Query 009443
Match_columns 534
No_of_seqs 270 out of 1722
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 05:18:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009443.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009443hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 7.3E-41 2.5E-45 383.2 33.8 353 47-507 212-576 (802)
2 2z86_A Chondroitin synthase; G 99.3 1.7E-11 5.7E-16 135.8 14.7 174 24-280 125-336 (625)
3 3bcv_A Putative glycosyltransf 99.2 2.6E-11 8.9E-16 116.7 10.6 81 18-109 29-111 (240)
4 1xhb_A Polypeptide N-acetylgal 99.2 6.4E-11 2.2E-15 126.8 12.6 219 18-318 54-320 (472)
5 1qg8_A Protein (spore coat pol 99.2 8.9E-12 3E-16 121.3 4.4 187 17-291 24-234 (255)
6 2d7i_A Polypeptide N-acetylgal 99.1 6E-11 2E-15 130.8 7.5 207 18-304 137-378 (570)
7 2z86_A Chondroitin synthase; G 99.1 1.2E-10 4E-15 129.0 7.0 192 17-296 398-597 (625)
8 2ffu_A Ppgalnact-2, polypeptid 99.0 4E-10 1.4E-14 121.8 8.7 80 18-109 91-173 (501)
9 3ckj_A Putative uncharacterize 98.8 7.1E-09 2.4E-13 106.1 8.1 54 62-123 116-170 (329)
10 4fix_A UDP-galactofuranosyl tr 98.6 1.1E-07 3.8E-12 106.5 12.3 78 24-108 214-294 (657)
11 3l7i_A Teichoic acid biosynthe 98.6 7.5E-09 2.6E-13 117.1 0.0 86 15-110 23-111 (729)
12 2fy7_A Beta-1,4-galactosyltran 98.4 2.3E-07 7.9E-12 93.7 5.5 63 235-297 187-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 98.0 8.4E-06 2.9E-10 85.7 8.3 51 63-121 165-216 (387)
14 2nxv_A ATP synthase subunits r 97.8 2.8E-05 9.4E-10 76.1 7.1 42 63-109 60-101 (249)
15 2bo4_A Mannosylglycerate synth 97.0 0.0031 1.1E-07 66.3 11.6 42 63-108 74-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 88.4 0.72 2.5E-05 48.2 6.9 38 62-105 142-182 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 84.1 3.3 0.00011 42.8 8.9 33 62-95 141-173 (391)
18 3lw6_A FI08434P, beta-4-galact 57.8 29 0.001 34.4 8.1 53 245-297 185-250 (287)
19 1fo8_A Alpha-1,3-mannosyl-glyc 57.5 17 0.00057 37.1 6.6 45 67-120 89-137 (343)
20 3q80_A 2-C-methyl-D-erythritol 49.8 29 0.00099 32.9 6.6 45 65-109 83-127 (231)
21 2j0a_A Beta-1,3-N-acetylglucos 33.1 39 0.0013 33.1 4.7 30 80-111 92-121 (280)
22 3d5n_A Q97W15_sulso; NESG, SSR 30.1 1E+02 0.0035 27.8 6.8 41 64-107 72-112 (197)
23 1vgw_A 4-diphosphocytidyl-2C-m 28.7 1.8E+02 0.0061 26.4 8.3 47 63-109 82-131 (231)
24 2waw_A MOBA relate protein; un 26.2 1.3E+02 0.0045 26.4 6.7 42 63-106 79-120 (199)
25 1i52_A 4-diphosphocytidyl-2-C- 25.3 3E+02 0.01 25.1 9.2 43 64-109 84-126 (236)
26 2c0n_A A197; thermophil protei 25.3 50 0.0017 31.0 3.6 24 80-104 52-78 (203)
27 2y6p_A 3-deoxy-manno-octuloson 23.8 87 0.003 28.6 5.1 41 63-109 72-113 (234)
28 3juk_A UDP-glucose pyrophospho 23.6 1.1E+02 0.0037 29.1 5.9 52 48-109 96-151 (281)
29 1ezi_A CMP-N-acetylneuraminic 23.4 1.8E+02 0.0062 26.4 7.3 44 64-109 81-124 (228)
30 2wee_A MOBA-related protein; u 23.1 1.4E+02 0.0046 26.3 6.1 42 63-106 79-120 (197)
31 2e8b_A Probable molybdopterin- 21.8 1.5E+02 0.0052 26.6 6.3 38 63-104 82-120 (201)
32 2xwl_A 2-C-methyl-D-erythritol 21.3 1.4E+02 0.0048 26.9 6.0 41 64-107 78-118 (223)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=7.3e-41 Score=383.22 Aligned_cols=353 Identities=20% Similarity=0.320 Sum_probs=280.0
Q ss_pred CcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCccc
Q 009443 47 PLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKF 125 (534)
Q Consensus 47 p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f 125 (534)
.++.|+.|+++ +++|+||+|.+++. ++||||+++|||++ ++|+++++++.+|. ||+ +++||+|+.+
T Consensus 212 ~~v~~i~~~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp~----v~~V~~~~~~ 278 (802)
T 4hg6_A 212 LGVVYSTRERN----EHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDPD----LFLVQTPHFF 278 (802)
T ss_dssp HTCEEEECSSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSSS----CCEEECCCCB
T ss_pred cCcEEEEecCC----CCcchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHHhcCCC----eEEEeccEEE
Confidence 47889999876 57999999999999 89999999999997 56999999999994 665 8999999999
Q ss_pred cCCCccchHH----------HHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHh
Q 009443 126 HNFNEHDIYD----------GSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIK 195 (534)
Q Consensus 126 ~n~~~~d~~~----------~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~ 195 (534)
.|.+ +.. ++...++...+.+.+.+++++++|+++++||+++
T Consensus 279 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al-------------------------- 329 (802)
T 4hg6_A 279 INPD---PIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL-------------------------- 329 (802)
T ss_dssp SSCC---HHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH--------------------------
T ss_pred eCCc---hHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH--------------------------
Confidence 8853 322 2345678889999999999999999999999999
Q ss_pred hhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCCcccchHHHHHHHHhCCCEEEEeCCCCCceeec
Q 009443 196 SLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGT 274 (534)
Q Consensus 196 s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~ 274 (534)
+++ ||++++++||.+++.+++++||++.|+++ +.+.+.
