco_tranf_2_4: Glyc 72.8 8.2 0.00018 32.3 5.3 64 25-95 22-85 (97)
81 PF02709 Glyco_transf_7C: N-te 68.4 5.2 0.00011 33.0 3.0 22 245-266 46-67 (78)
82 PF13896 Glyco_transf_49: Glyc 67.3 7.5 0.00016 40.6 4.7 45 70-119 120-164 (317)
83 COG4092 Predicted glycosyltran 64.7 60 0.0013 33.4 10.1 99 27-128 42-141 (346)
84 KOG3737 Predicted polypeptide 60.6 5.7 0.00012 42.5 2.2 69 27-104 191-262 (603)
85 KOG0916 1,3-beta-glucan syntha 47.5 3.7E+02 0.008 33.9 14.2 86 243-333 1173-1259(1679)
86 PF02434 Fringe: Fringe-like; 42.4 40 0.00086 34.0 4.9 30 80-111 85-114 (252)
87 cd02540 GT2_GlmU_N_bac N-termi 41.4 1.9E+02 0.004 27.7 9.4 56 47-109 62-117 (229)
88 TIGR03310 matur_ygfJ molybdenu 40.0 1.5E+02 0.0032 27.5 8.2 54 48-108 63-116 (188)
89 PRK02726 molybdopterin-guanine 39.3 1.5E+02 0.0032 28.4 8.2 42 63-108 78-119 (200)
90 PF15050 SCIMP: SCIMP protein 36.0 48 0.001 29.8 3.7 51 386-437 2-59 (133)
91 cd02503 MobA MobA catalyzes th 35.2 1.8E+02 0.0039 26.8 7.9 42 62-107 68-109 (181)
92 KOG1183 N-acetylglucosaminyltr 33.2 7.1E+02 0.015 28.2 12.7 27 488-514 506-532 (623)
93 PF01762 Galactosyl_T: Galacto 32.0 1.4E+02 0.003 28.4 6.7 61 41-106 43-104 (195)
94 PF04724 Glyco_transf_17: Glyc 30.0 1.4E+02 0.0029 32.0 6.7 56 46-103 137-199 (356)
95 PF06638 Strabismus: Strabismu 29.5 88 0.0019 34.8 5.2 17 517-533 205-221 (505)
96 cd04182 GT_2_like_f GT_2_like_ 29.0 1.8E+02 0.0039 26.5 6.8 44 63-108 74-117 (186)
97 PF01128 IspD: 2-C-methyl-D-er 29.0 1.8E+02 0.0039 28.8 7.0 78 20-108 40-118 (221)
98 PF06210 DUF1003: Protein of u 28.2 43 0.00093 29.6 2.1 10 485-494 13-22 (108)
99 PLN02728 2-C-methyl-D-erythrit 27.9 1.6E+02 0.0034 29.7 6.5 42 65-108 103-144 (252)
100 PRK00317 mobA molybdopterin-gu 26.8 1.5E+02 0.0032 28.0 5.8 41 64-108 75-115 (193)
101 COG4858 Uncharacterized membra 26.1 6.3E+02 0.014 24.7 10.0 58 453-512 99-160 (226)
102 cd02509 GDP-M1P_Guanylyltransf 24.2 2.4E+02 0.0052 28.5 7.1 54 46-104 72-125 (274)
103 PF05679 CHGN: Chondroitin N-a 24.0 2.8E+02 0.0062 30.9 8.2 56 41-104 306-363 (499)
104 PF13779 DUF4175: Domain of un 23.4 2.3E+02 0.0049 33.8 7.5 27 446-472 3-29 (820)
105 cd02516 CDP-ME_synthetase CDP- 23.2 2.3E+02 0.005 26.9 6.5 44 64-108 79-122 (218)
106 PF12804 NTP_transf_3: MobA-li 22.8 3E+02 0.0064 24.7 6.9 54 63-122 70-124 (160)
107 cd06915 NTP_transferase_WcbM_l 22.5 5.4E+02 0.012 24.1 9.0 41 63-109 81-121 (223)
108 TIGR02460 osmo_MPGsynth mannos 21.6 1.8E+02 0.004 31.0 5.6 41 62-105 141-181 (381)
109 COG1211 IspD 4-diphosphocytidy 21.5 4E+02 0.0087 26.7 7.8 80 19-106 43-124 (230)
110 PLN03153 hypothetical protein; 21.2 1.7E+02 0.0037 32.8 5.6 30 80-111 209-238 (537)
111 PRK14503 mannosyl-3-phosphogly 20.8 1.1E+02 0.0024 32.7 3.8 43 62-107 142-184 (393)
112 cd04181 NTP_transferase NTP_tr 20.5 4.9E+02 0.011 24.3 8.2 41 63-109 81-121 (217)
113 PF07457 DUF1516: Protein of u 20.2 6E+02 0.013 22.4 9.4 57 461-522 44-102 (110)
No 1
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=5.5e-133 Score=1091.59 Aligned_cols=515 Identities=41% Similarity=0.781 Sum_probs=477.2
Q ss_pred hHHHHhHhhhc-------------CC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAVED-------------GE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~~~-------------~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|++|||.++++ |. +++++|||+||||++++++++ |.++.++|+++|++|||||+++||+|
T Consensus 109 ~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~----~~~g~~lP~lvYvsREKrp~~~Hh~K 184 (720)
T PF03552_consen 109 FKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK----DVDGNELPMLVYVSREKRPGYPHHFK 184 (720)
T ss_pred HHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc----ccccCcCCeEEEEeccCCCCCCchhh
Confidence 78889865443 22 578999999999999998765 67889999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|+++||+|||+|+|||||+|||+.++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus 185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~ 264 (720)
T PF03552_consen 185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN 264 (720)
T ss_pred hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-CccccCc----------------------------------------------
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKGI---------------------------------------------- 178 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~~---------------------------------------------- 178 (534)
++|+||+|||+|+||||+|||+|||| .|++...
T Consensus 265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (720)
T PF03552_consen 265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE 344 (720)
T ss_pred ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence 99999999999999999999999999 5543110
Q ss_pred --------------chHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcc
Q 009443 179 --------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV 244 (534)
Q Consensus 179 --------------d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~sv 244 (534)
+.++++++||+|++||+|+..+.. ..+....+.++|+||++|++|+||++|+||+||||.|||+
T Consensus 345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSv 422 (720)
T PF03552_consen 345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSV 422 (720)
T ss_pred cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEec
Confidence 013667899999999999976542 3344666789999999999999999999999999999999
Q ss_pred cchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccC-CcccchhHHHHHHhHh
Q 009443 245 SEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMS 323 (534)
Q Consensus 245 tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~Y~~~~ 323 (534)
|||+.||++||++||||+||.|++++|.|+||+||.+.|.|++|||+|++||++||+||++++ .++|+++|||+|++.+
T Consensus 423 tEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~ 502 (720)
T PF03552_consen 423 TEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYM 502 (720)
T ss_pred ccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999986 5799999999999999
Q ss_pred HhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHH
Q 009443 324 LFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHF 403 (534)
Q Consensus 324 ~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~ 403 (534)
+|| ++|+|.++|+++|++||++|++++|+++.+|+++|++++++++++.++|++|+|+++++|||+||+|+|.++++++
T Consensus 503 ~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~L 581 (720)
T PF03552_consen 503 LYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHL 581 (720)
T ss_pred hhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCchHHH
Q 009443 404 YGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV--GNWDKLF 481 (534)
Q Consensus 404 ~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~--g~~~~~~ 481 (534)
++++++++|++|+++++|.||+|+.++++.+.+ ++|+|+ ++++++|.++++++|++|+++|+++.++. ++|++++
T Consensus 582 fAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~ 658 (720)
T PF03552_consen 582 FAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLL 658 (720)
T ss_pred HHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHH
Confidence 999999999999999999999999875443333 578888 78899999999999999999999998864 3688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 482 AQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 482 ~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
+++++++|++++++||++||++||+ |+|+++++||++||++|+++
T Consensus 659 g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~ll 703 (720)
T PF03552_consen 659 GQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLL 703 (720)
T ss_pred HHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHH
Confidence 9999999999999999999999976 69999999999999999986
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.8e-128 Score=1081.06 Aligned_cols=513 Identities=34% Similarity=0.676 Sum_probs=472.5
Q ss_pred hHHHHhHhhhc-------------CC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAVED-------------GE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~~~-------------~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|+.|||.++++ |. +++++|||+||||++|++++. |.++.++|+++||+|||||+++||+|
T Consensus 475 ~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~K 550 (1094)
T PLN02436 475 FKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKK 550 (1094)
T ss_pred HHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchh
Confidence 78999976653 22 568999999999999998754 55788999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|++|||+|||+|+|||||+|||+++|++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 551 AGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~ 630 (1094)
T PLN02436 551 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDIN 630 (1094)
T ss_pred hhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-CccccC-----------------------------------------------
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG----------------------------------------------- 177 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~----------------------------------------------- 177 (534)
++|+||+|||+|+||||+|||+|||| .|+...
T Consensus 631 ~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1094)
T PLN02436 631 MKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHAL 710 (1094)
T ss_pred ccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999 433100
Q ss_pred -----------------cchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccC
Q 009443 178 -----------------IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFS 240 (534)
Q Consensus 178 -----------------~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~ 240 (534)
.+.+.++++||+|++||+|+..+.. ..+..+.+++++++|++|++|+||++|+||+||||.
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwi 788 (1094)
T PLN02436 711 ENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENG--GVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWI 788 (1094)
T ss_pred cccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhc--CCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCee
Confidence 0012455789999999999988763 344455678999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccC-CcccchhHHHHH
Q 009443 241 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCY 319 (534)
Q Consensus 241 ~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~Y 319 (534)
|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++|++|++++ .++|+++|||+|
T Consensus 789 YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Y 868 (1094)
T PLN02436 789 YGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSY 868 (1094)
T ss_pred ccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHH
Confidence 9999999999999999999999998888899999999999999999999999999999999999865 368999999999
Q ss_pred HhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHH
Q 009443 320 GEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSV 399 (534)
Q Consensus 320 ~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~ 399 (534)
++.++|| ++++|.++|+++|++||++|++++|.++.+|+++|++++++++++.++|++|+|.++++|||+||+|+|.++
T Consensus 869 l~~~ly~-l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~t 947 (1094)
T PLN02436 869 INSVVYP-WTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGV 947 (1094)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--Cc
Q 009443 400 TSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NW 477 (534)
Q Consensus 400 ~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g--~~ 477 (534)
++++++++++++|+|++++++|.||+|+.+++.. +++|+|+ ++++++|+++++++|++|+++|+.+++..| .|
T Consensus 948 Sa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~~----a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~ 1022 (1094)
T PLN02436 948 SSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEF----SELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSW 1022 (1094)
T ss_pred HHHHHHHHHHHHHHhccCcccceecccccccccc----cceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 9999999999999999999999999998765421 3578999 899999999999999999999999998644 68
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 478 DKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 478 ~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
+++++++++++|++++++||++||++| ++|+|++|++||++||++|+++
T Consensus 1023 g~l~~~l~~~~wvvv~lyPf~kgL~gr--~~r~P~~v~v~s~lla~~~~l~ 1071 (1094)
T PLN02436 1023 GPLFGRLFFALWVIVHLYPFLKGLLGK--QDRMPTIILVWSILLASILTLL 1071 (1094)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeeehHHHHHHHHHHHHH
Confidence 899999999999999999999999955 5699999999999999999985
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=5.5e-129 Score=1089.32 Aligned_cols=514 Identities=32% Similarity=0.656 Sum_probs=473.7
Q ss_pred hHHHHhHhh-------------hcCC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAV-------------EDGE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~-------------~~~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|+.|||.++ +||. +++++|||+||||++|++++. |.++.++|+++||+|||||+++||+|
T Consensus 466 ~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~----d~~g~~LP~LVYVSREKRP~~~Hh~K 541 (1085)
T PLN02400 466 FKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGL----DTDGNELPRLVYVSREKRPGFQHHKK 541 (1085)
T ss_pred HHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCc----ccccccCceeEEEeccCCCCCCcchh
Confidence 788999765 1222 568999999999999998764 45778999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|+++||+|||+|+|||||+|||+++|++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 542 AGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~ 621 (1085)
T PLN02400 542 AGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDIN 621 (1085)
T ss_pred hhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-Ccccc----------------------------------C-------------
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHK----------------------------------G------------- 177 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~----------------------------------~------------- 177 (534)
++|+||+|||+|+||||+|||+|||| .|+.. +
T Consensus 622 ~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (1085)
T PLN02400 622 LKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMED 701 (1085)
T ss_pred ccccccCCCccccccCcceeeeeeccCCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999 34210 0
Q ss_pred ---------------cchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCC
Q 009443 178 ---------------IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQ 242 (534)
Q Consensus 178 ---------------~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~ 242 (534)
.+.++++++||+|++||+|+.... ...+..+.+++++++|++|++|+||++|+||+||||.|+
T Consensus 702 ~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~--~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYG 779 (1085)
T PLN02400 702 IEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQ--GGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYG 779 (1085)
T ss_pred cccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHh--cCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeecc
Confidence 001236679999999999998543 223444567899999999999999999999999999999
Q ss_pred cccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccC-CcccchhHHHHHHh
Q 009443 243 SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGE 321 (534)
Q Consensus 243 svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~Y~~ 321 (534)
|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++++||++.+ .++|+++|||+|++
T Consensus 780 SvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~ 859 (1085)
T PLN02400 780 SVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYIN 859 (1085)
T ss_pred ceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999865 37999999999999
Q ss_pred HhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHH
Q 009443 322 MSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTS 401 (534)
Q Consensus 322 ~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~ 401 (534)
+++|| ++++|.++|+++|++||++|++++|.++.+++++|+.++++++++.++|++|+|.++++|||+||+|+|.++++
T Consensus 860 ~~~y~-~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa 938 (1085)
T PLN02400 860 TIVYP-ITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSA 938 (1085)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchH
Q 009443 402 HFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDK 479 (534)
Q Consensus 402 ~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g--~~~~ 479 (534)
++++++++++|+|++++++|.||+|..+++.. .+++|+|+ ++++++|+++++++|++|+++|+++++..| .|++
T Consensus 939 ~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~ 1014 (1085)
T PLN02400 939 HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGP 1014 (1085)
T ss_pred HHHHHHHHHHHHhcCCcccceecCCccccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhH
Confidence 99999999999999999999999998765432 25789999 899999999999999999999999998644 6889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 480 LFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 480 ~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
+++++++++|++++++||++||++|+ +|+|++|++||++||++|+++
T Consensus 1015 l~~~~~~~~wvvv~l~Pf~kgL~gR~--~r~P~~v~~~s~lla~~~~l~ 1061 (1085)
T PLN02400 1015 LFGKLFFAIWVIAHLYPFLKGLLGRQ--NRTPTIVIVWSILLASIFSLL 1061 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999886 899999999999999999985
No 4
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=5.2e-129 Score=1089.16 Aligned_cols=514 Identities=33% Similarity=0.662 Sum_probs=474.5
Q ss_pred hHHHHhHhh-------------hcCC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAV-------------EDGE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~-------------~~~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|+.|||.+. +||. +++++|||+||||++|++++. |.++.++|+++||+|||||+++||+|
T Consensus 459 ~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~K 534 (1079)
T PLN02638 459 FKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKK 534 (1079)
T ss_pred HHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccc
Confidence 788998555 2333 668999999999999998764 45678999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|+++||||||+|+|||||+|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus 535 AGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~ 614 (1079)
T PLN02638 535 AGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDIN 614 (1079)
T ss_pred cchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-CccccC-----------------------------c-----------------
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG-----------------------------I----------------- 178 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~-----------------------------~----------------- 178 (534)
++|+||+|||+||||||+|||+|||| .|+... .
T Consensus 615 ~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1079)
T PLN02638 615 LRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLED 694 (1079)
T ss_pred cccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 99999999999999999999999999 443210 0
Q ss_pred -----------c-------hHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccC
Q 009443 179 -----------D-------LAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFS 240 (534)
Q Consensus 179 -----------d-------~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~ 240 (534)
+ ...++++||+|++||+|+..+..+.. ..+.+++++++|++|++|+||++|+||+||||.
T Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~ 772 (1079)
T PLN02638 695 IEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWI 772 (1079)
T ss_pred ccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCee
Confidence 0 01355799999999999987765433 335678999999999999999999999999999
Q ss_pred CCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccC-CcccchhHHHHH
Q 009443 241 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCY 319 (534)
Q Consensus 241 ~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~Y 319 (534)
|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++|++|++.+ .++|++.|||+|
T Consensus 773 YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Y 852 (1079)
T PLN02638 773 YGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAY 852 (1079)
T ss_pred ecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHH
Confidence 9999999999999999999999998878999999999999999999999999999999999999975 378999999999
Q ss_pred HhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHH
Q 009443 320 GEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSV 399 (534)
Q Consensus 320 ~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~ 399 (534)
+++++|| ++++|.++|+++|++||++|++++|+++.+|+++|++++++++++.++|++|+|.++++|||+||||+|.++
T Consensus 853 l~~~~yp-~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~t 931 (1079)
T PLN02638 853 VNTTIYP-ITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGV 931 (1079)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhh
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--Cc
Q 009443 400 TSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NW 477 (534)
Q Consensus 400 ~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g--~~ 477 (534)
++++++++++++|+|++++++|.||+|..+++.. .+++|+|+ ++++++|.++++++|++|+++|+++++..| .|
T Consensus 932 Sa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~ 1007 (1079)
T PLN02638 932 SAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSW 1007 (1079)
T ss_pred HHHHHHHHHHHHHHHccCcccceecccccccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 9999999999999999999999999998765532 25899999 899999999999999999999999998645 68
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 478 DKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 478 ~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
+++++++++++|++++++||++||++|| +|+|+++++||++|+++|+++
T Consensus 1008 ~~~~~~~~~~~wvv~~l~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~ 1056 (1079)
T PLN02638 1008 GPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVVWSILLASIFSLL 1056 (1079)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHH
Confidence 8999999999999999999999999996 799999999999999999985
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=2.6e-128 Score=1080.80 Aligned_cols=513 Identities=33% Similarity=0.681 Sum_probs=473.5
Q ss_pred hHHHHhHhh-------------hcCC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAV-------------EDGE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~-------------~~~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|+.||+.+. +||. +++++|||+||||++|++++. |.++.++|+++||+|||||+++||+|
T Consensus 441 ~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~K 516 (1040)
T PLN02189 441 FKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKK 516 (1040)
T ss_pred HHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccc
Confidence 788888554 3333 668999999999999998764 45688999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|+++||||||+|+|||||+|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus 517 AGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~ 596 (1040)
T PLN02189 517 AGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDIN 596 (1040)
T ss_pred hhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-Ccccc-------------------Cc------------------------chH
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHK-------------------GI------------------------DLA 181 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~-------------------~~------------------------d~~ 181 (534)
++|+||+|||+||||||+|||+|||| .|+.. .. ...
T Consensus 597 ~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1040)
T PLN02189 597 MKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQM 676 (1040)
T ss_pred ecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhh
Confidence 99999999999999999999999999 44311 00 013
Q ss_pred hhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEE
Q 009443 182 ELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTS 261 (534)
Q Consensus 182 ~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs 261 (534)
+++++||+|.+|++|+..+.. ..+..+.+.+++++|++|++|+||++|+||+||||.|+|+|||+.||++||++||||
T Consensus 677 ~~~~~fG~S~~fi~S~~~~~~--~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrS 754 (1040)
T PLN02189 677 NFEKKFGQSAIFVTSTLMEEG--GVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRS 754 (1040)
T ss_pred hhHhhhccchhhhhhhhhhhc--CCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCce
Confidence 456799999999999987742 233445678999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccCC--cccchhHHHHHHhHhHhhHHhHHHHHHHHHH
Q 009443 262 TYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLFPLLYCLPLWCFATL 339 (534)
Q Consensus 262 ~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~--~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~ 339 (534)
+||+|++++|.|+||+|+.+++.||+|||+|++||+++|+||++.+. ++|++.|||+|+++++|| ++++|.++|+++
T Consensus 755 vY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~l 833 (1040)
T PLN02189 755 IYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTL 833 (1040)
T ss_pred EecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99998889999999999999999999999999999999999999653 679999999999999999 999999999999
Q ss_pred HHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCccc
Q 009443 340 PQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKA 419 (534)
Q Consensus 340 P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~ 419 (534)
|++||++|++++|.++.+++.+|+.++++++++.++|++|+|++.++|||+||+|+|.++++++++++++++|+|+++++
T Consensus 834 P~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~ 913 (1040)
T PLN02189 834 PAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDT 913 (1040)
T ss_pred HHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHH
Q 009443 420 SFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAI 497 (534)
Q Consensus 420 ~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g--~~~~~~~~l~~~~w~~~~l~p~ 497 (534)
+|.||+|..+++.. ++.|+|+ ++++++|.++++++|++|+++|+++++..| .|+++++++++++|++++++||
T Consensus 914 ~F~VTsK~~~d~~~----~~ly~f~-~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf 988 (1040)
T PLN02189 914 NFTVTSKATDDDEF----GELYAFK-WTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPF 988 (1040)
T ss_pred cceecccccccccc----ccceeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHH
Confidence 99999998766532 4789999 899999999999999999999999998645 6789999999999999999999
Q ss_pred HHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 498 VEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 498 ~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
++||++|| +|+|+++++||++++++|+++
T Consensus 989 ~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~ 1017 (1040)
T PLN02189 989 LKGLMGRQ--NRTPTIVVIWSVLLASIFSLL 1017 (1040)
T ss_pred HHHHhccC--CCCCeeehHHHHHHHHHHHHH
Confidence 99999996 799999999999999999985
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.6e-127 Score=1069.63 Aligned_cols=513 Identities=34% Similarity=0.648 Sum_probs=472.6
Q ss_pred hHHHHhHhhhc-------------CC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAVED-------------GE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~~~-------------~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|+.|||.++++ |. +++++|||+||||+++++++. |.++.++|+++||+|||||+++||+|
T Consensus 362 ~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~K 437 (977)
T PLN02195 362 YKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGAR----DIEGNELPRLVYVSREKRPGYQHHKK 437 (977)
T ss_pred HHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCc----ccccccCceeEEEeccCCCCCCcccc
Confidence 78999976644 11 568999999999999887653 55788999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|+++||||||+|+|||||+|||++++++||||+||+.++++||||+||+|+|++++|+|++++++||+++
T Consensus 438 AGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~ 517 (977)
T PLN02195 438 AGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVN 517 (977)
T ss_pred cchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-Ccccc-------------------Cc-----------------c---------
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHK-------------------GI-----------------D--------- 179 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~-------------------~~-----------------d--------- 179 (534)
++|+||+|||+||||||+|||+|||| .|+.. +. +
T Consensus 518 ~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (977)
T PLN02195 518 MKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREID 597 (977)
T ss_pred eccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 99999999999999999999999999 44331 00 0
Q ss_pred ------------hHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcccch
Q 009443 180 ------------LAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSED 247 (534)
Q Consensus 180 ------------~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED 247 (534)
..+++++||+|.+||+|+.....+.. ..+.+++++++|++|++|+||++|+||+||||.|+|+|||
T Consensus 598 ~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~--~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED 675 (977)
T PLN02195 598 NYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVP--ESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTED 675 (977)
T ss_pred ccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCC--CCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecH
Confidence 11456799999999999977664433 2456788999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccCC--cccchhHHHHHHhHhHh
Q 009443 248 FFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP--SRMSLLLSMCYGEMSLF 325 (534)
Q Consensus 248 ~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~--~~l~~~qrl~Y~~~~~~ 325 (534)
+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++||+++|++|++.+. ++|+++|||+|++.++|
T Consensus 676 v~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly 755 (977)
T PLN02195 676 ILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVY 755 (977)
T ss_pred HHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999889999999999999999999999999999999999998652 78999999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHH
Q 009443 326 PLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYG 405 (534)
Q Consensus 326 ~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~ 405 (534)
| ++++|.++|+++|++||++|++++|+++.+++++|++++++++++.++|++|+|.++++|||+||+|+|.++++++++
T Consensus 756 ~-~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfa 834 (977)
T PLN02195 756 P-FTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFA 834 (977)
T ss_pred H-HHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHH
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHH
Q 009443 406 SMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQ 483 (534)
Q Consensus 406 ~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g--~~~~~~~~ 483 (534)
++++++|++++++++|.||+|..++++. +++|+|+ ++++++|.++++++|++|+++|+++++..| .|++++++
T Consensus 835 vl~~llKvLggs~~~F~VTsK~~dd~~~----~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~ 909 (977)
T PLN02195 835 VFQGFLKMLAGLDTNFTVTAKAADDTEF----GELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGK 909 (977)
T ss_pred HHHHHHHHHcCCCccceeccccccccch----hcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHH
Confidence 9999999999999999999998875432 3678999 899999999999999999999999998645 68889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 484 VLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 484 l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
+++++|++++++||++||++|| +|+|+++++||++++++|+++
T Consensus 910 ~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~ 952 (977)
T PLN02195 910 VFFAFWVILHLYPFLKGLMGRQ--NRTPTIVVLWSVLLASVFSLV 952 (977)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHH
Confidence 9999999999999999999996 799999999999999999985
No 7
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=2.5e-127 Score=1049.35 Aligned_cols=510 Identities=31% Similarity=0.571 Sum_probs=463.0
Q ss_pred hHHHHhHhhhc-------C----C-CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHH
Q 009443 2 FEEQVMKAVED-------G----E-YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGAL 69 (534)
Q Consensus 2 ~~~~~~~~~~~-------~----~-~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaL 69 (534)
|++||+.+.++ | + +.+++|||+||||++|++++ +.++.++|+++|++|||||+++||+|||||
T Consensus 200 ~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAm 274 (756)
T PLN02190 200 LSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAM 274 (756)
T ss_pred HHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchh
Confidence 78899877421 1 1 57899999999999999654 235779999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCC-CceEEEcCCccccCCCccchHHHHHHHhhhhhHhh
Q 009443 70 NVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTS-SSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPG 148 (534)
Q Consensus 70 N~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~-~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g 148 (534)
|+++|+|+++||+|||+|+|||||+|||++++++||||+||+.+ +++||||+||+|+ |+|+|++++||++.++|
T Consensus 275 NaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~G 349 (756)
T PLN02190 275 NFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRG 349 (756)
T ss_pred HHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeecc
Confidence 99999999999999999999999999999999999999998754 5899999999997 78999999999999999
Q ss_pred hhhcCCcccccceeeeeccccCC-CccccCc-------------chHhhhhhhcCchhHHhhhhhhccccccCCccchhh
Q 009443 149 MDGLKGPFLTGTGHYIRRESLYG-NFKHKGI-------------DLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 214 (534)
Q Consensus 149 ~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~~-------------d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~ 214 (534)
.||+|||+|+||||+|||+|||| +|+.... +..+++++||+|++||+|+..+.++... .++...+
T Consensus 350 ldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~-~~~~~~~ 428 (756)
T PLN02190 350 IAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPN-PQNSLTN 428 (756)
T ss_pred ccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCC-CccchHH
Confidence 99999999999999999999999 5554221 1234668999999999999877654332 2334578
Q ss_pred HHhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccc
Q 009443 215 LQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLI 294 (534)
Q Consensus 215 ~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~ 294 (534)
++++|++|++|+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|++|+++.+.+.||+|||+|++
T Consensus 429 ~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~l 508 (756)
T PLN02190 429 SIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLI 508 (756)
T ss_pred HHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhH
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred hhhhhhcCCcccC-CcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHH
Q 009443 295 DVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKH 373 (534)
Q Consensus 295 qi~~~~~~p~~~~-~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 373 (534)
||+++|+||++.+ .++|++.||++|++..+ | ++++|+++|+++|++||++|++++|+. +|+.+++.++++++++.
