BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009451
(534 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 336 PGSDFVNSP--QDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPDGRE 393
P F + P +DP F+ EL A+D F+++N+LG GGFG VYKG L DG
Sbjct: 5 PQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL 64
Query: 394 VAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYF 452
VA+K+LK QG E +F+ EVE+IS HR+L+ L G+C++ RLL+Y Y+ N ++
Sbjct: 65 VAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
Query: 453 HLHG--EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVS 510
L E +P LDW R +IA G+ARGLAYLH+ C P+IIHRD+K++NILLD FEA V
Sbjct: 125 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 184
Query: 511 DFGLAKLALDANTHITTRVMGTFG 534
DFGLAKL + H+ V GT G
Sbjct: 185 DFGLAKLMDYKDXHVXXAVRGTIG 208
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 126/197 (63%), Gaps = 3/197 (1%)
Query: 341 VNSPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPDGREVAIKQLK 400
V + +DP F+ EL A+D F ++N+LG GGFG VYKG L DG VA+K+LK
Sbjct: 4 VPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK 63
Query: 401 IGGGQG-EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG--E 457
QG E +F+ EVE+IS HR+L+ L G+C++ RLL+Y Y+ N ++ L E
Sbjct: 64 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 123
Query: 458 GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
+P LDW R +IA G+ARGLAYLH+ C P+IIHRD+K++NILLD FEA V DFGLAKL
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 518 ALDANTHITTRVMGTFG 534
+ H+ V G G
Sbjct: 184 MDYKDXHVXXAVRGXIG 200
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 117/188 (62%), Gaps = 16/188 (8%)
Query: 357 FTYEELVKATDGFADQ------NLLGEGGFGSVYKGYLPDGREVAIKQL----KIGGGQG 406
F++ EL T+ F ++ N +GEGGFG VYKGY+ + VA+K+L I +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 407 EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWA 465
+++F E++++++ H +LV L+G+ D L+Y Y+PN +L L +G P L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 466 TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD-ANTH 524
R KIA GAA G+ +LHE+ H IHRDIKS+NILLD F A++SDFGLA+ + A T
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 525 ITTRVMGT 532
+ +R++GT
Sbjct: 191 MXSRIVGT 198
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 361 ELVKATDGFADQNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRI 420
+L +AT+ F + L+G G FG VYKG L DG +VA+K+ QG EF+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV--LDWATRVKIAAGAARGL 478
H HLVSL+G+C + +LIY Y+ N L HL+G P + W R++I GAARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN-THITTRVMGTFG 534
YLH IIHRD+KS NILLD NF +++DFG++K + + TH+ V GT G
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Query: 361 ELVKATDGFADQNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRI 420
+L +AT+ F + L+G G FG VYKG L DG +VA+K+ QG EF+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV--LDWATRVKIAAGAARGL 478
H HLVSL+G+C + +LIY Y+ N L HL+G P + W R++I GAARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD-ANTHITTRVMGTFG 534
YLH IIHRD+KS NILLD NF +++DFG++K + TH+ V GT G
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 116/188 (61%), Gaps = 16/188 (8%)
Query: 357 FTYEELVKATDGFADQ------NLLGEGGFGSVYKGYLPDGREVAIKQL----KIGGGQG 406
F++ EL T+ F ++ N +GEGGFG VYKGY+ + VA+K+L I +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 407 EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWA 465
+++F E++++++ H +LV L+G+ D L+Y Y+PN +L L +G P L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 466 TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD-ANTH 524
R KIA GAA G+ +LHE+ H IHRDIKS+NILLD F A++SDFGLA+ + A T
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 525 ITTRVMGT 532
+ R++GT
Sbjct: 191 MXXRIVGT 198
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 16/188 (8%)
Query: 357 FTYEELVKATDGFADQ------NLLGEGGFGSVYKGYLPDGREVAIKQL----KIGGGQG 406
F++ EL T+ F ++ N +GEGGFG VYKGY+ + VA+K+L I +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 407 EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWA 465
+++F E++++++ H +LV L+G+ D L+Y Y+PN +L L +G P L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 466 TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD-ANTH 524
R KIA GAA G+ +LHE+ H IHRDIKS+NILLD F A++SDFGLA+ + A
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 525 ITTRVMGT 532
+ R++GT
Sbjct: 185 MXXRIVGT 192
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 112/188 (59%), Gaps = 16/188 (8%)
Query: 357 FTYEELVKATDGFADQ------NLLGEGGFGSVYKGYLPDGREVAIKQL----KIGGGQG 406
F++ EL T+ F ++ N GEGGFG VYKGY+ + VA+K+L I +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 407 EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWA 465
+++F E+++ ++ H +LV L+G+ D L+Y Y PN +L L +G P L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 466 TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD-ANTH 524
R KIA GAA G+ +LHE+ H IHRDIKS+NILLD F A++SDFGLA+ + A
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 525 ITTRVMGT 532
+R++GT
Sbjct: 182 XXSRIVGT 189
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGER--EFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+V++ G +VA+K L ER EF EV I+ R+ H ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ +Y+ +LY LH G R LD R+ +A A+G+ YLH + +P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD+KS N+L+D + +V DFGL++L
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 90/157 (57%), Gaps = 7/157 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGER--EFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+V++ G +VA+K L ER EF EV I+ R+ H ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ +Y+ +LY LH G R LD R+ +A A+G+ YLH + +P I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
R++KS N+L+D + +V DFGL++L A+T ++++
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSK 197
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 100/175 (57%), Gaps = 21/175 (12%)
Query: 372 QNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGE-------REFKAEVEIISRIHHR 423
+ +G+GGFG V+KG L D VAIK L +G +GE +EF+ EV I+S ++H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++V L G + R ++ ++VP LY L + P+ W+ ++++ A G+ Y+ +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIALGIEYM-Q 139
Query: 484 DCHPRIIHRDIKSSNILLDNNFE-----AQVSDFGLAKLALDANTHITTRVMGTF 533
+ +P I+HRD++S NI L + E A+V+DFGL++ + H + ++G F
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNF 190
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 99/175 (56%), Gaps = 21/175 (12%)
Query: 372 QNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGE-------REFKAEVEIISRIHHR 423
+ +G+GGFG V+KG L D VAIK L +G +GE +EF+ EV I+S ++H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++V L G + R ++ ++VP LY L + P+ W+ ++++ A G+ Y+ +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIALGIEYM-Q 139
Query: 484 DCHPRIIHRDIKSSNILLDNNFE-----AQVSDFGLAKLALDANTHITTRVMGTF 533
+ +P I+HRD++S NI L + E A+V+DF L++ + H + ++G F
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNF 190
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 99/175 (56%), Gaps = 21/175 (12%)
Query: 372 QNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGE-------REFKAEVEIISRIHHR 423
+ +G+GGFG V+KG L D VAIK L +G +GE +EF+ EV I+S ++H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++V L G + R ++ ++VP LY L + P+ W+ ++++ A G+ Y+ +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIALGIEYM-Q 139
Query: 484 DCHPRIIHRDIKSSNILLDNNFE-----AQVSDFGLAKLALDANTHITTRVMGTF 533
+ +P I+HRD++S NI L + E A+V+DFG ++ + H + ++G F
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNF 190
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 25/186 (13%)
Query: 343 SPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIK 397
P P G +++ ++K T+ +LG G FG+VYKG ++P+G V AIK
Sbjct: 18 EPLTPSGTAPNQAQL---RILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK 73
Query: 398 QL-KIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHL 454
L + G + EF E I++ + H HLV L+G C+S +L + +P+ L Y H
Sbjct: 74 ILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHE 132
Query: 455 HGE---GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
H + + +L+W ++ A+G+ YL E R++HRD+ + N+L+ + +++D
Sbjct: 133 HKDNIGSQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITD 183
Query: 512 FGLAKL 517
FGLA+L
Sbjct: 184 FGLARL 189
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G G FG V+ GY + +VAIK +K G E +F E E++ ++ H LV L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
L+++++ + L +L + R + T + + G+AYL E C +IHRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+ N +VSDFG+ + LD
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLD 175
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G G FG V+ GY + +VAIK ++ G E +F E E++ ++ H LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
L+++++ + L +L + R + T + + G+AYL E C +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+ N +VSDFG+ + LD
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD 155
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G G FG V+ GY + +VAIK ++ G E +F E E++ ++ H LV L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
L+++++ + L +L + R + T + + G+AYL E C +IHRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+ N +VSDFG+ + LD
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLD 158
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G G FG V+ GY + +VAIK ++ G E +F E E++ ++ H LV L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
L+++++ + L +L + R + T + + G+AYL E C +IHRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+ N +VSDFG+ + LD
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLD 153
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 21/156 (13%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREV----AIKQL-KIGGGQGEREFKAEVEIISRIHHRHLV 426
+LG G FG+VYKG ++P+G V AIK L + G + EF E I++ + H HLV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 427 SLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEG---RPVLDWATRVKIAAGAARGLAYL 481
L+G C+S +L + +P+ L Y H H + + +L+W ++ A+G+ YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
E R++HRD+ + N+L+ + +++DFGLA+L
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G G FG V+ GY + +VAIK ++ G E +F E E++ ++ H LV L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
L+ +++ + L +L + R + T + + G+AYL E C +IHRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+ N +VSDFG+ + LD
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLD 156
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ +I H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 73
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 130
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 131 RAANILVGENLVCKVADFGLARLIED 156
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G G FG V+ GY + +VAIK ++ G E +F E E++ ++ H LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
L+++++ + L +L + R + T + + G+AYL E +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+ N +VSDFG+ + LD
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD 155
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 76
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 133
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 134 RAANILVGENLVCKVADFGLARLIED 159
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 307 RAANILVGENLVCKVADFGLARLIED 332
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 389
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 390 RAANILVGENLVCKVADFGLARLIED 415
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 307 RAANILVGENLVCKVADFGLARLIED 332
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 72
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 129
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 130 RAANILVGENLVCKVADFGLARLIED 155
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 74
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 131
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 132 RAANILVGENLVCKVADFGLARLIED 157
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED 166
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ G +VAIK LK G E F E +I+ ++ H LV L +S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYA-VVS 74
Query: 435 DDRRLLIYDYVPNNTLY-FHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
++ ++ +Y+ +L F GEGR L V +AA A G+AY+ + IHRD
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNY---IHRD 130
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLALD 520
++S+NIL+ N +++DFGLA+L D
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIED 157
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 306
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 307 RAANILVGENLVCKVADFGLARLIED 332
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
++NIL+ N +V+DFGLA+L D
Sbjct: 141 AAANILVGENLVCKVADFGLARLIED 166
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V ++A A G+AY+ + +HRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 138 RAANILVGENLVCKVADFGLARLIED 163
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V ++A A G+AY+ + +HRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGLA+L D
Sbjct: 138 RAANILVGENLVCKVADFGLARLIED 163
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG+G FG V+ G VAIK LK G E F E +++ ++ H LV L +S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
++ ++ +Y+ +L L GE L V +AA A G+AY+ + +HRD+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 307
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ N +V+DFGL +L D
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIED 333
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 87
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 144
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIED 170
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA ARG+ YLH IIHR
Sbjct: 78 -TKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 493 DIKSSNILLDNNFEAQVSDFGLAKL 517
D+KS+NI L + ++ DFGLA +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA ARG+ YLH IIHR
Sbjct: 90 -TKPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 493 DIKSSNILLDNNFEAQVSDFGLA 515
D+KS+NI L + ++ DFGLA
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 80
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 137
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIED 163
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 88
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 145
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIED 171
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 141
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIED 167
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 73
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 130
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIED 156
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 141
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIED 167
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIED 161
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA ARG+ YLH IIHR
Sbjct: 90 TAP-QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 493 DIKSSNILLDNNFEAQVSDFGLA 515
D+KS+NI L + ++ DFGLA
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 79
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 136