T Consensus 330 ---------------------------------------~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~ 368 (802)
T 4hg6_A 330 ---------------------------------------DEAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGL 368 (802)
T ss_dssp ---------------------------------------HHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEEC
T ss_pred ---------------------------------------HHcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEec
Confidence 456 69999999999999999999999999997 688999
Q ss_pred cCCCHHHHHHhhhhcccccchhhhhhcCCcccCCcccchhHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccc
Q 009443 275 STTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEV 354 (534)
Q Consensus 275 aP~~l~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~Y~~~~~~~~~~~~~~l~y~~~P~~~ll~g~~~~~~~ 354 (534)
+|+++.++++||.||++|.+|+++ +++|++ .+++++.||++|+....++ +.+++.++++++|+++++++..+++..
T Consensus 369 ~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~--~~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~ 444 (802)
T 4hg6_A 369 QPETFASFIQQRGRWATGMMQMLL-LKNPLF--RRGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVAT 444 (802)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH-HSCTTS--CSSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCC
T ss_pred CCCCHHHHHHHHHHHHccHHHHHH-HhCccc--cCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 999999999999999999999998 567877 4789999999999988888 888899999999999999999988765
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHcCcccceeeccCCcchhhhh
Q 009443 355 SSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVK 434 (534)
Q Consensus 355 ~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~~~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~ 434 (534)
...++.++++.++.. .++.....+.....||+.. +.. ...++.+...+..++++++.+|+||+|+...+..
T Consensus 445 ~~~~~~~~lp~~l~~---~~~~~~~~~~~r~~~~~~l----~~~-~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~- 515 (802)
T 4hg6_A 445 FEEVLAYMPGYLAVS---FLVQNALFARQRWPLVSEV----YEV-AQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN- 515 (802)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHTTTSCTTHHHH----HHH-HHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC-
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHhcCcHHHHHHHH----HHH-HHHHHHHHHHHHHHhCCCCCcceECCCCcccccc-
Confidence 444444444433221 1111122333334566553 222 2444556666677788899999999999865431
Q ss_pred hhcccceeecccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 009443 435 RYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 507 (534)
Q Consensus 435 ~y~~~~f~f~~~~~l~~P~~~l~~l~l~alv~g~~~~~~~g~~~~~~~~l~~~~w~~~~l~p~~~al~~r~~~ 507 (534)
. .+.+..|++++++++++++++|++++.... ......+++++|.++|++.+.-++....++
T Consensus 516 -----~-----~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~ 576 (802)
T 4hg6_A 516 -----Y-----ISPIYRPLLFTFLLCLSGVLATLVRWVAFP--GDRSVLLVVGGWAVLNVLLVGFALRAVAEK 576 (802)
T ss_dssp -----C-----BCTTCHHHHHHHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHHHHHHHHHHHHHHTTTBCC
T ss_pred -----c-----hhhHHHHHHHHHHHHHHHHHHHHHHHhccC--CccchhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence 1 125678999999999999999999987432 234556778888888888887777664443
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.29 E-value=1.7e-11 Score=135.83 Aligned_cols=174 Identities=20% Similarity=0.197 Sum_probs=111.6
Q ss_pred eEEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHH
Q 009443 24 IIEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 102 (534)
Q Consensus 24 ~i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~ 102 (534)
.|-|+.|++.|+. .+... -...+++.|+.++++ .++|++|+|.|++. ++||||+++|+|++ ++|++|.+
T Consensus 125 eiivvDd~s~d~t~~~~~~-~~~~~~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~-~~~~~l~~ 194 (625)
T 2z86_A 125 EVIVADDGSKENIEEIVRE-FESLLNIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMA-PNPLWVQS 194 (625)
T ss_dssp EEEEEEESCSSCHHHHHHT-TTTTSCEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEE-ECTTHHHH
T ss_pred EEEEEeCCCchhHHHHHHH-hhhcCCeEEEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCC-CCHHHHHH
Confidence 3434445555432 11222 223478999987644 35799999999999 89999999999997 56999999
Q ss_pred HHHHhc-CCCCCCceEEEcCCccccCCCccchHHHHH--HHhh----------------------hhh---Hhhhh----
Q 009443 103 AMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYDGSL--RSGY----------------------RLQ---WPGMD---- 150 (534)
Q Consensus 103 ~~~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~--~~f~----------------------~~~---~~g~d---- 150 (534)
++..|. +|. +++|+..+.+.+.. ..+.... ..+. +.. ....+
T Consensus 195 ~~~~~~~~~~----~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (625)
T 2z86_A 195 YMELLAVDDN----VALIGPRKYIDTSK--HTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRL 268 (625)
T ss_dssp HHHHHHHCTT----EEEECCEEEECCTT--CCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTT
T ss_pred HHHHHhcCCc----eEEEEeeeeccCcc--cchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccc
Confidence 999986 444 78777665554322 1111000 0000 000 00001
Q ss_pred -hcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccc
Q 009443 151 -GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEH 229 (534)
Q Consensus 151 -~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~ 229 (534)
.....+++|+++++||+++
T Consensus 269 ~~~~~~~~~g~~~~~rr~~l------------------------------------------------------------ 288 (625)
T 2z86_A 269 CNTPFRFFSGGNVAFAKKWL------------------------------------------------------------ 288 (625)
T ss_dssp CSCGGGGCCTTEEEEETHHH------------------------------------------------------------
T ss_pred cCCceeEEeeceeeeEHHHH------------------------------------------------------------
Confidence 1112347899999999999
Q ss_pred ccccccccc-cCCCcc---cchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHH
Q 009443 230 QTKWGEEVG-FSYQSV---SEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLN 280 (534)
Q Consensus 230 ~t~wg~~vG-~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~ 280 (534)
+++| |++... .||.++++|++.+||++.|+++ +...-..|.+-.