T Consensus 509 qI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~ 584 (756)
T PLN02190 509 EVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LRSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYT 584 (756)
T ss_pred HHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHH
Confidence 9999999999864 47999999999999877 8 999999999999999999999999964 78888888888899999
Q ss_pred HHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcc-------------hhhhhhhcccc
Q 009443 374 LQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD-------------NEQVKRYEMGQ 440 (534)
Q Consensus 374 ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~-------------~~~~~~y~~~~ 440 (534)
++|++|+|+++++|||+||||+|.++++++++++++++|++|+++++|+||+|+.+ +++.++|++|+
T Consensus 585 l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (756)
T PLN02190 585 LWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGK 664 (756)
T ss_pred HHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhcce
Confidence 99999999999999999999999999999999999999999999999999999754 34467889999
Q ss_pred eeecccchhHHHHHHHHHHHHHHHHHHHHHHhhc-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHH
Q 009443 441 FDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV-----GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAI 515 (534)
Q Consensus 441 f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~-----g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~ 515 (534)
|+|+ ++++++|.++++++|++|++.|+++++.. |.++. ++++++|+|++++++||++||+ |||||+||+|++
T Consensus 665 f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~ 741 (756)
T PLN02190 665 FEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTL 741 (756)
T ss_pred eEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHH
Confidence 9999 89999999999999999999999887631 34444 5999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 009443 516 LLSSVFFVTFLFFG 529 (534)
Q Consensus 516 ~~s~~~~~~~~~~~ 529 (534)
++|++|+++|++|+
T Consensus 742 ~~s~~l~~~f~~~~ 755 (756)
T PLN02190 742 SKAAFLAVLFVVFS 755 (756)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999986
No 8
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.6e-126 Score=1066.73 Aligned_cols=515 Identities=33% Similarity=0.660 Sum_probs=471.2
Q ss_pred hHHHHhHhhhc-------------CC---CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCCh
Q 009443 2 FEEQVMKAVED-------------GE---YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFK 65 (534)
Q Consensus 2 ~~~~~~~~~~~-------------~~---~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~K 65 (534)
|+.|||.++++ |. +++.+|||+||||++|++++. |.++.++|+++||+|||||+++||+|
T Consensus 397 ~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~----d~~g~~lP~LVYVSREKRP~~~Hh~K 472 (1044)
T PLN02915 397 FKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGAL----DVEGKELPRLVYVSREKRPGYNHHKK 472 (1044)
T ss_pred HHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCCCc----ccccCccceeEEEecccCCCCCcchh
Confidence 78999976644 12 556799999999999987753 55778999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhh
Q 009443 66 GGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQ 145 (534)
Q Consensus 66 AGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~ 145 (534)
|||||+++|+|++|||+|||+|+|||||+|||+++|++||||+||+.++++||||+||+|+|++++|+|+|++++||++.
T Consensus 473 AGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~ 552 (1044)
T PLN02915 473 AGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDIN 552 (1044)
T ss_pred hhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCcccccceeeeeccccCC-CccccC-----------------------------------------------
Q 009443 146 WPGMDGLKGPFLTGTGHYIRRESLYG-NFKHKG----------------------------------------------- 177 (534)
Q Consensus 146 ~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~~~~----------------------------------------------- 177 (534)
++|+||+|||+|+||||+|||+|||| .|+...
T Consensus 553 ~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1044)
T PLN02915 553 MKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRK 632 (1044)
T ss_pred cccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999 443200
Q ss_pred -------------------------------------------cchHhhhhhhcCchhHHhhhhhhccccccCCccchhh
Q 009443 178 -------------------------------------------IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNV 214 (534)
Q Consensus 178 -------------------------------------------~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~ 214 (534)
...+.++++||+|++||+|+..... ..+..+.+++
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~--~~~~~~~~~s 710 (1044)
T PLN02915 633 KKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDG--GLPEGTNPAA 710 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhc--CCCCCCCcHH
Confidence 0012355699999999999988543 3344456789
Q ss_pred HHhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccc
Q 009443 215 LQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLI 294 (534)
Q Consensus 215 ~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~ 294 (534)
++++|++|++|+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+|||+|++
T Consensus 711 ~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~l 790 (1044)
T PLN02915 711 LIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSV 790 (1044)
T ss_pred HHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred hhhhhhcCCcccC-CcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHH
Q 009443 295 DVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKH 373 (534)
Q Consensus 295 qi~~~~~~p~~~~-~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 373 (534)
||++++++|++.+ .++|+++||++|+++++|| ++++|.++|+++|++||++|++++|.++..+..++++++++++++.
T Consensus 791 qIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~ 869 (1044)
T PLN02915 791 EIFMSRHCPLWYAYGGKLKWLERLAYINTIVYP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATS 869 (1044)
T ss_pred HHHHhccCCcccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHH
Confidence 9999999999964 3799999999999999999 9999999999999999999999999887777777778888999999
Q ss_pred HHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHH
Q 009443 374 LQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPM 453 (534)
Q Consensus 374 ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~ 453 (534)
++|++|+|+++++||++||+|+|.++++++++++++++|+|++++++|+||+|+.+.+..+. ++.|+|+ ++++++|+
T Consensus 870 lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ 946 (1044)
T PLN02915 870 VLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPP 946 (1044)
T ss_pred HHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHH
Confidence 99999999999999999999999999999999999999999999999999999886554332 4789999 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHh
Q 009443 454 VSLMILNVAALVCGVIRMIAV--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 454 ~~l~~l~l~alv~g~~~~~~~--g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~ 528 (534)
++++++|++|+++|++++++. +.|+.+++++++++|+++|++||++||++|+ +|+|+++++||++||++|+++
T Consensus 947 ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll 1021 (1044)
T PLN02915 947 TTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLV 1021 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHH
Confidence 999999999999999999863 4678899999999999999999999999996 799999999999999999985
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.6e-125 Score=1040.20 Aligned_cols=511 Identities=38% Similarity=0.757 Sum_probs=469.8
Q ss_pred hHHHHhHhhhcCC--------------------CCCcccCcceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCC
Q 009443 2 FEEQVMKAVEDGE--------------------YGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHL 61 (534)
Q Consensus 2 ~~~~~~~~~~~~~--------------------~~~~~dh~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~ 61 (534)
|+.|||.++++|. +.+++|||+||||++|++++. |.++.++|+++|++|||||+++
T Consensus 203 ~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~----d~~g~~lP~lvYvsReKrp~~~ 278 (734)
T PLN02893 203 MKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK----DITGHTMPNLIYVSREKSKNSP 278 (734)
T ss_pred HHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCcc----chhhccCCceEEEeCCCCCCCC
Confidence 7899997764433 357899999999999998764 5577889999999999999999
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHh
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSG 141 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f 141 (534)
||+||||||+++|+|+.+||||||+|+||||++|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++|
T Consensus 279 Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vf 358 (734)
T PLN02893 279 HHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRL 358 (734)
T ss_pred cccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcc
Q 009443 142 YRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEV 221 (534)
Q Consensus 142 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~ 221 (534)
|+++++|+||+|||+||||||+|||+||||.+..... +..+.++.+. .......+++++++|++
T Consensus 359 f~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~ 422 (734)
T PLN02893 359 FQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLIL---PEIPELNPDH-------------LVDKSIKSQEVLALAHH 422 (734)
T ss_pred HHHHhhcccccCCceeeccceEEEHHHhcCCCccccc---hhhhhccccc-------------ccccccchHHHHHHhhh
Confidence 9999999999999999999999999999995432100 0111111111 11122346789999999
Q ss_pred ccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhc
Q 009443 222 LASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRF 301 (534)
Q Consensus 222 v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~ 301 (534)
|++|.||++|.||+++||.|+|+|||++||++||++||||+||+|+++++.|++|+|+.+++.||+|||+|++||+++|+
T Consensus 423 v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~ 502 (734)
T PLN02893 423 VAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKY 502 (734)
T ss_pred ccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred CCcccCCcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhC
Q 009443 302 CPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTG 381 (534)
Q Consensus 302 ~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g 381 (534)
||++.+.++|++.||++|++.++|| ++++|.++|+++|++||++|++++|+.+.+|++++++++++++++.++|++|+|
T Consensus 503 nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG 581 (734)
T PLN02893 503 SPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSG 581 (734)
T ss_pred CchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999766899999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHH
Q 009443 382 GSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNV 461 (534)
Q Consensus 382 ~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l 461 (534)
.++++|||+||+|++.++++++++++++++|++|+++.+|+||+|+.++++.++|++|.|+|+.++++++|+++++++|+
T Consensus 582 ~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl 661 (734)
T PLN02893 582 GTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINL 661 (734)
T ss_pred ccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998887788999999999977999999999999999
Q ss_pred HHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHHHHHHHhhhccc
Q 009443 462 AALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL 533 (534)
Q Consensus 462 ~alv~g~~~~~~~g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 533 (534)
+|+++|+++++..+.++++++++++++|++++++|+++|+++||||||||+++++||++||++++...++++
T Consensus 662 ~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~ 733 (734)
T PLN02893 662 VSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASSFAF 733 (734)
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhc
Confidence 999999999986566788899999999999999999999999999999999999999999999999998875
No 10
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=6.2e-126 Score=1063.21 Aligned_cols=507 Identities=29% Similarity=0.567 Sum_probs=457.4
Q ss_pred CCCcccCcceEEEEECCCCCh--------hhhHHh--hhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCE
Q 009443 15 YGNSRNHSTIIEIIQDTSGEN--------ETIRQA--DLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPY 84 (534)
Q Consensus 15 ~~~~~dh~~~i~vi~~~~~~~--------~~~~~~--~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~ 84 (534)
+.+++|||+||||++|+++++ +...|. .+.++|+++||+|||||+++||+||||||+++|+|+++|||||
T Consensus 543 ~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPf 622 (1135)
T PLN02248 543 DHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPF 622 (1135)
T ss_pred CCCCCCCcceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCe
Confidence 358899999999999876522 122332 3458999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeee
Q 009443 85 ILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYI 164 (534)
Q Consensus 85 Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~ 164 (534)
|+|+|||||+|||++++++||||+||+ ++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|
T Consensus 623 ILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCff 701 (1135)
T PLN02248 623 ILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLF 701 (1135)
T ss_pred EEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCcee
Confidence 999999999999999999999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred eccccCC-CccccC-------------------------------c----chHhhhhhhcCchhHHhhhhhhcc-cccc-
Q 009443 165 RRESLYG-NFKHKG-------------------------------I----DLAELKDTFGESNLFIKSLHQSYE-HKNV- 206 (534)
Q Consensus 165 RR~aL~~-~~~~~~-------------------------------~----d~~~~~~~~~~~~~~i~s~~~~~~-~~~~- 206 (534)
||+|||| .|++.. . +...+.++||+|.+|++|+..+.. +++.
T Consensus 702 RR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~ 781 (1135)
T PLN02248 702 RRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLA 781 (1135)
T ss_pred eehhhcCcCCcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccc
Confidence 9999999 454320 0 012345699999999999966542 2111
Q ss_pred ----------------CCccchhhHHhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCc
Q 009443 207 ----------------NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ 270 (534)
Q Consensus 207 ----------------~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~ 270 (534)
+....+.+.++||++|++|.||++|+||+||||.|+|+|||+.||++||++||||+||+|++++
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~A 861 (1135)
T PLN02248 782 DHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDA 861 (1135)
T ss_pred cccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHh
Confidence 2334577899999999999999999999999999999999999999999999999999888899
Q ss_pred eeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCc
Q 009443 271 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPL 350 (534)
Q Consensus 271 ~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~ 350 (534)
|.|+||+|+.++++||+|||+|++||++++++|++.+ ++|++.|||+|+++++|| +.++|.++|+++|++||++|+++
T Consensus 862 F~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~ 939 (1135)
T PLN02248 862 FRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFI 939 (1135)
T ss_pred hcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999998864 799999999999999999 99999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcch
Q 009443 351 YPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDN 430 (534)
Q Consensus 351 ~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~ 430 (534)
+|+.+..++.++++++++++++.++|++|+|++.++|||+||+|+|.++++++++++++++|++++++++|.||+|+.++
T Consensus 940 ~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~ 1019 (1135)
T PLN02248 940 VQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGD 1019 (1135)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccc
Confidence 99875444445556677888999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 009443 431 EQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV--GNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKG 508 (534)
Q Consensus 431 ~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~--g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~ 508 (534)
+..++| ++.|+|+ ++++++|+++++++|++|+++|++|++.. +.|+.+++++++++|+++|++||++||++| |+
T Consensus 1020 d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~g 1095 (1135)
T PLN02248 1020 DEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RG 1095 (1135)
T ss_pred cccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CC
Confidence 766677 6899999 88999999999999999999999999853 346788999999999999999999999999 88
Q ss_pred CCChhHHHHHHHHHHHHHHh
Q 009443 509 RISPSAILLSSVFFVTFLFF 528 (534)
Q Consensus 509 ~~P~~~~~~s~~~~~~~~~~ 528 (534)
|+|++|++||++++++++++
T Consensus 1096 r~P~iv~v~s~ll~~~~sll 1115 (1135)
T PLN02248 1096 RTPTIVYVWSGLLSITISLL 1115 (1135)
T ss_pred CCCeehHHHHHHHHHHHHHH
Confidence 99999999999999999985
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-56 Score=507.42 Aligned_cols=388 Identities=25% Similarity=0.341 Sum_probs=298.6
Q ss_pred CcccCcc-eEE--EEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 009443 17 NSRNHST-IIE--IIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 93 (534)
Q Consensus 17 ~~~dh~~-~i~--vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~ 93 (534)
..+|||. .++ |++|++.|+. .+. .++ .++.|++|++| .|+||||+|+|+++ ++||||+++|||++
T Consensus 284 l~~dYP~~k~EViVVDDgS~D~t--~~l-a~~-~~v~yI~R~~n----~~gKAGnLN~aL~~----a~GEyIavlDAD~i 351 (852)
T PRK11498 284 LGIDWPKDKLNIWILDDGGREEF--RQF-AQE-VGVKYIARPTH----EHAKAGNINNALKY----AKGEFVAIFDCDHV 351 (852)
T ss_pred HhccCCCCceEEEEEeCCCChHH--HHH-HHH-CCcEEEEeCCC----CcchHHHHHHHHHh----CCCCEEEEECCCCC
Confidence 4678885 233 4445554432 111 112 37999999876 58999999999999 99999999999996
Q ss_pred CCchHHHHHHHHHh-cCCCCCCceEEEcCCccccCCCccc-------hHHHHHHHhhhhhHhhhhhcCCcccccceeeee
Q 009443 94 CNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHD-------IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIR 165 (534)
Q Consensus 94 ~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq~f~n~~~~d-------~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~R 165 (534)
++|++|++++++| .||+ +|+||+||.|+|.++-+ ...++.+.||+.++.|++.++++++||+++++|
T Consensus 352 -p~pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviR 426 (852)
T PRK11498 352 -PTRSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIR 426 (852)
T ss_pred -CChHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeE
Confidence 7899999999986 5666 99999999999863211 112345678999999999999999999999999
Q ss_pred ccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcc
Q 009443 166 RESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSV 244 (534)
Q Consensus 166 R~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~sv 244 (534)
|+++ +++ ||+++++
T Consensus 427 ReaL-----------------------------------------------------------------eeVGGfd~~ti 441 (852)
T PRK11498 427 RKPL-----------------------------------------------------------------DEIGGIAVETV 441 (852)
T ss_pred HHHH-----------------------------------------------------------------HHhcCCCCCcc
Confidence 9999 577 5999999
Q ss_pred cchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhH
Q 009443 245 SEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSL 324 (534)
Q Consensus 245 tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~ 324 (534)
|||+++++++|++||+++|+++ +.+.|++|+|+.++++||.||++|++|+++ +++|++ .+++++.||++|+++++
T Consensus 442 tED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWarG~lQi~r-~~~pl~--~~gL~~~qRl~y~~~~l 516 (852)
T PRK11498 442 TEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWARGMVQIFR-LDNPLT--GKGLKLAQRLCYANAML 516 (852)
T ss_pred CccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHHHHHHHHHH-HhChhc--cCCCCHHHHHHHHHHHH
Confidence 9999999999999999999987 678999999999999999999999999987 678987 47999999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHH
Q 009443 325 FPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFY 404 (534)
Q Consensus 325 ~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~ 404 (534)
|+ +.++|.++|+++|++|+++|+.++.+. +..++++++..+....+.+...+|.....||++ +++++.++ +
T Consensus 517 ~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a~---~~~i~~y~lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~-~ 587 (852)
T PRK11498 517 HF-LSGIPRLIFLTAPLAFLLLHAYIIYAP---ALMIALFVLPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAW-Y 587 (852)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCChheeCC---hHHHHHHHHHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHH-H
Confidence 98 999999999999999999999988542 222232222122223333444456666788988 56666454 4
Q ss_pred HHHHHHHHHHcCcccceeeccCCcchhhhhhhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch---HHH
Q 009443 405 GSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWD---KLF 481 (534)
Q Consensus 405 ~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g~~~---~~~ 481 (534)
.....+..++++++.+|+||||++..++ +.|+|+ +..|+++++++|++|+++|++++.. |..+ ...
T Consensus 588 l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~~~P~~~L~~L~l~gl~~g~~r~~~-~~~~~~~~~~ 656 (852)
T PRK11498 588 IAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV----ISRPYIFLVLLNLVGVAVGIWRYFY-GPPNEILTVI 656 (852)
T ss_pred HHHHHHHHHcCccCCCcccCCCCccccc------cceehH----HHHHHHHHHHHHHHHHHHHHHHHHh-CCcccchhhh
Confidence 5555666789999999999999876554 456654 5779999999999999999999874 4322 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 009443 482 AQVLLSLYILIINFAIVEGMIVRKDKGRIS 511 (534)
Q Consensus 482 ~~l~~~~w~~~~l~p~~~al~~r~~~~~~P 511 (534)
.+++|++++++.+...+.+.+.++++++-|
T Consensus 657 ~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 657 VSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 455555555555555555555555544444
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=4.7e-56 Score=503.31 Aligned_cols=363 Identities=25% Similarity=0.329 Sum_probs=297.7
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCccc
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKF 125 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f 125 (534)
.++.|++|++| +|+||||||+|+++ ++||||+++|||++ ++|++|++++++|. ||+ +++||+||.|
T Consensus 202 ~~v~yi~r~~n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v-~~pd~L~~~v~~f~~dp~----v~~Vqtp~~f 268 (713)
T TIGR03030 202 LGVNYITRPRN----VHAKAGNINNALKH----TDGELILIFDADHV-PTRDFLQRTVGWFVEDPK----LFLVQTPHFF 268 (713)
T ss_pred cCcEEEECCCC----CCCChHHHHHHHHh----cCCCEEEEECCCCC-cChhHHHHHHHHHHhCCC----EEEEeCCeec
Confidence 48999999887 68999999999999 99999999999996 67999999999995 665 9999999999
Q ss_pred cCCCcc-------chHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhh
Q 009443 126 HNFNEH-------DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 198 (534)
Q Consensus 126 ~n~~~~-------d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~ 198 (534)
+|.++- +...++...||+.++.|++.++++++||+|+++||+++
T Consensus 269 ~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al----------------------------- 319 (713)
T TIGR03030 269 VSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREAL----------------------------- 319 (713)
T ss_pred cCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHH-----------------------------
Confidence 986421 22335567899999999999999999999999999999
Q ss_pred hhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCC
Q 009443 199 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 277 (534)
Q Consensus 199 ~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~ 277 (534)
+++ ||++++++||++++++||++||+++|+++ +.+.|++|+
T Consensus 320 ------------------------------------~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~ 361 (713)
T TIGR03030 320 ------------------------------------DEIGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPE 361 (713)
T ss_pred ------------------------------------HHcCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCC
Confidence 567 59999999999999999999999999997 678999999
Q ss_pred CHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchh
Q 009443 278 NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSP 357 (534)
Q Consensus 278 ~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~~~~ 357 (534)
|++++++||.||++|++|+++ ..+|++ .+++++.||++|+++++|+ +.+++.++|+++|++++++|++++++....
T Consensus 362 sl~~~~~Qr~RWa~G~~qi~~-~~~pl~--~~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~ 437 (713)
T TIGR03030 362 TLSGHIGQRIRWAQGMMQIFR-LDNPLL--KRGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVASALE 437 (713)
T ss_pred CHHHHHHHHHHHhcChHHHHh-hhCccc--cCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCCHHH
Confidence 999999999999999999987 558887 4799999999999999999 899999999999999999999999764222
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcchhhhhhh
Q 009443 358 FFMVFSFIFLSAICKHLQE-VISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRY 436 (534)
Q Consensus 358 ~~~~~~~l~~~~~~~~ll~-~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y 436 (534)
++.++++ +++.+++. ....|.....||++ +++++ ..++....++.+++++++.+|+||||++..++.
T Consensus 438 ~~~~~lp----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~--- 505 (713)
T TIGR03030 438 ILAYALP----HMLHSLLTNSYLFGRVRWPFWSE----VYETV-LAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED--- 505 (713)
T ss_pred HHHHHHH----HHHHHHHHHHHHcCCeecchHHH----HHHHH-HHHHHHHHHHHHHhCcCCCCceecCCCcccccc---
Confidence 2333332 22333443 33456667789988 55555 445788888889999999999999999765431
Q ss_pred cccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChh
Q 009443 437 EMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGN-WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 513 (534)
Q Consensus 437 ~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g~-~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~ 513 (534)
. .++++.|+++++++|++|+++|+++.+..+. .+.+..+++|++++++.+...+.+.+.|+++++-|+.
T Consensus 506 ---~-----~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~Rv 575 (713)
T TIGR03030 506 ---Y-----FSPLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPRI 575 (713)
T ss_pred ---c-----cchHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCcccE
Confidence 1 2378999999999999999999999874221 2345566666666666666667777778888876653
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.98 E-value=5.2e-30 Score=287.60 Aligned_cols=222 Identities=17% Similarity=0.160 Sum_probs=170.2
Q ss_pred CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCcc
Q 009443 46 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQK 124 (534)
Q Consensus 46 ~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~ 124 (534)
.+++.|.+|++| .|+||||+|++++..+ .++|||+++|||++ ++||++++++++|. ||+ +|.||+|+.
T Consensus 191 ~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~-m~~d~L~~lv~~m~~dP~----vGlVQt~~~ 259 (691)
T PRK05454 191 EGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSL-MSGDTLVRLVRLMEANPR----AGLIQTLPV 259 (691)
T ss_pred CCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCC-CCHHHHHHHHHHHhhCcC----EEEEeCCcc
Confidence 458999999887 5789999999999966 67899999999997 55999999999986 775 999999999
Q ss_pred ccCCCccchHHHHHH----HhhhhhHhhhhhcC--CcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhh
Q 009443 125 FHNFNEHDIYDGSLR----SGYRLQWPGMDGLK--GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 198 (534)
Q Consensus 125 f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~ 198 (534)
+.|.+ ..+++-+. ++......|.+.++ ...|+|+|+++||+|+..
T Consensus 260 ~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~--------------------------- 310 (691)
T PRK05454 260 AVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE--------------------------- 310 (691)
T ss_pred CcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH---------------------------
Confidence 98863 44554332 33344567887766 356899999999999931
Q ss_pred hhccccccCCccchhhHHhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCC
Q 009443 199 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTN 278 (534)
Q Consensus 199 ~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~ 278 (534)
+|+.+.= ....||..++++||+++|.+|+++|||++|+++. +.+++++|+|
T Consensus 311 -------------------------~~glp~L---~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~-~~~~ee~P~t 361 (691)
T PRK05454 311 -------------------------HCGLPPL---PGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL-PGSYEELPPN 361 (691)
T ss_pred -------------------------hcCCccc---cccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc-ccccccCCCC
Confidence 1111000 0123688899999999999999999999999873 4679999999
Q ss_pred HHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHhhHHhHH-HHHHHHHHHHHH
Q 009443 279 LNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCL-PLWCFATLPQLC 343 (534)
Q Consensus 279 l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~-~~l~y~~~P~~~ 343 (534)
+.++.+||.||++|++|++. . +. .+++++.+|++|++..+.+ +.++ +.++.++.|++.