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIED 162
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 83
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 140
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIED 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 86
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 143
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIED 169
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIED 161
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIED 161
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 373 NLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
+LG+G FG K + G + +K+L + +R F EV+++ + H +++ +G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
D R I +Y+ TL + W+ RV A A G+AYLH IIH
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
RD+ S N L+ N V+DFGLA+L +D T
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 27/173 (15%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGG----GQGEREFKAEVEIISRIHHRHLVS 427
+ ++G GGFG VY+ + G EVA+K + Q + E ++ + + H ++++
Sbjct: 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP---VLDWATRVKIAAGAARGLAYLHED 484
L G C+ + L+ ++ L L G+ P +++WA ++ ARG+ YLH++
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDE 124
Query: 485 CHPRIIHRDIKSSNILLDNNFE--------AQVSDFGLAKLALDANTHITTRV 529
IIHRD+KSSNIL+ E +++DFGLA+ H TT++
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKM 172
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGER--EFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K LK+ E+ F+ EV ++ + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY- 100
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
++ D ++ + ++LY HLH + + IA A+G+ YLH IIHR
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHR 156
Query: 493 DIKSSNILLDNNFEAQVSDFGLAKL 517
D+KS+NI L ++ DFGLA +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATV 181
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
D L+G G +G+VYKG L D R VA+K Q F E I R+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIY-RVPLMEHD 67
Query: 427 SLVGYCISDDR--------RLLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAAR 476
++ + + D+R LL+ +Y PN +L Y LH DW + ++A R
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTR 122
Query: 477 GLAYLHEDC------HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
GLAYLH + P I HRD+ S N+L+ N+ +SDFGL+
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 74
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHR++
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRNL 131
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+++NIL+ + +++DFGLA+L D
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIED 157
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLGTK- 136
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G G V+ GY +VA+K LK G F AE ++ ++ H+ LV L ++
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+ +I +Y+ N +L L L + +AA A G+A++ E + IHRD+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALDAN 522
+++NIL+ + +++DFGLA+L DA
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 98/182 (53%), Gaps = 25/182 (13%)
Query: 347 PGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKI 401
P G ++++ ++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+
Sbjct: 3 PSGEAPNQALL---RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 58
Query: 402 GGG-QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE- 457
+ +E E +++ + + H+ L+G C++ +L I +P L Y H +
Sbjct: 59 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDN 117
Query: 458 --GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ +L+W ++ A+G+ YL + R++HRD+ + N+L+ +++DFGLA
Sbjct: 118 IGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 168
Query: 516 KL 517
KL
Sbjct: 169 KL 170
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 164
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 165 --RYIHRDLATRNILVENENRVKIGDFGLTKV 194
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 128 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 137
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 138 --RYIHRDLATRNILVENENRVKIGDFGLTKV 167
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 131
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 132 --RYIHRDLATRNILVENENRVKIGDFGLTKV 161
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 151
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 132
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 133 --RYIHRDLATRNILVENENRVKIGDFGLTKV 162
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 133
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 140
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 141 --RYIHRDLATRNILVENENRVKIGDFGLTKV 170
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 133
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 151
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 138
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 139 --RYIHRDLATRNILVENENRVKIGDFGLTKV 168
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT-- 135
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 136 -KRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 133
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 139
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 140 --RYIHRDLATRNILVENENRVKIGDFGLTKV 169
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 128 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 136
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 137 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 132
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 133 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 120
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 121 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 25/186 (13%)
Query: 343 SPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIK 397
P P G ++++ ++K T+ F +LG G FG+VYKG ++P+G +V AI
Sbjct: 29 EPLTPSGEAPNQALL---RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIM 84
Query: 398 QLKIGGG-QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHL 454
+L+ + +E E +++ + + H+ L+G C++ +L I +P L Y
Sbjct: 85 ELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE 143
Query: 455 HGE---GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
H + + +L+W ++ A+G+ YL + R++HRD+ + N+L+ +++D
Sbjct: 144 HKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 194
Query: 512 FGLAKL 517
FGLAKL
Sbjct: 195 FGLAKL 200
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 151
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 152 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VA+K +K G E EF E + + ++ H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 435 DDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ ++ +Y+ N L Y HG+G L+ + +++ G+A+L + IHR
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 493 DIKSSNILLDNNFEAQVSDFGLAKLALD 520
D+ + N L+D + +VSDFG+ + LD
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLD 156
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V+ D VA+K LK ++F E E+++ + H H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 429 VGYCISDDRRLLIYDYVPNNTL--YFHLHG-------EGRP--VLDWATRVKIAAGAARG 477
G C+ D +++++Y+ + L + HG EG P L + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ YL +HRD+ + N L+ N ++ DFG+++
Sbjct: 141 MVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + ++ + ++LY HLH E + + + IA A+G+ YLH IIH
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD+KS+NI L + ++ DFGLA +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + ++ + ++LY HLH E + + + IA A+G+ YLH IIH
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD+KS+NI L + ++ DFGLA +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + ++ + ++LY HLH E + + + IA A+G+ YLH IIH
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD+KS+NI L + ++ DFGLA +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + ++ + ++LY HLH E + + + IA A+G+ YLH IIH
Sbjct: 76 -TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD+KS+NI L + ++ DFGLA +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + ++ + ++LY HLH E + + + IA A+G+ YLH IIH
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RD+KS+NI L + ++ DFGLA
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 123
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 124 ----AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + ++ + ++LY HLH E + + + IA A+G+ YLH IIH
Sbjct: 74 TAP-QLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD+KS+NI L + ++ DFGLA +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 15/186 (8%)
Query: 351 GHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQG 406
G ++++ + + + AT+ D+ ++G G FG V G LP +E VAIK LK+G +
Sbjct: 18 GSTQTVHEFAKELDATNISIDK-VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 76
Query: 407 ER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLD 463
+R +F E I+ + H +++ L G +++ +Y+ N +L + H V+
Sbjct: 77 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 136
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDAN 522
V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 137 ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 523 THITTR 528
TTR
Sbjct: 191 AAYTTR 196
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA A+G+ YLH IIHR
Sbjct: 94 -TKPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 148
Query: 493 DIKSSNILLDNNFEAQVSDFGLA 515
D+KS+NI L + ++ DFGLA
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA A+G+ YLH IIHR
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 493 DIKSSNILLDNNFEAQVSDFGLA 515
D+KS+NI L + ++ DFGLA
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA A+G+ YLH IIHR
Sbjct: 101 -TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 155
Query: 493 DIKSSNILLDNNFEAQVSDFGLA 515
D+KS+NI L + ++ DFGLA
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGG--QGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG+VYKG +VA+K L + Q + FK EV ++ + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
+ + ++ + ++LY HLH + + IA A+G+ YLH IIHR
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 493 DIKSSNILLDNNFEAQVSDFGLA 515
D+KS+NI L + ++ DFGLA
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 15/186 (8%)
Query: 351 GHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQG 406
G ++++ + + + AT+ D+ ++G G FG V G LP +E VAIK LK+G +
Sbjct: 1 GSTQTVHEFAKELDATNISIDK-VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 59
Query: 407 ER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLD 463
+R +F E I+ + H +++ L G +++ +Y+ N +L + H V+
Sbjct: 60 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 119
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDAN 522
V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 120 ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 523 THITTR 528
TTR
Sbjct: 174 AAYTTR 179
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +++P +L Y H E +D ++ + +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 136
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHRD+ + NIL++N ++ DFGL K+
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVG 430
+ ++G G FG V K ++VAIKQ++ + ER+ F E+ +SR++H ++V L G
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
C+ + L+ +Y +LY LHG E P A + ++G+AYLH +
Sbjct: 70 ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 490 IHRDIKSSNILL-DNNFEAQVSDFGLAKLALDANTHITT 527
IHRD+K N+LL ++ DFG A D TH+T
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTN 163
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +L G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 372 QNLLGEGGFGSVYKGYLP-DG--REVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
Q+++GEG FG V K + DG + AIK++K + + R+F E+E++ ++ HH +++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLY--------------FHLHGEGRPVLDWATRVKIAA 472
+L+G C L +Y P+ L F + L + AA
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + + IHRD+ + NIL+ N+ A+++DFGL++
Sbjct: 150 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 375 LGEGGFGSV-YKGYLPD----GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P G VA+K LK G G R ++ E+EI+ ++H H+V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 429 VGYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C + L+ +YVP +L +L R + A + A G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 131
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
IHR + + N+LLDN+ ++ DFGLAK + + + R G
Sbjct: 132 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 375 LGEGGFGSVYKG-YLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+K+L+ + R+F+ E+EI+ + H ++V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 430 GYCISDDRR--LLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
G C S RR LI +Y+P +L Y H E +D ++ + +G+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK- 134
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
R IHR++ + NIL++N ++ DFGL K+
Sbjct: 135 --RYIHRNLATRNILVENENRVKIGDFGLTKV 164
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 375 LGEGGFGSV-YKGYLPD----GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P G VA+K LK G G R ++ E+EI+ ++H H+V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 429 VGYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C + L+ +YVP +L +L R + A + A G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 130
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
IHR + + N+LLDN+ ++ DFGLAK + + + R G
Sbjct: 131 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 372 QNLLGEGGFGSVYKGYLP-DG--REVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
Q+++GEG FG V K + DG + AIK++K + + R+F E+E++ ++ HH +++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLY--------------FHLHGEGRPVLDWATRVKIAA 472
+L+G C L +Y P+ L F + L + AA
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + + IHRD+ + NIL+ N+ A+++DFGL++
Sbjct: 140 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVG 430
+ ++G G FG V K ++VAIKQ++ + ER+ F E+ +SR++H ++V L G
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
C+ + L+ +Y +LY LHG E P A + ++G+AYLH +
Sbjct: 69 ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 490 IHRDIKSSNILL-DNNFEAQVSDFGLAKLALDANTHITT 527
IHRD+K N+LL ++ DFG A D TH+T
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTN 162
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +L G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +L G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFGLAKL
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 375 LGEGGFGSV-YKGYLPD----GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P G VA+K LK G R +K E++I+ ++H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 429 VGYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C + L+ +YVP +L +L R + A + A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-- 136
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
IHR++ + N+LLDN+ ++ DFGLAK + + + R G
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 358 TYEELVKATDG--FADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQGER-EF 410
T E K D + ++G G FG V G LP +E VAIK LK+G + +R +F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV 468
E I+ + H +++ L G +++ +Y+ N +L + H V+ V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LV 150
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
+ G A G+ YL + + +HRD+ + NIL+++N +VSDFGLA+ L D TT