T Consensus 289 -----~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~--~~v~H~~~~~~~ 336 (625)
T 2z86_A 289 -----FRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEG--AMAYHQEPPGKE 336 (625)
T ss_dssp -----HHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGG--GCEEEECCC---
T ss_pred -----HHhCCCccccccCCcchhhhhhhHHhCCceEEEccc--chhhccCCcccc
Confidence 4564 877654 5999999999999999999987 345555555543
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.23 E-value=2.6e-11 Score=116.71 Aligned_cols=81 Identities=25% Similarity=0.219 Sum_probs=59.9
Q ss_pred cccCcce-EEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 009443 18 SRNHSTI-IEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 95 (534)
Q Consensus 18 ~~dh~~~-i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~ 95 (534)
.|+++.. |-|+.|++.|+. .++.......|++.+++. ++ .++++|.|.|++. ++||||+++|+|.+ .
T Consensus 29 ~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~-~n-----~G~~~a~N~g~~~----a~g~~i~~lD~Dd~-~ 97 (240)
T 3bcv_A 29 AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHK-KN-----AGLGMACNSGLDV----ATGEYVAFCDSDDY-V 97 (240)
T ss_dssp TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEEC-CC-----CCHHHHHHHHHHH----CCSSEEEECCTTCC-C
T ss_pred hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEEC-CC-----CChHHHHHHHHHH----cCCCEEEEECCCCc-C
Confidence 4566643 323445555542 244445556899999963 23 5899999999999 89999999999997 5
Q ss_pred chHHHHHHHHHhcC
Q 009443 96 DPTSARQAMCFHLD 109 (534)
Q Consensus 96 ~p~~l~~~~~~f~d 109 (534)
+|++|++++..+.+
T Consensus 98 ~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 98 DSDMYMTMYNVAQK 111 (240)
T ss_dssp CTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 69999999999875
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.20 E-value=6.4e-11 Score=126.80 Aligned_cols=219 Identities=15% Similarity=0.103 Sum_probs=133.3
Q ss_pred cccCcc---eEEEEECCCCChh--hhHHhhhhcCC-cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 18 SRNHST---IIEIIQDTSGENE--TIRQADLVEMP-LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 18 ~~dh~~---~i~vi~~~~~~~~--~~~~~~~~~~p-~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
.++++. .|-|+.|++.|++ .+.+......| +++++..++| .++++|+|.+++. +.||||+++|+|
T Consensus 54 ~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~D 124 (472)
T 1xhb_A 54 NRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAH 124 (472)
T ss_dssp HSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESS
T ss_pred hcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECCC
Confidence 455555 3445555665532 23344456788 8999988766 4799999999999 899999999999
Q ss_pred CCCCchHHHHHHHHHhc-CCCCCCceEEEcCCcc-ccCCCcc------chHHHH--HHHhhhh------hH--hh---hh
Q 009443 92 MYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQK-FHNFNEH------DIYDGS--LRSGYRL------QW--PG---MD 150 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~-f~n~~~~------d~~~~~--~~~f~~~------~~--~g---~d 150 (534)
.. .+|++|++++..+. +|+ ++.+ |.. ..+.+.. ...... ....+.. .. +. ..
T Consensus 125 ~~-~~p~~L~~ll~~~~~~~~----~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
T 1xhb_A 125 CE-CTAGWLEPLLARIKHDRR----TVVC--PIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTL 197 (472)
T ss_dssp EE-ECTTCHHHHHHHHHHCTT----EEEE--EEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTS
T ss_pred eE-eCccHHHHHHHHHHhCCC----EEEE--eeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCC
Confidence 97 56999999999886 333 3333 211 1111000 000000 0000000 00 00 01
Q ss_pred hcCCcccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccc
Q 009443 151 GLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQ 230 (534)
Q Consensus 151 ~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~ 230 (534)
....+...|++.++||+++
T Consensus 198 ~~~~~~~~g~~~~irr~~~------------------------------------------------------------- 216 (472)
T 1xhb_A 198 PVRTPTMAGGLFSIDRDYF------------------------------------------------------------- 216 (472)
T ss_dssp CEECSBCCSSSEEEEHHHH-------------------------------------------------------------
T ss_pred cccCccccceeEEEEHHHH-------------------------------------------------------------
Confidence 2234556788888999998
Q ss_pred cccccccc-cCCCcc---cchHHHHHHHHhCCCEEEEeCCCCCc--eeeccCC----C-----HHHHHHhhhhcccccch
Q 009443 231 TKWGEEVG-FSYQSV---SEDFFTGFILHCKGWTSTYLDPSRPQ--FLGTSTT----N-----LNDVLIQGTRWASGLID 295 (534)
Q Consensus 231 t~wg~~vG-~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~~--~~g~aP~----~-----l~~~l~Qr~RWa~G~~q 295 (534)
+++| |+++.. .||++.++|+...|++..|++..+.. .....|. . ....+++..||..+..+
T Consensus 217 ----~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~ 292 (472)
T 1xhb_A 217 ----QEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKN 292 (472)
T ss_dssp ----HHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGH
T ss_pred ----HHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 5664 877654 79999999999999999998863210 0112222 2 45677888899999999
Q ss_pred hhhhhcCCcccC------CcccchhHHHH
Q 009443 296 VSISRFCPLLYG------PSRMSLLLSMC 318 (534)
Q Consensus 296 i~~~~~~p~~~~------~~~l~~~qrl~ 318 (534)
.++ ..+|.... ..++.+++|+.