T Consensus 362 l~~~~~qr~RW~~G~lQ~l~-~---l~--~~gl~~~~R~~~l~g~~~y-l~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 362 LLDELKRDRRWCQGNLQHLR-L---LL--AKGLHPVSRLHFLTGIMSY-LSAPLWLLFLLLGTALA 420 (691)
T ss_pred HHHHHHHHHHHHhchHHHHH-H---HH--hcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 2 22 3789999999988756555 4443 333344444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.97 E-value=2.3e-30 Score=260.09 Aligned_cols=180 Identities=18% Similarity=0.247 Sum_probs=145.4
Q ss_pred CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCcc
Q 009443 46 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQK 124 (534)
Q Consensus 46 ~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~ 124 (534)
.++++|++|+++ .|+||||||+++...+ +++|||+++|||++ ++|++|++++.+|. ||+ +|+||+|+.
T Consensus 66 ~~~v~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~-~~p~~l~~~v~~~~~~~~----vg~vq~~~~ 134 (254)
T cd04191 66 QGRIYYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSL-MSGDTIVRLVRRMEANPR----AGIIQTAPK 134 (254)
T ss_pred CCcEEEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCC-CCHHHHHHHHHHHHhCCC----EEEEeCCce
Confidence 678999999988 5899999999998744 68899999999996 66999999999996 776 999999999
Q ss_pred ccCCCccchHHHH----HHHhhhhhHhhhhhcCC--cccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhh
Q 009443 125 FHNFNEHDIYDGS----LRSGYRLQWPGMDGLKG--PFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 198 (534)
Q Consensus 125 f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~ 198 (534)
+.|.+ ..+.+- ...|...++.|++.+++ .+|+|+++++||+||..
T Consensus 135 ~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~--------------------------- 185 (254)
T cd04191 135 LIGAE--TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFME--------------------------- 185 (254)
T ss_pred eECCC--CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHH---------------------------
Confidence 99863 233332 23455567778877643 57899999999999921
Q ss_pred hhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCC
Q 009443 199 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 277 (534)
Q Consensus 199 ~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~ 277 (534)
.|..+ .- .+. ||..++++||+++|++++.+||+++|.++. ..+.+.+|+
T Consensus 186 -------------------------~~~~~---~i-~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~ 235 (254)
T cd04191 186 -------------------------HCALP---VL-PGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPP 235 (254)
T ss_pred -------------------------hcCCc---cc-cCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCC
Confidence 00000 00 123 588899999999999999999999999873 335899999
Q ss_pred CHHHHHHhhhhcccccch
Q 009443 278 NLNDVLIQGTRWASGLID 295 (534)
Q Consensus 278 ~l~~~l~Qr~RWa~G~~q 295 (534)
|+.++++||.||++|++|
T Consensus 236 ~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 236 TLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CHHHHHHHHHHHHhhcCc
Confidence 999999999999999997
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.96 E-value=9.6e-28 Score=259.05 Aligned_cols=227 Identities=20% Similarity=0.210 Sum_probs=167.2
Q ss_pred CCcccCcceEEE--EECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 009443 16 GNSRNHSTIIEI--IQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM 92 (534)
Q Consensus 16 ~~~~dh~~~i~v--i~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~ 92 (534)
...+|||+ .+| +.|+++|+. ...+....+.|++.++.+++| ++||+|+|.+++. +++||++++|||+
T Consensus 97 ll~q~yp~-~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n-----~Gka~AlN~gl~~----a~~d~iv~lDAD~ 166 (444)
T PRK14583 97 ALAQTYTN-IEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHN-----QGKAIALRMGAAA----ARSEYLVCIDGDA 166 (444)
T ss_pred HHcCCCCC-eEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCC
Confidence 45678886 333 334444432 233344567789988887654 5799999999999 8999999999999
Q ss_pred CCCchHHHHHHHHHhc-CCCCCCceEEEcCCccccCCCccchHHH----HHHHhhhhhHhhhhhcCCcc-cccceeeeec
Q 009443 93 YCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYDG----SLRSGYRLQWPGMDGLKGPF-LTGTGHYIRR 166 (534)
Q Consensus 93 ~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR 166 (534)
+ ++|+++++++..|. || +++.||+.....|. +..++. +...+++.+.++.+..+..+ .+|+++++||
T Consensus 167 ~-~~~d~L~~lv~~~~~~~----~~g~v~g~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr 239 (444)
T PRK14583 167 L-LDKNAVPYLVAPLIANP----RTGAVTGNPRIRTR--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRR 239 (444)
T ss_pred C-cCHHHHHHHHHHHHhCC----CeEEEEccceecCC--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEH
Confidence 6 77999999998875 44 49999998776553 233332 33345556666666666665 4799999999
Q ss_pred cccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCccc
Q 009443 167 ESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVS 245 (534)
Q Consensus 167 ~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svt 245 (534)
+++ +++ ||+.+.++
T Consensus 240 ~al-----------------------------------------------------------------~~vGg~~~~~i~ 254 (444)
T PRK14583 240 RAL-----------------------------------------------------------------ADVGYWSPDMIT 254 (444)
T ss_pred HHH-----------------------------------------------------------------HHcCCCCCCccc
Confidence 999 577 49999999
Q ss_pred chHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHh
Q 009443 246 EDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLF 325 (534)
Q Consensus 246 ED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~ 325 (534)
||+++++|++.+||++.|+++ +.+++++|+|+.++++||.||++|.+|+++++...++....+..+.+-+.|+...+|
T Consensus 255 ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (444)
T PRK14583 255 EDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRLRWAQGGAEVFLKNMFKLWRWRNRRMWLLFLEYSLSITW 332 (444)
T ss_pred ccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHhCcccccHHHHHHHHHHHHHH
Confidence 999999999999999999997 688999999999999999999999999998533332211112223333455554555
Q ss_pred h
Q 009443 326 P 326 (534)
Q Consensus 326 ~ 326 (534)
.
T Consensus 333 ~ 333 (444)
T PRK14583 333 A 333 (444)
T ss_pred H
Confidence 4
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=1.1e-27 Score=255.58 Aligned_cols=206 Identities=24% Similarity=0.286 Sum_probs=157.1
Q ss_pred CCCcccCcc-eEEEEECCCCChh-hhHHhhhhcC-CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 15 YGNSRNHST-IIEIIQDTSGENE-TIRQADLVEM-PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 15 ~~~~~dh~~-~i~vi~~~~~~~~-~~~~~~~~~~-p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
+..++|||. .+-|+.|++.|+. +++.....+. |.++.+..++ ++++|++|+|.++.. +++|+|+++|||
T Consensus 76 s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD 147 (439)
T COG1215 76 SLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDAD 147 (439)
T ss_pred HHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccc----cCccchHHHHHHHhh----cCCCEEEEEcCC
Confidence 446899997 3334445455442 3555566666 5766663312 268999999999999 889999999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhh-----hHhhhhhcCCcccccceeeeec
Q 009443 92 MYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL-----QWPGMDGLKGPFLTGTGHYIRR 166 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~-----~~~g~d~~~~~~~~Gtg~~~RR 166 (534)
++ ++||+|++++.+|.|+.. .+.+|.|+.+.+.+....++..+...|.. ...+.+.....+++|+++++||
T Consensus 148 ~~-~~~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr 223 (439)
T COG1215 148 TV-PEPDALRELVSPFEDPPV---GAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRR 223 (439)
T ss_pred CC-CChhHHHHHHhhhcCCCe---eEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEH
Confidence 96 779999999999997763 37899999887653212222222222222 2222233346678999999999
Q ss_pred cccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccc-cCCCccc
Q 009443 167 ESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG-FSYQSVS 245 (534)
Q Consensus 167 ~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG-~~~~svt 245 (534)
++| +++| |...++|
T Consensus 224 ~aL-----------------------------------------------------------------~~~g~~~~~~i~ 238 (439)
T COG1215 224 SAL-----------------------------------------------------------------EEVGGWLEDTIT 238 (439)
T ss_pred HHH-----------------------------------------------------------------HHhCCCCCCcee
Confidence 999 5665 9999999
Q ss_pred chHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhh
Q 009443 246 EDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSIS 299 (534)
Q Consensus 246 ED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~ 299 (534)
||.++++++|.+|||+.|+++ +.+.+++|+|+.++++||.||++|.+|++..
T Consensus 239 ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 239 EDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred ccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 999999999999999999998 6899999999999999999999999999974
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=3.1e-26 Score=244.81 Aligned_cols=202 Identities=22% Similarity=0.245 Sum_probs=156.0
Q ss_pred CCcccCcc-eEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 009443 16 GNSRNHST-IIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 93 (534)
Q Consensus 16 ~~~~dh~~-~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~ 93 (534)
...++||. .|-|+.|+++|+. ...+....+.|++.++.+++| .+||+|+|.+++. +++||++++|||.+
T Consensus 76 l~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~ 146 (420)
T PRK11204 76 LLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDAL 146 (420)
T ss_pred HHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 35678885 3334445555542 233445567889999987655 4799999999999 89999999999996
Q ss_pred CCchHHHHHHHHHhc-CCCCCCceEEEcCCccccCCCccchHHHHH----HHhhhhhHhhhhhcCCcc-cccceeeeecc
Q 009443 94 CNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYDGSL----RSGYRLQWPGMDGLKGPF-LTGTGHYIRRE 167 (534)
Q Consensus 94 ~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~ 167 (534)
++|+++++++..|. ||+ ++.||+.....|. +...+..+ ...++...++....+... .+|+++++||+
T Consensus 147 -~~~d~L~~l~~~~~~~~~----v~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~ 219 (420)
T PRK11204 147 -LDPDAAAYMVEHFLHNPR----VGAVTGNPRIRNR--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKS 219 (420)
T ss_pred -CChhHHHHHHHHHHhCCC----eEEEECCceeccc--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHH
Confidence 67999999999984 554 9999998776653 22333222 223333344444444444 47999999999
Q ss_pred ccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccc
Q 009443 168 SLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSE 246 (534)
Q Consensus 168 aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtE 246 (534)
++ +++ ||+++.++|
T Consensus 220 ~l-----------------------------------------------------------------~~vgg~~~~~~~E 234 (420)
T PRK11204 220 AL-----------------------------------------------------------------HEVGYWSTDMITE 234 (420)
T ss_pred HH-----------------------------------------------------------------HHhCCCCCCcccc
Confidence 99 566 599999999
Q ss_pred hHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhh
Q 009443 247 DFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISR 300 (534)
Q Consensus 247 D~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~ 300 (534)
|+++++|++.+||++.|+|+ +.++++.|+|++++.+||.||++|.+|.++++
T Consensus 235 D~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 235 DIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGLWKQRLRWAQGGAEVLLKN 286 (420)
T ss_pred hHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999999999999998 68899999999999999999999999999843
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.94 E-value=7.4e-25 Score=236.35 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=169.9
Q ss_pred CCcccCcc-eEE--EEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 16 GNSRNHST-IIE--IIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 16 ~~~~dh~~-~i~--vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
...|++|. .++ |+.|+++|+. .+......+.|++..+..++ .++||+|+|+|++. +++|||+++|||
T Consensus 71 l~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD 141 (439)
T TIGR03111 71 IYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSD 141 (439)
T ss_pred HHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCC
Confidence 45688886 234 3445554432 22233455678766554433 36899999999999 899999999999
Q ss_pred CCCCchHHHHHHHHHhc-CCCCCCceEEEcCCccccCC--C-ccch---HHHHHHHhhhhh---Hhhh---hhcCCcc-c
Q 009443 92 MYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNF--N-EHDI---YDGSLRSGYRLQ---WPGM---DGLKGPF-L 157 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~n~--~-~~d~---~~~~~~~f~~~~---~~g~---d~~~~~~-~ 157 (534)
++ ++|+++++++..|. ||+ ++.|+..+.-... + .... +.... .+++.. ..|+ ...+..+ +
T Consensus 142 ~~-~~~d~L~~l~~~f~~~~~----v~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~ 215 (439)
T TIGR03111 142 GK-LHKDAIKNMVTRFENNPD----IHAMTGVILTDKELIEKTKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTL 215 (439)
T ss_pred CC-cChHHHHHHHHHHHhCCC----eEEEEeEEecCchhhhhhcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEE
Confidence 96 67999999999986 555 6666544322110 0 0011 11111 112221 1111 2223333 4
Q ss_pred ccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc
Q 009443 158 TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV 237 (534)
Q Consensus 158 ~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v 237 (534)
+|+++++||+++ +++
T Consensus 216 sGa~~~~Rr~~l-----------------------------------------------------------------~~v 230 (439)
T TIGR03111 216 SGAFSAFRRETI-----------------------------------------------------------------LKT 230 (439)
T ss_pred ccHHHhhhHHHH-----------------------------------------------------------------HHh
Confidence 788889999999 456
Q ss_pred -ccCCCcccchHHHHHHHHh-CCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhH
Q 009443 238 -GFSYQSVSEDFFTGFILHC-KGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLL 315 (534)
Q Consensus 238 -G~~~~svtED~~t~~~l~~-~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~q 315 (534)
||+.++++||++++++++. .|++..|+++ +.++..+|+|++++++||.||++|.+|++....++.. .++.++.+
T Consensus 231 ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~--~~~~~~~~ 306 (439)
T TIGR03111 231 QLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESAN--KSIKGFFS 306 (439)
T ss_pred CCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhh--hchhhhhh
Confidence 6999999999999999985 6999999987 6889999999999999999999999999974333333 24566667
Q ss_pred HHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcc
Q 009443 316 SMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLY 351 (534)
Q Consensus 316 rl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~ 351 (534)
+..+....... ...+|..++.++++++.++|.++.
T Consensus 307 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 307 NFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 76554433333 556787888888888887776544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=6.4e-24 Score=231.22 Aligned_cols=236 Identities=16% Similarity=0.086 Sum_probs=156.1
Q ss_pred CcccCcce-EEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCC--CCCC---CEEEEeC
Q 009443 17 NSRNHSTI-IEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGV--ISNS---PYILGLD 89 (534)
Q Consensus 17 ~~~dh~~~-i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~--~s~g---~~Il~lD 89 (534)
..+|||.. |-|+.|+++++. ...+....++|+++.+.- ++++ .++||+|||.+++.... ...| |+|+++|
T Consensus 90 ~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~-~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~D 166 (504)
T PRK14716 90 ATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIV-PHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHD 166 (504)
T ss_pred HcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEe-CCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEc
Confidence 45788763 334444444432 233344667898876552 2332 36899999999976310 0244 9999999
Q ss_pred CCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHH----HHHHhhhhhHhhhhhcCCcc-cccceeee
Q 009443 90 CDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG----SLRSGYRLQWPGMDGLKGPF-LTGTGHYI 164 (534)
Q Consensus 90 aD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~ 164 (534)
||++ ++|++|+.....+.| .++||.|....+.+.+...+. +....+...+..++.+++++ ++|+|+++
T Consensus 167 AD~~-v~Pd~Lr~~~~~~~~------~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~af 239 (504)
T PRK14716 167 AEDV-IHPLELRLYNYLLPR------HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAF 239 (504)
T ss_pred CCCC-cCccHHHHHHhhcCC------CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEe
Confidence 9996 679999876544433 467899987665432222222 12222333456778888875 68999999
Q ss_pred eccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCc
Q 009443 165 RRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQS 243 (534)
Q Consensus 165 RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~s 243 (534)
||++|. ++ .++ ... +|+.++
T Consensus 240 RR~aLe-----------~l--------------------------------~~~----------------~GG~~fd~~s 260 (504)
T PRK14716 240 SRRALE-----------RL--------------------------------AAE----------------RGGQPFDSDS 260 (504)
T ss_pred EHHHHH-----------HH--------------------------------Hhh----------------cCCCCCCCCC
Confidence 999991 00 000 011 399999
Q ss_pred ccchHHHHHHHHhCCCEEEEeCCCC-------------CceeeccCCCHHHHHHhhhhccccc-chhhhhhc--CCcccC
Q 009443 244 VSEDFFTGFILHCKGWTSTYLDPSR-------------PQFLGTSTTNLNDVLIQGTRWASGL-IDVSISRF--CPLLYG 307 (534)
Q Consensus 244 vtED~~t~~~l~~~Gwrs~y~~~~~-------------~~~~g~aP~~l~~~l~Qr~RWa~G~-~qi~~~~~--~p~~~~ 307 (534)
+|||+++|++++.+|||++|++... .+.++++|+|++++++||.||+.|. +|...+.- .++.
T Consensus 261 LTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~-- 338 (504)
T PRK14716 261 LTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA-- 338 (504)
T ss_pred cchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--
Confidence 9999999999999999999998731 1345889999999999999999995 78764211 1111
Q ss_pred CcccchhHHHHHHhHh
Q 009443 308 PSRMSLLLSMCYGEMS 323 (534)
Q Consensus 308 ~~~l~~~qrl~Y~~~~ 323 (534)
.+.+.+++|..-+...
T Consensus 339 ~~~~~~rdr~~~~~~~ 354 (504)
T PRK14716 339 TKYMLWRDRKGLLTNL 354 (504)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 2456677887665533
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.91 E-value=7.6e-23 Score=231.10 Aligned_cols=212 Identities=18% Similarity=0.199 Sum_probs=145.8
Q ss_pred cccCcceEEEEEC-CCCChhh--hHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCC-----CCCCEEEEeC
Q 009443 18 SRNHSTIIEIIQD-TSGENET--IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI-----SNSPYILGLD 89 (534)
Q Consensus 18 ~~dh~~~i~vi~~-~~~~~~~--~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~-----s~g~~Il~lD 89 (534)
.+|||+ .+|+.. +.+|+++ ..+....++|+++.+..++ |+ .++||+|||+++...-.. ...+.++++|
T Consensus 88 ~ldYP~-~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~D 163 (727)
T PRK11234 88 TLDYEN-YHIFVGTYPNDPATQADVDAVCARFPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHD 163 (727)
T ss_pred hCCCCC-eEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEc
Confidence 689999 566653 2333333 3344456789876554333 33 368999999999984111 2346788899
Q ss_pred CCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHH----HHHHHhhhhhHhhhhhcCCcc-cccceeee
Q 009443 90 CDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD----GSLRSGYRLQWPGMDGLKGPF-LTGTGHYI 164 (534)
Q Consensus 90 aD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~ 164 (534)
||.+ ++|++|+ .+.++.++. ++||.|....+.+.+...+ .+....+...+++++.++++. +.|+|++|
T Consensus 164 AD~~-v~pd~L~-~~~~l~~~~-----~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af 236 (727)
T PRK11234 164 AEDV-ISPMELR-LFNYLVERK-----DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCF 236 (727)
T ss_pred CCCC-CChhHHH-HHHhhcCCC-----CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEE
Confidence 9996 6799997 677887543 8899996643322222222 233333446678899998765 68999999
Q ss_pred eccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcc
Q 009443 165 RRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV 244 (534)
Q Consensus 165 RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~sv 244 (534)
+|+++. .+ ++ .|...||+.+++
T Consensus 237 ~Rr~l~-----------al--------------------------------~~---------------~ggg~~~~~~~l 258 (727)
T PRK11234 237 SRRAVT-----------AL--------------------------------LE---------------DGDGIAFDVQSL 258 (727)
T ss_pred ecccHH-----------HH--------------------------------HH---------------hcCCCCcCCCcc
Confidence 555430 00 00 001225999999
Q ss_pred cchHHHHHHHHhCCCEEEEeCCC---------------------CCceeeccCCCHHHHHHhhhhcccc-cchhhh
Q 009443 245 SEDFFTGFILHCKGWTSTYLDPS---------------------RPQFLGTSTTNLNDVLIQGTRWASG-LIDVSI 298 (534)
Q Consensus 245 tED~~t~~~l~~~Gwrs~y~~~~---------------------~~~~~g~aP~~l~~~l~Qr~RWa~G-~~qi~~ 298 (534)
|||+++|++|+.+||++.|++.. ...+++..|+|++++.+||.||..| .+|.+.
T Consensus 259 TED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 259 TEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred hHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 99999999999999999999821 1337788999999999999999999 577764
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.90 E-value=4.2e-23 Score=202.35 Aligned_cols=196 Identities=22% Similarity=0.321 Sum_probs=144.8
Q ss_pred CcccCcc-eEEE-EECCCCChhh-hHHhhh----hcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeC
Q 009443 17 NSRNHST-IIEI-IQDTSGENET-IRQADL----VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLD 89 (534)
Q Consensus 17 ~~~dh~~-~i~v-i~~~~~~~~~-~~~~~~----~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lD 89 (534)
..|++|. .++| +.|++.|+.. +..... ...+.+.++.+.++ .++|++|+|.+++. ++||||+++|
T Consensus 24 ~~q~~~~~~~eIiVvD~s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~D 95 (232)
T cd06437 24 CALDYPKDRLEIQVLDDSTDETVRLAREIVEEYAAQGVNIKHVRRADR----TGYKAGALAEGMKV----AKGEYVAIFD 95 (232)
T ss_pred HhcCCCccceEEEEEECCCCcHHHHHHHHHHHHhhcCCceEEEECCCC----CCCchHHHHHHHHh----CCCCEEEEEc
Confidence 4578875 3333 4466555421 122111 23567888887666 46799999999999 8999999999
Q ss_pred CCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHH----HHHhhhhhHhhhhhcCCc-ccccceeee
Q 009443 90 CDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGS----LRSGYRLQWPGMDGLKGP-FLTGTGHYI 164 (534)
Q Consensus 90 aD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~ 164 (534)
||++ ++|++|+++..++.||+ +++||.+..+.|.+. ..+... ...++...+.+....+.. .++|+++++
T Consensus 96 aD~~-~~~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 169 (232)
T cd06437 96 ADFV-PPPDFLQKTPPYFADPK----LGFVQTRWGHINANY-SLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVW 169 (232)
T ss_pred CCCC-CChHHHHHhhhhhcCCC----eEEEecceeeEcCCC-chhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhh
Confidence 9997 56999999887777665 899998876655422 122111 112344444444444443 358999999
Q ss_pred eccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCc
Q 009443 165 RRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQS 243 (534)
Q Consensus 165 RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~s 243 (534)
||+++ +++ ||+...
T Consensus 170 rr~~~-----------------------------------------------------------------~~vgg~~~~~ 184 (232)
T cd06437 170 RKECI-----------------------------------------------------------------EDAGGWNHDT 184 (232)
T ss_pred hHHHH-----------------------------------------------------------------HHhCCCCCCc
Confidence 99999 566 598888
Q ss_pred ccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhccccc
Q 009443 244 VSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 293 (534)
Q Consensus 244 vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~ 293 (534)
..||++++.|++.+||+..|++. +.++...|+|+.+++.||+||++|.
T Consensus 185 ~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 185 LTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred chhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhccCC
Confidence 99999999999999999999997 6789999999999999999999983
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.90 E-value=1.3e-22 Score=197.30 Aligned_cols=201 Identities=30% Similarity=0.460 Sum_probs=152.9
Q ss_pred CcccCcc---eEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 009443 17 NSRNHST---IIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM 92 (534)
Q Consensus 17 ~~~dh~~---~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~ 92 (534)
..|++|. .|-|+.|++.++. .+........ .++++.++++ .++|+||+|.|++. +++|||+++|+|.
T Consensus 25 ~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~ 95 (234)
T cd06421 25 LAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPDN----RHAKAGNLNNALAH----TTGDFVAILDADH 95 (234)
T ss_pred HhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCCC----CCCcHHHHHHHHHh----CCCCEEEEEcccc
Confidence 3577887 3333333333321 1222222222 5677777655 57899999999999 8999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccc----hHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccc
Q 009443 93 YCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD----IYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRES 168 (534)
Q Consensus 93 ~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~a 168 (534)
+ ++|+++.+++..+.+ +++++.|++++.+.+.+..+ .+......++.....+...++...++|+++++||++
T Consensus 96 ~-~~~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~ 171 (234)
T cd06421 96 V-PTPDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREA 171 (234)
T ss_pred C-cCccHHHHHHHHHhc---CCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHH
Confidence 7 569999999999975 23489999999887664322 122333445556666666667778899999999999
Q ss_pred cCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccch
Q 009443 169 LYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSED 247 (534)
Q Consensus 169 L~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED 247 (534)
+ +++ ||+.....||
T Consensus 172 ~-----------------------------------------------------------------~~ig~~~~~~~~eD 186 (234)
T cd06421 172 L-----------------------------------------------------------------DEIGGFPTDSVTED 186 (234)
T ss_pred H-----------------------------------------------------------------HHhCCCCccceecc
Confidence 9 566 4887889999
Q ss_pred HHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhh
Q 009443 248 FFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVS 297 (534)
Q Consensus 248 ~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~ 297 (534)
++++.+++.+||++.|+++ +.+.+..|+++.++++|+.||..|.+|++
T Consensus 187 ~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 187 LATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred HHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHHHHhcCCeeeC
Confidence 9999999999999999998 57789999999999999999999999864
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.89 E-value=4.6e-22 Score=194.76 Aligned_cols=203 Identities=20% Similarity=0.296 Sum_probs=145.4
Q ss_pred CcccCcceEEEEEC-CCCChhh--hHHhhhhc-CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 009443 17 NSRNHSTIIEIIQD-TSGENET--IRQADLVE-MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM 92 (534)
Q Consensus 17 ~~~dh~~~i~vi~~-~~~~~~~--~~~~~~~~-~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~ 92 (534)
.++++|..--|+.| ++.|+.. .+.....+ -+++.++..+++ .++|+||+|.+++.+. .++|||+++|+|.