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 528 R 528
R
Sbjct: 208 R 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 358 TYEELVKATDGFADQ---------NLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGG 404
TYE+ + FA + ++G G FG V G LP +E VAIK LK+G
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 405 QGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPV 461
+ +R +F E I+ + H +++ L G +++ +Y+ N +L + H V
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALD 520
+ V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 145 IQ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 521 ANTHITTR 528
TTR
Sbjct: 199 PEAAYTTR 206
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 358 TYEELVKATDGFADQ---------NLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGG 404
TYE+ + FA + ++G G FG V G LP +E VAIK LK+G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 405 QGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPV 461
+ +R +F E I+ + H +++ L G +++ +Y+ N +L + H V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALD 520
+ V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 147 IQ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 521 ANTHITTR 528
TTR
Sbjct: 201 PEAAYTTR 208
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFG AKL
Sbjct: 131 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 358 TYEELVKATDGFADQ---------NLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGG 404
TYE+ + FA + ++G G FG V G LP +E VAIK LK+G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 405 QGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPV 461
+ +R +F E I+ + H +++ L G +++ +Y+ N +L + H V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALD 520
+ V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 147 IQ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 521 ANTHITTR 528
TTR
Sbjct: 201 PEAAYTTR 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 375 LGEGGFGSV-YKGYLPD----GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P G VA+K LK G R +K E++I+ ++H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 429 VGYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C + L+ +YVP +L +L R + A + A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 136
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
IHR++ + N+LLDN+ ++ DFGLAK + + + R G
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFG AKL
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFG AKL
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFG AKL
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFG AKL
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 22/167 (13%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVE 415
++K T+ F +LG G FG+VYKG ++P+G +V AIK+L+ + +E E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 416 IISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGE---GRPVLDWATRVKI 470
+++ + + H+ L+G C++ +L I +P L Y H + + +L+W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
A+G+ YL + R++HRD+ + N+L+ +++DFG AKL
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 357 FTYEELVKATDGFADQ---------NLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIGG 403
FT+E+ +A FA + ++G G FG V G+L P RE VAIK LK G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 404 GQGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL-YFHLHGEGRPV 461
+ +R +F +E I+ + H +++ L G ++I +++ N +L F +G+
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDA 521
+ V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ D
Sbjct: 134 V--IQLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 522 NTHIT 526
+ T
Sbjct: 189 TSDPT 193
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 375 LGEGGFGSV-YKGYLPD----GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P G VA+K LK G R +K E++I+ ++H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 429 VGYC--ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C L+ +YVP +L +L R + A + A G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 153
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
IHRD+ + N+LLDN+ ++ DFGLAK
Sbjct: 154 -HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY + +VA+K LK G + F E ++ + H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 435 DDRRLLIYDYVPNNTLY-FHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
++ +I +Y+ +L F EG VL + +A A G+AY+ + IHRD
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---IHRD 135
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLALD 520
++++N+L+ + +++DFGLA++ D
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIED 162
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 375 LGEGGFGSV-YKGYLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+KQL+ G +R+F+ E++I+ +H +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 430 GYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
G R+ L+ +Y+P+ L L R LD + + ++ +G+ YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 134
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHIT 526
R +HRD+ + NIL+++ +++DFGLAK L LD + ++
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 358 TYEELVKATDG--FADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQGER-EF 410
T E K D + ++G G FG V G LP +E VAIK LK+G + +R +F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV 468
E I+ + H +++ L G +++ +Y+ N +L + H V+ V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LV 150
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
+ G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D TT
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 528 R 528
R
Sbjct: 208 R 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 375 LGEGGFGSV-YKGYLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+KQL+ G +R+F+ E++I+ +H +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 430 GYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
G R+ L+ +Y+P+ L L R LD + + ++ +G+ YL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 146
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHIT 526
R +HRD+ + NIL+++ +++DFGLAK L LD + ++
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 21/187 (11%)
Query: 358 TYEELVKATDGFADQ---------NLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGG 404
TYE+ +A FA + ++G G FG V G LP RE VAIK LK+G
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 405 QGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL-YFHLHGEGRPVL 462
+ +R +F E I+ + H +++ L G +++ +Y+ N +L F +G+ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 463 DWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDA 521
V + G + G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 124 --IQLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 522 NTHITTR 528
TTR
Sbjct: 179 EAAYTTR 185
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 375 LGEGGFGSV-YKGYLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG+G FGSV Y P G VA+KQL+ G +R+F+ E++I+ +H +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 430 GYCISDDRR--LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
G R+ L+ +Y+P+ L L R LD + + ++ +G+ YL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 133
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHIT 526
R +HRD+ + NIL+++ +++DFGLAK L LD + ++
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 358 TYEELVKATDG--FADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQGER-EF 410
T E K D + ++G G FG V G LP +E VAIK LK+G + +R +F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV 468
E I+ + H +++ L G +++ +Y+ N +L + H V+ V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LV 150
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
+ G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D TT
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 528 R 528
R
Sbjct: 208 R 208
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 358 TYEELVKATDG--FADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQGER-EF 410
T E K D + ++G G FG V G LP +E VAIK LK+G + +R +F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV 468
E I+ + H +++ L G +++ +Y+ N +L + H V+ V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LV 150
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
+ G A G+ YL + +HRD+ + NIL+++N +VSDFGL++ L D TT
Sbjct: 151 GMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 528 R 528
R
Sbjct: 208 R 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 372 QNLLGEGGFGSVYKGYLP-DG--REVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
Q+++GEG FG V K + DG + AIK++K + + R+F E+E++ ++ HH +++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLY--------------FHLHGEGRPVLDWATRVKIAA 472
+L+G C L +Y P+ L F + L + AA
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + + IHR++ + NIL+ N+ A+++DFGL++
Sbjct: 147 DVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 21/188 (11%)
Query: 357 FTYEELVKATDGFADQ---------NLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIG- 402
FT+E+ +A FA + ++G G FG V G L P RE VAIK LK G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 403 GGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL-YFHLHGEGRPV 461
+ R+F +E I+ + H +++ L G ++I +Y+ N +L F +GR
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALD 520
+ V + G G+ YL + +HRD+ + NIL+++N +VSDFG+++ L D
Sbjct: 130 V--IQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 521 ANTHITTR 528
TTR
Sbjct: 185 PEAAYTTR 192
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ GY + +VA+K LK G + F E ++ + H LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 435 DDRRLLIYDYVPNNTLY-FHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
++ +I +++ +L F EG VL + +A A G+AY+ + IHRD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---IHRD 134
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLALD 520
++++N+L+ + +++DFGLA++ D
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIED 161
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 358 TYEELVKATDG--FADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQGER-EF 410
T E K D + ++G G FG V G LP +E VAIK LK+G + +R +F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV 468
E I+ + H +++ L G +++ +Y+ N +L + H V+ V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LV 150
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
+ G A G+ YL + + +HRD+ + NIL+++N +VSDFGL + L D TT
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 528 R 528
R
Sbjct: 208 R 208
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 351 GHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQG 406
G ++++ + + + AT+ D+ ++G G FG V G LP +E VAIK LK+G +
Sbjct: 1 GSTQTVHEFAKELDATNISIDK-VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 59
Query: 407 ER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLD 463
+R +F E I+ + H +++ L G +++ + + N +L + H V+
Sbjct: 60 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 119
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDAN 522
V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 120 ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 523 THITTR 528
TTR
Sbjct: 174 AAYTTR 179
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 146
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 146
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LG+G FG+VY + + A+K L ++ E + + EVEI S + H +++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
Y R LI +Y P T+Y L R D A L+Y H R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSK---RVI 134
Query: 491 HRDIKSSNILLDNNFEAQVSDFGLA 515
HRDIK N+LL +N E +++DFG +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS 159
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
Query: 375 LGEGGFGSV-YKGYLP----DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL- 428
LG+G FGSV Y P G VA+KQL+ G +R+F+ E++I+ +H +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 429 -VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
V Y L+ +Y+P+ L L R LD + + ++ +G+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 130
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHIT 526
R +HRD+ + NIL+++ +++DFGLAK L LD + +
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 137
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLD 163
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 372 QNLLGEGGFGSVYKGYLP--DGRE---VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHL 425
Q ++G G FG VYKG L G++ VAIK LK G + +R +F E I+ + H ++
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 426 VSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
+ L G ++I +Y+ N L L E V + G A G+ YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGMKYL---A 164
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + NIL+++N +VSDFGL+++ D
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 131
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 131
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 126
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLD 152
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 375 LGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LG+G FG+VY + + A+K L ++ E + + EVEI S + H +++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
Y R LI +Y P T+Y L R D A L+Y H R+I
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHSK---RVI 134
Query: 491 HRDIKSSNILLDNNFEAQVSDFGLA 515
HRDIK N+LL +N E +++DFG +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS 159
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V G +VAIK +K G E EF E +++ + H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 435 DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDI 494
+I +Y+ N L +L E R +++ + YL + +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 130
Query: 495 KSSNILLDNNFEAQVSDFGLAKLALD 520
+ N L+++ +VSDFGL++ LD
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLD 156
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 358 TYEELVKATDGFADQ---------NLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGG 404
TYE+ + FA + ++G G FG V G LP +E VAIK LK+G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 405 QGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPV 461
+ +R +F E I+ + H +++ L G +++ + + N +L + H V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALD 520
+ V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL++ L D
Sbjct: 147 IQ---LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 521 ANTHITTR 528
TTR
Sbjct: 201 PEAAYTTR 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 28/171 (16%)
Query: 378 GGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISR--IHHRHLVSLVGYCISD 435
G FG V+K L + VA+K I Q ++ ++ E E+ S + H +++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGA---- 86
Query: 436 DRRLLIYDYVPNNTLYFHLHGE-----GRPVLDWATRVKIAAGAARGLAYLHEDC----- 485
++R D FH G V+ W IA ARGLAYLHED
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 486 --HPRIIHRDIKSSNILLDNNFEAQVSDFGLA------KLALDANTHITTR 528
P I HRDIKS N+LL NN A ++DFGLA K A D + + TR
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 375 LGEGGFGSVYKGYLPDGR----EVAIKQLKIGGGQGE---REFKAEVEIISRIHHRHLVS 427
LG GG +VY L + +VAIK + I + E + F+ EV S++ H+++VS
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
++ DD L+ +Y+ TL ++ G +D A + G+ + H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA--INFTNQILDGIKHAHD---M 130
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
RI+HRDIK NIL+D+N ++ DFG+AK + + T V+GT