T Consensus 293 ~~~-~~~p~~~~~~~g~~~~~~~lr~~l~ 320 (472)
T 1xhb_A 293 FFY-IISPGVTKVDYGDISSRLGLRRKLQ 320 (472)
T ss_dssp HHH-HTSTTGGGSCCCCCHHHHHHHHHTT
T ss_pred HHH-hhCcccccCCCCCHHHHHHHHHhcC
Confidence 887 44554311 12455666654
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.18 E-value=8.9e-12 Score=121.30 Aligned_cols=187 Identities=16% Similarity=0.056 Sum_probs=109.8
Q ss_pred CcccCcce-EEEEECCCCChh-hhHHhhhhcCCcEEEEEcc--------CCCCCCCCChHHHHHHHHHHcCCCCCCCEEE
Q 009443 17 NSRNHSTI-IEIIQDTSGENE-TIRQADLVEMPLLVYVSRE--------KSPEHLHHFKGGALNVLLRVSGVISNSPYIL 86 (534)
Q Consensus 17 ~~~dh~~~-i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Re--------k~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il 86 (534)
..|+++.. |-|+.|++.|+. .++.... ..|++.|+..+ ++ .++++|+|.+++. ++||||+
T Consensus 24 ~~q~~~~~eiivvDd~S~d~t~~~~~~~~-~~~~i~~i~~~~~~~~~~~~n-----~G~~~a~N~gi~~----a~g~~i~ 93 (255)
T 1qg8_A 24 LSQTFSDFELFIMDDNSNEETLNVIRPFL-NDNRVRFYQSDISGVKERTEK-----TRYAALINQAIEM----AEGEYIT 93 (255)
T ss_dssp HTCSCCCEEEEEEECSCCHHHHHHHGGGG-GSTTEEEEECCCCSHHHHHSS-----CHHHHHHHHHHHH----CCCSEEE
T ss_pred HhccCCceEEEEEECCCCchHHHHHHHHh-hcCCEEEEecccccccccccc-----cCHHHHHHHHHHH----cCCCEEE
Confidence 35667653 323334444432 1222222 27899999886 33 5899999999999 8999999
Q ss_pred EeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcCCcccc--CCCccchHHHHHHHhhhhhHhhhhhcCCcccccceee
Q 009443 87 GLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFH--NFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHY 163 (534)
Q Consensus 87 ~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~--n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~ 163 (534)
++|+|.++ +|++|.+++..+. +|+ +++|.+..... +.+.. +... ++... ............|++++
T Consensus 94 ~lD~Dd~~-~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~-~~~~----~~~~~-~~~~~~~~~~~~~~~~~ 162 (255)
T 1qg8_A 94 YATDDNIY-MPDRLLKMVRELDTHPE----KAVIYSASKTYHLNENRD-IVKE----TVRPA-AQVTWNAPCAIDHCSVM 162 (255)
T ss_dssp EEETTEEE-CTTHHHHHHHHHHHCTT----CCEEEEEEEEEEEC---C-EEEE----EEECC-CSCBSCCTTTSCGGGEE
T ss_pred EeCCCCcc-ChHHHHHHHHHHHhCCC----ceEEEeceEEEEeCCCCc-chhh----ccCch-HHHHHhhcCCCccceEE
Confidence 99999975 5999999999886 444 67777665544 22111 0000 00000 00111233456889999
Q ss_pred eeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhccccccccccccccccccc--c--
Q 009443 164 IRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVG--F-- 239 (534)
Q Consensus 164 ~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~vG--~-- 239 (534)
+||+++ +++| |
T Consensus 163 ~rr~~~-----------------------------------------------------------------~~~g~~f~~ 177 (255)
T 1qg8_A 163 HRYSVL-----------------------------------------------------------------EKVKEKFGS 177 (255)
T ss_dssp EETHHH-----------------------------------------------------------------HHHHHHHSS
T ss_pred EEHHHH-----------------------------------------------------------------Hhhcccccc
Confidence 999998 2332 4
Q ss_pred ----C-CCcccchHHHHHHHHhCCCEEEEeCCCCCceeeccCCCHHHHH--Hhhhhccc
Q 009443 240 ----S-YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL--IQGTRWAS 291 (534)
Q Consensus 240 ----~-~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~l--~Qr~RWa~ 291 (534)
. .....||.+..+++...| +..|+++. ...+-..|.+..... .|+.+|.+
T Consensus 178 ~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~-~~~~r~~~~s~s~~~~~~~~~~~~~ 234 (255)
T 1qg8_A 178 YWDESPAFYRIGDARFFWRVNHFY-PFYPLDEE-LDLNYITDQSIHFQLFELEKNEFVR 234 (255)
T ss_dssp SSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEE-EEEEEEC--------------CTGG
T ss_pred cccCCcccchHHHHHHHHHHHHhC-CEEEecCc-EEEEEEcCCccchhHHHHHHHHHHH
Confidence 1 124689999999999987 68888873 334455667666655 44444543
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.11 E-value=6e-11 Score=130.78 Aligned_cols=207 Identities=14% Similarity=0.073 Sum_probs=128.0
Q ss_pred cccCcc---eEEEEECCCCChh--hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 009443 18 SRNHST---IIEIIQDTSGENE--TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDM 92 (534)
Q Consensus 18 ~~dh~~---~i~vi~~~~~~~~--~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~ 92 (534)
.++++. .|-|+.|++.|+. .+.+......|+++++..+++ .++++|.|.+++. ++||||+++|+|.