T Consensus 22 ~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~ 95 (236)
T cd06435 22 AALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPL----PGAKAGALNYALERTA--PDAEIIAVIDADY 95 (236)
T ss_pred HhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCC
Confidence 45777763223334 4444321 12222222 347888877655 4679999999999843 3589999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHH----HHhhhhhHhhhhhcCCcccccceeeeeccc
Q 009443 93 YCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSL----RSGYRLQWPGMDGLKGPFLTGTGHYIRRES 168 (534)
Q Consensus 93 ~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~a 168 (534)
. .+|++|.+++.+|.+|+ ++.|++++.+.+.. ..++.... ..++......+...+..++.|+++++||++
T Consensus 96 ~-~~~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~ 169 (236)
T cd06435 96 Q-VEPDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSA 169 (236)
T ss_pred C-cCHHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHH
Confidence 7 55999999999987654 89999987665432 22332111 111222222333334456789999999999
Q ss_pred cCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccch
Q 009443 169 LYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSED 247 (534)
Q Consensus 169 L~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED 247 (534)
+ +++ ||+.....||
T Consensus 170 ~-----------------------------------------------------------------~~iGgf~~~~~~eD 184 (236)
T cd06435 170 L-----------------------------------------------------------------DDVGGWDEWCITED 184 (236)
T ss_pred H-----------------------------------------------------------------HHhCCCCCccccch
Confidence 9 567 4988889999
Q ss_pred HHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhh
Q 009443 248 FFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSI 298 (534)
Q Consensus 248 ~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~ 298 (534)
+++++|++.+||+..|+++ +..+...|+++.++.+||.||++|.+|++.
T Consensus 185 ~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~ 233 (236)
T cd06435 185 SELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAYGAVQILK 233 (236)
T ss_pred HHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhcchhhhhh
Confidence 9999999999999999987 567889999999999999999999999986
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.87 E-value=1.8e-21 Score=192.48 Aligned_cols=212 Identities=21% Similarity=0.300 Sum_probs=149.7
Q ss_pred HHHhHhhhcCCCCCcccCcc-eEEE--EECCCCChhh-hHHhhhh-cCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCC
Q 009443 4 EQVMKAVEDGEYGNSRNHST-IIEI--IQDTSGENET-IRQADLV-EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGV 78 (534)
Q Consensus 4 ~~~~~~~~~~~~~~~~dh~~-~i~v--i~~~~~~~~~-~~~~~~~-~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~ 78 (534)
+.|.++++ +...++||. -++| +.|+++|+.. +...... ....++++.+.+ ..+|++|+|.+++.
T Consensus 14 ~~l~~~l~---sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~-----~~G~~~a~n~g~~~--- 82 (241)
T cd06427 14 EVLPQLIA---SLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQ-----PRTKPKACNYALAF--- 82 (241)
T ss_pred HHHHHHHH---HHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCC-----CCchHHHHHHHHHh---
Confidence 34444443 235578875 2444 3455544321 2222111 123444443322 25899999999999
Q ss_pred CCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHH----HHHHHhhhhhHhhhhhcCC
Q 009443 79 ISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYD----GSLRSGYRLQWPGMDGLKG 154 (534)
Q Consensus 79 ~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~----~~~~~f~~~~~~g~d~~~~ 154 (534)
++||||+.+|+|++ .+|+++.+++.+|.+ .++++++||.+..+.+... .... .+....++...++....+.
T Consensus 83 -a~gd~i~~~DaD~~-~~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (241)
T cd06427 83 -ARGEYVVIYDAEDA-PDPDQLKKAVAAFAR--LDDKLACVQAPLNYYNARE-NWLTRMFALEYAAWFDYLLPGLARLGL 157 (241)
T ss_pred -cCCCEEEEEcCCCC-CChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCc-cHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 89999999999997 559999999999863 1245999999887776432 1111 1222334555566666665
Q ss_pred cc-cccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccc
Q 009443 155 PF-LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKW 233 (534)
Q Consensus 155 ~~-~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~w 233 (534)
+. ++|+++++||+++
T Consensus 158 ~~~~~g~~~~~rr~~~---------------------------------------------------------------- 173 (241)
T cd06427 158 PIPLGGTSNHFRTDVL---------------------------------------------------------------- 173 (241)
T ss_pred eeecCCchHHhhHHHH----------------------------------------------------------------
Confidence 54 5789999999999
Q ss_pred cccc-ccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhhhh
Q 009443 234 GEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSIS 299 (534)
Q Consensus 234 g~~v-G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~ 299 (534)
+++ ||+....+||++.++|++.+||+..+++. ...+..|+|+.++++||.||+.|.+|++..
T Consensus 174 -~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 174 -RELGGWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred -HHcCCCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHHHhccHHHHHHH
Confidence 566 58887889999999999999999999975 347889999999999999999999999863
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.86 E-value=1.2e-22 Score=197.69 Aligned_cols=196 Identities=26% Similarity=0.333 Sum_probs=123.2
Q ss_pred CcccCcceEEEEECCCCChh--hhHHhhhhcCCc--EEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 009443 17 NSRNHSTIIEIIQDTSGENE--TIRQADLVEMPL--LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM 92 (534)
Q Consensus 17 ~~~dh~~~i~vi~~~~~~~~--~~~~~~~~~~p~--l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~ 92 (534)
.+++|+.+--+++|++.+++ ...+....++|. +.++.++++++ .++|++|+|.+++. .++|+|+++|+|.
T Consensus 24 ~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~ 97 (228)
T PF13641_consen 24 LAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDT 97 (228)
T ss_dssp TTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSE
T ss_pred HcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCc
Confidence 45667664444455544433 223334456665 58888876542 24799999999999 8899999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhh----hhhHhhhhhcCCcccccceeeeeccc
Q 009443 93 YCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGY----RLQWPGMDGLKGPFLTGTGHYIRRES 168 (534)
Q Consensus 93 ~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~----~~~~~g~d~~~~~~~~Gtg~~~RR~a 168 (534)
+ ++|++|++++.+|.+|+ +++||++..+++. ...+......++ .....+....+.++++|+++++||++
T Consensus 98 ~-~~p~~l~~~~~~~~~~~----~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~ 170 (228)
T PF13641_consen 98 V-LDPDWLERLLAAFADPG----VGAVGGPVFPDND--RNWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSA 170 (228)
T ss_dssp E-E-CHHHHHHHHHHHBSS------EEEEEEEETTC--CCEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHH
T ss_pred E-ECHHHHHHHHHHHHhCC----CCeEeeeEeecCC--CCHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHH
Confidence 7 57999999999997776 8999988866542 222221111121 11233445555667799999999999
Q ss_pred cCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccch
Q 009443 169 LYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSED 247 (534)
Q Consensus 169 L~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED 247 (534)
+ +++ ||+.....||
T Consensus 171 ~-----------------------------------------------------------------~~~g~fd~~~~~eD 185 (228)
T PF13641_consen 171 L-----------------------------------------------------------------EEVGGFDPFILGED 185 (228)
T ss_dssp H-----------------------------------------------------------------HHH-S--SSSSSHH
T ss_pred H-----------------------------------------------------------------HHhCCCCCCCcccH
Confidence 9 567 6888888999
Q ss_pred HHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccc
Q 009443 248 FFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 292 (534)
Q Consensus 248 ~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G 292 (534)
.+++++++.+||++.|++. +.++...|.+++++.+||.||+.|
T Consensus 186 ~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 186 FDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp HHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred HHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 9999999999999999997 678999999999999999999987
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.84 E-value=6.9e-19 Score=197.21 Aligned_cols=212 Identities=17% Similarity=0.142 Sum_probs=148.0
Q ss_pred CcccCcceEEEEE---CCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcC---CCCCCCE--EEEe
Q 009443 17 NSRNHSTIIEIIQ---DTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSG---VISNSPY--ILGL 88 (534)
Q Consensus 17 ~~~dh~~~i~vi~---~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~---~~s~g~~--Il~l 88 (534)
.+.|||.. +|++ +|+++.....+.....+|+++.|..+++ ...+||.|||.++...- ..+.++| |+++
T Consensus 95 ~~ldYp~~-~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~ 170 (703)
T PRK15489 95 ATLDYRRY-VIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILH 170 (703)
T ss_pred hcCCCCCe-EEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEE
Confidence 46799976 5666 3444332333444556898888776433 24689999999998730 1124444 9999
Q ss_pred CCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccc----hHHHHHHHhhhhhHhhhhhcCCcc-cccceee
Q 009443 89 DCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHD----IYDGSLRSGYRLQWPGMDGLKGPF-LTGTGHY 163 (534)
Q Consensus 89 DaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d----~~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~ 163 (534)
|||.+ ++|+.|+. +.++.+.. .+||.|-.-...+.+. .|..+....++..+.++..+++++ ..|||++
T Consensus 171 DAEd~-~~P~~L~~-~~~~~~~~-----~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~ 243 (703)
T PRK15489 171 DSEDV-LHPLELKY-FNYLLPRK-----DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTC 243 (703)
T ss_pred cCCCC-CChhHHHH-HHhhcCCc-----ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCccee
Confidence 99995 88999975 46766322 3589874322111222 234456667788889999999886 5899999
Q ss_pred eeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCc
Q 009443 164 IRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQS 243 (534)
Q Consensus 164 ~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~s 243 (534)
|||++|. +++++. .-.||+.+|
T Consensus 244 frr~aL~-------------------------------------------~l~~~g---------------g~~~~n~~s 265 (703)
T PRK15489 244 FSRRALL-------------------------------------------ALMKER---------------GNQPFNTSS 265 (703)
T ss_pred eeHHHHH-------------------------------------------HHHHhc---------------CCCCCCCCC
Confidence 9999981 111100 012688899
Q ss_pred ccchHHHHHHHHhCCCEEEEeCC---------------------CCCceeeccCCCHHHHHHhhhhcccccc-hhh
Q 009443 244 VSEDFFTGFILHCKGWTSTYLDP---------------------SRPQFLGTSTTNLNDVLIQGTRWASGLI-DVS 297 (534)
Q Consensus 244 vtED~~t~~~l~~~Gwrs~y~~~---------------------~~~~~~g~aP~~l~~~l~Qr~RWa~G~~-qi~ 297 (534)
+|||++.|+||+.+|||+.|+-- ...+.++..|.++.+.++||.||-.|-. |-.
T Consensus 266 LTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 266 LTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred chHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 99999999999999999999321 1256788899999999999999999987 664
No 27
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.82 E-value=2.2e-19 Score=189.92 Aligned_cols=198 Identities=14% Similarity=0.165 Sum_probs=139.1
Q ss_pred CCCcccCcceEEEEE--CCCCChh-hhHHhhhhcCCc--EEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeC
Q 009443 15 YGNSRNHSTIIEIIQ--DTSGENE-TIRQADLVEMPL--LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLD 89 (534)
Q Consensus 15 ~~~~~dh~~~i~vi~--~~~~~~~-~~~~~~~~~~p~--l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lD 89 (534)
+...||||+ .||+. |+++|.. .+......+.|+ ++++..+++.+ .++|++|+|++++. +++|+++++|
T Consensus 62 Sl~~q~Yp~-~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~D 134 (373)
T TIGR03472 62 SFCRQDYPG-FQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIAD 134 (373)
T ss_pred HHHhcCCCC-eEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEEC
Confidence 456899998 56554 3333321 233344556675 77786554433 46799999999998 8999999999
Q ss_pred CCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHH-----hhhhhHhhhhhcCC-cccccceee
Q 009443 90 CDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRS-----GYRLQWPGMDGLKG-PFLTGTGHY 163 (534)
Q Consensus 90 aD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gtg~~ 163 (534)
||.+ ++|++|++++..|.||+ ++.|+++.... +.++....-... |+..... .+..+. .++.|++++
T Consensus 135 aD~~-~~p~~L~~lv~~~~~~~----v~~V~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~a 206 (373)
T TIGR03472 135 SDIS-VGPDYLRQVVAPLADPD----VGLVTCLYRGR--PVPGFWSRLGAMGINHNFLPSVMV-ARALGRARFCFGATMA 206 (373)
T ss_pred CCCC-cChhHHHHHHHHhcCCC----cceEeccccCC--CCCCHHHHHHHHHhhhhhhHHHHH-HHhccCCccccChhhh
Confidence 9997 46999999999998776 88898864322 222222211111 1111111 122233 346899999
Q ss_pred eeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCC-
Q 009443 164 IRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSY- 241 (534)
Q Consensus 164 ~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~- 241 (534)
+||+++ +++ ||+.
T Consensus 207 ~RR~~l-----------------------------------------------------------------~~iGGf~~~ 221 (373)
T TIGR03472 207 LRRATL-----------------------------------------------------------------EAIGGLAAL 221 (373)
T ss_pred eeHHHH-----------------------------------------------------------------HHcCChHHh
Confidence 999999 566 5764
Q ss_pred -CcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccc
Q 009443 242 -QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLI 294 (534)
Q Consensus 242 -~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~ 294 (534)
++++||++++.+++.+||++.|++. +......|+|++++++||.||++..-
T Consensus 222 ~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 222 AHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred cccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHHHHHHHHHHHhhhh
Confidence 5789999999999999999999876 45677778999999999999985543
No 28
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.80 E-value=4.3e-19 Score=169.07 Aligned_cols=136 Identities=31% Similarity=0.452 Sum_probs=111.4
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhh----hHhhhhhcCCc-ccc
Q 009443 84 YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL----QWPGMDGLKGP-FLT 158 (534)
Q Consensus 84 ~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~ 158 (534)
||+++|||+. ++||++++++.++.||+ +++||+|..++|. ++.+.+.+...+.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~-~~~d~l~~~~~~~~~~~----~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTR-LPPDFLERLVAALEDPK----VDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCC-CChHHHHHHHHHHhCCC----ceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 6899999997 55999999999998775 9999999998743 44555444444422 12233445544 468
Q ss_pred cceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-
Q 009443 159 GTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV- 237 (534)
Q Consensus 159 Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v- 237 (534)
|+|.++||+++ +++
T Consensus 74 G~~~~~r~~~l-----------------------------------------------------------------~~vg 88 (193)
T PF13632_consen 74 GSGMLFRREAL-----------------------------------------------------------------REVG 88 (193)
T ss_pred CcceeeeHHHH-----------------------------------------------------------------HHhC
Confidence 99999999999 577
Q ss_pred ccC-CCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhccccc
Q 009443 238 GFS-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGL 293 (534)
Q Consensus 238 G~~-~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~ 293 (534)
||+ ..+++||+++++++..+||+..|+++ +.++..+|+|+.++++||+||+.|.
T Consensus 89 ~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 89 GFDDPFSIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred cccccccccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 699 89999999999999999999999998 4679999999999999999999998
No 29
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.79 E-value=3.9e-19 Score=176.90 Aligned_cols=171 Identities=20% Similarity=0.103 Sum_probs=115.0
Q ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCCceEEEcCCccccCCCccchHHHHHHHhh----
Q 009443 68 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGY---- 142 (534)
Q Consensus 68 aLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~---- 142 (534)
++|.++.. +++|||+++|||++ ++|++|++++.+| .||+ ++.|++.+...|.. ...+..-+..-|
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~-~~~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTK-FDPDSIVQLYKAMDKDPE----IGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCc-CCHhHHHHHHHHHHhCCC----EEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45656655 89999999999997 5699999999998 4665 89999988776542 223332222111
Q ss_pred hhhHhhhhhcCCc-ccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcc
Q 009443 143 RLQWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEV 221 (534)
Q Consensus 143 ~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~ 221 (534)
.....+.+.++.. ++.|+++++|+++|....... ..
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~-------------------------------------------~~ 170 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK-------------------------------------------GP 170 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCcccc-------------------------------------------cc
Confidence 1112233445543 457999999999994310000 00
Q ss_pred cccccccccccccccc-ccCCCcccchHHHHHHHHhCCCEEEE--eCCCCCceeeccCCCHHHHHHhhhhcccccch
Q 009443 222 LASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTY--LDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 295 (534)
Q Consensus 222 v~~c~ye~~t~wg~~v-G~~~~svtED~~t~~~l~~~Gwrs~y--~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~q 295 (534)
...++|...+. ++. +....+++||.+++++|..+||++.| +++ +.++..+|+|+.++++||+||++|++.
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 171 LLDYAYLTNTV--DSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred chhhccccCcc--cchHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00001111111 111 23445789999999999999999999 877 688999999999999999999999863
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.79 E-value=3.4e-18 Score=165.27 Aligned_cols=197 Identities=18% Similarity=0.180 Sum_probs=136.9
Q ss_pred CCcccCcc---eEEEEECCCCChh-hhHH-hhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCC
Q 009443 16 GNSRNHST---IIEIIQDTSGENE-TIRQ-ADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDC 90 (534)
Q Consensus 16 ~~~~dh~~---~i~vi~~~~~~~~-~~~~-~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDa 90 (534)
...|+||+ .|-|+.|++.++. ..+. ......+++.++.++. + ...+|+.++|.+++. +++|||+++|+
T Consensus 19 l~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~-~--~~~g~~~a~n~g~~~----~~~d~i~~~D~ 91 (229)
T cd04192 19 LSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSR-V--SISGKKNALTTAIKA----AKGDWIVTTDA 91 (229)
T ss_pred HHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccC-c--ccchhHHHHHHHHHH----hcCCEEEEECC
Confidence 35677876 2323444444432 2222 2233457788776653 1 136899999999999 89999999999
Q ss_pred CCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHH----hhhhhHhhhhhcCCc-ccccceeeee
Q 009443 91 DMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRS----GYRLQWPGMDGLKGP-FLTGTGHYIR 165 (534)
Q Consensus 91 D~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~----f~~~~~~g~d~~~~~-~~~Gtg~~~R 165 (534)
|++ +.|++|++++..+.++. .+.|+.++.+... +.+...... +......+...++.+ .++|+++++|
T Consensus 92 D~~-~~~~~l~~l~~~~~~~~----~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r 163 (229)
T cd04192 92 DCV-VPSNWLLTFVAFIQKEQ----IGLVAGPVIYFKG---KSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYR 163 (229)
T ss_pred Ccc-cCHHHHHHHHHHhhcCC----CcEEeeeeeecCC---ccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEE
Confidence 996 56999999999886544 5678887766521 222111111 111222233344444 4579999999
Q ss_pred ccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCC--C
Q 009443 166 RESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSY--Q 242 (534)
Q Consensus 166 R~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~--~ 242 (534)
|+++ +++ ||++ .
T Consensus 164 r~~~-----------------------------------------------------------------~~~ggf~~~~~ 178 (229)
T cd04192 164 KEAF-----------------------------------------------------------------FEVGGFEGNDH 178 (229)
T ss_pred HHHH-----------------------------------------------------------------HHhcCCccccc
Confidence 9999 566 5764 4
Q ss_pred cccchHHHHHHHHhCCC-EEEEeCCCCCceeeccCCCHHHHHHhhhhcccc
Q 009443 243 SVSEDFFTGFILHCKGW-TSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 292 (534)
Q Consensus 243 svtED~~t~~~l~~~Gw-rs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G 292 (534)
..+||.+..+++..+|| ++.|++..........|+++.++++||+||++|
T Consensus 179 ~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 179 IASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred cccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 67899999999999999 998886534677889999999999999999988
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.79 E-value=2.5e-18 Score=167.81 Aligned_cols=202 Identities=18% Similarity=0.114 Sum_probs=134.7
Q ss_pred cceEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHH
Q 009443 22 STIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSAR 101 (534)
Q Consensus 22 ~~~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~ 101 (534)
|-.|-|+.|+++++....-......+.+.++.. + +.+|++|+|.+++. +++|||+++|+|.+ ++|++|+
T Consensus 28 ~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~~-~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~-~~~~~l~ 96 (235)
T cd06434 28 PLEIIVVTDGDDEPYLSILSQTVKYGGIFVITV-P-----HPGKRRALAEGIRH----VTTDIVVLLDSDTV-WPPNALP 96 (235)
T ss_pred CCEEEEEeCCCChHHHHHHHhhccCCcEEEEec-C-----CCChHHHHHHHHHH----hCCCEEEEECCCce-eChhHHH
Confidence 555656666665542111112334566666643 2 35899999999999 89999999999997 6699999
Q ss_pred HHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhh----hHhhhhhcCCc-ccccceeeeeccccCCCcccc
Q 009443 102 QAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL----QWPGMDGLKGP-FLTGTGHYIRRESLYGNFKHK 176 (534)
Q Consensus 102 ~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~ 176 (534)
+++..|.||+ ++.|+..+.+.+.+ ...+......++.. ........++. .+.|..+++||+++....
T Consensus 97 ~l~~~~~~~~----v~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~--- 168 (235)
T cd06434 97 EMLKPFEDPK----VGGVGTNQRILRPR-DSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFL--- 168 (235)
T ss_pred HHHHhccCCC----EeEEcCceEeecCc-ccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhh---
Confidence 9999998765 99999988877642 12332222222221 11222333333 346888899999983100
Q ss_pred CcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcccchHHHHHHHHh
Q 009443 177 GIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHC 256 (534)
Q Consensus 177 ~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~ 256 (534)
-.++|- .+.++.......||.+++.+++.
T Consensus 169 ------------~~~~~~---------------------------------------~~~~~~~~~~~~eD~~l~~~~~~ 197 (235)
T cd06434 169 ------------FLEEFT---------------------------------------NETFMGRRLNAGDDRFLTRYVLS 197 (235)
T ss_pred ------------hHHHhh---------------------------------------hhhhcCCCCCcCchHHHHHHHHH
Confidence 000000 01122222367899999999999
Q ss_pred CCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccch
Q 009443 257 KGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 295 (534)
Q Consensus 257 ~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~q 295 (534)
+||+..|++. +.+...+|.++.++++||+||++|..+
T Consensus 198 ~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 198 HGYKTVYQYT--SEAYTETPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred CCCeEEEecC--CeEEEEcchhHHHHHHHhhhhhhcccC
Confidence 9999999987 566788999999999999999999753
No 32
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.78 E-value=2e-18 Score=165.40 Aligned_cols=164 Identities=17% Similarity=0.223 Sum_probs=125.5
Q ss_pred CcccCcceEEEEE--CCCCChh-hhHHhhhhcCCc--EEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 17 NSRNHSTIIEIIQ--DTSGENE-TIRQADLVEMPL--LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 17 ~~~dh~~~i~vi~--~~~~~~~-~~~~~~~~~~p~--l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
..|+||+ .+|++ |++.|+. ..........|+ +.++..+++.+ ..+|++|+|.+++. ++|||++++|+|
T Consensus 24 ~~q~~~~-~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D 96 (196)
T cd02520 24 FQQDYPK-YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSD 96 (196)
T ss_pred HhccCCC-eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCC
Confidence 4567777 45443 4444332 223344456674 45665544422 34799999999999 899999999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCC
Q 009443 92 MYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG 171 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 171 (534)
.. .+|++|++++..+.+|+ ++.|++. +..|+++++||+++
T Consensus 97 ~~-~~~~~l~~l~~~~~~~~----~~~v~~~---------------------------------~~~g~~~~~r~~~~-- 136 (196)
T cd02520 97 IS-VPPDYLRRMVAPLMDPG----VGLVTCL---------------------------------CAFGKSMALRREVL-- 136 (196)
T ss_pred ce-EChhHHHHHHHHhhCCC----CCeEEee---------------------------------cccCceeeeEHHHH--
Confidence 97 56999999999987765 6777643 56789999999999
Q ss_pred CccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCC--CcccchH
Q 009443 172 NFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSY--QSVSEDF 248 (534)
Q Consensus 172 ~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~--~svtED~ 248 (534)
+++ ||+. ..+.||+
T Consensus 137 ---------------------------------------------------------------~~~ggf~~~~~~~~eD~ 153 (196)
T cd02520 137 ---------------------------------------------------------------DAIGGFEAFADYLAEDY 153 (196)
T ss_pred ---------------------------------------------------------------HhccChHHHhHHHHHHH
Confidence 456 4753 3468999
Q ss_pred HHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccc
Q 009443 249 FTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 292 (534)
Q Consensus 249 ~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G 292 (534)
+.++++..+||++.|+++ +..+...|.++.++++|+.||++.
T Consensus 154 ~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 154 FLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred HHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 999999999999999987 577889999999999999999863
No 33
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.2e-15 Score=161.08 Aligned_cols=214 Identities=17% Similarity=0.190 Sum_probs=161.7
Q ss_pred hcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCc
Q 009443 44 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 123 (534)
Q Consensus 44 ~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq 123 (534)
...-++-|-.|.+| .+-||||+....|.-| +.++|++++|||.+.. +|.+-+++..|. .+++.|.+|+--
T Consensus 209 ~g~~~ifYRrRr~n----~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME---~~P~aGlIQt~P 278 (736)
T COG2943 209 GGEGNIFYRRRRRN----VKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLME---ANPDAGLIQTSP 278 (736)
T ss_pred CCCCceeeehHhhh----hcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHh---hCCCCceeecch
Confidence 34567778777766 5789999999999988 8999999999999865 999999998885 344589999976
Q ss_pred cccCCCccchHHHHHHH---hhh-hhHhhhhhcCCc--ccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhh
Q 009443 124 KFHNFNEHDIYDGSLRS---GYR-LQWPGMDGLKGP--FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSL 197 (534)
Q Consensus 124 ~f~n~~~~d~~~~~~~~---f~~-~~~~g~d~~~~~--~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~ 197 (534)
.-.|. +..|++.++. .|+ +...|...|++. -|-|.|+++|-++...
T Consensus 279 ~~~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~-------------------------- 330 (736)
T COG2943 279 KASGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE-------------------------- 330 (736)
T ss_pred hhcCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH--------------------------
Confidence 65554 3566654432 333 355688888864 6899999999999842
Q ss_pred hhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCC
Q 009443 198 HQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 277 (534)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~ 277 (534)
+|+...-. .+..|....++.|+..+-.|.+.||.+ ..-++..-++.+.|.
T Consensus 331 --------------------------hcgLp~Lp---G~~pFgG~ilSHDfvEAALmRRaGW~v-~ia~dL~GSyEE~Pp 380 (736)
T COG2943 331 --------------------------HCGLPPLP---GRGPFGGHILSHDFVEAALMRRAGWGV-WIAYDLDGSYEELPP 380 (736)
T ss_pred --------------------------hcCCCCCC---CCCCCCccccchHHHHHHHHhhcCceE-EEeccCCCchhhCCc
Confidence 12221100 123377778899999999999999974 444446788999999
Q ss_pred CHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHhhHHhHHH
Q 009443 278 NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLP 332 (534)
Q Consensus 278 ~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~~ 332 (534)
|+.+.++..+||++|++|-+ +++. .++|.+..|+.+....+.+ +++..