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 375 LGEGGFGSV-YKGYLPDG----REVAIKQLKI-GGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P+G +VA+K LK GG + K E+EI+ ++H ++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 429 VGYCISD--DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C D + LI +++P+ +L +L + + ++ ++K A +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
+ +HRD+ + N+L+++ + ++ DFGL K A++ + T
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXT 172
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 375 LGEGGFGSV-YKGYLPDG----REVAIKQLKI-GGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V Y P+G +VA+K LK GG + K E+EI+ ++H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 429 VGYCISD--DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C D + LI +++P+ +L +L + + ++ ++K A +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
+ +HRD+ + N+L+++ + ++ DFGL K A++ + T
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXT 184
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIG-GGQGEREFKAEVEIISRIHHRHLV 426
+ ++G G FG V G L P RE VAIK LK G + R+F +E I+ + H +++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 427 SLVGYCISDDRRLLIYDYVPNNTL-YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
L G ++I +Y+ N +L F +GR + V + G G+ YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 130
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITTR 528
+ +HRD+ + NIL+++N +VSDFG+++ L D TTR
Sbjct: 131 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
Q +G+G FG V++G G EVA+K I + ER + E EI + RH +++G+
Sbjct: 34 QESIGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRH-ENILGF 88
Query: 432 CISDDRR-------LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+D++ L+ DY + +L+ +L+ R + +K+A A GLA+LH +
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHME 145
Query: 485 C-----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N ++D GLA
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
Q +G+G FG V++G G EVA+K I + ER + E EI + RH +++G+
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVK---IFSSREERSWFREAEIYQTVMLRH-ENILGF 101
Query: 432 CISDDRR-------LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+D++ L+ DY + +L+ +L+ R + +K+A A GLA+LH +
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHME 158
Query: 485 C-----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N ++D GLA
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 374 LLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRI-HHRHLVSLVGY 431
L+G G +G VYKG ++ G+ AIK + + G + E E K E+ ++ + HHR++ + G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 432 CIS------DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
I DD+ L+ ++ ++ + L I RGL++LH+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH- 148
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
++IHRDIK N+LL N E ++ DFG++
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIG-GGQGEREFKAEVEIISRIHHRHLV 426
+ ++G G FG V G L P RE VAIK LK G + R+F +E I+ + H +++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 427 SLVGYCISDDRRLLIYDYVPNNTL-YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
L G ++I +Y+ N +L F +GR + V + G G+ YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 136
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITTR 528
+ +HRD+ + NIL+++N +VSDFG+++ L D TTR
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
Q +G+G FG V++G G EVA+K I + ER + E EI + RH +++G+
Sbjct: 14 QESIGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRH-ENILGF 68
Query: 432 CISDDRR-------LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+D++ L+ DY + +L+ +L+ R + +K+A A GLA+LH +
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHME 125
Query: 485 C-----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N ++D GLA
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 23/162 (14%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V+ D VA+K LK ++F+ E E+++ + H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 429 VGYCISDDRRLLIYDYVPNNTL--YFHLHG-------EGRP-----VLDWATRVKIAAGA 474
G C D +++++Y+ + L + HG +G+P L + + IA+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A G+ YL +HRD+ + N L+ N ++ DFG+++
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
Q +G+G FG V++G G EVA+K I + ER + E EI + RH +++G+
Sbjct: 11 QESIGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRH-ENILGF 65
Query: 432 CISDDRR-------LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+D++ L+ DY + +L+ +L+ R + +K+A A GLA+LH +
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHME 122
Query: 485 C-----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N ++D GLA
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 21/156 (13%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREV----AIKQLKIGGG-QGEREFKAEVEIISRIHHRHLV 426
+LG G FG+VYKG ++PDG V AIK L+ + +E E +++ + ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHL-HGEGR----PVLDWATRVKIAAGAARGLAYL 481
L+G C++ +L + +P L H+ GR +L+W ++ A+G++YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL 135
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
ED R++HRD+ + N+L+ + +++DFGLA+L
Sbjct: 136 -EDV--RLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
Q +G+G FG V++G G EVA+K I + ER + E EI + RH +++G+
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRH-ENILGF 62
Query: 432 CISDDRR-------LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+D++ L+ DY + +L+ +L+ R + +K+A A GLA+LH +
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHME 119
Query: 485 C-----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N ++D GLA
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
Q +G+G FG V++G G EVA+K I + ER + E EI + RH +++G+
Sbjct: 9 QESIGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRH-ENILGF 63
Query: 432 CISDDRR-------LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+D++ L+ DY + +L+ +L+ R + +K+A A GLA+LH +
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHME 120
Query: 485 C-----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N ++D GLA
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLV 426
+ ++G G FG V +G L P +E VAIK LK G + +R EF +E I+ + H +++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 427 SLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
L G + +++ +++ N L + L+ V+ V + G A G+ YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYLAEM 135
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
+ +HRD+ + NIL+++N +VSDFGL++ L+ N+ T
Sbjct: 136 SY---VHRDLAARNILVNSNLVCKVSDFGLSRF-LEENSSDPT 174
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLV 426
+ ++G G FG V +G L P +E VAIK LK G + +R EF +E I+ + H +++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 427 SLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
L G + +++ +++ N L + L+ V+ V + G A G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYLAEM 137
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
+ +HRD+ + NIL+++N +VSDFGL++ L+ N+ T
Sbjct: 138 SY---VHRDLAARNILVNSNLVCKVSDFGLSRF-LEENSSDPT 176
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 358 TYEELVKATDG--FADQNLLGEGGFGSVYKG--YLPDGRE--VAIKQLKIGGGQGER-EF 410
T E K D + ++G G FG V G LP +E VAIK LK+G + +R +F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV 468
E I+ + H +++ L G +++ + + N +L + H V+ V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LV 150
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
+ G A G+ YL + +HRD+ + NIL+++N +VSDFGL++ L D TT
Sbjct: 151 GMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 528 R 528
R
Sbjct: 208 R 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
H R+IHRDIK N+LL + E +++DFG ++ A + T + GT
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTELCGTL 170
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 149
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 150 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 358 TYEELVKATDGFADQ---------NLLGEGGFGSVYKG--YLPDGREVA--IKQLKIGGG 404
TYE+ +A FA + ++G G FG V G LP R+VA IK LK+G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 405 QGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPV 461
+ +R +F E I+ + H ++V L G +++ +++ N L + H V
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 462 LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDA 521
+ V + G A G+ YL + + +HRD+ + NIL+++N +VSDFGL+++ D
Sbjct: 145 IQL---VGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 522 NTHITTRVMG 531
+ T G
Sbjct: 199 PEAVYTTTGG 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 122
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 123 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 154
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 127
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 159
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 128
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 129 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 124
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 125 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G FG V G G +VA+K +K + F AE +++++ H +LV L+G +
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 435 DDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ L ++ +Y+ +L +L GR VL +K + + YL + +HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 133
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLA 518
+ + N+L+ + A+VSDFGL K A
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEA 158
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 149
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 150 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 128
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 129 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 125
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 126 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 124
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 125 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 124
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 125 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 140
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 141 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 128
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 129 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + + A+K L ++ E + + EVEI S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H ++IHRDIK N+LL + E +++DFG +
Sbjct: 124 CHSK---KVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G FG V G G +VA+K +K + F AE +++++ H +LV L+G +
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 435 DDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ L ++ +Y+ +L +L GR VL +K + + YL + +HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 142
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLA 518
+ + N+L+ + A+VSDFGL K A
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEA 167
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ ++ +Y+P L +L R + + +A + + YL + IHRD
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRD 155
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRL 179
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G FG V G G +VA+K +K + F AE +++++ H +LV L+G +
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 435 DDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ L ++ +Y+ +L +L GR VL +K + + YL + +HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 127
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLA 518
+ + N+L+ + A+VSDFGL K A
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEA 152
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G FG V G G +VA+K +K + F AE +++++ H +LV L+G +
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 435 DDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ L ++ +Y+ +L +L GR VL +K + + YL + +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 314
Query: 494 IKSSNILLDNNFEAQVSDFGLAKLA 518
+ + N+L+ + A+VSDFGL K A
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEA 339
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D + Q ++G G V Y P +VAIK++ + Q E E++ +S+ HH +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNT---LYFHLHGEGRP---VLDWATRVKIAAGAARGL 478
+VS + D L+ + + + H+ +G VLD +T I GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
YLH++ IHRD+K+ NILL + Q++DFG++ +V TF
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLV 426
+ ++G G FG V G+L P RE VAIK LK G + +R +F +E I+ + H +++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 427 SLVGYCISDDRRLLIYDYVPNNTL-YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC 485
L G ++I +++ N +L F +G+ + V + G A G+ YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLADMN 129
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHIT 526
+ +HR + + NIL+++N +VSDFGL++ D + T
Sbjct: 130 Y---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D + Q ++G G V Y P +VAIK++ + Q E E++ +S+ HH +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNT---LYFHLHGEGRP---VLDWATRVKIAAGAARGL 478
+VS + D L+ + + + H+ +G VLD +T I GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
YLH++ IHRD+K+ NILL + Q++DFG++ +V TF
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P +Y L + D A L+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSY 128
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 129 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 120
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 121 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 152
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P +Y L + D A L+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSY 128
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E +++DFG +
Sbjct: 129 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
AT + +G G +G+VYK P G VA+K +++ G+ EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 422 ---HRHLVSLVGYCISD--DRRL---LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAG 473
H ++V L+ C + DR + L++++V + L +L P L T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
RGL +LH +C I+HRD+K NIL+ + +++DFGLA++
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
AT + +G G +G+VYK P G VA+K +++ G+ EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 422 ---HRHLVSLVGYCISD--DRRL---LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAG 473
H ++V L+ C + DR + L++++V + L +L P L T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
RGL +LH +C I+HRD+K NIL+ + +++DFGLA++
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
AT + +G G +G+VYK P G VA+K +++ G+ EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 422 ---HRHLVSLVGYCISD--DRRL---LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAG 473
H ++V L+ C + DR + L++++V + L +L P L T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
RGL +LH +C I+HRD+K NIL+ + +++DFGLA++
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQL--KIGGGQGEREFKAEVE---IISRIHHRHLV 426
+LG G FG+V+KG ++P+G + I I G + F+A + I + H H+V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGE-----GRPVLDWATRVKIAAGAARGLAYL 481
L+G C +L + Y+P +L H+ + +L+W ++ A+G+ YL
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
E ++HR++ + N+LL + + QV+DFG+A L
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 182
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQL--KIGGGQGEREFKAEVE---IISRIHHRHLV 426