T Consensus 137 ~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~ 207 (570)
T 2d7i_A 137 NRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHC 207 (570)
T ss_dssp HHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSE
T ss_pred hcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-----CCHHHHHHHHHHh----cCCCEEEEEcCCc
Confidence 345555 3435555565543 233344456799999988765 5799999999999 8999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCCceEEEcCCccccCCCc-------cchHHH--HHHHhhhhhHhh--------hhhcCCc
Q 009443 93 YCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNE-------HDIYDG--SLRSGYRLQWPG--------MDGLKGP 155 (534)
Q Consensus 93 ~~~~p~~l~~~~~~f~dp~~~~~v~~VQ~pq~f~n~~~-------~d~~~~--~~~~f~~~~~~g--------~d~~~~~ 155 (534)
.+ +|++|++++..+.+.. .+ .|.....+.+.+. ...... ....++...... ......+
T Consensus 208 ~~-~p~~L~~ll~~l~~~~---~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (570)
T 2d7i_A 208 EA-NVNWLPPLLDRIARNR---KT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESP 282 (570)
T ss_dssp EE-CTTCSHHHHHHHHHCT---TE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECS
T ss_pred cc-cccHHHHHHHHHHhCC---CE-EEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecc
Confidence 75 6999999999886422 23 2321111111100 000000 000011110000 1112345
Q ss_pred ccccceeeeeccccCCCccccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccc
Q 009443 156 FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGE 235 (534)
Q Consensus 156 ~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~ 235 (534)
...|++.++||+++ +
T Consensus 283 ~~~g~~~~irr~~~-----------------------------------------------------------------~ 297 (570)
T 2d7i_A 283 VMAGGLFAVDRKWF-----------------------------------------------------------------W 297 (570)
T ss_dssp SCCSSSEEEEHHHH-----------------------------------------------------------------H
T ss_pred cccceEEEEEHHHH-----------------------------------------------------------------H
Confidence 56788999999998 5
Q ss_pred cc-ccCCCcc---cchHHHHHHHHhCCCEEEEeCCCCCc--eeeccCC-------CHHHHHHhhhhcccccchhhhhhcC
Q 009443 236 EV-GFSYQSV---SEDFFTGFILHCKGWTSTYLDPSRPQ--FLGTSTT-------NLNDVLIQGTRWASGLIDVSISRFC 302 (534)
Q Consensus 236 ~v-G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~~--~~g~aP~-------~l~~~l~Qr~RWa~G~~qi~~~~~~ 302 (534)
++ ||+++.. .||++.++|+...||+++|+|..+.. ..+..|. ......+...||.....+.+..+ +
T Consensus 298 ~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~ 376 (570)
T 2d7i_A 298 ELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-R 376 (570)
T ss_dssp HTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-C
T ss_pred hcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 66 4776554 69999999999999999998763211 1122331 14567777889999988887743 4
Q ss_pred Cc
Q 009443 303 PL 304 (534)
Q Consensus 303 p~ 304 (534)
|.
T Consensus 377 p~ 378 (570)
T 2d7i_A 377 PE 378 (570)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.06 E-value=1.2e-10 Score=129.01 Aligned_cols=192 Identities=18% Similarity=0.195 Sum_probs=122.4
Q ss_pred CcccCcce-EEEEECCCCChh-hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCC
Q 009443 17 NSRNHSTI-IEIIQDTSGENE-TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 94 (534)
Q Consensus 17 ~~~dh~~~-i~vi~~~~~~~~-~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~ 94 (534)
..|++++. |-|+.|++.|+. .++.......|++.+++ +++ .++++|+|.+++. ++||||+++|+|.+
T Consensus 398 ~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n-----~G~~~a~n~g~~~----a~g~~i~~ld~D~~- 466 (625)
T 2z86_A 398 LNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKN-----KGIGSASNTAVRL----CRGFYIGQLDSDDF- 466 (625)
T ss_dssp HSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECC-----CCHHHHHHHHHHH----CCSSEEEECCTTCE-
T ss_pred HhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCC-----CCHHHHHHHHHHh----cCCCEEEEECCCcc-
Confidence 35666653 334445555542 23333445678999996 433 5899999999999 89999999999997
Q ss_pred CchHHHHHHHHHhc-CCCCCCceEEEcCCccccCCCccchHHHHHHHhhhhhHhhhhhcCCcccccceeeeeccccCCCc
Q 009443 95 NDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNF 173 (534)
Q Consensus 95 ~~p~~l~~~~~~f~-dp~~~~~v~~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 173 (534)
.+|++|++++..|. +|+ +++|.+...+.+.+.. .... .+.......+.+...+++|+++++||+++
T Consensus 467 ~~~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~---- 533 (625)
T 2z86_A 467 LEPDAVELCLDEFRKDLS----LACVYTTNRNIDREGN-LISN----GYNWPIYSREKLTSAMICHHFRMFTARAW---- 533 (625)
T ss_dssp ECTTHHHHHHHHHHHCTT----CSEEEEEEEEECTTSC-EEEE----CCCCSSCCHHHHTTSCCCCSCEEEEHHHH----
T ss_pred cChhHHHHHHHHHHhCCC----eeEEEeeeEEECCCCC-Eecc----CcccccCCHHHHhhcccCCceEEEEHHHH----
Confidence 46999999998884 554 7777776555443211 0000 00000001122334567889999999988
Q ss_pred cccCcchHhhhhhhcCchhHHhhhhhhccccccCCccchhhHHhhhcccccccccccccccccc-ccCCC-cccchHHHH
Q 009443 174 KHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEV-GFSYQ-SVSEDFFTG 251 (534)
Q Consensus 174 ~~~~~d~~~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~a~~v~~c~ye~~t~wg~~v-G~~~~-svtED~~t~ 251 (534)
+++ ||+.. ...||.+..
T Consensus 534 -------------------------------------------------------------~~~ggfd~~~~~~eD~dl~ 552 (625)
T 2z86_A 534 -------------------------------------------------------------NLTEGFNESISNAVDYDMY 552 (625)
T ss_dssp -------------------------------------------------------------TTTTCCCSSCSSCHHHHHH
T ss_pred -------------------------------------------------------------HHhCCCCCccCChHHHHHH
Confidence 456 47764 357999999
Q ss_pred HHHHhCCCEEEEeCCCCCcee---eccCCCHHHHHHhhhhcccccchh
Q 009443 252 FILHCKGWTSTYLDPSRPQFL---GTSTTNLNDVLIQGTRWASGLIDV 296 (534)
Q Consensus 252 ~~l~~~Gwrs~y~~~~~~~~~---g~aP~~l~~~l~Qr~RWa~G~~qi 296 (534)
+|+...| +..|+++. ... .....+......|+.+|....-+.