T Consensus 381 nLlD~l~RDRRWC~GNLqh~-----rl~~-~~GlHwvsR~h~~tGVmsY-lsaPl 428 (736)
T COG2943 381 NLLDELKRDRRWCHGNLQHF-----RLFL-VKGLHWVSRAHFLTGVMSY-LSAPL 428 (736)
T ss_pred hHHHHHhhhhHhhhcchhhc-----eeec-cCCccHHHHHHHHHHHHHH-HhhHH
Confidence 99999999999999999875 3333 5899999999888766655 54443
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.71 E-value=3.4e-16 Score=154.60 Aligned_cols=192 Identities=15% Similarity=0.113 Sum_probs=131.6
Q ss_pred cccCcc---eEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 009443 18 SRNHST---IIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 93 (534)
Q Consensus 18 ~~dh~~---~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~ 93 (534)
.|++|. .+-|+.|++.|+. .+....... ++.++..+++ .+|++|+|.+++. +++|+|+++|+|.+
T Consensus 53 ~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~-----~g~~~a~n~gi~~----a~~d~i~~lD~D~~ 121 (251)
T cd06439 53 ALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPER-----RGKAAALNRALAL----ATGEIVVFTDANAL 121 (251)
T ss_pred hCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCC-----CChHHHHHHHHHH----cCCCEEEEEccccC
Confidence 456654 3434445555432 122222222 6777766544 5799999999999 88999999999997
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHH-HHHhhhhhHhhhhhcCC-cccccceeeeeccccCC
Q 009443 94 CNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGS-LRSGYRLQWPGMDGLKG-PFLTGTGHYIRRESLYG 171 (534)
Q Consensus 94 ~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~ 171 (534)
+ +|+++++++..+.+++ ++.|++.....+.+. ...... ...+...........+. ....|++.++||+++
T Consensus 122 ~-~~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~-- 193 (251)
T cd06439 122 L-DPDALRLLVRHFADPS----VGAVSGELVIVDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELF-- 193 (251)
T ss_pred c-CHHHHHHHHHHhcCCC----ccEEEeEEEecCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHh--
Confidence 5 5999999999997654 788887666554321 111111 11111211111222222 234555566888887
Q ss_pred CccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCcccchHHHH
Q 009443 172 NFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTG 251 (534)
Q Consensus 172 ~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~ 251 (534)
+ ||......||.+++
T Consensus 194 ---------------------------------------------------------------~--~~~~~~~~eD~~l~ 208 (251)
T cd06439 194 ---------------------------------------------------------------R--PLPADTINDDFVLP 208 (251)
T ss_pred ---------------------------------------------------------------c--CCCcccchhHHHHH
Confidence 2 55556678999999
Q ss_pred HHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccch
Q 009443 252 FILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLID 295 (534)
Q Consensus 252 ~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~q 295 (534)
.++..+||++.|+++ +......|.+..+.++|+.||+.|++|
T Consensus 209 ~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 209 LRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred HHHHHcCCeEEeccc--cEEEEeCcccHHHHHHHHHHHHhcccc
Confidence 999999999999987 678999999999999999999999987
No 35
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.63 E-value=3.2e-15 Score=142.35 Aligned_cols=161 Identities=21% Similarity=0.254 Sum_probs=119.6
Q ss_pred EEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCc
Q 009443 51 YVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNE 130 (534)
Q Consensus 51 Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~ 130 (534)
++.-+...+ .+.|.+||.++++. . .++|+|++.|+|..++ |++|++++..+.||+ ++.|.++..+.+.
T Consensus 6 lvv~~~~~g--~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~-- 73 (175)
T PF13506_consen 6 LVVGGPPRG--CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA-- 73 (175)
T ss_pred EEECCCCCC--CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC--
Confidence 444444433 57999999999996 3 7999999999999865 999999999999887 8999776655443
Q ss_pred cchHHHHHH-HhhhhhHhhhh-hcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCC
Q 009443 131 HDIYDGSLR-SGYRLQWPGMD-GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNG 208 (534)
Q Consensus 131 ~d~~~~~~~-~f~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~ 208 (534)
+ .+..... .++.....-.. ..+.+++.|..+++||++|
T Consensus 74 ~-~~~~~l~~~~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L--------------------------------------- 113 (175)
T PF13506_consen 74 R-GFWSRLEAAFFNFLPGVLQALGGAPFAWGGSMAFRREAL--------------------------------------- 113 (175)
T ss_pred c-CHHHHHHHHHHhHHHHHHHHhcCCCceecceeeeEHHHH---------------------------------------
Confidence 2 3333322 22222111111 2245778999999999999
Q ss_pred ccchhhHHhhhcccccccccccccccccc-ccCC--CcccchHHHHHHHHhCCCEEEEeCCCCCceeeccC----CCHHH
Q 009443 209 ENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST----TNLND 281 (534)
Q Consensus 209 ~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP----~~l~~ 281 (534)
+++ ||.. +.++||+.+|-+++.+|||++..+. +......| .++.+
T Consensus 114 --------------------------~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~ 165 (175)
T PF13506_consen 114 --------------------------EEIGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRD 165 (175)
T ss_pred --------------------------HHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHH
Confidence 345 4544 5799999999999999999999885 45556666 48999
Q ss_pred HHHhhhhccc
Q 009443 282 VLIQGTRWAS 291 (534)
Q Consensus 282 ~l~Qr~RWa~ 291 (534)
+++++.||++
T Consensus 166 ~~~r~~RW~r 175 (175)
T PF13506_consen 166 FFRRQLRWAR 175 (175)
T ss_pred HHHHHHhhcC
Confidence 9999999985
No 36
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.62 E-value=1.2e-14 Score=142.19 Aligned_cols=174 Identities=16% Similarity=0.083 Sum_probs=122.4
Q ss_pred HhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEE
Q 009443 40 QADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 119 (534)
Q Consensus 40 ~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~V 119 (534)
.......|.+.++..+ .+++++|+|.+++. +++|+++++|+|.+ ++|++|.+++..+.+++ ...|
T Consensus 50 ~~~~~~~~~v~~i~~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~-~~~~~l~~~~~~~~~~~----~~~v 114 (249)
T cd02525 50 QEYAAKDPRIRLIDNP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAV-YPKDYILELVEALKRTG----ADNV 114 (249)
T ss_pred HHHHhcCCeEEEEeCC------CCCchHHHHHHHHH----hCCCEEEEECCCcc-CCHHHHHHHHHHHhcCC----CCEE
Confidence 3444557888888643 24689999999999 89999999999996 67999999998887654 4445
Q ss_pred cCCccccCCCccchHHHHHHHh----hhhhHhhhhhcC---CcccccceeeeeccccCCCccccCcchHhhhhhhcCchh
Q 009443 120 QFPQKFHNFNEHDIYDGSLRSG----YRLQWPGMDGLK---GPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNL 192 (534)
Q Consensus 120 Q~pq~f~n~~~~d~~~~~~~~f----~~~~~~g~d~~~---~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~ 192 (534)
+.+....+ .+.+....... +........... .....|.+.++||+++
T Consensus 115 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 168 (249)
T cd02525 115 GGPMETIG---ESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVF----------------------- 168 (249)
T ss_pred ecceecCC---CChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHH-----------------------
Confidence 54433222 12222111111 111111111111 2245788888999988
Q ss_pred HHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccc-cCCC-cccchHHHHHHHHhCCCEEEEeCCCCCc
Q 009443 193 FIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG-FSYQ-SVSEDFFTGFILHCKGWTSTYLDPSRPQ 270 (534)
Q Consensus 193 ~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG-~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~~ 270 (534)
+++| |+.. ...||.+.+++++.+|+++.|++. +.
T Consensus 169 ------------------------------------------~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~ 204 (249)
T cd02525 169 ------------------------------------------EKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IR 204 (249)
T ss_pred ------------------------------------------HHhCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eE
Confidence 3443 5543 347999999999999999999997 46
Q ss_pred eeeccCCCHHHHHHhhhhcccccchhhh
Q 009443 271 FLGTSTTNLNDVLIQGTRWASGLIDVSI 298 (534)
Q Consensus 271 ~~g~aP~~l~~~l~Qr~RWa~G~~qi~~ 298 (534)
..-..|.+++.+.+|+.||+.|..|...
T Consensus 205 ~~~~~~~s~~~~~~~~~r~~~~~~~~~~ 232 (249)
T cd02525 205 VYYYPRSTLKKLARQYFRYGKWRARTLR 232 (249)
T ss_pred EEEcCCCCHHHHHHHHHHHhhhhHHHHH
Confidence 6777899999999999999999999986
No 37
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.60 E-value=2.1e-13 Score=144.89 Aligned_cols=198 Identities=16% Similarity=0.100 Sum_probs=127.4
Q ss_pred CCCcccCcceEE--EEECCCCChh-hhHHhhhhcCC---cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCC-----CC
Q 009443 15 YGNSRNHSTIIE--IIQDTSGENE-TIRQADLVEMP---LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISN-----SP 83 (534)
Q Consensus 15 ~~~~~dh~~~i~--vi~~~~~~~~-~~~~~~~~~~p---~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~-----g~ 83 (534)
+...||+|...+ |+.|+++|+. .+.+....+.| +++++..+.+|.. ..+|+.|+|.+++. +. +|
T Consensus 61 sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g-~~Gk~~A~n~g~~~----A~~~~~~gd 135 (384)
T TIGR03469 61 SLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPG-WSGKLWAVSQGIAA----ARTLAPPAD 135 (384)
T ss_pred HHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCC-CcchHHHHHHHHHH----HhccCCCCC
Confidence 345688885334 4445555542 23343444555 7888875544321 36899999999999 55 99
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHH----HHHhhhhhH---hhhhhc-CCc
Q 009443 84 YILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGS----LRSGYRLQW---PGMDGL-KGP 155 (534)
Q Consensus 84 ~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~----~~~f~~~~~---~g~d~~-~~~ 155 (534)
+++.+|||.. ++|+.+++++..+.+++ +++|..+.++.. .+.+... ...++.... ...+.. ...
T Consensus 136 ~llflDaD~~-~~p~~l~~lv~~~~~~~----~~~vs~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (384)
T TIGR03469 136 YLLLTDADIA-HGPDNLARLVARARAEG----LDLVSLMVRLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTA 207 (384)
T ss_pred EEEEECCCCC-CChhHHHHHHHHHHhCC----CCEEEecccccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccce
Confidence 9999999997 56999999999987654 344543333221 1222211 111111111 111111 122
Q ss_pred ccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccc
Q 009443 156 FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGE 235 (534)
Q Consensus 156 ~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~ 235 (534)
...|.+.++||+++ +
T Consensus 208 ~~~G~~~lirr~~~-----------------------------------------------------------------~ 222 (384)
T TIGR03469 208 AAAGGCILIRREAL-----------------------------------------------------------------E 222 (384)
T ss_pred eecceEEEEEHHHH-----------------------------------------------------------------H
Confidence 35789999999999 4
Q ss_pred cc-ccCC--CcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhccc
Q 009443 236 EV-GFSY--QSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 291 (534)
Q Consensus 236 ~v-G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~ 291 (534)
++ ||+. ..+.||++++.++..+|++..+.... .......-+++.+.++|+.||+.
T Consensus 223 ~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 223 RIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred HcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEecCCHHHHHHHHHHhHH
Confidence 66 4764 46899999999999999999998763 23333445699999999999943
No 38
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.53 E-value=9.4e-14 Score=132.89 Aligned_cols=137 Identities=18% Similarity=0.140 Sum_probs=95.5
Q ss_pred eEEEEECCCCChhhhHHhh-hhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcC-------CCCCCCEEEEeCCCCCCC
Q 009443 24 IIEIIQDTSGENETIRQAD-LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSG-------VISNSPYILGLDCDMYCN 95 (534)
Q Consensus 24 ~i~vi~~~~~~~~~~~~~~-~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~-------~~s~g~~Il~lDaD~~~~ 95 (534)
.|-|+.|++.|+. ..... ....++++++.++... .+.+|++|+|.+++.+. ....+|+|+++|+|.. +
T Consensus 27 eIivvdd~S~D~t-~~~~~~~~~~~~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~-~ 102 (191)
T cd06436 27 LVLVIDDASDDDT-AGIVRLAITDSRVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGR-L 102 (191)
T ss_pred EEEEEECCCCcCH-HHHHhheecCCcEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCC-c
Confidence 4545556666542 22122 3345789998875321 13589999999999842 0113589999999997 5
Q ss_pred chHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHH----HHHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 96 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG----SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 96 ~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
+|++|+++..+|.||+ ++.||.+..+.|.+. ..+.. +...++..++.++...+...++|+|+++||++|
T Consensus 103 ~~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 103 DPNALEAVAPYFSDPR----VAGTQSRVRMYNRHK-NLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred CHhHHHHHHHhhcCCc----eEEEeeeEEEecCCC-CHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 6999999888887776 899999998887542 23222 223344567778877776667999999999999
No 39
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.32 E-value=7.5e-12 Score=118.41 Aligned_cols=101 Identities=21% Similarity=0.105 Sum_probs=70.9
Q ss_pred CCChHHHHHHHHHHcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHH---
Q 009443 62 HHFKGGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGS--- 137 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~-~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~--- 137 (534)
..+|++|+|.+++.+. .-+++|+|+++|||++ ++|+++++++..|.+. ...||+.....+... ..+...
T Consensus 61 ~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~-~~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~~~~~~~ 133 (183)
T cd06438 61 RRGKGYALDFGFRHLLNLADDPDAVVVFDADNL-VDPNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWITRLYAF 133 (183)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC-CChhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHHHHHHHH
Confidence 4689999999998741 1146999999999997 5599999999998642 245777666555322 222222
Q ss_pred -HHHhhhhhHhhhhhcCCc-ccccceeeeecccc
Q 009443 138 -LRSGYRLQWPGMDGLKGP-FLTGTGHYIRRESL 169 (534)
Q Consensus 138 -~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL 169 (534)
...++.....++..+++. .+.|+|+++||++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 134 AFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 222334445567777765 46899999999999
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.31 E-value=2e-11 Score=116.12 Aligned_cols=165 Identities=15% Similarity=0.126 Sum_probs=108.6
Q ss_pred CcccCcc-eEEEEECCCCChhh--hHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 009443 17 NSRNHST-IIEIIQDTSGENET--IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 93 (534)
Q Consensus 17 ~~~dh~~-~i~vi~~~~~~~~~--~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~ 93 (534)
..|+++. .+-|+.|++.++++ +.+......| +.++.++++ .++++|+|.|++. ++||||+++|+|.+
T Consensus 23 ~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~ 92 (201)
T cd04195 23 LKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKN-----RGLGKALNEGLKH----CTYDWVARMDTDDI 92 (201)
T ss_pred HhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCcc-----ccHHHHHHHHHHh----cCCCEEEEeCCccc
Confidence 4455553 33334455434322 2233344556 888887665 5899999999999 89999999999997
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHH----HHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 94 CNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGS----LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 94 ~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
..|+++++++..|.+ .+++++|.+.....+.+........ ....... ......++|.++++||+++
T Consensus 93 -~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~rr~~~ 162 (201)
T cd04195 93 -SLPDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKF------ARRRSPFNHPTVMFRKSKV 162 (201)
T ss_pred -cCcHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCeeccccCCCCHHHHHHH------hccCCCCCChHHhhhHHHH
Confidence 559999999999852 2337788776655433221111000 0001111 0112234566778999988
Q ss_pred CCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccchH
Q 009443 170 YGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDF 248 (534)
Q Consensus 170 ~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED~ 248 (534)
+++ ||......||.
T Consensus 163 -----------------------------------------------------------------~~~g~~~~~~~~eD~ 177 (201)
T cd04195 163 -----------------------------------------------------------------LAVGGYQDLPLVEDY 177 (201)
T ss_pred -----------------------------------------------------------------HHcCCcCCCCCchHH
Confidence 455 58777889999
Q ss_pred HHHHHHHhCCCEEEEeCC
Q 009443 249 FTGFILHCKGWTSTYLDP 266 (534)
Q Consensus 249 ~t~~~l~~~Gwrs~y~~~ 266 (534)
++..++..+|++..|+++
T Consensus 178 ~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 178 ALWARMLANGARFANLPE 195 (201)
T ss_pred HHHHHHHHcCCceecccH
Confidence 999999999999999986
No 41
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.25 E-value=8e-11 Score=111.97 Aligned_cols=165 Identities=16% Similarity=0.126 Sum_probs=106.3
Q ss_pred CcccCcc-eEEEEECCCCChh--hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 009443 17 NSRNHST-IIEIIQDTSGENE--TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 93 (534)
Q Consensus 17 ~~~dh~~-~i~vi~~~~~~~~--~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~ 93 (534)
..|+++. .|-|+.+++.++. .+........+.+.++..+.+ .+++.|+|.+++. +++||++++|+|.+
T Consensus 25 ~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~g~~~----a~~d~i~~ld~D~~ 95 (202)
T cd04184 25 RAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN-----GGISAATNSALEL----ATGEFVALLDHDDE 95 (202)
T ss_pred HhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC-----CCHHHHHHHHHHh----hcCCEEEEECCCCc
Confidence 3456665 3434445554432 122223445678888766544 6899999999999 89999999999996
Q ss_pred CCchHHHHHHHHHh-cCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCC
Q 009443 94 CNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGN 172 (534)
Q Consensus 94 ~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 172 (534)
++|+++.+++..+ .+|+ +++|.++......+. .... ..+..... .+......+.|.++++||+++
T Consensus 96 -~~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~--- 161 (202)
T cd04184 96 -LAPHALYEVVKALNEHPD----ADLIYSDEDKIDEGG-KRSE----PFFKPDWS-PDLLLSQNYIGHLLVYRRSLV--- 161 (202)
T ss_pred -CChHHHHHHHHHHHhCCC----CCEEEccHHhccCCC-CEec----cccCCCCC-HHHhhhcCCccceEeEEHHHH---
Confidence 6699999999988 5555 666765544332110 0000 00000000 011112235677788999998
Q ss_pred ccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCC-cccchHHH
Q 009443 173 FKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQ-SVSEDFFT 250 (534)
Q Consensus 173 ~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~-svtED~~t 250 (534)
+++ ||+.+ ...||.+.
T Consensus 162 --------------------------------------------------------------~~iggf~~~~~~~eD~~l 179 (202)
T cd04184 162 --------------------------------------------------------------RQVGGFREGFEGAQDYDL 179 (202)
T ss_pred --------------------------------------------------------------HHhCCCCcCcccchhHHH
Confidence 456 47654 35799999
Q ss_pred HHHHHhCCCEEEEeCC
Q 009443 251 GFILHCKGWTSTYLDP 266 (534)
Q Consensus 251 ~~~l~~~Gwrs~y~~~ 266 (534)
++|++.+||+..|+++
T Consensus 180 ~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 180 VLRVSEHTDRIAHIPR 195 (202)
T ss_pred HHHHHhccceEEEccH
Confidence 9999999999999987
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.11 E-value=1e-09 Score=112.31 Aligned_cols=57 Identities=11% Similarity=-0.073 Sum_probs=49.4
Q ss_pred hhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 43 LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 43 ~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
....|+++++..+++ .+++.|.|.|++. +.||||+.+|+|+.+ +|++|.+++..+..
T Consensus 54 ~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~ 110 (299)
T cd02510 54 KKYLPKVKVLRLKKR-----EGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGWLEPLLARIAE 110 (299)
T ss_pred hhcCCcEEEEEcCCC-----CCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccHHHHHHHHHHh
Confidence 456789999987655 6899999999999 899999999999975 69999999998863
No 43
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.11 E-value=2.9e-10 Score=111.04 Aligned_cols=146 Identities=17% Similarity=0.124 Sum_probs=91.1
Q ss_pred cCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHH---HHhcCCCCCCceEEEcC
Q 009443 45 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM---CFHLDPKTSSSLAFVQF 121 (534)
Q Consensus 45 ~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~---~~f~dp~~~~~v~~VQ~ 121 (534)
..+.+.++..+++ .++++|+|.+++.+.- .++|||+.+|+|.+ ++|++|.+++ ..+. .+++++.+ .
T Consensus 45 ~~~~i~~i~~~~n-----~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~---~~~~~~~~-~ 113 (237)
T cd02526 45 NSEKIELIHLGEN-----LGIAKALNIGIKAALE-NGADYVLLFDQDSV-PPPDMVEKLLAYKILSD---KNSNIGAV-G 113 (237)
T ss_pred cCCcEEEEECCCc-----eehHHhhhHHHHHHHh-CCCCEEEEECCCCC-cCHhHHHHHHHHHHhhc---cCCCeEEE-e
Confidence 4578888887665 4699999999998210 14599999999997 5699999985 2222 22335544 4
Q ss_pred CccccCCCccchHHHHHHH-hhh-hhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhh
Q 009443 122 PQKFHNFNEHDIYDGSLRS-GYR-LQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 199 (534)
Q Consensus 122 pq~f~n~~~~d~~~~~~~~-f~~-~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~ 199 (534)
|+................. ... ...............|+|+++||+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~------------------------------ 163 (237)
T cd02526 114 PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEAL------------------------------ 163 (237)
T ss_pred eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHH------------------------------
Confidence 5544322111100000000 000 00011111123445788999999998
Q ss_pred hccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcc--cchHHHHHHHHhCCCEEEEeCC
Q 009443 200 SYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSV--SEDFFTGFILHCKGWTSTYLDP 266 (534)
Q Consensus 200 ~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~sv--tED~~t~~~l~~~Gwrs~y~~~ 266 (534)
+++ ||+.... .||++.++|+..+||+..|++.
T Consensus 164 -----------------------------------~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 164 -----------------------------------EKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred -----------------------------------HHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 455 4765443 5899999999999999999987
No 44
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.11 E-value=5e-10 Score=105.26 Aligned_cols=134 Identities=18% Similarity=0.098 Sum_probs=90.0
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCCceEEEcCCccccC
Q 009443 49 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHN 127 (534)
Q Consensus 49 l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq~f~n 127 (534)
+.++..+++ .++++|+|.|++. +++|||+++|+|..+ .|+.+.+.+..+ .+++ ..+|.....+.+
T Consensus 52 ~~~~~~~~~-----~g~~~a~n~~~~~----a~~~~v~~ld~D~~~-~~~~~~~~~~~~~~~~~----~~~v~g~~~~~~ 117 (202)
T cd06433 52 ITYWISEPD-----KGIYDAMNKGIAL----ATGDIIGFLNSDDTL-LPGALLAVVAAFAEHPE----VDVVYGDVLLVD 117 (202)
T ss_pred cEEEEecCC-----cCHHHHHHHHHHH----cCCCEEEEeCCCccc-CchHHHHHHHHHHhCCC----ccEEEeeeEEEc
Confidence 344444443 5899999999999 899999999999974 589999988544 4444 566665554433
Q ss_pred CCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccC
Q 009443 128 FNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN 207 (534)
Q Consensus 128 ~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~ 207 (534)
.+........ ...............+|+++++||+++
T Consensus 118 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 154 (202)
T cd06433 118 ENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLF-------------------------------------- 154 (202)
T ss_pred CCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHH--------------------------------------
Confidence 2211110000 011111222334456788899999998
Q ss_pred CccchhhHHhhhccccccccccccccccccc-cCCC-cccchHHHHHHHHhCCCEEEEeCC
Q 009443 208 GENLSNVLQQETEVLASCSYEHQTKWGEEVG-FSYQ-SVSEDFFTGFILHCKGWTSTYLDP 266 (534)
Q Consensus 208 ~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG-~~~~-svtED~~t~~~l~~~Gwrs~y~~~ 266 (534)
+++| |+.+ ..+||.+..+++..+|++..++++
T Consensus 155 ---------------------------~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 155 ---------------------------EKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred ---------------------------HHhCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 4554 6543 468999999999999999998886
No 45
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.06 E-value=1.2e-09 Score=99.67 Aligned_cols=129 Identities=19% Similarity=0.206 Sum_probs=94.3
Q ss_pred eEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 009443 24 IIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (534)
Q Consensus 24 ~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~ 103 (534)
.+-|+.|++.++ ..+......+++.++..+++ .++++|+|.+++. +++++++++|+|.+ +.|+++.++
T Consensus 28 ~iiivdd~s~~~--~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~~~~~----~~~~~i~~~D~D~~-~~~~~l~~~ 95 (166)
T cd04186 28 EVIVVDNASTDG--SVELLRELFPEVRLIRNGEN-----LGFGAGNNQGIRE----AKGDYVLLLNPDTV-VEPGALLEL 95 (166)
T ss_pred EEEEEECCCCch--HHHHHHHhCCCeEEEecCCC-----cChHHHhhHHHhh----CCCCEEEEECCCcE-ECccHHHHH
Confidence 343444555443 22222233446777776544 5899999999999 79999999999997 569999999
Q ss_pred HHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhh
Q 009443 104 MCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAEL 183 (534)
Q Consensus 104 ~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~ 183 (534)
+..+.+ .++++++... ++|++.++||+++
T Consensus 96 ~~~~~~---~~~~~~~~~~----------------------------------~~~~~~~~~~~~~-------------- 124 (166)
T cd04186 96 LDAAEQ---DPDVGIVGPK----------------------------------VSGAFLLVRREVF-------------- 124 (166)
T ss_pred HHHHHh---CCCceEEEcc----------------------------------CceeeEeeeHHHH--------------
Confidence 886652 2336666433 7889999999988
Q ss_pred hhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCc--ccchHHHHHHHHhCCCE
Q 009443 184 KDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQS--VSEDFFTGFILHCKGWT 260 (534)
Q Consensus 184 ~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~s--vtED~~t~~~l~~~Gwr 260 (534)
+++ ||+... ..||.+.++++..+||+
T Consensus 125 ---------------------------------------------------~~~~~~~~~~~~~~eD~~~~~~~~~~g~~ 153 (166)
T cd04186 125 ---------------------------------------------------EEVGGFDEDFFLYYEDVDLCLRARLAGYR 153 (166)
T ss_pred ---------------------------------------------------HHcCCCChhhhccccHHHHHHHHHHcCCe
Confidence 345 365543 46999999999999999
Q ss_pred EEEeCC
Q 009443 261 STYLDP 266 (534)
Q Consensus 261 s~y~~~ 266 (534)
..++++
T Consensus 154 i~~~~~ 159 (166)
T cd04186 154 VLYVPQ 159 (166)
T ss_pred EEEccc
Confidence 999887
No 46
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.06 E-value=5.1e-09 Score=101.19 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=59.2
Q ss_pred CcceEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHH
Q 009443 21 HSTIIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTS 99 (534)
Q Consensus 21 h~~~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~ 99 (534)
++-.|-|+.|++.|+. .+........|.+.++..+++ .+|++|+|.+++. +.||+|+++|+|.. ++|+.