+LG G FG+V+KG ++P+G + I I G + F+A + I + H H+V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGE-----GRPVLDWATRVKIAAGAARGLAYL 481
L+G C +L + Y+P +L H+ + +L+W ++ A+G+ YL
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
E ++HR++ + N+LL + + QV+DFG+A L
Sbjct: 132 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E ++++FG +
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIANFGWS 158
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRI 420
A + F LG+G FG+VY + + A+K L ++ E + + EVEI S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H +++ L GY R LI +Y P T+Y L + D A L+Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 125
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H R+IHRDIK N+LL + E ++++FG +
Sbjct: 126 CHSK---RVIHRDIKPENLLLGSAGELKIANFGWS 157
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 369 FADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRH 424
F+D +G G FG+VY + + VAIK++ G Q +++ EV + ++ H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 425 LVSLVGYCISDDRRLLIYDYV---PNNTLYFHLHGEGRPVLDWATRVKIAA---GAARGL 478
+ G + + L+ +Y ++ L H +P+ V+IAA GA +GL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPL----QEVEIAAVTHGALQGL 167
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
AYLH +IHRD+K+ NILL ++ DFG A + AN + T
Sbjct: 168 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 213
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 375 LGEGGFGSVY----KGYLP--DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V+ LP D VA+K LK ++F+ E E+++ + H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 429 VGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV-----------KIAAGAA 475
G C L++++Y+ + L + HG +L V +A+ A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
G+ YL +HRD+ + N L+ ++ DFG+++
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G FG VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL 158
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 356 MFTYEELVKATDGFADQNLLGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER- 408
+F +E A + LG+G FG VY KG + D E VAIK + ER
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 409 EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL- 462
EF E ++ + H+V L+G L+I + + L +L E PVL
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 463 --DWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ +++A A G+AYL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGE--REFKAEVEIISRIHHRHLVSLVG 430
L+G+G FG VY G EVAI+ + I + + FK EV + H ++V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
C+S +I TLY + + + VLD +IA +G+ YLH I+
Sbjct: 97 ACMSPPHLAIITSLCKGRTLY-SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---IL 152
Query: 491 HRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H+D+KS N+ DN + ++DFGL ++
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSIS 179
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 375 LGEGGFGSVY----KGYLP--DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V+ LP D VA+K LK ++F+ E E+++ + H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 429 VGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV-----------KIAAGAA 475
G C L++++Y+ + L + HG +L V +A+ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
G+ YL +HRD+ + N L+ ++ DFG+++
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 369 FADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRH 424
F+D +G G FG+VY + + VAIK++ G Q +++ EV + ++ H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 425 LVSLVGYCISDDRRLLIYDYV---PNNTLYFHLHGEGRPVLDWATRVKIAA---GAARGL 478
+ G + + L+ +Y ++ L H +P+ V+IAA GA +GL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPL----QEVEIAAVTHGALQGL 128
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
AYLH +IHRD+K+ NILL ++ DFG A + AN + T
Sbjct: 129 AYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL 165
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL 165
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 375 LGEGGFGSVY----KGYLP--DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LGEG FG V+ LP D VA+K LK ++F+ E E+++ + H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 429 VGYCISDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRV-----------KIAAGAA 475
G C L++++Y+ + L + HG +L V +A+ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
G+ YL +HRD+ + N L+ ++ DFG+++
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL 165
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL 160
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 140
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRL 164
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 137
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRL 161
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 20/155 (12%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G +G V++G L G VA+K I + E+ + E EI + + RH +++G+ S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRH-DNILGFIAS 70
Query: 435 D-------DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC-- 485
D + LI Y + +LY L R L+ +++A AA GLA+LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQ---RQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 486 ---HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
P I HRD KS N+L+ +N + ++D GLA +
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM 162
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 138
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL 162
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 137
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRL 161
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL 160
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 333 GSGPGSDFVNSPQDPGGLGHSRSMFTY-----EELVKATDGFADQNLL------GEGGFG 381
G P + SP P + S+F EEL NLL G G FG
Sbjct: 291 GYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFG 350
Query: 382 SVYKGYLPDGR---EVAIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSLVGYCISDDR 437
SV +G + +VAIK LK G + + E E +I+ ++ + ++V L+G C ++
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-A 409
Query: 438 RLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSS 497
+L+ + L+ L G+ R + + ++ + G+ YL E +HR++ +
Sbjct: 410 LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAAR 465
Query: 498 NILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
N+LL N A++SDFGL+K +++ T R G +
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 149
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRL 173
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 138
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL 162
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL 165
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 138
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL 162
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 22/198 (11%)
Query: 333 GSGPGSDFVNSP---QDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGYL- 388
G P F P ++PG G S FT E ++A+ + ++G G G V G L
Sbjct: 18 GKLPEPQFYAEPHTYEEPGRAGRS---FTRE--IEASR-IHIEKIIGSGDSGEVCYGRLR 71
Query: 389 -PDGREV--AIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDY 444
P R+V AIK LK G + +R +F +E I+ + H +++ L G +++ +Y
Sbjct: 72 VPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 445 VPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLD 502
+ N +L + H ++ V + G G+ YL + + +HRD+ + N+L+D
Sbjct: 132 MENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVD 185
Query: 503 NNFEAQVSDFGLAKLALD 520
+N +VSDFGL+++ D
Sbjct: 186 SNLVCKVSDFGLSRVLED 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG+G FG+VY + + A+K L ++ E + + E+EI S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ + Y R L+ ++ P LY L GR D A L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCH 131
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
E ++IHRDIK N+L+ E +++DFG +
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 22/198 (11%)
Query: 333 GSGPGSDFVNSP---QDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGYL- 388
G P F P ++PG G S FT E ++A+ + ++G G G V G L
Sbjct: 18 GKLPEPQFYAEPHTYEEPGRAGRS---FTRE--IEASR-IHIEKIIGSGDSGEVCYGRLR 71
Query: 389 -PDGREV--AIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDY 444
P R+V AIK LK G + +R +F +E I+ + H +++ L G +++ +Y
Sbjct: 72 VPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131
Query: 445 VPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLD 502
+ N +L + H ++ V + G G+ YL + + +HRD+ + N+L+D
Sbjct: 132 MENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVD 185
Query: 503 NNFEAQVSDFGLAKLALD 520
+N +VSDFGL+++ D
Sbjct: 186 SNLVCKVSDFGLSRVLED 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL 165
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL 158
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG+G FG+VY + + A+K L ++ E + + E+EI S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ + Y R L+ ++ P LY L GR D A L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCH 131
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
E ++IHRDIK N+L+ E +++DFG +
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG+G FG+VY + + A+K L ++ E + + E+EI S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ + Y R L+ ++ P LY L GR D A L Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCH 132
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
E ++IHRDIK N+L+ E +++DFG +
Sbjct: 133 ER---KVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL 158
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL 160
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL 160
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL 160
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL 160
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 364 KATDGFADQNLLGEGGFG-SVYKGYLPDGREVAIKQLKIG--GGQGEREFKAEVEIISRI 420
++ + + +GEG FG ++ DGR+ IK++ I + E + EV +++ +
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEG------RPVLDWATRVKIAAGA 474
H ++V + ++ DY L+ ++ + +LDW ++ +A
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA--- 137
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
L ++H+ +I+HRDIKS NI L + Q+ DFG+A++ L++ + +GT
Sbjct: 138 ---LKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARACIGT 188
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
Query: 375 LGEGGFGSVYKGYLPDGR---EVAIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSLVG 430
LG G FGSV +G + +VAIK LK G + + E E +I+ ++ + ++V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
C ++ +L+ + L+ L G+ R + + ++ + G+ YL E +
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFV 132
Query: 491 HRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
HRD+ + N+LL N A++SDFGL+K +++ T R G +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 39/192 (20%)
Query: 369 FADQNL-----LGEGGFGSVYKG--YLPDGR----EVAIKQLKIGGGQGE-REFKAEVEI 416
F +NL LGEG FG V K + GR VA+K LK E R+ +E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 417 ISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV--------------- 461
+ +++H H++ L G C D LLI +Y +L L E R V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSS 138
Query: 462 --------LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
L + A ++G+ YL E +++HRD+ + NIL+ + ++SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 514 LAKLALDANTHI 525
L++ + ++++
Sbjct: 196 LSRDVYEEDSYV 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 21/161 (13%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G +G V+ G G +VA+K + E + E EI + RH +++G+ +
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVK---VFFTTEEASWFRETEIYQTVLMRH-ENILGFIAA 99
Query: 435 D-------DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC-- 485
D + LI DY N +LY +L LD + +K+A + GL +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 486 ---HPRIIHRDIKSSNILLDNNFEAQVSDFGLA-KLALDAN 522
P I HRD+KS NIL+ N ++D GLA K D N
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 21/151 (13%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHRHLVSLVGYC 432
+GEG +G VYK GR VA+K++++ A E+ ++ +HH ++VSL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLD------WATRVKIAA-GAARGLAYLHEDC 485
S+ L+++++ + + VLD +++KI RG+A+ H+
Sbjct: 89 HSERCLTLVFEFMEKDL---------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH- 138
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
RI+HRD+K N+L++++ +++DFGLA+
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 21/151 (13%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHRHLVSLVGYC 432
+GEG +G VYK GR VA+K++++ A E+ ++ +HH ++VSL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLD------WATRVKIAA-GAARGLAYLHEDC 485
S+ L+++++ + + VLD +++KI RG+A+ H+
Sbjct: 89 HSERCLTLVFEFMEKDL---------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH- 138
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
RI+HRD+K N+L++++ +++DFGLA+
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L E PVL + +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N + +F ++ DFG+ +
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+++H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+++H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 376 GEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISD 435
G FG V+K L + VA+K + Q ++ +++E EI S +H +L+ + ++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPL---QDKQSWQSEREIFSTPGMKH-ENLLQFIAAE 78
Query: 436 DR-------RLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC--- 485
R LI + +L +L G ++ W +A +RGL+YLHED
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 486 -----HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD KS N+LL ++ A ++DFGLA
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHR+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRN 340
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRL 364
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 153
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ LD
Sbjct: 154 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 375 LGEGGFGSVYK----GYLP--DGREVAIKQLKI-GGGQGEREFKAEVEIISRIHHRHLVS 427
+GEG FG V++ G LP VA+K LK + +F+ E +++ + ++V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG----------------------EGRPVLDWA 465
L+G C L+++Y+ L L G P L A
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 466 TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
++ IA A G+AYL E + +HRD+ + N L+ N +++DFGL++
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R ++ + +A + + YL + IHR+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRN 382
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRL 406
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G +G V++G G VA+K I + E+ + E E+ + + RH +++G+ S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVK---IFSSRDEKSWFRETELYNTVMLRH-ENILGFIAS 99
Query: 435 D-------DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC-- 485
D + LI Y +LY +L LD + ++I A GLA+LH +
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 486 ---HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N + ++D GLA
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 375 LGEGGFGSVYKGY-LPDGRE-----VAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + G+E VA+K LK E+E +E++I+S + H ++V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLH---------GEGRPVLDWATRVKIAAGAARG 477
+L+G C L+I +Y L L +GRP L+ + ++ A+G
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQG 164