T Consensus 553 ~r~~~~g-~~~~~~~~--~~~~r~h~~~~s~~~~~~~~~~~~~~~~~~ 597 (625)
T 2z86_A 553 LKLSEVG-PFKHINKI--CYNRVLHGENTSIKKLDIQKENHFKVVNES 597 (625)
T ss_dssp HHHTTTS-CEEEEEEE--EEEEECC----CCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CEEEeCCc--EEEEEECCCccchhhHHHHHHHHHHHHHHH
Confidence 9999999 88898873 332 233445555667776665544333
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.01 E-value=4e-10 Score=121.81 Aligned_cols=80 Identities=10% Similarity=0.005 Sum_probs=60.0
Q ss_pred cccCcc---eEEEEECCCCChhhhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCC
Q 009443 18 SRNHST---IIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC 94 (534)
Q Consensus 18 ~~dh~~---~i~vi~~~~~~~~~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~ 94 (534)
.+.++. .|-|+.|++.|+ +.. ......|+++++..++| .++++|+|.+++. ++||||+++|+|..+
T Consensus 91 ~q~~~~~~~EIIvVDDgS~D~-t~~-~~~~~~~~v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~ 159 (501)
T 2ffu_A 91 KKSPPHLIKEIILVDDYSNDP-EDG-ALLGKIEKVRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCEC 159 (501)
T ss_dssp HHSCGGGEEEEEEEECSCSCT-HHH-HGGGGBTTEEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEE
T ss_pred hhCchhhceeEEEEECCCCch-HHH-HHHhcCCCEEEEECCCC-----cCHHHHHHHHHHh----cCCCEEEEECCCccc
Confidence 344554 343444555554 222 22346789999988766 5799999999999 899999999999975
Q ss_pred CchHHHHHHHHHhcC
Q 009443 95 NDPTSARQAMCFHLD 109 (534)
Q Consensus 95 ~~p~~l~~~~~~f~d 109 (534)
+|++|.+++..+.+
T Consensus 160 -~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 160 -NEHWLEPLLERVAE 173 (501)
T ss_dssp -CTTCHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHh
Confidence 59999999998864
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.79 E-value=7.1e-09 Score=106.11 Aligned_cols=54 Identities=19% Similarity=0.051 Sum_probs=44.2
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCCceEEEcCCc
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQ 123 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f-~dp~~~~~v~~VQ~pq 123 (534)
..+|++|+|.+++. ++||||+++|+|.+..+|++|.+++..+ .+|+ +++|++..
T Consensus 116 n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~----~~~v~g~~ 170 (329)
T 3ckj_A 116 RPGKGEALWRSLAA----SRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDG----VHLVKSFY 170 (329)
T ss_dssp CCSHHHHHHHHHHH----CCCSEEEECCTTEESCCTTHHHHHHHHHHSCSS----CCEEEEEE
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCCcChHHHHHHHHHHHhCCC----ccEEEEEe
Confidence 36899999999999 8999999999999624599999999885 4554 67776643
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.64 E-value=1.1e-07 Score=106.46 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=54.3
Q ss_pred eEEEEECCCCChh---hhHHhhhhcCCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHH
Q 009443 24 IIEIIQDTSGENE---TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 100 (534)
Q Consensus 24 ~i~vi~~~~~~~~---~~~~~~~~~~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l 100 (534)
.|-|+.+++.|.+ ...+......|++.++..+ | .+.|+|.|.+++.+.-..++|||+.+|+|.+ ++|++|
T Consensus 214 EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~-N-----~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~-~~pd~L 286 (657)
T 4fix_A 214 AVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP-N-----LGGSGGYSRVMYEALKNTDCQQILFMDDDIR-LEPDSI 286 (657)
T ss_dssp EEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC-C-----CHHHHHHHHHHHHHHHHCCCSEEEEECSSEE-ECTHHH
T ss_pred EEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC-C-----CCHHHHHHHHHHHHHhcCCCCEEEEECCCCc-cChhHH
Confidence 4445555555421 1222333345799999765 4 5789999999998421126799999999997 559999
Q ss_pred HHHHHHhc
Q 009443 101 RQAMCFHL 108 (534)
Q Consensus 101 ~~~~~~f~ 108 (534)
.+++.++.
T Consensus 287 ~~ll~~l~ 294 (657)
T 4fix_A 287 LRVLAMHR 294 (657)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999886
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.56 E-value=7.5e-09 Score=117.06 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=0.0
Q ss_pred CCCcccCcceEE-EEECCCCChh-hhHHhhhhc-CCcEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCC
Q 009443 15 YGNSRNHSTIIE-IIQDTSGENE-TIRQADLVE-MPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 91 (534)
Q Consensus 15 ~~~~~dh~~~i~-vi~~~~~~~~-~~~~~~~~~-~p~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD 91 (534)
+...|+++..-- |+.|++.|+. .++.....+ -++++++..+++ .++++|.|.|++. ++||||+.+|+|
T Consensus 23 Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n-----~G~~~arN~gi~~----A~gdyI~flD~D 93 (729)
T 3l7i_A 23 SIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDEN-----SGHAHARNIALEE----VETPYFMFLDAD 93 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCC-----CCHHHHHHHHHHh----ccCCEEEEECCC
Confidence 455677774322 3334444432 223333333 358999987665 5799999999999 899999999999
Q ss_pred CCCCchHHHHHHHHHhcCC
Q 009443 92 MYCNDPTSARQAMCFHLDP 110 (534)
Q Consensus 92 ~~~~~p~~l~~~~~~f~dp 110 (534)
.++ .|++|++++..+.++
T Consensus 94 d~~-~p~~l~~l~~~l~~~ 111 (729)
T 3l7i_A 94 DEL-ASYAITFYLEKFNNT 111 (729)
T ss_dssp -------------------
T ss_pred CCC-ChhHHHHHHHHhcCC
Confidence 975 699999999988743
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.38 E-value=2.3e-07 Score=93.72 Aligned_cols=63 Identities=11% Similarity=-0.013 Sum_probs=45.7
Q ss_pred ccc-ccCCCcc---cchHHHHHHHHhCCCEEEEeCCCCCce----------eeccCCCHHHHHHhhhhcccccchhh
Q 009443 235 EEV-GFSYQSV---SEDFFTGFILHCKGWTSTYLDPSRPQF----------LGTSTTNLNDVLIQGTRWASGLIDVS 297 (534)
Q Consensus 235 ~~v-G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~~~----------~g~aP~~l~~~l~Qr~RWa~G~~qi~ 297 (534)
+++ ||+..-. .||.+.+.|++.+||+..+.++..... ....|+.+....+|+.||+.+.++.+
T Consensus 187 ~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 187 LTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp HHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred HHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 456 4776543 599999999999999877433211111 23478999999999999999998876
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.02 E-value=8.4e-06 Score=85.65 Aligned_cols=51 Identities=29% Similarity=0.284 Sum_probs=42.3
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCCceEEEcC
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQF 121 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~-dp~~~~~v~~VQ~ 121 (534)
.+|++|+|.+++. ++||||+.+|||....+|++|.+++..+. +|+ +++|..