T Consensus 26 ~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~-~~~~~ 95 (224)
T cd06442 26 IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGK-----RGLGSAYIEGFKA----ARGDVIVVMDADLS-HPPEY 95 (224)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCC-----CChHHHHHHHHHH----cCCCEEEEEECCCC-CCHHH
Confidence 3433434445554432 233344556788888877665 6899999999999 89999999999996 56999
Q ss_pred HHHHHHHhcCCC
Q 009443 100 ARQAMCFHLDPK 111 (534)
Q Consensus 100 l~~~~~~f~dp~ 111 (534)
+..++..+.+++
T Consensus 96 l~~l~~~~~~~~ 107 (224)
T cd06442 96 IPELLEAQLEGG 107 (224)
T ss_pred HHHHHHHHhcCC
Confidence 999999876554
No 47
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.01 E-value=8.6e-09 Score=102.21 Aligned_cols=131 Identities=13% Similarity=0.038 Sum_probs=75.9
Q ss_pred EEEEECCCCChh-hhHHhhhhcC--CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHH
Q 009443 25 IEIIQDTSGENE-TIRQADLVEM--PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSAR 101 (534)
Q Consensus 25 i~vi~~~~~~~~-~~~~~~~~~~--p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~ 101 (534)
|-|+.|++.|+. .+......+. +.+.++.++++ .+|++|+|.+++. ++||||+++|+|.. .+|+.+.
T Consensus 43 iivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-----~G~~~a~n~g~~~----a~g~~i~~lD~D~~-~~~~~l~ 112 (243)
T PLN02726 43 IIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-----LGLGTAYIHGLKH----ASGDFVVIMDADLS-HHPKYLP 112 (243)
T ss_pred EEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-----CCHHHHHHHHHHH----cCCCEEEEEcCCCC-CCHHHHH
Confidence 434556665542 2223333333 46777766544 5799999999998 89999999999996 6799999
Q ss_pred HHHHHhcCCCCCCceEEEcCCccccCCC-ccchHHHH-HHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 102 QAMCFHLDPKTSSSLAFVQFPQKFHNFN-EHDIYDGS-LRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 102 ~~~~~f~dp~~~~~v~~VQ~pq~f~n~~-~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
+++..+.+++ ..+|..+....+.. ..-.+... ...++.....-..+.+..-.+|...++||+++
T Consensus 113 ~l~~~~~~~~----~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~ 178 (243)
T PLN02726 113 SFIKKQRETG----ADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSAL 178 (243)
T ss_pred HHHHHHHhcC----CcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHH
Confidence 9998886543 44454432221110 00011111 11122222221222233445666778999998
No 48
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.00 E-value=1.9e-09 Score=109.04 Aligned_cols=148 Identities=16% Similarity=0.022 Sum_probs=95.6
Q ss_pred hcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCc
Q 009443 44 VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQ 123 (534)
Q Consensus 44 ~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq 123 (534)
...|++.|+..++| .+.|+|+|.+++.+- -.++|||+.+|.|.+ ++|+.+.+++..+..+ +.+++.|. |.
T Consensus 42 ~~~~~i~~i~~~~N-----~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~--~~~~~~~~-~~ 111 (281)
T TIGR01556 42 LRGQKIALIHLGDN-----QGIAGAQNQGLDASF-RRGVQGVLLLDQDSR-PGNAFLAAQWKLLSAE--NGQACALG-PR 111 (281)
T ss_pred ccCCCeEEEECCCC-----cchHHHHHHHHHHHH-HCCCCEEEEECCCCC-CCHHHHHHHHHHHHhc--CCceEEEC-Ce
Confidence 35689999987665 589999999999831 027899999999997 5699999999888532 12477775 44
Q ss_pred cccCCCccchHHH--HHHHhhhhh-Hhhhhh-cCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhh
Q 009443 124 KFHNFNEHDIYDG--SLRSGYRLQ-WPGMDG-LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 199 (534)
Q Consensus 124 ~f~n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~ 199 (534)
.+... ....+.. ......... ...... ....+..++|+++||+++
T Consensus 112 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~------------------------------ 160 (281)
T TIGR01556 112 FFDRG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVY------------------------------ 160 (281)
T ss_pred EEcCC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHH------------------------------
Confidence 33321 1111110 000000000 000011 122345788899999999
Q ss_pred hccccccCCccchhhHHhhhccccccccccccccccccc-cCCCc--ccchHHHHHHHHhCCCEEEEeCCC
Q 009443 200 SYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG-FSYQS--VSEDFFTGFILHCKGWTSTYLDPS 267 (534)
Q Consensus 200 ~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG-~~~~s--vtED~~t~~~l~~~Gwrs~y~~~~ 267 (534)
+++| |+++- =.||.+.++|+..+||++.++++.
T Consensus 161 -----------------------------------~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~ 196 (281)
T TIGR01556 161 -----------------------------------QRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDI 196 (281)
T ss_pred -----------------------------------HHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCE
Confidence 4565 54431 258999999999999999999973
No 49
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.99 E-value=1.5e-08 Score=94.75 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=67.9
Q ss_pred eEEEEECCCCChh-hhHHhhhhcCC-cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHH
Q 009443 24 IIEIIQDTSGENE-TIRQADLVEMP-LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSAR 101 (534)
Q Consensus 24 ~i~vi~~~~~~~~-~~~~~~~~~~p-~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~ 101 (534)
.|-|+.|++.+.. .+........| .+.++.+++. ..+|++++|.+++. ++||||+++|+|.+ ++|++++
T Consensus 28 eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~n~g~~~----a~g~~i~~lD~D~~-~~~~~l~ 98 (182)
T cd06420 28 EVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDE----GFRKAKIRNKAIAA----AKGDYLIFIDGDCI-PHPDFIA 98 (182)
T ss_pred EEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCc----chhHHHHHHHHHHH----hcCCEEEEEcCCcc-cCHHHHH
Confidence 4445555555432 22222222222 3455554322 24799999999999 89999999999996 5699999
Q ss_pred HHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 102 QAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 102 ~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
+++..+ ++. ++ |..++...+.+... ..+.|+++.++|+.+
T Consensus 99 ~~~~~~-~~~----~~-v~g~~~~~~~~~~~----------------------~~~~~~~~~~~r~~~ 138 (182)
T cd06420 99 DHIELA-EPG----VF-LSGSRVLLNEKLTE----------------------RGIRGCNMSFWKKDL 138 (182)
T ss_pred HHHHHh-CCC----cE-Eecceeecccccce----------------------eEeccceEEEEHHHH
Confidence 999887 443 33 44444433221110 345677888888887
No 50
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.94 E-value=1.5e-08 Score=97.65 Aligned_cols=129 Identities=19% Similarity=0.118 Sum_probs=84.1
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCcccc
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFH 126 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~ 126 (534)
+++.++.. + .+|++|+|.+++. +++|+|+++|+|.+ ++|+++++++..+.++. ...+.....+.
T Consensus 49 ~~~~~~~~--~-----~g~~~a~n~g~~~----a~~~~i~~~D~D~~-~~~~~l~~l~~~~~~~~----~~~~~~~~~~~ 112 (221)
T cd02522 49 AGVVVISS--P-----KGRARQMNAGAAA----ARGDWLLFLHADTR-LPPDWDAAIIETLRADG----AVAGAFRLRFD 112 (221)
T ss_pred CCeEEEeC--C-----cCHHHHHHHHHHh----ccCCEEEEEcCCCC-CChhHHHHHHHHhhcCC----cEEEEEEeeec
Confidence 66666643 2 3689999999998 88999999999997 56999999876665432 22222222222
Q ss_pred CCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhcccccc
Q 009443 127 NFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV 206 (534)
Q Consensus 127 n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~ 206 (534)
+. +..... .......+.......+.+.|.++||+++
T Consensus 113 ~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~------------------------------------- 148 (221)
T cd02522 113 DP---GPRLRL----LELGANLRSRLFGLPYGDQGLFIRRELF------------------------------------- 148 (221)
T ss_pred CC---ccchhh----hhhcccceecccCCCcCCceEEEEHHHH-------------------------------------
Confidence 21 111110 1111111111222334566788888887
Q ss_pred CCccchhhHHhhhcccccccccccccccccc-ccCCCcccchHHHHHHHHhCCCEEEE
Q 009443 207 NGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTY 263 (534)
Q Consensus 207 ~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED~~t~~~l~~~Gwrs~y 263 (534)
+++ ||++....||++.++|+...|++..+
T Consensus 149 ----------------------------~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 149 ----------------------------EELGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ----------------------------HHhCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 456 58888899999999999999999866
No 51
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.88 E-value=2.4e-08 Score=95.28 Aligned_cols=168 Identities=17% Similarity=0.141 Sum_probs=103.3
Q ss_pred cccCcc-eEEEEECCCCChh-hhHHhhhhcCC-cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCC
Q 009443 18 SRNHST-IIEIIQDTSGENE-TIRQADLVEMP-LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 94 (534)
Q Consensus 18 ~~dh~~-~i~vi~~~~~~~~-~~~~~~~~~~p-~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~ 94 (534)
.|+++. .|-|+.|++.|+. .+......+.| .+.++..+++ +++++|+|.+++. ++||||+++|+|.+
T Consensus 22 ~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~G~~~~~n~g~~~----~~g~~v~~ld~Dd~- 91 (214)
T cd04196 22 AQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKN-----LGVARNFESLLQA----ADGDYVFFCDQDDI- 91 (214)
T ss_pred hCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCC-----ccHHHHHHHHHHh----CCCCEEEEECCCcc-
Confidence 344443 2334445554432 23344455555 4555555444 6899999999998 89999999999997
Q ss_pred CchHHHHHHHHHh-cCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhh--hHhhhhhcCCcccccceeeeeccccCC
Q 009443 95 NDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRL--QWPGMDGLKGPFLTGTGHYIRRESLYG 171 (534)
Q Consensus 95 ~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 171 (534)
..|+.|.+++..+ .+|. .+++.+.....+.+. ............. ............+.|+++++||+++
T Consensus 92 ~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-- 164 (214)
T cd04196 92 WLPDKLERLLKAFLKDDK----PLLVYSDLELVDENG-NPIGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELL-- 164 (214)
T ss_pred cChhHHHHHHHHHhcCCC----ceEEecCcEEECCCC-CCcccccccccccCCccCHHHHHHhCccCCceeeEEHHHH--
Confidence 5699999999884 4443 566776655433221 1111100000000 0111122223456899999999998
Q ss_pred CccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCC-cccchHH
Q 009443 172 NFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQ-SVSEDFF 249 (534)
Q Consensus 172 ~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~-svtED~~ 249 (534)
+++ ++... ...||..
T Consensus 165 ---------------------------------------------------------------~~~~~~~~~~~~~~D~~ 181 (214)
T cd04196 165 ---------------------------------------------------------------ELALPFPDADVIMHDWW 181 (214)
T ss_pred ---------------------------------------------------------------HhhccccccccccchHH
Confidence 345 36555 6789999
Q ss_pred HHHHHHhCCCEEEEeCC
Q 009443 250 TGFILHCKGWTSTYLDP 266 (534)
Q Consensus 250 t~~~l~~~Gwrs~y~~~ 266 (534)
...++.. |++..|+++
T Consensus 182 ~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 182 LALLASA-FGKVVFLDE 197 (214)
T ss_pred HHHHHHH-cCceEEcch
Confidence 9988877 778888886
No 52
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.87 E-value=8e-08 Score=105.36 Aligned_cols=167 Identities=17% Similarity=0.203 Sum_probs=101.8
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCccccCCCccchHHHH--HHHhh-hhhHhhhhh-cCC
Q 009443 80 SNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYDGS--LRSGY-RLQWPGMDG-LKG 154 (534)
Q Consensus 80 s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~--~~~f~-~~~~~g~d~-~~~ 154 (534)
...|||+.+|||+. .+|+.+.+++.-+. ||+ ++-|..--+..|.. ..+..-- .+.+. +..+++... +|.
T Consensus 200 ~~~~~il~~DaDt~-~~p~~~~~lv~~m~~d~~----i~gvCG~t~i~n~~-~s~~t~~Q~fEY~ish~l~Ka~Es~fG~ 273 (527)
T PF03142_consen 200 DFYEYILMVDADTK-FDPDSVNRLVDAMERDPK----IGGVCGETRIDNKG-QSWWTMYQVFEYAISHHLQKAFESVFGS 273 (527)
T ss_pred cceEEEEEecCCce-EcHHHHHHHHHHHcCCCC----eEEEeceeEEcCCC-CCHhhheeccchhHHHHHHHHHHHHhCc
Confidence 34699999999996 67999999998875 665 55555433333432 1222211 11111 234444444 343
Q ss_pred c-ccccceeeeeccccCCCcc-ccC--cchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccc
Q 009443 155 P-FLTGTGHYIRRESLYGNFK-HKG--IDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQ 230 (534)
Q Consensus 155 ~-~~~Gtg~~~RR~aL~~~~~-~~~--~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~ 230 (534)
. ++.|.-+++|-+|+..... ... .+ .++.++|.... .
T Consensus 274 VtCLPGcfsmyR~~a~~~~~~~~~p~l~~-~~i~~~Y~~~~---------------------~----------------- 314 (527)
T PF03142_consen 274 VTCLPGCFSMYRISALMDGDGYWVPLLIS-PDIIEKYSENP---------------------V----------------- 314 (527)
T ss_pred eeecCCcceeeeeehhccccccccccccc-hHHHHHHhhcc---------------------c-----------------
Confidence 3 3468888999999954100 000 00 01111221100 0
Q ss_pred cccccccc-cCCCcccchHHHHHHHHhC--CCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccccchhh
Q 009443 231 TKWGEEVG-FSYQSVSEDFFTGFILHCK--GWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVS 297 (534)
Q Consensus 231 t~wg~~vG-~~~~svtED~~t~~~l~~~--Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G~~qi~ 297 (534)
+..- ..-..+.||-.++-.|..+ |||..|++. +.+...+|+++..++.||+||..|++--+
T Consensus 315 ----dtlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl 378 (527)
T PF03142_consen 315 ----DTLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNL 378 (527)
T ss_pred ----hHHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhH
Confidence 0000 1112579999988777776 899999998 67899999999999999999999998443
No 53
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.84 E-value=7.6e-08 Score=93.41 Aligned_cols=87 Identities=18% Similarity=0.117 Sum_probs=57.1
Q ss_pred CcccCcceEE--EEECCCCChh-hhHHhhhh--cCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 17 NSRNHSTIIE--IIQDTSGENE-TIRQADLV--EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 17 ~~~dh~~~i~--vi~~~~~~~~-~~~~~~~~--~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
..|+++.-++ |+.|++.|+. .+...... ..+++.++..+.+.+ ...+.+.|.|.+++. ++||||+.+|+|
T Consensus 20 ~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D 94 (219)
T cd06913 20 LQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSD 94 (219)
T ss_pred HhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCC-CCccHHHHHHHHHHh----cCCCEEEEECCC
Confidence 3466653344 4445554432 23333222 345677776654321 135899999999999 899999999999
Q ss_pred CCCCchHHHHHHHHHhcC
Q 009443 92 MYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~d 109 (534)
.. .+|+.+.+.+..+.+
T Consensus 95 ~~-~~~~~l~~~~~~~~~ 111 (219)
T cd06913 95 DV-MMPQRIRLQYEAALQ 111 (219)
T ss_pred cc-CChhHHHHHHHHHHh
Confidence 96 559999888776653
No 54
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.84 E-value=6.7e-08 Score=92.23 Aligned_cols=143 Identities=16% Similarity=0.127 Sum_probs=95.5
Q ss_pred cccCc-ceEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 009443 18 SRNHS-TIIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 95 (534)
Q Consensus 18 ~~dh~-~~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~ 95 (534)
.|.+| ..|-|+.+++.|+. ..+.......| +.++..+++ .+++.++|.+++.+- ..++|+++++|+|.+ +
T Consensus 21 ~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n-----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~-~ 92 (202)
T cd04185 21 AQTRPPDHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPEN-----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAI-P 92 (202)
T ss_pred hccCCCceEEEEECCCCcchHHHHHHhcCCCc-eEEEECccc-----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCC-c
Confidence 34443 33434545555432 23333343444 777776655 468888998888642 257999999999997 5
Q ss_pred chHHHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccc
Q 009443 96 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKH 175 (534)
Q Consensus 96 ~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~ 175 (534)
+|+++++++..+.+|+ ++.+. |..+.. +. +++|.++||+++
T Consensus 93 ~~~~l~~l~~~~~~~~----~~~~~-~~~~~~----~~------------------------~~~~~~~~~~~~------ 133 (202)
T cd04185 93 DPDALEKLLAYADKDN----PQFLA-PLVLDP----DG------------------------SFVGVLISRRVV------ 133 (202)
T ss_pred ChHHHHHHHHHHhcCC----ceEec-ceeEcC----CC------------------------ceEEEEEeHHHH------
Confidence 6999999999887555 56553 333321 10 456789999998
Q ss_pred cCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccc-cCC--CcccchHHHHH
Q 009443 176 KGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG-FSY--QSVSEDFFTGF 252 (534)
Q Consensus 176 ~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG-~~~--~svtED~~t~~ 252 (534)
+++| +.. ....||.+.+.
T Consensus 134 -----------------------------------------------------------~~~g~~~~~~~~~~eD~~~~~ 154 (202)
T cd04185 134 -----------------------------------------------------------EKIGLPDKEFFIWGDDTEYTL 154 (202)
T ss_pred -----------------------------------------------------------HHhCCCChhhhccchHHHHHH
Confidence 3444 322 13469999999
Q ss_pred HHHhCCCEEEEeCCC
Q 009443 253 ILHCKGWTSTYLDPS 267 (534)
Q Consensus 253 ~l~~~Gwrs~y~~~~ 267 (534)
++..+|++. |+++.
T Consensus 155 r~~~~G~~i-~~~~~ 168 (202)
T cd04185 155 RASKAGPGI-YVPDA 168 (202)
T ss_pred HHHHcCCcE-Eecce
Confidence 999999999 99874
No 55
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.82 E-value=1.1e-08 Score=92.59 Aligned_cols=108 Identities=27% Similarity=0.312 Sum_probs=67.1
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCCceEEEcCCccc
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKF 125 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq~f 125 (534)
+.+.++..+++ .+|+.|+|.+++. +++|+|+++|+|..+ .|+++++++..+ .+++ ++.|......
T Consensus 53 ~~~~~~~~~~~-----~g~~~~~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~~~~----~~~v~~~~~~ 118 (180)
T cd06423 53 RRVLVVRDKEN-----GGKAGALNAGLRH----AKGDIVVVLDADTIL-EPDALKRLVVPFFADPK----VGAVQGRVRV 118 (180)
T ss_pred ceEEEEEeccc-----CCchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHhccCCC----eeeEeeeEEE
Confidence 45666666544 6899999999999 899999999999975 599999985554 4443 6666555444
Q ss_pred cCCCccchHHHHHHH-h---hhhhHhhhhhcCC-cccccceeeeecccc
Q 009443 126 HNFNEHDIYDGSLRS-G---YRLQWPGMDGLKG-PFLTGTGHYIRRESL 169 (534)
Q Consensus 126 ~n~~~~d~~~~~~~~-f---~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL 169 (534)
.+... ..+...... + ......+....+. ..+.|+++++||+++
T Consensus 119 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 119 RNGSE-NLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred ecCcC-cceeccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 33210 111111111 1 1111112112222 456899999999999
No 56
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.81 E-value=1.2e-07 Score=91.54 Aligned_cols=77 Identities=19% Similarity=0.171 Sum_probs=56.0
Q ss_pred eEEEEECCCCChh-hhHHhhhhcCCcE-EEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHH
Q 009443 24 IIEIIQDTSGENE-TIRQADLVEMPLL-VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSAR 101 (534)
Q Consensus 24 ~i~vi~~~~~~~~-~~~~~~~~~~p~l-~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~ 101 (534)
.|-|+.|++.|+. .+........|.. +++..+++ .+|++|+|.+++. ++||+|+.+|+|.. .+|+.+.
T Consensus 32 eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~~~g~~~----a~gd~i~~ld~D~~-~~~~~l~ 101 (211)
T cd04188 32 EIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKN-----RGKGGAVRAGMLA----ARGDYILFADADLA-TPFEELE 101 (211)
T ss_pred EEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccC-----CCcHHHHHHHHHH----hcCCEEEEEeCCCC-CCHHHHH
Confidence 3445556665543 2334444556654 77766554 4799999999999 89999999999996 5699999
Q ss_pred HHHHHhcCC
Q 009443 102 QAMCFHLDP 110 (534)
Q Consensus 102 ~~~~~f~dp 110 (534)
+++..+.++
T Consensus 102 ~l~~~~~~~ 110 (211)
T cd04188 102 KLEEALKTS 110 (211)
T ss_pred HHHHHHhcc
Confidence 999886543
No 57
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.67 E-value=3.5e-07 Score=93.29 Aligned_cols=149 Identities=15% Similarity=0.168 Sum_probs=91.8
Q ss_pred cCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCCcc
Q 009443 45 EMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQK 124 (534)
Q Consensus 45 ~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~ 124 (534)
......|+.-+... ..=.+|.|.|.|++. +++|+|+++|+|++ +.|+++.+++.+..+-..+ ..+++-.|..
T Consensus 58 ~~~~~~~i~~~~~~--~~f~~a~arN~g~~~----A~~d~l~flD~D~i-~~~~~i~~~~~~~~~l~~~-~~~~~~~p~~ 129 (281)
T PF10111_consen 58 KNGFIRYIRHEDNG--EPFSRAKARNIGAKY----ARGDYLIFLDADCI-PSPDFIEKLLNHVKKLDKN-PNAFLVYPCL 129 (281)
T ss_pred ccCceEEEEcCCCC--CCcCHHHHHHHHHHH----cCCCEEEEEcCCee-eCHHHHHHHHHHHHHHhcC-CCceEEEeee
Confidence 34444577654321 123899999999999 89999999999997 5699999999831110011 1245556666
Q ss_pred ccCCCccchHHHHHH-----HhhhhhHh-hhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhh
Q 009443 125 FHNFNEHDIYDGSLR-----SGYRLQWP-GMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 198 (534)
Q Consensus 125 f~n~~~~d~~~~~~~-----~f~~~~~~-g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~ 198 (534)
+.+.+....+..... .+.+.... ..+.++....+|++.+++|+.+
T Consensus 130 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f----------------------------- 180 (281)
T PF10111_consen 130 YLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDF----------------------------- 180 (281)
T ss_pred eccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHH-----------------------------
Confidence 654432222222110 11111111 1223333345678888999987
Q ss_pred hhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCc---ccchHHHHHHHHhCCCEEEEeCC
Q 009443 199 QSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQS---VSEDFFTGFILHCKGWTSTYLDP 266 (534)
Q Consensus 199 ~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~s---vtED~~t~~~l~~~Gwrs~y~~~ 266 (534)
.++ ||++.= --||.+.+.||...|.+..++++
T Consensus 181 ------------------------------------~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 181 ------------------------------------LEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------------------------------------HHhCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 344 465532 37999999999999999887775
No 58
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.67 E-value=2.1e-07 Score=105.81 Aligned_cols=166 Identities=19% Similarity=0.254 Sum_probs=106.6
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCccccCCCccchH---HHHH
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIY---DGSL 138 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~~---~~~~ 138 (534)
+.|-=.+|.+.... +.+=+||+.+|+|+. ++|+.+.+++.-|. ||+.|..+| |.. |. .+.+ .+..
T Consensus 424 ~~~r~~~y~~~~~L--~~~v~~il~vD~dT~-~~P~ai~~lv~~f~~dp~VggaCG--~I~----~~--~~~w~v~~Q~F 492 (862)
T KOG2571|consen 424 NQHRWVMYTAFKAL--MPSVDYILVVDADTR-LDPDALYHLVKVFDEDPQVGGACG--RIL----NK--GGSWVVAYQNF 492 (862)
T ss_pred HHHHHHHHHHHHHh--cCcceEEEEecCCCc-cCcHHHHHHHHHhccCcccceecc--ccc----cC--CCceEEeHHHH
Confidence 34444555555553 355679999999996 77999999999996 787554444 222 21 1211 1111
Q ss_pred HHh-hhhhHhhhhhcCCcccc--cceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhH
Q 009443 139 RSG-YRLQWPGMDGLKGPFLT--GTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVL 215 (534)
Q Consensus 139 ~~f-~~~~~~g~d~~~~~~~~--Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~ 215 (534)
+.. -...+++-+..=|-+.| |.=+++|-+||++... +..||.