Query: 478 LAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHIT 526
+A+L ++C IHRD+ + N+LL N A++ DFGLA+ ++ + +I
Sbjct: 165 MAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 39/192 (20%)
Query: 369 FADQNL-----LGEGGFGSVYKG--YLPDGR----EVAIKQLKIGGGQGE-REFKAEVEI 416
F +NL LGEG FG V K + GR VA+K LK E R+ +E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 417 ISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV--------------- 461
+ +++H H++ L G C D LLI +Y +L L E R V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSS 138
Query: 462 --------LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
L + A ++G+ YL E +++HRD+ + NIL+ + ++SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 514 LAKLALDANTHI 525
L++ + ++ +
Sbjct: 196 LSRDVYEEDSXV 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L PVL + +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVY----KGYLPDGRE--VAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY KG + D E VAIK + ER EF E ++ + H+V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-----EGRPVL---DWATRVKIAAGAARGLA 479
L+G L+I + + L +L PVL + +++A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + + +HRD+ + N ++ +F ++ DFG+ +
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G +G V++G G VA+K I + E+ + E E+ + + RH +++G+ S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK---IFSSRDEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 435 D-------DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC-- 485
D + LI Y +LY +L LD + ++I A GLA+LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 486 ---HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N + ++D GLA
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 170
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 171 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
+G+G +G V++G G VA+K I + E+ + E E+ + + RH +++G+ S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK---IFSSRDEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 435 D-------DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDC-- 485
D + LI Y +LY +L LD + ++I A GLA+LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 486 ---HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
P I HRD+KS NIL+ N + ++D GLA
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G +G VY+G + VA+K LK + E EF E ++ I H +LV L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ +I +++ L +L R + + +A + + YL + IHR+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRN 343
Query: 494 IKSSNILLDNNFEAQVSDFGLAKL 517
+ + N L+ N +V+DFGL++L
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRL 367
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 151
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLV 426
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 427 SLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHED 484
SL+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLASK 144
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 145 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKA----EVEIIS 418
++ + + + L+GEG +G V K D GR VAIK K ++ K E++++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK--KFLESDDDKMVKKIAMREIKLLK 79
Query: 419 RIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLY-FHLHGEGRPVLDWATRVKIAAGAARG 477
++ H +LV+L+ C R L++++V + L L G LD+ K G
Sbjct: 80 QLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIING 136
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ + H IIHRDIK NIL+ + ++ DFG A+
Sbjct: 137 IGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 171
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 172 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 152
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 375 LGEGGFGSVYKGY-LPDGRE-----VAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + G+E VA+K LK E+E +E++I+S + H ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLH---------GEGRPVLDWATRVKIAAGAARG 477
+L+G C L+I +Y L L +GRP L+ + ++ A+G
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQG 172
Query: 478 LAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHIT 526
+A+L ++C IHRD+ + N+LL N A++ DFGLA+ ++ + +I
Sbjct: 173 MAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLV 426
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 427 SLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHED 484
SL+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 149
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 150 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LGEG +GSVYK + G+ VAIKQ+ + +E E+ I+ + H+V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 434 SDDRRLLIYDYVPNNTL--YFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ ++ +Y ++ L + + AT I +GL YLH R IH
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLEYLH---FMRKIH 148
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK+ NILL+ A+++DFG+A
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA 172
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 355 SMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER 408
S+F +E + + LG+G FG VY+G D VA+K + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 409 -EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGR 459
EF E ++ H+V L+G L++ + + + L +L + GR
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 460 PVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
P +++AA A G+AYL+ + +HRD+ + N ++ ++F ++ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIS 434
LG G FG V+ +VA+K +K G E F AE ++ + H LV L ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 435 DDRRLLIYDYVPNNTLYFHL---HGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ +I +++ +L L G +P+ + +A A G+A++ + + IH
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL---PKLIDFSAQIAEGMAFIEQRNY---IH 134
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKLALD 520
RD++++NIL+ + +++DFGLA++ D
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIED 163
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L +C DD +L Y N L ++ G D A L YL
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 153
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 186
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 151
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQL-KIGGGQGEREFKAEVEIISRIHHRHLVS 427
LG G FG VY+G + P +VA+K L ++ Q E +F E IIS+ +H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP------VLDWATRVKIAAGAARGLAYL 481
+G + R ++ + + L L E RP L + +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK 516
E+ IHRDI + N LL A++ DFG+A+
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLV 426
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 427 SLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHED 484
SL+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 150
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 151 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 152
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA-----EVEIIS 418
AT + +G G +G+VYK P G VA+K +++ G G EV ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 419 RIH---HRHLVSLVGYCISD--DRRL---LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI 470
R+ H ++V L+ C + DR + L++++V + L +L P L T +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
RGL +LH +C I+HRD+K NIL+ + +++DFGLA++
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY+G D VA+K + ER EF E ++ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGRPVLDWATRVKIAAGAARGLA 479
L+G L++ + + + L +L + GRP +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + +HRD+ + N ++ ++F ++ DFG+ +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LGEG FG V Y G++VA+K + + + + E+ + + H H++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW-ATRVKIAAGAAR----GLAYLHEDC 485
S D +++ +Y G + D+ R K++ AR + E C
Sbjct: 82 VIKSKDEIIMVIEYA------------GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 486 HP-RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
H +I+HRD+K N+LLD + +++DFGL+ + D N
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 167
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 355 SMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER 408
S+F +E + + LG+G FG VY+G D VA+K + ER
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 409 -EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGR 459
EF E ++ H+V L+G L++ + + + L +L + GR
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 460 PVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
P +++AA A G+AYL+ + +HRD+ + N ++ ++F ++ DFG+ +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLV 426
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 427 SLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHED 484
SL+G C+ S+ L++ Y+ + L + E P + + A+G+ YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK 147
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 148 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 39/192 (20%)
Query: 369 FADQNL-----LGEGGFGSVYKG--YLPDGR----EVAIKQLKIGGGQGE-REFKAEVEI 416
F +NL LGEG FG V K + GR VA+K LK E R+ +E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 417 ISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV--------------- 461
+ +++H H++ L G C D LLI +Y +L L E R V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSS 138
Query: 462 --------LDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
L + A ++G+ YL E ++HRD+ + NIL+ + ++SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 514 LAKLALDANTHI 525
L++ + ++ +
Sbjct: 196 LSRDVYEEDSXV 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 355 SMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER 408
S+F +E + + LG+G FG VY+G D VA+K + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 409 -EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGR 459
EF E ++ H+V L+G L++ + + + L +L + GR
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 460 PVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
P +++AA A G+AYL+ + +HRD+ + N ++ ++F ++ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LGEG FG V Y G++VA+K + + + + E+ + + H H++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW-ATRVKIAAGAAR----GLAYLHEDC 485
S D +++ +Y G + D+ R K++ AR + E C
Sbjct: 72 VIKSKDEIIMVIEYA------------GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 119
Query: 486 HP-RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
H +I+HRD+K N+LLD + +++DFGL+ + D N
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 157
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 355 SMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER 408
S+F +E + + LG+G FG VY+G D VA+K + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 409 -EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGR 459
EF E ++ H+V L+G L++ + + + L +L + GR
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 460 PVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
P +++AA A G+AYL+ + +HRD+ + N ++ ++F ++ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LGEG FG V Y G++VA+K + + + + E+ + + H H++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW-ATRVKIAAGAAR----GLAYLHEDC 485
S D +++ +Y G + D+ R K++ AR + E C
Sbjct: 81 VIKSKDEIIMVIEYA------------GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 486 HP-RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
H +I+HRD+K N+LLD + +++DFGL+ + D N
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
+ LG G FG V+ +VA+K +K G E F AE ++ + H LV L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA- 250
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ + +I +++ +L L + + +A A G+A++ + + IH
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IH 307
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKLALD 520
RD++++NIL+ + +++DFGLA++ D
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIED 336
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY+G D VA+K + ER EF E ++ H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGRPVLDWATRVKIAAGAARGLA 479
L+G L++ + + + L +L + GRP +++AA A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + +HRD+ + N ++ ++F ++ DFG+ +
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKA-EVEIISRI 420
+ ++ F LG G + +VYKG G VA+K++K+ +G E+ ++ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV------LDWATRVKIAAGA 474
H ++V L ++++ L+++++ N+ + + R V L+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDND---LKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+GLA+ HE+ +I+HRD+K N+L++ + ++ DFGLA+
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LGEG FG V Y G++VA+K + + + + E+ + + H H++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW-ATRVKIAAGAAR----GLAYLHEDC 485
S D +++ +Y G + D+ R K++ AR + E C
Sbjct: 76 VIKSKDEIIMVIEYA------------GNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 486 HP-RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
H +I+HRD+K N+LLD + +++DFGL+ + D N
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 161
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 367 DGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIH 421
+ F NLLG+G F VY+ + G EVAIK + G +R + EV+I ++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLK 69
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
H ++ L Y + L+ + N + +L +P + R G+ YL
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYL 128
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA-KLALDANTHIT 526
H I+HRD+ SN+LL N +++DFGLA +L + H T
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 375 LGEGGFGSVYKGYL-PDGREVAIKQLK-IGGGQGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG V+ G L D VA+K + + +F E I+ + H ++V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
++ + V L EG L T +++ AA G+ YL C IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 493 DIKSSNILLDNNFEAQVSDFGLAKLALD 520
D+ + N L+ ++SDFG+++ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 375 LGEGGFGSVYKGYL-PDGREVAIKQLK-IGGGQGEREFKAEVEIISRIHHRHLVSLVGYC 432
+G G FG V+ G L D VA+K + + +F E I+ + H ++V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHR 492
++ + V L EG L T +++ AA G+ YL C IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 493 DIKSSNILLDNNFEAQVSDFGLAKLALD 520
D+ + N L+ ++SDFG+++ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ GREVAIK + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH-PRI 489
++ LI +Y ++ +L GR + K A R + + CH RI
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLV 426
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 427 SLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHED 484
SL+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFLASK 211
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 212 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ GREVAIK + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH-PRI 489
++ LI +Y ++ +L GR + K A R + + CH RI
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 372 QNLLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLV 426
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 427 SLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHED 484
SL+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK 152
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
+ LG G FG V+ +VA+K +K G E F AE ++ + H LV L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA- 244
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ + +I +++ +L L + + +A A G+A++ + + IH