T Consensus 165 ~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~----~d~v~G 216 (387)
T 3f1y_A 165 HGKGDAMWRALSV----TRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPG----VRFVKA 216 (387)
T ss_dssp CSHHHHHHHHTTT----CCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTT----CCEEEE
T ss_pred CCHHHHHHHHHHh----cCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCC----ceEEEE
Confidence 6899999999998 89999999999996246999999998885 454 555544
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=97.80 E-value=2.8e-05 Score=76.14 Aligned_cols=42 Identities=7% Similarity=-0.102 Sum_probs=37.4
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
.+.|.|+|.|++. ++|||++++|+|.++ +|++|.+++.++.+
T Consensus 60 ~g~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 60 FHGFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEA 101 (249)
T ss_dssp CCTTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHh
Confidence 4678999999999 899999999999976 69999999988863
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=97.04 E-value=0.0031 Score=66.34 Aligned_cols=42 Identities=21% Similarity=0.067 Sum_probs=36.2
Q ss_pred CChHHHHHHHH----HHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 009443 63 HFKGGALNVLL----RVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 108 (534)
Q Consensus 63 ~~KAGaLN~~l----~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~ 108 (534)
.+|++|++.++ +. ++||+|+++|||..-.+|+.+.+++....
T Consensus 74 ~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEE----TQWERIHFYDADITSFGPDWITKAEEAAD 119 (397)
T ss_dssp SSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 59999999999 77 89999999999995235999999887764
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=88.38 E-value=0.72 Score=48.19 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=31.9
Q ss_pred CCChHHHHHHHHHHcCCCC---CCCEEEEeCCCCCCCchHHHHHHHH
Q 009443 62 HHFKGGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMC 105 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s---~g~~Il~lDaD~~~~~p~~l~~~~~ 105 (534)
+++|..||-.++.. + +||+|+.+|||-+ .|..+.+.+.
T Consensus 142 r~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~--iP~~v~~~~k 182 (394)
T 2zu9_A 142 RSGKGEGMLVGLLL----AKAIGAEYVGFVDADNY--IPGAVNEYVK 182 (394)
T ss_dssp CCSHHHHHHHHHHH----HHHTTCSEEEECCSCBS--CHHHHHHHHH
T ss_pred cCChHHHHHHHHHH----HhhCCCCEEEEEeCCCC--CHHHHHHHHH
Confidence 46999999999998 6 8999999999995 3787766543
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=84.09 E-value=3.3 Score=42.80 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.2
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 009443 62 HHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 95 (534)
Q Consensus 62 ~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~ 95 (534)
+.+|++++-.++..+.. ..++||..+|||.++|
T Consensus 141 R~GKGegmi~Gi~~Ak~-~~geYVgFvDADdyi~ 173 (391)
T 2wvl_A 141 RSGKAEGMILALVFAAL-SGRRYVGFIDADNYFP 173 (391)
T ss_dssp CCSHHHHHHHHHHHHHH-TTCSEEEECCSCBSCH
T ss_pred cccchHHHHHHHHHHHh-cCCCEEEEEcCcCCCc
Confidence 57999999999988211 2899999999999975
No 18
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=57.82 E-value=29 Score=34.43 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=36.6
Q ss_pred cchHHHHHHHHhCCCEEEEeCCC---C-Ccee---------eccCCCHHHHHHhhhhcccccchhh
Q 009443 245 SEDFFTGFILHCKGWTSTYLDPS---R-PQFL---------GTSTTNLNDVLIQGTRWASGLIDVS 297 (534)
Q Consensus 245 tED~~t~~~l~~~Gwrs~y~~~~---~-~~~~---------g~aP~~l~~~l~Qr~RWa~G~~qi~ 297 (534)
-||.+...|+...|.++...+.. + ..+. ...|......-.+++||..+.+.-+
T Consensus 185 gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 185 LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 79999999999999987543320 0 0111 1234556667889999998888776
No 19
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=57.48 E-value=17 Score=37.08 Aligned_cols=45 Identities=22% Similarity=0.187 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHH---HHHHHHhc-CCCCCCceEEEc
Q 009443 67 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA---RQAMCFHL-DPKTSSSLAFVQ 120 (534)
Q Consensus 67 GaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l---~~~~~~f~-dp~~~~~v~~VQ 120 (534)
.++|.+... .++|+++++|-|++ +.|+|+ .+++..+. ||. +..|.