T Consensus 493 EY~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~---------~~~y~~-------------------------- 537 (862)
T KOG2571|consen 493 EYAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV---------EYFYGE-------------------------- 537 (862)
T ss_pred HHHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH---------Hhhhch--------------------------
Confidence 111 12234444443344444 5555699999965211 111111
Q ss_pred HhhhccccccccccccccccccccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhcccc
Q 009443 216 QQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASG 292 (534)
Q Consensus 216 l~~a~~v~~c~ye~~t~wg~~vG~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~G 292 (534)
+.-|.+=|..+ +..||-.+..++..+||+..||.+ +.+...+|+++.+++.||+||..|
T Consensus 538 ---------------~~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 538 ---------------KFSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ---------------hhcCccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 00001124333 599999999999999999999998 678999999999999999999999
No 59
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.65 E-value=1.6e-07 Score=87.74 Aligned_cols=134 Identities=13% Similarity=0.093 Sum_probs=82.2
Q ss_pred cceEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHH
Q 009443 22 STIIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 100 (534)
Q Consensus 22 ~~~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l 100 (534)
+-.|-|+.++++++. ...+......|.++++..+++ .+|++|+|.+++. +.||+++++|+|.. ..|+.|
T Consensus 28 ~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~-~~~~~l 97 (185)
T cd04179 28 DYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQ-HPPEDI 97 (185)
T ss_pred CEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCC-----CCccHHHHHHHHH----hcCCEEEEEeCCCC-CCHHHH
Confidence 444545545554432 233445667788888877766 4799999999999 89999999999996 569999
Q ss_pred HHHHHHhcCCCCCCceEEEcCCccccCCCccchH-HHHHHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 101 RQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIY-DGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 101 ~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~-~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
.+++..+.+++ ..+|+.+....+.....+. .......+................|...++||+++
T Consensus 98 ~~l~~~~~~~~----~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 163 (185)
T cd04179 98 PKLLEKLLEGG----ADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVL 163 (185)
T ss_pred HHHHHHHhccC----CcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHH
Confidence 99998865433 4666666655442111111 11111111111111122223344566678999999
No 60
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.65 E-value=2.4e-08 Score=90.27 Aligned_cols=138 Identities=16% Similarity=0.063 Sum_probs=83.0
Q ss_pred cCcceEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchH
Q 009443 20 NHSTIIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPT 98 (534)
Q Consensus 20 dh~~~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~ 98 (534)
+++..|-|+.|++.++. .++.......+++.|+.++++ .++++|+|.+++. +.++||+++|+|.++ .|+
T Consensus 25 ~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~-~~~ 94 (169)
T PF00535_consen 25 DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPEN-----LGFSAARNRGIKH----AKGEYILFLDDDDII-SPD 94 (169)
T ss_dssp GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TT
T ss_pred CCCEEEEEecccccccccccccccccccccccccccccc-----ccccccccccccc----cceeEEEEeCCCceE-cHH
Confidence 44444544445553332 223333335789999999876 4899999999999 899999999999974 589
Q ss_pred HHHHHHHHhcCCCCCCceEEEcCCccccCCCccchHHH--HHHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 99 SARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDG--SLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 99 ~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~--~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
++.+++..+.++. .++.....+....+......... .....+............++++|+++++||+++
T Consensus 95 ~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 165 (169)
T PF00535_consen 95 WLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVF 165 (169)
T ss_dssp HHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHH
T ss_pred HHHHHHHHHHhCC--CcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHH
Confidence 9999999998632 22332222222221111000000 001122233344455667889999999999998
No 61
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.61 E-value=2e-07 Score=97.32 Aligned_cols=83 Identities=22% Similarity=0.188 Sum_probs=60.9
Q ss_pred CcccCcc-eEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCC
Q 009443 17 NSRNHST-IIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 94 (534)
Q Consensus 17 ~~~dh~~-~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~ 94 (534)
..|++++ .|-|+.|++.|+. .+++......|++.+++.+ | .+.++|.|.+++. ++||||+.+|+|..+
T Consensus 29 ~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~-n-----~G~~~arN~gl~~----a~g~yi~flD~DD~~ 98 (328)
T PRK10073 29 IAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQA-N-----AGVSVARNTGLAV----ATGKYVAFPDADDVV 98 (328)
T ss_pred HhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECC-C-----CChHHHHHHHHHh----CCCCEEEEECCCCcc
Confidence 4555554 3334446665543 3445556678999998643 3 5899999999999 999999999999975
Q ss_pred CchHHHHHHHHHhcCC
Q 009443 95 NDPTSARQAMCFHLDP 110 (534)
Q Consensus 95 ~~p~~l~~~~~~f~dp 110 (534)
.|+.+++++..+.++
T Consensus 99 -~p~~l~~l~~~~~~~ 113 (328)
T PRK10073 99 -YPTMYETLMTMALED 113 (328)
T ss_pred -ChhHHHHHHHHHHhC
Confidence 599999999877543
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.48 E-value=1.8e-06 Score=80.92 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=76.8
Q ss_pred EEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 009443 25 IEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (534)
Q Consensus 25 i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~ 103 (534)
|-|+.|++.++. ..........|++.++..+++ .+|++|+|.+++. +.+|+|+.+|+|.. .+|+++.++
T Consensus 32 iivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~n~g~~~----a~~d~i~~~D~D~~-~~~~~l~~l 101 (181)
T cd04187 32 IIFVDDGSTDRTLEILRELAARDPRVKVIRLSRN-----FGQQAALLAGLDH----ARGDAVITMDADLQ-DPPELIPEM 101 (181)
T ss_pred EEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCC-----CCcHHHHHHHHHh----cCCCEEEEEeCCCC-CCHHHHHHH
Confidence 334445554432 233445556788999877654 5799999999999 89999999999996 569999999
Q ss_pred HHHhcCCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeecccc
Q 009443 104 MCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESL 169 (534)
Q Consensus 104 ~~~f~dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL 169 (534)
+..+ +++ .++.+.. ....+ ...........+........+..-+...|+..++||+++
T Consensus 102 ~~~~-~~~--~~~v~g~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 159 (181)
T cd04187 102 LAKW-EEG--YDVVYGV--RKNRK---ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVV 159 (181)
T ss_pred HHHH-hCC--CcEEEEE--ecCCc---chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHH
Confidence 9874 332 2233222 11111 111221111111111222233334556788889999999
No 63
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.38 E-value=7.1e-06 Score=82.34 Aligned_cols=46 Identities=17% Similarity=0.063 Sum_probs=36.1
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~ 103 (534)
+++.+++. ++ +++++|+|.|++. +.||||+.+|+|.. .+|+.++..
T Consensus 58 ~~i~~i~~-~~-----~G~~~A~N~Gi~~----a~g~~v~~ld~DD~-~~~~~~~~~ 103 (248)
T PRK10063 58 FNLRFVSE-PD-----NGIYDAMNKGIAM----AQGRFALFLNSGDI-FHQDAANFV 103 (248)
T ss_pred CCEEEEEC-CC-----CCHHHHHHHHHHH----cCCCEEEEEeCCcc-cCcCHHHHH
Confidence 35778753 23 4899999999999 89999999999986 458776543
No 64
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.37 E-value=5.6e-06 Score=85.36 Aligned_cols=174 Identities=16% Similarity=0.115 Sum_probs=106.5
Q ss_pred CcccCcceEEEEECCCCChhhhHHhhhhc-CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCC-EEEEeCCCCCC
Q 009443 17 NSRNHSTIIEIIQDTSGENETIRQADLVE-MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSP-YILGLDCDMYC 94 (534)
Q Consensus 17 ~~~dh~~~i~vi~~~~~~~~~~~~~~~~~-~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~-~Il~lDaD~~~ 94 (534)
..++.+....|+.||+..+.. .+..... .|++.++.-.+| -+=||+.|.+++... .+++ |++.++-|.+
T Consensus 26 ~~~~~~~~~iv~vDn~s~d~~-~~~~~~~~~~~v~~i~~~~N-----lG~agg~n~g~~~a~--~~~~~~~l~LN~D~~- 96 (305)
T COG1216 26 AAQTYPDDVIVVVDNGSTDGS-LEALKARFFPNVRLIENGEN-----LGFAGGFNRGIKYAL--AKGDDYVLLLNPDTV- 96 (305)
T ss_pred hcCCCCCcEEEEccCCCCCCC-HHHHHhhcCCcEEEEEcCCC-----ccchhhhhHHHHHHh--cCCCcEEEEEcCCee-
Confidence 455555555455666554332 2222333 799999988777 466889999998832 4444 9999999975
Q ss_pred CchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCc-cchHHHHHHHhhhhhHh---h--hhhcC----C-cccccceee
Q 009443 95 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNE-HDIYDGSLRSGYRLQWP---G--MDGLK----G-PFLTGTGHY 163 (534)
Q Consensus 95 ~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~-~d~~~~~~~~f~~~~~~---g--~d~~~----~-~~~~Gtg~~ 163 (534)
.+|++|.+++..+.+. +..+.|+.....++... .+..+.....+...... . ..... . +.++|.+++
T Consensus 97 ~~~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l 173 (305)
T COG1216 97 VEPDLLEELLKAAEED---PAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVASLSGACLL 173 (305)
T ss_pred eChhHHHHHHHHHHhC---CCCeEeeeeEecCCCCcchheeccccccccccceecccccccccccchhhhhhhcceeeeE
Confidence 6799999999988632 23676665554433211 00000000000000000 0 00000 0 146888899
Q ss_pred eeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccc-cCC-
Q 009443 164 IRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG-FSY- 241 (534)
Q Consensus 164 ~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG-~~~- 241 (534)
+||+++ +++| |++
T Consensus 174 i~~~~~-----------------------------------------------------------------~~vG~~de~ 188 (305)
T COG1216 174 IRREAF-----------------------------------------------------------------EKVGGFDER 188 (305)
T ss_pred EcHHHH-----------------------------------------------------------------HHhCCCCcc
Confidence 999999 4554 443
Q ss_pred -CcccchHHHHHHHHhCCCEEEEeCCC
Q 009443 242 -QSVSEDFFTGFILHCKGWTSTYLDPS 267 (534)
Q Consensus 242 -~svtED~~t~~~l~~~Gwrs~y~~~~ 267 (534)
-.-.||++.+.|+...||++.|+|..
T Consensus 189 ~F~y~eD~D~~~R~~~~G~~i~~~p~a 215 (305)
T COG1216 189 FFIYYEDVDLCLRARKAGYKIYYVPDA 215 (305)
T ss_pred cceeehHHHHHHHHHHcCCeEEEeecc
Confidence 23489999999999999999999974
No 65
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.34 E-value=4.8e-06 Score=73.28 Aligned_cols=62 Identities=27% Similarity=0.253 Sum_probs=46.5
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCCceEEEcCC
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFP 122 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~p 122 (534)
+...++.++++ .+|++++|.+++. .++|+++++|+|.+ .+|+++...+..+ .+++ ...|+++
T Consensus 52 ~~~~~~~~~~~-----~g~~~~~~~~~~~----~~~d~v~~~d~D~~-~~~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 52 PRVIRVINEEN-----QGLAAARNAGLKA----ARGEYILFLDADDL-LLPDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred CCeEEEEecCC-----CChHHHHHHHHHH----hcCCEEEEECCCCc-cCccHHHHHHHHHhcCCC----ceEEecc
Confidence 45566655443 6899999999999 78999999999997 5699998874443 4443 6667655
No 66
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.34 E-value=3.9e-06 Score=85.89 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=57.8
Q ss_pred CcccCcce-EEEEECCCCChhhhHHhh--hhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 009443 17 NSRNHSTI-IEIIQDTSGENETIRQAD--LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY 93 (534)
Q Consensus 17 ~~~dh~~~-i~vi~~~~~~~~~~~~~~--~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~ 93 (534)
..|++++. |-|+.|++.+.+ ..... ....|++.|+..+++ .+++.|+|.|++. ++||||+.+|+|.+
T Consensus 28 l~Qt~~~~EiIVVDDgS~~~~-~~~~~~~~~~~~ri~~i~~~~n-----~G~~~a~N~gi~~----a~g~~I~~lDaDD~ 97 (279)
T PRK10018 28 LRQDYSNWEMIIVDDCSTSWE-QLQQYVTALNDPRITYIHNDIN-----SGACAVRNQAIML----AQGEYITGIDDDDE 97 (279)
T ss_pred HhCCCCCeEEEEEECCCCCHH-HHHHHHHHcCCCCEEEEECCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC
Confidence 45677753 223445554322 22221 224679999987655 6899999999999 99999999999997
Q ss_pred CCchHHHHHHHHHhc
Q 009443 94 CNDPTSARQAMCFHL 108 (534)
Q Consensus 94 ~~~p~~l~~~~~~f~ 108 (534)
.+ |+.|.+.+.++.
T Consensus 98 ~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 98 WT-PNRLSVFLAHKQ 111 (279)
T ss_pred CC-ccHHHHHHHHHH
Confidence 55 999999888764
No 67
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.02 E-value=0.00016 Score=75.89 Aligned_cols=76 Identities=22% Similarity=0.193 Sum_probs=54.4
Q ss_pred eEEEEECCCCChh-hhHHhhhhc----CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchH
Q 009443 24 IIEIIQDTSGENE-TIRQADLVE----MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPT 98 (534)
Q Consensus 24 ~i~vi~~~~~~~~-~~~~~~~~~----~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~ 98 (534)
.|-|+.|+|.|+. .+....... .+++.++..++| .+|++|+|.+++. +.||+|+++|||.. .+|+
T Consensus 109 EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N-----~G~~~A~~~Gi~~----a~gd~I~~~DaD~~-~~~~ 178 (333)
T PTZ00260 109 EIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN-----KGKGGAVRIGMLA----SRGKYILMVDADGA-TDID 178 (333)
T ss_pred EEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC-----CChHHHHHHHHHH----ccCCEEEEEeCCCC-CCHH
Confidence 4445556666642 122222222 246888876655 5899999999999 89999999999996 6699
Q ss_pred HHHHHHHHhcC
Q 009443 99 SARQAMCFHLD 109 (534)
Q Consensus 99 ~l~~~~~~f~d 109 (534)
.+.+++..+.+
T Consensus 179 ~l~~l~~~l~~ 189 (333)
T PTZ00260 179 DFDKLEDIMLK 189 (333)
T ss_pred HHHHHHHHHHH
Confidence 99888887753
No 68
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.85 E-value=2.4e-05 Score=81.24 Aligned_cols=197 Identities=20% Similarity=0.290 Sum_probs=127.6
Q ss_pred CCcccCcceEEEEECCCCChh-hhHHhhhhcCCcE---EEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 16 GNSRNHSTIIEIIQDTSGENE-TIRQADLVEMPLL---VYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 16 ~~~~dh~~~i~vi~~~~~~~~-~~~~~~~~~~p~l---~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
++.+-|+-.+---.++++|++ +.+....+.+|+| ..+.-|+- + -+-|-.|+=-|.+. .+.|+|++.|.|
T Consensus 108 fts~Y~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~v-g--~npKInN~mpgy~~----a~ydlvlisDsg 180 (431)
T KOG2547|consen 108 FTSQYHKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKV-G--LNPKINNMMPGYRA----AKYDLVLISDSG 180 (431)
T ss_pred HhhccCceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEccccc-c--cChhhhccCHHHHH----hcCCEEEEecCC
Confidence 355666533322335555542 2223456688876 45555543 2 45688888889998 899999999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCCceEEE-cCCccccCCCccchHHHHH-HHhhhhhHhh----hhhcCCcccccceeeee
Q 009443 92 MYCNDPTSARQAMCFHLDPKTSSSLAFV-QFPQKFHNFNEHDIYDGSL-RSGYRLQWPG----MDGLKGPFLTGTGHYIR 165 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~dp~~~~~v~~V-Q~pq~f~n~~~~d~~~~~~-~~f~~~~~~g----~d~~~~~~~~Gtg~~~R 165 (534)
-.+- ||.+.++..-|+.++ ++|+| |+|--++- .. +.... .++|...++. -+-.+--+..|-.|+.|
T Consensus 181 I~m~-pdtildm~t~M~she---kmalvtq~py~~dr-~G---f~atle~~~fgTsh~r~yl~~n~~~~~c~tgms~~mr 252 (431)
T KOG2547|consen 181 IFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDR-QG---FDATLEQVYFGTSHPRIYLSGNVLGFNCSTGMSSMMR 252 (431)
T ss_pred eeec-CchHHHHHHhhhccc---ceeeecCCceeecc-cc---chhhhhheeeccCCceEEEccccccccccccHHHHHH
Confidence 9864 999999998888554 58988 77755432 11 21111 1444443321 12222234467777889
Q ss_pred ccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccccCCCccc
Q 009443 166 RESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVS 245 (534)
Q Consensus 166 R~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG~~~~svt 245 (534)
+++| | .|+|- .+.|+ .+.
T Consensus 253 K~~l---------d--------------------------------------------~~ggi------~~f~~---yLa 270 (431)
T KOG2547|consen 253 KEAL---------D--------------------------------------------ECGGI------SAFGG---YLA 270 (431)
T ss_pred HHHH---------H--------------------------------------------HhccH------HHHHH---HHH
Confidence 9988 2 01111 12333 689
Q ss_pred chHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHHHhhhhccc
Q 009443 246 EDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWAS 291 (534)
Q Consensus 246 ED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l~Qr~RWa~ 291 (534)
||.-.+-.+..+||++.+... ++-...+--+...+..|-.||..
T Consensus 271 edyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 271 EDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 999999999999999999876 45456666788888888899964
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.84 E-value=0.0024 Score=66.81 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=52.9
Q ss_pred eEEEEECCCCChhh-hHHhhhhc-CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHH
Q 009443 24 IIEIIQDTSGENET-IRQADLVE-MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSAR 101 (534)
Q Consensus 24 ~i~vi~~~~~~~~~-~~~~~~~~-~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~ 101 (534)
.|-|+.|++.|+.. +....... .++++.+..+++ .+|++|+|++++. ++||+++.+|||.. .+|+.+.
T Consensus 40 EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n-----~G~~~A~~~G~~~----A~gd~vv~~DaD~q-~~p~~i~ 109 (325)
T PRK10714 40 EILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRN-----YGQHSAIMAGFSH----VTGDLIITLDADLQ-NPPEEIP 109 (325)
T ss_pred EEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCC-----CCHHHHHHHHHHh----CCCCEEEEECCCCC-CCHHHHH
Confidence 34355566666431 22222222 356666655443 5899999999999 89999999999997 5699999
Q ss_pred HHHHHhc
Q 009443 102 QAMCFHL 108 (534)
Q Consensus 102 ~~~~~f~ 108 (534)
+++..+.
T Consensus 110 ~l~~~~~ 116 (325)
T PRK10714 110 RLVAKAD 116 (325)
T ss_pred HHHHHHH
Confidence 9998875
No 70
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=97.69 E-value=0.00033 Score=72.65 Aligned_cols=52 Identities=25% Similarity=0.238 Sum_probs=43.8
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcC
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 121 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~ 121 (534)
..+|++|+|.+++. ++||+|+++|||....+|+++.+++..+. ||+ +++|.+
T Consensus 100 n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 100 RPGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred CCCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCCC----ceEEEE
Confidence 36899999999998 89999999999995357999999998886 665 666654
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=96.04 E-value=0.03 Score=55.00 Aligned_cols=72 Identities=17% Similarity=0.153 Sum_probs=50.5
Q ss_pred eEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 009443 24 IIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (534)
Q Consensus 24 ~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~ 103 (534)
.|-|+.+++.|.. . +... -+++.++.. + ..+++.+.|.|++. +.+|+|+++|+|.. .+|+.+.++
T Consensus 28 eiivvD~gStD~t-~-~i~~--~~~~~v~~~-~-----~~g~~~~~n~~~~~----a~~d~vl~lDaD~~-~~~~~~~~l 92 (229)
T cd02511 28 EIIVVDSGSTDRT-V-EIAK--EYGAKVYQR-W-----WDGFGAQRNFALEL----ATNDWVLSLDADER-LTPELADEI 92 (229)
T ss_pred EEEEEeCCCCccH-H-HHHH--HcCCEEEEC-C-----CCChHHHHHHHHHh----CCCCEEEEEeCCcC-cCHHHHHHH
Confidence 4546656655542 1 1111 235556655 2 35789999999999 89999999999997 559999999
Q ss_pred HHHhcCC
Q 009443 104 MCFHLDP 110 (534)
Q Consensus 104 ~~~f~dp 110 (534)
...+.++
T Consensus 93 ~~~~~~~ 99 (229)
T cd02511 93 LALLATD 99 (229)
T ss_pred HHHHhCC
Confidence 8887643
No 72
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=96.01 E-value=0.19 Score=58.07 Aligned_cols=73 Identities=23% Similarity=0.258 Sum_probs=53.5
Q ss_pred cccchHHHHHHHHhCCCEEEEeCCCCCceeeccCC-CHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHH
Q 009443 243 SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT-NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG 320 (534)
Q Consensus 243 svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~-~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~ 320 (534)
+++||+..|+...+||-++.||.- ...|-.-+ .+.+-+.=..+=+.|+=|..+||.--.+. .+|.+-.-|.+.
T Consensus 409 hLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg--~~ld~~R~LSfy 482 (817)
T PF02364_consen 409 HLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG--TRLDFFRFLSFY 482 (817)
T ss_pred cccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhhHhHhcCCccchhhhHHHHHhh--ccCCHHHHHHHH
Confidence 689999999999999999999874 33444333 45555555667789999999988655553 578877666543
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=95.25 E-value=0.43 Score=46.06 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=56.0
Q ss_pred ceEEEEECCCCChh-hhHHhhh--hcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHH
Q 009443 23 TIIEIIQDTSGENE-TIRQADL--VEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTS 99 (534)
Q Consensus 23 ~~i~vi~~~~~~~~-~~~~~~~--~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~ 99 (534)
..|-|+.|++.|.. ...+..+ ...+++....|++. -+-.-|.-+++.+ +.|||+++.|||- ..+|.+
T Consensus 36 ~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDl-sHhPk~ 105 (238)
T KOG2978|consen 36 YEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADL-SHHPKF 105 (238)
T ss_pred eEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCcc-CCCchh
Confidence 34556667766542 1223333 46789999999765 4566788899999 9999999999999 578999
Q ss_pred HHHHHHHhcC
Q 009443 100 ARQAMCFHLD 109 (534)
Q Consensus 100 l~~~~~~f~d 109 (534)
+-+.+...-+
T Consensus 106 ipe~i~lq~~ 115 (238)
T KOG2978|consen 106 IPEFIRLQKE 115 (238)
T ss_pred HHHHHHHhhc
Confidence 9887765543
No 74
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=95.09 E-value=0.11 Score=46.49 Aligned_cols=75 Identities=20% Similarity=0.161 Sum_probs=48.5
Q ss_pred CcccCcc-eEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCC
Q 009443 17 NSRNHST-IIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 94 (534)
Q Consensus 17 ~~~dh~~-~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~ 94 (534)
..|.+++ .|-|+.|++.|+. .++.......+.+.+...+++ .+++.|+|.++.. +.+|+|+.+|+|.+
T Consensus 26 ~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~----~~~~~~~~~d~d~~- 95 (291)
T COG0463 26 LNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERN-----GGLGAARNAGLEY----ARGDYIVFLDADDQ- 95 (291)
T ss_pred HhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccC-----CChHHHHHhhHHh----ccCCEEEEEccCCC-
Confidence 4566665 4445556666552 223323322345555554443 6899999999999 88899999999997
Q ss_pred CchHHHHH
Q 009443 95 NDPTSARQ 102 (534)
Q Consensus 95 ~~p~~l~~ 102 (534)
. |+.+..
T Consensus 96 ~-~~~~~~ 102 (291)
T COG0463 96 H-PPELIP 102 (291)
T ss_pred C-CHHHHH
Confidence 6 455444
No 75
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=88.53 E-value=0.68 Score=45.71 Aligned_cols=58 Identities=12% Similarity=0.213 Sum_probs=42.9
Q ss_pred EEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCCceEEE
Q 009443 49 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFV 119 (534)
Q Consensus 49 l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f-~dp~~~~~v~~V 119 (534)
+..+++++. ..-|-++|.|++. ++++|++.+.-|..+.+++++.+++..| .||+ +|.+
T Consensus 31 i~i~~~~~~-----~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~----~G~i 89 (217)
T PF13712_consen 31 IEIDNVRNA-----KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN----IGMI 89 (217)
T ss_dssp EEEE-SSS------S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT----EEEE
T ss_pred EEEeccCCC-----cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC----ccEE
Confidence 445555433 4678899999999 9999999999999999999999999999 7776 6655
No 76
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=84.91 E-value=3.1 Score=41.29 Aligned_cols=53 Identities=11% Similarity=-0.114 Sum_probs=35.7
Q ss_pred cchHHHHHHHHhCCCEEEEeCCCCC----------ceeeccCCCHHHHHHhhhhcccccchhh
Q 009443 245 SEDFFTGFILHCKGWTSTYLDPSRP----------QFLGTSTTNLNDVLIQGTRWASGLIDVS 297 (534)
Q Consensus 245 tED~~t~~~l~~~Gwrs~y~~~~~~----------~~~g~aP~~l~~~l~Qr~RWa~G~~qi~ 297 (534)
.||-+.+.||...|.+....+.... .-....|.-+.....+++||+...+.-+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 6999999999999988665443211 0022344556666778888988777544
No 77
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=80.24 E-value=12 Score=39.53 Aligned_cols=45 Identities=20% Similarity=0.242 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHH---HHHHHHhc-CCCCCCceEEEcC
Q 009443 68 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA---RQAMCFHL-DPKTSSSLAFVQF 121 (534)
Q Consensus 68 aLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l---~~~~~~f~-dp~~~~~v~~VQ~ 121 (534)
|+|.+... .++++++++|.|.+ +.|+|+ ++++..+. || .+..|-+
T Consensus 88 aln~vF~~----~~~~~vIILEDDl~-~sPdFf~yf~~~l~~y~~D~----~v~~ISa 136 (334)
T cd02514 88 ALTQTFNL----FGYSFVIILEDDLD-IAPDFFSYFQATLPLLEEDP----SLWCISA 136 (334)
T ss_pred HHHHHHHh----cCCCEEEEECCCCc-cCHhHHHHHHHHHHHHhcCC----CEEEEEe
Confidence 88888887 78999999999996 669965 77787765 44 4777754
No 78
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=78.22 E-value=14 Score=38.16 Aligned_cols=93 Identities=19% Similarity=0.171 Sum_probs=57.6
Q ss_pred EEEEECCCCChhh-hH-Hhh-hhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC--CCCchHH
Q 009443 25 IEIIQDTSGENET-IR-QAD-LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM--YCNDPTS 99 (534)
Q Consensus 25 i~vi~~~~~~~~~-~~-~~~-~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~--~~~~p~~ 99 (534)
+-|..|++.|... ++ +.- -.+.-++..+.-.+| .+|.||..-++-. +.|+++++.|||- -+++-+.