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IH 301
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RD++++NIL+ + +++DFGLA++
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV 327
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 153
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 154 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 157
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 158 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 152
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 374 LLGEGGFGSVYKGYL--PDGREV--AIKQLKIGGGQGE-REFKAEVEIISRIHHRHLVSL 428
++G G FG VY G L DG+++ A+K L GE +F E I+ H +++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 429 VGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHEDCH 486
+G C+ S+ L++ Y+ + L + E P + + A+G+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 150
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ +HRD+ + N +LD F +V+DFGLA+ D
Sbjct: 151 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 78/188 (41%), Gaps = 11/188 (5%)
Query: 335 GPGSDFVNSPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGY-LPDGRE 393
GP D + PG + + K + F +LGEG F +V L RE
Sbjct: 1 GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSRE 60
Query: 394 VAIKQLKIGGGQGEREF---KAEVEIISRIHHRHLVSLVGYCISDDRRLLI-YDYVPNNT 449
AIK L+ E + E +++SR+ H V L + DD +L Y N
Sbjct: 61 YAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGE 119
Query: 450 LYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQV 509
L ++ G D A L YLH IIHRD+K NILL+ + Q+
Sbjct: 120 LLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 174
Query: 510 SDFGLAKL 517
+DFG AK+
Sbjct: 175 TDFGTAKV 182
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 372 QNLLGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVS 427
Q +G+G F V ++ GREVA+K + ++ ++ F+ EV I+ ++H ++V
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVK 78
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L ++ L+ +Y ++ +L GR + K A R + + CH
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 132
Query: 488 R-IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ I+HRD+K+ N+LLD + +++DFG +
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 78/188 (41%), Gaps = 11/188 (5%)
Query: 335 GPGSDFVNSPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGY-LPDGRE 393
GP D + PG + + K + F +LGEG F +V L RE
Sbjct: 1 GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSRE 60
Query: 394 VAIKQLKIGGGQGEREF---KAEVEIISRIHHRHLVSLVGYCISDDRRLLI-YDYVPNNT 449
AIK L+ E + E +++SR+ H V L + DD +L Y N
Sbjct: 61 YAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGE 119
Query: 450 LYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQV 509
L ++ G D A L YLH IIHRD+K NILL+ + Q+
Sbjct: 120 LLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQI 174
Query: 510 SDFGLAKL 517
+DFG AK+
Sbjct: 175 TDFGTAKV 182
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 27/175 (15%)
Query: 375 LGEGGFGSVYKGY-LPDGRE-----VAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + G+E VA+K LK E+E +E++I+S + H ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIAA 472
+L+G C L+I +Y L L + P L+++ + ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 473 GAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHIT 526
A+G+A+L ++C IHRD+ + N+LL N A++ DFGLA+ ++ + +I
Sbjct: 174 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGG-GQGEREFKAEVEIISRIHHRHLVS 427
LGE FG VYKG+L + VAIK LK G EF+ E + +R+ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHL-----HGE---------GRPVLDWATRVKIAAG 473
L+G D +I+ Y + L+ L H + + L+ V + A
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
A G+ YL ++H+D+ + N+L+ + ++SD GL + A+ +
Sbjct: 137 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 184
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I +Y L +L P ++++ V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGG-GQGEREFKAEVEIISRIHHRHLVS 427
LGE FG VYKG+L + VAIK LK G EF+ E + +R+ H ++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHL-----HGE---------GRPVLDWATRVKIAAG 473
L+G D +I+ Y + L+ L H + + L+ V + A
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
A G+ YL ++H+D+ + N+L+ + ++SD GL + A+ +
Sbjct: 154 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 201
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L+++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQ---GEREFKAEVEIISRIHH 422
+ F +LG+GGFG V + G+ A K+L+ + GE E +I+ +++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
R +VSL + D L+ + L FH++ G+ A V AA GL LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFG 534
+ RI++RD+K NILLD++ ++SD GLA + T I RV GT G
Sbjct: 304 RE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVG 350
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 400 KIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTL-----YFHL 454
KI +FK E++II+ I + + ++ G + D +IY+Y+ N+++ YF +
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV 139
Query: 455 HGEGRPVLDWATRVK-IAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ +K I +Y+H + I HRD+K SNIL+D N ++SDFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 514 LAKLALDA 521
++ +D
Sbjct: 198 ESEYMVDK 205
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQ---GEREFKAEVEIISRIHH 422
+ F +LG+GGFG V + G+ A K+L+ + GE E +I+ +++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
R +VSL + D L+ + L FH++ G+ A V AA GL LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFG 534
+ RI++RD+K NILLD++ ++SD GLA + T I RV GT G
Sbjct: 304 RE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVG 350
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLD--------------WATRVKI 470
+++L+G C D +I +Y L +L P ++ + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
++ L+G C D +I +Y L +L P ++++ V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF Y+ D +EV K + + Q E+ E+ I + + H+V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ DD ++ + +L LH + V + R +G+ YLH + R
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 162
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA-KLALDANTHIT 526
+IHRD+K N+ L+++ + ++ DFGLA K+ D T
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT 201
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF Y+ D +EV K + + Q E+ E+ I + + H+V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ DD ++ + +L LH + V + R +G+ YLH + R
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 162
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA-KLALD 520
+IHRD+K N+ L+++ + ++ DFGLA K+ D
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF Y+ D +EV K + + Q E+ E+ I + + H+V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ DD ++ + +L LH + V + R +G+ YLH + R
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 162
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA-KLALD 520
+IHRD+K N+ L+++ + ++ DFGLA K+ D
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 39/178 (21%)
Query: 369 FADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVS 427
F + L+G GGFG V+K + DG+ I+++K + ERE KA ++++ H ++V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIVH 69
Query: 428 LVGYCI--------SDDRRLLIYDYVPNNT----------LYFHLHGEGRPVLD-WATR- 467
G C + D L DY P N+ L+ + + L+ W +
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 468 ----------VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+++ +G+ Y+H ++IHRD+K SNI L + + ++ DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY+G D VA+K + ER EF E ++ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGRPVLDWATRVKIAAGAARGLA 479
L+G L++ + + + L +L + GRP +++AA A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + +HR++ + N ++ ++F ++ DFG+ +
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K +VA+K LK + + + +E+E++ I H++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKI 470
+++L+G C D +I +Y L +L P L++ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A ARG+ YL + IHRD+ + N+L+ + +++DFGLA+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 375 LGEGGFGSVYKGYLPD------GREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRHLVS 427
LG+G FG VY+G D VA+K + ER EF E ++ H+V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHL--------HGEGRPVLDWATRVKIAAGAARGLA 479
L+G L++ + + + L +L + GRP +++AA A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
YL+ + +HR++ + N ++ ++F ++ DFG+ +
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 106 G-VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 160
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKI--GGGQGEREFKAEVEIISRIHHRHLVSLVGYC 432
L E G ++KG G ++ +K LK+ + R+F E + H +++ ++G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 433 ISDD--RRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
S LI ++P +LY LH V+D + VK A ARG+A+LH P I
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIP 135
Query: 491 HRDIKSSNILLDNNFEAQVS 510
+ S ++++D + A++S
Sbjct: 136 RHALNSRSVMIDEDMTARIS 155
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 375 LGEGGFGSVYKGY-LPDGRE-----VAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + G+E VA+K LK E+E +E++I+S + H ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR-----PVLDWA-----TR--VKIAAGA 474
+L+G C L+I +Y L L + R P A TR + ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 475 ARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHIT 526
A+G+A+L ++C IHRD+ + N+LL N A++ DFGLA+ ++ + +I
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 375 LGEGGFGSVYKGY-LPDGRE-----VAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + G+E VA+K LK E+E +E++I+S + H ++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR-----PVLDWA-----TR--VKIAAGA 474
+L+G C L+I +Y L L + R P A TR + ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 475 ARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHIT 526
A+G+A+L ++C IHRD+ + N+LL N A++ DFGLA+ ++ + +I
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKA-------EVEIISRIHHRHLVS 427
+GEG +G VYK G A+K++++ E+E + E+ I+ + H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + R +L+++++ + EG L+ T G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
R++HRD+K N+L++ E +++DFGLA+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 137
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-----KGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIH 421
D F LG+G FG+VY K + +V K +I E + + E+EI + +H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS-QIEKEGVEHQLRREIEIQAHLH 81
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
H +++ L Y R LI +Y P LY L D I A L Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMY- 138
Query: 482 HEDCH-PRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
CH ++IHRDIK N+LL E +++DFG +
Sbjct: 139 ---CHGKKVIHRDIKPENLLLGLKGELKIADFGWS 170
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF Y+ D +EV K + + Q E+ E+ I + + H+V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 91
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ DD ++ + +L LH + V + R +G+ YLH + R
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 146
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA-KLALD 520
+IHRD+K N+ L+++ + ++ DFGLA K+ D
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 179
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKA-------EVEIISRIHHRHLVS 427
+GEG +G VYK G A+K++++ E+E + E+ I+ + H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + R +L+++++ + EG L+ T G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
R++HRD+K N+L++ E +++DFGLA+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKA-------EVEIISRIHHRHLVS 427
+GEG +G VYK G A+K++++ E+E + E+ I+ + H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + R +L+++++ + EG L+ T G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
R++HRD+K N+L++ E +++DFGLA+
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 27/177 (15%)
Query: 356 MFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGR---EVAIKQL-KIGGGQGEREF 410
+ +E +V +D ++G+G FG VY G Y+ + + AIK L +I Q F
Sbjct: 15 LIPHERVVTHSD-----RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF 69
Query: 411 KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATR--- 467
E ++ ++H ++++L+G +L + +P+ L + HG+ + R
Sbjct: 70 LREGLLMRGLNHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPT 122
Query: 468 ----VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+ ARG+ YL E + +HRD+ + N +LD +F +V+DFGLA+ LD
Sbjct: 123 VKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I Y L +L P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF ++ D +EV K L + Q E+ E+ I + H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ +D ++ + +L LH + + + R + G YLH + R
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-IVLGCQYLHRN---R 141
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRD+K N+ L+ + E ++ DFGLA
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF ++ D +EV K L + Q E+ E+ I + H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ +D ++ + +L LH + + + R + G YLH + R
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-IVLGCQYLHRN---R 161
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRD+K N+ L+ + E ++ DFGLA
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF ++ D +EV K L + Q E+ E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ +D ++ + +L LH + + + R + G YLH + R
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-IVLGCQYLHRN---R 137
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRD+K N+ L+ + E ++ DFGLA
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA+K + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L GR + K A R + + CH + I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF ++ D +EV K L + Q E+ E+ I + H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ +D ++ + +L LH + + + R + G YLH + R
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-IVLGCQYLHRN---R 159
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRD+K N+ L+ + E ++ DFGLA
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF ++ D +EV K L + Q E+ E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ +D ++ + +L LH + + + R + G YLH + R
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-IVLGCQYLHRN---R 137
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRD+K N+ L+ + E ++ DFGLA
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISR 419
K + F +LGEG F +V L RE AIK L+ E + E +++SR
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 420 IHHRHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
+ H V L + DD +L Y N L ++ G D A L
Sbjct: 67 LDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSAL 123
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
YLH IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 159
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
+HRDI + N+L+ +N ++ DFGL++ D+
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA+K + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L GR + K A R + + CH + I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 129
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 373 NLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLV 426
+ LGEG F +VYK + + VAIK++K+G R E++++ + H +++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L+ L++D++ + + + VL + +GL YLH+
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEV--IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
I+HRD+K +N+LLD N +++DFGLAK
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 135