T Consensus 89 ~al~~vf~~----~~~~~vIiLEDDl~-~spdF~~y~~~~l~~y~~D~~----I~~IS 137 (343)
T 1fo8_A 89 WALGQIFHN----FNYPAAVVVEDDLE-VAPDFFEYFQATYPLLKADPS----LWCVS 137 (343)
T ss_dssp HHHHHHHTT----SCCSEEEEEETTEE-ECTTHHHHHHHHHHHHHHCTT----EEEEE
T ss_pred HHHHHHHHh----ccCCEEEEEcCCCe-ECHHHHHHHHHHHHHhhcCCc----EEEEe
Confidence 366666655 58999999999996 669998 45555554 443 76664
No 20
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=49.82 E-value=29 Score=32.89 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 65 KGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 65 KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
....+-++|+......+.++|+++|||+=.-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356677788763210125899999999855568999999887764
No 21
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=33.10 E-value=39 Score=33.07 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=24.0
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 009443 80 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 111 (534)
Q Consensus 80 s~g~~Il~lDaD~~~~~p~~l~~~~~~f~dp~ 111 (534)
.+.++++..|.|++++ .+-|.+.+..+ ||+
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC-CCC
Confidence 5889999999999976 88887777554 554
No 22
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=30.15 E-value=1e+02 Score=27.77 Aligned_cols=41 Identities=15% Similarity=-0.017 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 009443 64 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (534)
Q Consensus 64 ~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f 107 (534)
+-++++..+++.. .+.+.+++++||+-.-+++.+++++..+
T Consensus 72 G~~~si~~al~~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF---KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT---TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh---ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 5678888888873 2348999999999333588998888766
No 23
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=28.73 E-value=1.8e+02 Score=26.38 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHHcCC---CCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 63 HFKGGALNVLLRVSGV---ISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~---~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
.+.++++-.+++.... ..+.+.+++++||+-.-+++.+++++..+.+
T Consensus 82 ~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~ 131 (231)
T 1vgw_A 82 QTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGN 131 (231)
T ss_dssp SSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhh
Confidence 3578888888876310 0156899999999854568899999887753
No 24
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=26.22 E-value=1.3e+02 Score=26.45 Aligned_cols=42 Identities=10% Similarity=-0.111 Sum_probs=31.7
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~ 106 (534)
.+-++++..+++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 79 LGCSSSLKSALTWVD--PTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TTCCCHHHHHHHTSC--TTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhhh--ccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 355778888988731 256899999999954458888888766
No 25
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=25.34 E-value=3e+02 Score=25.06 Aligned_cols=43 Identities=9% Similarity=0.176 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 64 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 64 ~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
+..+++-.+++.. .+.+.+++++||+-.-+++.+++++..+.+
T Consensus 84 g~~~~i~~al~~~---~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~ 126 (236)
T 1i52_A 84 ERADSVLAGLKAA---GDAQWVLVHDAARPCLHQDDLARLLALSET 126 (236)
T ss_dssp SHHHHHHHHHHTS---TTCSEEEECCTTCTTCCHHHHHHHHGGGGT
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCccccCCHHHHHHHHHHHHh
Confidence 5778888888872 246899999999954568899998877753
No 26
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=25.27 E-value=50 Score=31.05 Aligned_cols=24 Identities=17% Similarity=0.055 Sum_probs=20.9
Q ss_pred CCCCEEEEeCCC---CCCCchHHHHHHH
Q 009443 80 SNSPYILGLDCD---MYCNDPTSARQAM 104 (534)
Q Consensus 80 s~g~~Il~lDaD---~~~~~p~~l~~~~ 104 (534)
+++++++.+||| . -.+|+.+.+.+
T Consensus 52 ~~~dhllfIDAD~~~I-~FdPe~V~rLl 78 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPI-EIDFQKVEAKF 78 (203)
T ss_dssp TTCCEEEEECTTEEEE-ECCHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcc-ccCHHHHHHHH
Confidence 788999999999 7 46799998877
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=23.79 E-value=87 Score=28.65 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=31.0
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhcC
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 109 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~-~~~~p~~l~~~~~~f~d 109 (534)
.+.++.++ +++. .+.|.+++++||+ .+ +++.+++++..+.+
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFV-YEEDIKLIFRELEK 113 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCC-CHHHHHHHHHHHHH
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcC-CHHHHHHHHHHHHh
Confidence 56777774 5555 4678999999999 54 48889999887753
No 28
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=23.63 E-value=1.1e+02 Score=29.14 Aligned_cols=52 Identities=12% Similarity=-0.027 Sum_probs=37.3
Q ss_pred cEEEEEccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchH----HHHHHHHHhcC
Q 009443 48 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPT----SARQAMCFHLD 109 (534)
Q Consensus 48 ~l~Yv~Rek~p~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~----~l~~~~~~f~d 109 (534)
.+.|+..+ . ..+-++++-.++.. .+.+.++++.||++ -+++ .+++++.++.+
T Consensus 96 ~i~~~~~~-~----~~Gt~~al~~a~~~----l~~~~~lv~~~D~~-~~~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 96 CFSYVRQK-Q----MKGLGHAILTGEAL----IGNEPFAVILADDL-CISHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp EEEEEECS-S----CCCHHHHHHHTHHH----HCSSCEEEECTTEE-EECTTSCCHHHHHHHHHHH
T ss_pred cEEEEecC-C----CCCcHHHHHHHHHH----cCCCCEEEEeCCee-ccCccchHHHHHHHHHHHH
Confidence 45565432 2 24778999999887 33467888999995 4577 78999888754
No 29
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=23.42 E-value=1.8e+02 Score=26.44 Aligned_cols=44 Identities=18% Similarity=0.048 Sum_probs=33.0
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 009443 64 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 109 (534)
Q Consensus 64 ~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f~d 109 (534)
+.+.++-++++..+ .+.|.++++|||+-.-+++.+++++..+.+
T Consensus 81 g~~~sv~~~l~~~~--~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 81 SSISGVIHALETIG--SNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp HHHHHHHHHHHHHT--CCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred ChHHHHHHHHHHhC--CCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 45777888888742 346899999999844458889998877654
No 30
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=23.07 E-value=1.4e+02 Score=26.33 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=31.1
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 106 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~ 106 (534)
.+-++++-.+++... .+.+.+++++||+-.-+++.+++++..
T Consensus 79 ~g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 79 RGCAASLRVALARVH--PRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp -CCHHHHHHHHTTSC--TTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhc--ccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 356888888887621 256899999999943458888888766
No 31
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=21.78 E-value=1.5e+02 Score=26.63 Aligned_cols=38 Identities=11% Similarity=-0.044 Sum_probs=30.7
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHH-HH
Q 009443 63 HFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ-AM 104 (534)
Q Consensus 63 ~~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~-~~ 104 (534)
.+-++++-.+++. .+.+.+++++||+-.-+++.+++ ++
T Consensus 82 ~g~~~~i~~al~~----~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 82 SASIIGLYTALKH----AKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCHHHHHHHHHHH----CSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHH----cCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5788999999988 55789999999994336888887 66
No 32
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=21.33 E-value=1.4e+02 Score=26.90 Aligned_cols=41 Identities=10% Similarity=0.155 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 009443 64 FKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 107 (534)
Q Consensus 64 ~KAGaLN~~l~~s~~~s~g~~Il~lDaD~~~~~p~~l~~~~~~f 107 (534)
..++++..+++.. .+.+++++++||+-.-+++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 3678888888772 2678999999999433588899988877
Done!