T Consensus 107 iiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~n-----rgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ek 177 (323)
T KOG2977|consen 107 IIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKN-----RGKGGAVRKGMLS----SRGQKILFADADGATKFADLEK 177 (323)
T ss_pred EEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhcc-----CCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHH
Confidence 4466677776532 11 111 124456777766555 6899999988888 8999999999996 2355677
Q ss_pred HHHHHHHhcCCCCCCceEEEcCCccccC
Q 009443 100 ARQAMCFHLDPKTSSSLAFVQFPQKFHN 127 (534)
Q Consensus 100 l~~~~~~f~dp~~~~~v~~VQ~pq~f~n 127 (534)
|.++|.-...|...+.++ +-+|-...|
T Consensus 178 Le~al~~~~~p~~r~~va-~GsrahLe~ 204 (323)
T KOG2977|consen 178 LEKALNDKAGPGPRDDVA-CGSRAHLEN 204 (323)
T ss_pred HHHHHHhhcCCCCCCcee-ecCHHHhhc
Confidence 888776444343223333 344444433
No 79
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=74.50 E-value=18 Score=38.84 Aligned_cols=40 Identities=13% Similarity=-0.001 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 65 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 65 KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
....+-+|++. -+.|+|++.|||+=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 45678888887 34599999999974446899988887654
No 80
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=72.83 E-value=8.2 Score=32.27 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=36.3
Q ss_pred EEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 009443 25 IEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 95 (534)
Q Consensus 25 i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~ 95 (534)
+-|+.+++.|+. ......+|.+..+...... .....+...+|.+.+.. .+++.++.+|||-++.
T Consensus 22 i~i~d~~s~D~t---~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~---~~~dWvl~~D~DEfl~ 85 (97)
T PF13704_consen 22 IYIYDDGSTDGT---REILRALPGVGIIRWVDPY-RDERRQRAWRNALIERA---FDADWVLFLDADEFLV 85 (97)
T ss_pred EEEEECCCCccH---HHHHHhCCCcEEEEeCCCc-cchHHHHHHHHHHHHhC---CCCCEEEEEeeeEEEe
Confidence 445656666542 1123445777776665432 11223444555555431 5789999999998754
No 81
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=68.40 E-value=5.2 Score=33.05 Aligned_cols=22 Identities=18% Similarity=-0.136 Sum_probs=15.8
Q ss_pred cchHHHHHHHHhCCCEEEEeCC
Q 009443 245 SEDFFTGFILHCKGWTSTYLDP 266 (534)
Q Consensus 245 tED~~t~~~l~~~Gwrs~y~~~ 266 (534)
-||.+.+.|+..+|.+....+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 4999999999999999777655
No 82
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=67.29 E-value=7.5 Score=40.65 Aligned_cols=45 Identities=27% Similarity=0.325 Sum_probs=31.3
Q ss_pred HHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEE
Q 009443 70 NVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFV 119 (534)
Q Consensus 70 N~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~V 119 (534)
|.|++. +..+||+++|+|++ |.+++-++...+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~-ps~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFL-PSPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceee-eCcchHHHHHHHhhhhccCCceEEE
Confidence 445555 78999999999995 7788777666655432234557776
No 83
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=64.74 E-value=60 Score=33.37 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=53.3
Q ss_pred EEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH
Q 009443 27 IIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (534)
Q Consensus 27 vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~ 106 (534)
+.+++.....+.+...-..+|++.|+.-........- +--=|+|...|-.--+..+|+.+|+|++.. .|-..+.+..
T Consensus 42 i~~~~~~~~d~~i~~~i~~~~~~~yl~~~s~~~F~s~--~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~ 118 (346)
T COG4092 42 ICLRAHEVMDRLIRSYIDPMPRVLYLDFGSPEPFASE--TICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSI 118 (346)
T ss_pred EEEecchhHHHHHHHHhccccceEEEecCCCccccch--hhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHH
Confidence 4445554444444455667999999986443211111 334455665532223589999999999866 3444444422
Q ss_pred hcCCCCCCce-EEEcCCccccCC
Q 009443 107 HLDPKTSSSL-AFVQFPQKFHNF 128 (534)
Q Consensus 107 f~dp~~~~~v-~~VQ~pq~f~n~ 128 (534)
-.-.+....+ |+.--|..|-|.
T Consensus 119 ~~ikk~~tnI~a~~vlPV~~LNk 141 (346)
T COG4092 119 ATIKKMRTNIDAPLVLPVYHLNK 141 (346)
T ss_pred HHHHHHHhccCcceeeeeeecch
Confidence 1111111223 555567676664
No 84
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=60.60 E-value=5.7 Score=42.47 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=39.8
Q ss_pred EEECCCCChhhhH---HhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 009443 27 IIQDTSGENETIR---QADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (534)
Q Consensus 27 vi~~~~~~~~~~~---~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~ 103 (534)
|++|+-.|++.+. |..-...-+++-|-|.++- -|-+|+ -..-+..+.|+.++.+||-+-++ -+++--+
T Consensus 191 vlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~R-------EGLI~a-RSiGA~~atGeV~ifLDAHCEVn-tNWlpPL 261 (603)
T KOG3737|consen 191 VLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERR-------EGLIQA-RSIGAQKATGEVLIFLDAHCEVN-TNWLPPL 261 (603)
T ss_pred EEeccCCccHHHHHHHHHHHHHhcCEEEEEecchh-------hhhhhh-hccchhhccccEEEEEecceeee-ccccccc
Confidence 4445555554433 3445567788888786651 222222 11111227899999999999776 5666444
Q ss_pred H
Q 009443 104 M 104 (534)
Q Consensus 104 ~ 104 (534)
+
T Consensus 262 l 262 (603)
T KOG3737|consen 262 L 262 (603)
T ss_pred c
Confidence 4
No 85
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=47.48 E-value=3.7e+02 Score=33.90 Aligned_cols=86 Identities=19% Similarity=0.183 Sum_probs=50.6
Q ss_pred cccchHHHHHHHHhCCCEEEEeCCCCCceeeccCC-CHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHh
Q 009443 243 SVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT-NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGE 321 (534)
Q Consensus 243 svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~-~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~ 321 (534)
.++||+..|+.-..||-++.+|+- ...|-.-+ .+.+-..=-.+=+.|+=|-.+||.--.+. .++.+-.-|.+..
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG--~~ldffRmLSfyf 1247 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLG--TQLDFFRMLSFYF 1247 (1679)
T ss_pred ccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhc--ccccHHHHHHHHh
Confidence 689999999999999999988863 11221111 22222222234488988888887644442 4677766664333
Q ss_pred HhHhhHHhHHHH
Q 009443 322 MSLFPLLYCLPL 333 (534)
Q Consensus 322 ~~~~~~~~~~~~ 333 (534)
.+.-.+++++..
T Consensus 1248 tt~GF~~n~m~i 1259 (1679)
T KOG0916|consen 1248 TTVGFYFNNMFI 1259 (1679)
T ss_pred ccccHHHHhHHH
Confidence 232222555543
No 86
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=42.35 E-value=40 Score=34.03 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=22.3
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 009443 80 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 111 (534)
Q Consensus 80 s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~ 111 (534)
++.+..+.+|-|+++. ++-|++.+.-+ ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 5779999999999976 88888877665 454
No 87
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=41.41 E-value=1.9e+02 Score=27.73 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=39.1
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
..+.++.++. ..+.++++-+++.... .+.+.+++++||+..-+++.+.+++..+.+
T Consensus 62 ~~~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 62 PNVEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred CCcEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 3566766532 2468999999998732 136889999999932347888888877753
No 88
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=40.03 E-value=1.5e+02 Score=27.47 Aligned_cols=54 Identities=13% Similarity=-0.025 Sum_probs=37.4
Q ss_pred cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 48 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 48 ~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
.+.++..+.. ..+-++++..+++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 63 ~v~~v~~~~~----~~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 63 NITLVHNPQY----AEGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred CeEEEECcCh----hcCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 5666655421 23566778888872 156789999999994345889999887665
No 89
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=39.29 E-value=1.5e+02 Score=28.43 Aligned_cols=42 Identities=14% Similarity=-0.018 Sum_probs=32.8
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
.+-..++-.+++. .+.+++++++||+-.-+++.+++++....
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 3455678888887 56799999999996667899988887664
No 90
>PF15050 SCIMP: SCIMP protein
Probab=35.97 E-value=48 Score=29.76 Aligned_cols=51 Identities=14% Similarity=0.309 Sum_probs=27.1
Q ss_pred cccchhhHHHHHHHHHHHHHH-----HHHHHHHHcCcccceeeccC--Ccchhhhhhhc
Q 009443 386 TWRNEQRIWMIKSVTSHFYGS-----MDAIMKLLGLRKASFLPTNK--VLDNEQVKRYE 437 (534)
Q Consensus 386 ~ww~~~~~w~~~~~~~~~~~~-----~~~l~~~lg~~~~~F~VT~K--~~~~~~~~~y~ 437 (534)
+||++ .||+|.++..-+..+ +-.+.+.+..++.+|+++.- ..+++..++|+
T Consensus 2 ~WWr~-nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp~k~~~rdeEkmYE 59 (133)
T PF15050_consen 2 SWWRD-NFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKPLKQKQRDEEKMYE 59 (133)
T ss_pred chHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccchhhhcccHHHHHH
Confidence 58876 488887653322211 11223344446778888863 33444445564
No 91
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=35.18 E-value=1.8e+02 Score=26.78 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f 107 (534)
..+-.+.+..+++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 35677899999998 5689999999999444689998888766
No 92
>KOG1183 consensus N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=33.24 E-value=7.1e+02 Score=28.23 Aligned_cols=27 Identities=22% Similarity=0.280 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCChhH
Q 009443 488 LYILIINFAIVEGMIVRKDKGRISPSA 514 (534)
Q Consensus 488 ~w~~~~l~p~~~al~~r~~~~~~P~~~ 514 (534)
+-.+.|..|++.-+..=+|++|+|.-+
T Consensus 506 ~ia~inhfPLfalmlrL~~pyR~P~Gv 532 (623)
T KOG1183|consen 506 FIALINHFPLFALMLRLKRPYRLPAGV 532 (623)
T ss_pred HHHHhhcchHHHHHHHHhccccCCCcc
Confidence 345567789988888779999999654
No 93
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=32.02 E-value=1.4e+02 Score=28.40 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=36.2
Q ss_pred hhhhcCCcEEEEEccCCCCCCCCChH-HHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH
Q 009443 41 ADLVEMPLLVYVSREKSPEHLHHFKG-GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (534)
Q Consensus 41 ~~~~~~p~l~Yv~Rek~p~~~~~~KA-GaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~ 106 (534)
.+..++-.+....-++.-.. ...|. .+++.+.+.. .+.+||+-.|-|.+++ ++.|.+.+.-
T Consensus 43 ~E~~~y~Dil~~d~~D~y~n-lt~K~~~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~ 104 (195)
T PF01762_consen 43 EEAEKYGDILQGDFVDSYRN-LTLKTLAGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKS 104 (195)
T ss_pred hhhhhcCceEeeecccccch-hhHHHHHHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhh
Confidence 35555666666555443111 12233 4566666551 4589999999999865 7766655543
No 94
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=30.02 E-value=1.4e+02 Score=31.99 Aligned_cols=56 Identities=29% Similarity=0.482 Sum_probs=35.8
Q ss_pred CCcEEEEEccCCCCCCC-------CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 009443 46 MPLLVYVSREKSPEHLH-------HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 103 (534)
Q Consensus 46 ~p~l~Yv~Rek~p~~~~-------~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~ 103 (534)
.+.+.|+.-+..|.... .+.-.+|+..++..+ +.++|+|++-|.|.+ |+|+.|+.+
T Consensus 137 ~~KIiy~~l~~~~~~g~~~~w~~E~~qR~~l~~l~~~~~-~~~dDliivSDvDEI-P~p~~l~~L 199 (356)
T PF04724_consen 137 HDKIIYVTLDDPPEKGRKDPWDRENYQRNALNGLLRLAG-IQDDDLIIVSDVDEI-PSPETLKFL 199 (356)
T ss_pred hcceEEEEecCcCCCCCCchhHHHHHHHHHHHHHhhhcC-CCCCCEEEEcCcccc-cCHHHHHHH
Confidence 45778877655432211 223345655555544 378999999999995 889887654
No 95
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=29.49 E-value=88 Score=34.76 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHhhhccc
Q 009443 517 LSSVFFVTFLFFGSIIL 533 (534)
Q Consensus 517 ~s~~~~~~~~~~~~~~~ 533 (534)
.|.+=+++|.|+-+.+|
T Consensus 205 ~SlvDaLLFiHYlavvL 221 (505)
T PF06638_consen 205 VSLVDALLFIHYLAVVL 221 (505)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45666788888877665
No 96
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=28.99 E-value=1.8e+02 Score=26.54 Aligned_cols=44 Identities=14% Similarity=-0.029 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
.+-+.++..|++... .+.|.+++++||+-.-+++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 467888999998832 24789999999993335888988887765
No 97
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate []. The isoprenoid pathway is a well known target for anti-infective drug development [, ].; GO: 0003824 catalytic activity, 0008299 isoprenoid biosynthetic process; PDB: 1VGW_F 1VGZ_A 1W77_A 2YC3_A 2YCM_A 2YC5_A 1VGU_A 3N9W_B 1I52_A 1H3M_B ....
Probab=28.98 E-value=1.8e+02 Score=28.85 Aligned_cols=78 Identities=12% Similarity=0.019 Sum_probs=43.6
Q ss_pred cCcceEEEEECCCCCh-hhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchH
Q 009443 20 NHSTIIEIIQDTSGEN-ETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPT 98 (534)
Q Consensus 20 dh~~~i~vi~~~~~~~-~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~ 98 (534)
.||.+=+|++--+.+. +...+.... ..+.++.-. .......-+||+... .+.++|++-||=-=.-.++
T Consensus 40 ~~~~i~~Ivvv~~~~~~~~~~~~~~~--~~v~iv~GG-------~tR~~SV~ngL~~l~--~~~d~VlIHDaaRPfv~~~ 108 (221)
T PF01128_consen 40 ASPEIDEIVVVVPPEDIDYVEELLSK--KKVKIVEGG-------ATRQESVYNGLKALA--EDCDIVLIHDAARPFVSPE 108 (221)
T ss_dssp TTTTESEEEEEESGGGHHHHHHHHHH--TTEEEEE---------SSHHHHHHHHHHCHH--CTSSEEEEEETTSTT--HH
T ss_pred cCCCCCeEEEEecchhHHHHHHhhcC--CCEEEecCC-------hhHHHHHHHHHHHHH--cCCCEEEEEccccCCCCHH
Confidence 4566666655444333 222222222 666666432 234556677777633 4459999999954222478
Q ss_pred HHHHHHHHhc
Q 009443 99 SARQAMCFHL 108 (534)
Q Consensus 99 ~l~~~~~~f~ 108 (534)
.+.+++....
T Consensus 109 ~i~~~i~~~~ 118 (221)
T PF01128_consen 109 LIDRVIEAAR 118 (221)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887665
No 98
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=28.17 E-value=43 Score=29.57 Aligned_cols=10 Identities=30% Similarity=0.607 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 009443 485 LLSLYILIIN 494 (534)
Q Consensus 485 ~~~~w~~~~l 494 (534)
+.++|.++|.
T Consensus 13 ~~~~Wi~~N~ 22 (108)
T PF06210_consen 13 FLAVWILLNI 22 (108)
T ss_pred HHHHHHHHHh
Confidence 3333444443
No 99
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=27.88 E-value=1.6e+02 Score=29.75 Aligned_cols=42 Identities=10% Similarity=-0.063 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 65 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 65 KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
..+.+-++++... .+.++|++.|+|+=.-.++.+++++....
T Consensus 103 r~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~~ 144 (252)
T PLN02728 103 RQDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDAA 144 (252)
T ss_pred hHHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHHh
Confidence 3556777777632 35689999999774445788877775443
No 100
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=26.79 E-value=1.5e+02 Score=27.95 Aligned_cols=41 Identities=12% Similarity=0.049 Sum_probs=33.0
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 64 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 64 ~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
+-.+++..+++. .+.+++++++||+-.-+++.+++++..+.
T Consensus 75 g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 75 GPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 456788888887 67899999999995556899998887664
No 101
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=26.08 E-value=6.3e+02 Score=24.74 Aligned_cols=58 Identities=17% Similarity=0.282 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC--ch--HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCh
Q 009443 453 MVSLMILNVAALVCGVIRMIAVGN--WD--KLFAQVLLSLYILIINFAIVEGMIVRKDKGRISP 512 (534)
Q Consensus 453 ~~~l~~l~l~alv~g~~~~~~~g~--~~--~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~ 512 (534)
=..|+++.+++++.|+--+++... ++ .+....+..++.++.++-++.-..+ |+++.|.
T Consensus 99 DssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~ 160 (226)
T COG4858 99 DSSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPG 160 (226)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCc
Confidence 345778888999999887775322 12 2344456667777777766655543 7777774
No 102
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
Probab=24.16 E-value=2.4e+02 Score=28.54 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=33.5
Q ss_pred CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHH
Q 009443 46 MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (534)
Q Consensus 46 ~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~ 104 (534)
.+.+.++.- |. ..+.|+++-.++.......+.+.++++-+||++.+.+.+.+++
T Consensus 72 ~~~~~ii~e---p~--~~gTa~ai~~a~~~~~~~~~~~~vlVl~~D~~i~~~~~f~~~l 125 (274)
T cd02509 72 LPEENIILE---PE--GRNTAPAIALAALYLAKRDPDAVLLVLPSDHLIEDVEAFLKAV 125 (274)
T ss_pred CCCceEEEC---CC--CCCcHHHHHHHHHHHHhcCCCCeEEEecchhcccCHHHHHHHH
Confidence 466677653 21 2456888877766532112357999999999876544444444
No 103
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=24.03 E-value=2.8e+02 Score=30.90 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=41.1
Q ss_pred hhhhcCC--cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHH
Q 009443 41 ADLVEMP--LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 104 (534)
Q Consensus 41 ~~~~~~p--~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~ 104 (534)
....++| ++.+++.... .-.++.+|+.+++.. .+.++++.+|-|+.. +++||.+.-
T Consensus 306 ~l~~k~~~~~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f-~~~fL~rcR 363 (499)
T PF05679_consen 306 ELERKYPFSRIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVF-TSDFLNRCR 363 (499)
T ss_pred HHHHhCCccceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCccc-CHHHHHHHH
Confidence 3344555 6788887622 247899999999863 456799999999975 499998743
No 104
>PF13779 DUF4175: Domain of unknown function (DUF4175)
Probab=23.38 E-value=2.3e+02 Score=33.84 Aligned_cols=27 Identities=22% Similarity=0.245 Sum_probs=23.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009443 446 SSVFLVPMVSLMILNVAALVCGVIRMI 472 (534)
Q Consensus 446 ~~~l~~P~~~l~~l~l~alv~g~~~~~ 472 (534)
.|+.++|.++++.+-+.....|++..+
T Consensus 3 ~wp~~~p~~~v~~lflal~~lGl~~~l 29 (820)
T PF13779_consen 3 LWPALWPLLSVLALFLALSWLGLWDLL 29 (820)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 578899999999998888889998776
No 105
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=23.19 E-value=2.3e+02 Score=26.91 Aligned_cols=44 Identities=9% Similarity=-0.063 Sum_probs=33.1
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 64 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 64 ~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
....++..|++.... .+.+.++++|||+=.-+++.+++++..+.
T Consensus 79 ~~~~si~~al~~~~~-~~~~~vlv~~~D~P~i~~~~i~~li~~~~ 122 (218)
T cd02516 79 TRQDSVLNGLKALPD-ADPDIVLIHDAARPFVSPELIDRLIDALK 122 (218)
T ss_pred HHHHHHHHHHHhccc-CCCCEEEEccCcCCCCCHHHHHHHHHHHh
Confidence 357788888887210 25789999999985457899999988774
No 106
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=22.78 E-value=3e+02 Score=24.70 Aligned_cols=54 Identities=19% Similarity=0.125 Sum_probs=39.8
Q ss_pred CChHHHHHHHHHHcCCCC-CCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCCceEEEcCC
Q 009443 63 HFKGGALNVLLRVSGVIS-NSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFP 122 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s-~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~p 122 (534)
.+=..+|-.+++. . +.+.++++-||+...+++.+++++..+.+ .+.+++++.++
T Consensus 70 ~G~~~sl~~a~~~----~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~--~~~~i~~~~~~ 124 (160)
T PF12804_consen 70 QGPLASLLAALSQ----LPSSEPVLVLPCDQPFLSPELLRRLLEALEK--SPADIVVPVFR 124 (160)
T ss_dssp CSHHHHHHHHHHT----STTSSEEEEEETTETTS-HHHHHHHHHHHHH--TTTSEEEEEET
T ss_pred CChHHHHHHHHHh----cccCCCcEEEeCCccccCHHHHHHHHHHHhc--cCCcEEEEEEC
Confidence 5778888888887 4 88999999999954469999999988752 22346666543
No 107
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=22.49 E-value=5.4e+02 Score=24.11 Aligned_cols=41 Identities=20% Similarity=0.118 Sum_probs=29.7
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
.+.++++-.+++. .+.+.+++++||++.+ ++ +.+.+..+..
T Consensus 81 ~G~~~~l~~a~~~----~~~~~~lv~~~D~~~~-~~-~~~~l~~~~~ 121 (223)
T cd06915 81 LGTGGAIKNALPK----LPEDQFLVLNGDTYFD-VD-LLALLAALRA 121 (223)
T ss_pred CcchHHHHHHHhh----cCCCCEEEEECCcccC-CC-HHHHHHHHHh
Confidence 5678888888887 4556788999999753 55 5566666654
No 108
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=21.56 E-value=1.8e+02 Score=30.96 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=29.9
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 105 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~ 105 (534)
+++|+-.|=-++-.+.. ...+||-.+|||.|+| ..+.+-+.
T Consensus 141 R~GKgEGMiiG~lLAk~-~g~~YVGFiDaDNyiP--GaV~EYvk 181 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAKA-IGAEYVGFVDADNYFP--GAVNEYVK 181 (381)
T ss_pred ecCcchHHHHHHHHHHH-hCCceEeEeecccCCC--chHHHHHH
Confidence 57888887766544321 4779999999999975 77766554
No 109
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism]
Probab=21.51 E-value=4e+02 Score=26.71 Aligned_cols=80 Identities=15% Similarity=0.071 Sum_probs=43.9
Q ss_pred ccCcceEEEEECCCCCh-hhhHHhh-hhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCc
Q 009443 19 RNHSTIIEIIQDTSGEN-ETIRQAD-LVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 96 (534)
Q Consensus 19 ~dh~~~i~vi~~~~~~~-~~~~~~~-~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~ 96 (534)
+.||.+-+|++-.+.+. +...+.. ....+++..+.- ....+...-++|..... .+.++|++-||===.-.
T Consensus 43 ~~~~~i~~Ivvv~~~~~~~~~~~~~~~~~~~~v~~v~G-------G~~R~~SV~~gL~~~~~-~~~~~VlvHDaaRPf~~ 114 (230)
T COG1211 43 LESPAIDEIVVVVSPEDDPYFEKLPKLSADKRVEVVKG-------GATRQESVYNGLQALSK-YDSDWVLVHDAARPFLT 114 (230)
T ss_pred HhCcCCCeEEEEEChhhhHHHHHhhhhccCCeEEEecC-------CccHHHHHHHHHHHhhc-cCCCEEEEeccccCCCC
Confidence 45666556666544422 2111111 223345555532 12456667777777421 26899999999432334
Q ss_pred hHHHHHHHHH
Q 009443 97 PTSARQAMCF 106 (534)
Q Consensus 97 p~~l~~~~~~ 106 (534)
++.+.+.+..
T Consensus 115 ~~~i~~li~~ 124 (230)
T COG1211 115 PKLIKRLIEL 124 (230)
T ss_pred HHHHHHHHHh
Confidence 7888888833
No 110
>PLN03153 hypothetical protein; Provisional
Probab=21.20 E-value=1.7e+02 Score=32.84 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=23.7
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 009443 80 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 111 (534)
Q Consensus 80 s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~ 111 (534)
.+.+..+++|.|++++ ++-|.+.+.-+ ||+
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dpt 238 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DPS 238 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CCC
Confidence 7889999999999976 77777766655 554
No 111
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=20.81 E-value=1.1e+02 Score=32.74 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f 107 (534)
+++|+-.|=-++-.+.. ...+||-.+|||.|+| .++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk~-~g~~YVGFiDADNyiP--GaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAKA-LGARYVGFVDADNYIP--GAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHHH-hCCCeEeEeecccCCC--chHHHHHHHH
Confidence 57888887766544321 4779999999999975 7776655433
No 112
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=20.47 E-value=4.9e+02 Score=24.33 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=30.4
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
.+-++++-.++.. -+.+.+++++||++ .+.++ .+.+.++.+
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~-~~~~~-~~~~~~~~~ 121 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVL-TDLDL-SELLRFHRE 121 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCee-cCcCH-HHHHHHHHh
Confidence 4678999999887 36678999999996 44664 556666654
No 113
>PF07457 DUF1516: Protein of unknown function (DUF1516); InterPro: IPR010899 This family contains a number of hypothetical bacterial proteins of unknown function approximately 120 residues long.
Probab=20.25 E-value=6e+02 Score=22.40 Aligned_cols=57 Identities=23% Similarity=0.361 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCChhHHHHHHHHH
Q 009443 461 VAALVCGVIRMIA--VGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFF 522 (534)
Q Consensus 461 l~alv~g~~~~~~--~g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~~~~P~~~~~~s~~~~ 522 (534)
++.++-|++-+.. .+...-.....+...| .+.+.|-.+.||.|++ |.....|..+.+
T Consensus 44 lliiisG~~L~~~~~~~~~~l~~iK~l~gl~----vI~lmEm~l~rkkk~k-~~~~~~~~~ii~ 102 (110)
T PF07457_consen 44 LLIIISGVWLFIRTFAGNPMLYIIKMLLGLI----VIGLMEMALARKKKGK-PTKILWWLFIIL 102 (110)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHH----HHHHHHHHHHHHHcCC-CccHHHHHHHHH
Confidence 3344444444442 2333334555666655 5678888899988887 766666644433
Done!