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA+K + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L GR + K A R + + CH + I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RF 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ G R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISR 419
K + F +LGEG F +V L RE AIK L+ E + E +++SR
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 420 IHHRHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
+ H V L + DD +L Y N L ++ G D A L
Sbjct: 64 LDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSAL 120
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
YLH IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 156
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 375 LGEGGFGSVY--------KGYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRH 424
LGEG FG V K + VA+K LK + + + +E+E++ I H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA--------------TRVKI 470
+++L+G C D +I Y L +L P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ YL + IHRD+ + N+L+ N +++DFGLA+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ G R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH-GEGRPVLDWATRVKIAAGAARGLA 479
L + S + L+ DYVP H + L R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV-----AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSL 428
LG+GGF ++ D +EV K L + Q E+ E+ I + H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
G+ +D ++ + +L LH + + + R + G YLH + R
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-IVLGCQYLHRN---R 135
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRD+K N+ L+ + E ++ DFGLA
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISR 419
K + F +LGEG F +V L RE AIK L+ E + E +++SR
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 420 IHHRHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
+ H V L + DD +L Y N L ++ G D A L
Sbjct: 66 LDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSAL 122
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
YLH IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 158
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISR 419
K + F +LGEG F +V L RE AIK L+ E + E +++SR
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 420 IHHRHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
+ H V L + DD +L Y N L ++ G D A L
Sbjct: 65 LDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSAL 121
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
YLH IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 122 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 157
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGREV--AIKQLK---IGGGQGEREFKAEVEIISR-IHHRHLVS 427
++G+G FG V EV A+K L+ I + E+ +E ++ + + H LV
Sbjct: 45 VIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + D+ + DY+ L++HL E R L+ R AA A L YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARF-YAAEIASALGYLHSL--- 158
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
I++RD+K NILLD+ ++DFGL K ++ N+ +T
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST 198
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSL 428
+ LG G FG V G + G +VA+K L KI + + E++ + H H++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ ++ +YV L+ ++ GR LD ++ G+ Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
++HRD+K N+LLD + A+++DFGL+ + D
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGR----EVAIKQLKIGGGQGERE-FKAEVEIISR 419
A + +LGEG FG VY+G + + VA+K K +E F +E I+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLA 479
+ H H+V L+G I ++ +I + P L +L + L T V + + +A
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMA 139
Query: 480 YLHE-DCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
YL +C +HRDI NIL+ + ++ DFGL++ D + +
Sbjct: 140 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 181
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 81
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH----GEGRPVLDWATRVKI-AAGAA 475
L + S + L+ DYVP H + PV+ VK+
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 137
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
R LAY+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 155
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 216 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 372 QNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIH-HRHLVSL- 428
+ +L EGGF VY+ + GRE A+K+L + R EV + ++ H ++V
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 429 ----VGYCISDDRR---LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+G SD + LL+ + + F E R L T +KI R + ++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
H P IIHRD+K N+LL N ++ DFG A
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 24/174 (13%)
Query: 364 KATDGFADQNLL------GEGGFGSVYKGYLP--DGR--EVAIKQLKI-GGGQGE-REFK 411
K D D+NLL GEG FGSV +G L DG +VA+K +K+ Q E EF
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 412 AEVEIISRIHHRHLVSLVGYCISDDRR-----LLIYDYVPNNTLYFHLH----GEGRPVL 462
+E + H +++ L+G CI + ++I ++ L+ +L G +
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 463 DWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
T +K A G+ YL + +HRD+ + N +L ++ V+DFGL+K
Sbjct: 145 PLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 104
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH----GEGRPVLDWATRVKI-AAGAA 475
L + S + L+ DYVP H + PV+ VK+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 160
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
R LAY+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 112
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH----GEGRPVLDWATRVKI-AAGAA 475
L + S + L+ DYVP H + PV+ VK+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 168
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
R LAY+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH----GEGRPVLDWATRVKI-AAGAA 475
L + S + L+ DYVP H + PV+ VK+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 166
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
R LAY+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 374 LLGEGGFGSVYKGYLPDGR----EVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL 428
+LGEG FG VY+G + + VA+K K +E F +E I+ + H H+V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE-DCHP 487
+G I ++ +I + P L +L + L T V + + +AYL +C
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC-- 134
Query: 488 RIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
+HRDI NIL+ + ++ DFGL++ D + +
Sbjct: 135 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ G R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH----GEGRPVLDWATRVKI-AAGAA 475
L + S + L+ DYVP H + PV+ VK+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI----YVKLYMYQLF 166
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
R LAY+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 114
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 175 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 80
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 141 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ +N ++ DFGL++ D+ + ++
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH-GEGRPVLDWATRVKIAAGAARGLA 479
L + S + L+ DYVP H + L R LA
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGR----EVAIKQLKIGGGQGERE-FKAEVEIISR 419
A + +LGEG FG VY+G + + VA+K K +E F +E I+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLA 479
+ H H+V L+G I ++ +I + P L +L + L T V + + +A
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMA 123
Query: 480 YLHE-DCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
YL +C +HRDI NIL+ + ++ DFGL++ D + +
Sbjct: 124 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 165
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 89
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 150 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 77
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 138 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 95
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 156 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLH-GEGRPVLDWATRVKIAAGAARGLA 479
L + S + L+ DYVP H + L R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 84
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 145 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 367 DGFADQNLLGEGGFGSVYKGY----LPDGREVAIKQLK----IGGGQGEREFKAEVEIIS 418
+ F +LG+GG+G V++ G+ A+K LK + + KAE I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 419 RIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
+ H +V L+ + + LI +Y+ L+ L EG + D T A + L
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED--TACFYLAEISMAL 134
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
+LH+ II+RD+K NI+L++ +++DFGL K ++ T +T GT
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGT 184
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 367 DGFADQNLLGEGGFGSVYKGY----LPDGREVAIKQLK----IGGGQGEREFKAEVEIIS 418
+ F +LG+GG+G V++ G+ A+K LK + + KAE I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 419 RIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
+ H +V L+ + + LI +Y+ L+ L EG + D T A + L
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED--TACFYLAEISMAL 134
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
+LH+ II+RD+K NI+L++ +++DFGL K ++ T +T GT
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGT 184
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
+ D ++G G FG VY+ L D G VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 427 SLVGYCISDDRRL------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLA 479
L + S + L+ DYVP H VK+ R LA
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
Y+H I HRDIK N+LLD + ++ DFG AK
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 375 LGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG+G FG VYK + G A K ++ + ++ E+EI++ H ++V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 434 SDDRRLLIYDYVPN---NTLYFHL-HGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
D + ++ ++ P + + L G P + R + A L +LH RI
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA-----LNFLHSK---RI 130
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
IHRD+K+ N+L+ + +++DFG++
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 151
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 152 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 184
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA++ + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L GR + K A R + + CH + I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 375 LGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG+G FG VYK + G A K ++ + ++ E+EI++ H ++V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 434 SDDRRLLIYDYVPN---NTLYFHL-HGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
D + ++ ++ P + + L G P + R + A L +LH RI
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA-----LNFLHSK---RI 138
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
IHRD+K+ N+L+ + +++DFG++
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 36/183 (19%)
Query: 375 LGEGGFGSVYKGY-LPDGRE-----VAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + G+E VA+K LK E+E +E++I+S + H ++V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLH----------------------GEGRPVLDW 464
+L+G C L+I +Y L L +GRP L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP-LEL 157
Query: 465 ATRVKIAAGAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANT 523
+ ++ A+G+A+L ++C IHRD+ + N+LL N A++ DFGLA+ ++ +
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 524 HIT 526
+I
Sbjct: 214 YIV 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA++ + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L GR + K A R + + CH + I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGS-VYKGYLPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F + V L RE AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 130
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 131 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 163
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 145
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREF---KAEVEIISRIHH 422
+ F +LGEG F +V L RE AIK L+ E + E +++SR+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 423 RHLVSLVGYCISDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
V L + DD +L Y N L ++ G D A L YL
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 145
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H IIHRD+K NILL+ + Q++DFG AK+
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKGY-LPDG-REVAIKQLKIGGGQGEREFKAEVEI--- 416
L +A + +GEG +G V+K L +G R VA+K++++ G+ E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 417 --ISRIHHRHLVSLVGYCI-----SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK 469
+ H ++V L C + + L++++V + L +L P + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 470 IAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
+ RGL +LH R++HRD+K NIL+ ++ + +++DFGLA++
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHH 422
D F D +LG GGFG V+ + G+ A K+L + + ++ E +I++++H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVKIAAGAARGLAY 480
R +VSL + L+ + + +H++ E P + A GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFG 534
LH+ II+RD+K N+LLD++ ++SD GLA + L A T GT G
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPG 354
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHH 422
D F D +LG GGFG V+ + G+ A K+L + + ++ E +I++++H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVKIAAGAARGLAY 480
R +VSL + L+ + + +H++ E P + A GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFG 534
LH+ II+RD+K N+LLD++ ++SD GLA + L A T GT G
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPG 354
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHH 422
D F D +LG GGFG V+ + G+ A K+L + + ++ E +I++++H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVKIAAGAARGLAY 480
R +VSL + L+ + + +H++ E P + A GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFG 534
LH+ II+RD+K N+LLD++ ++SD GLA + L A T GT G
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPG 354
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG--YLPDGREVAIKQLKIGGGQGEREFKAEVEI--- 416
L +A + +GEG +G V+K GR VA+K++++ G+ E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 417 --ISRIHHRHLVSLVGYCI-----SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK 469
+ H ++V L C + + L++++V + L +L P + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 470 IAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
+ RGL +LH R++HRD+K NIL+ ++ + +++DFGLA++
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHH 422
D F D +LG GGFG V+ + G+ A K+L + + ++ E +I++++H
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVKIAAGAARGLAY 480
R +VSL + L+ + + +H++ E P + A GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTFG 534
LH+ II+RD+K N+LLD++ ++SD GLA + L A T GT G
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPG 354
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA+K + ++ ++ F+ EV I+ ++H ++V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L G W + K A R + + CH + I
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHG-----W-MKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 375 LGEGGFGSVYKGY--LPDGREVAIKQLKIGGGQGEREFKA-EVEIISRIHHRHLVSLVGY 431
LGEG + +VYKG L D VA+K++++ +G EV ++ + H ++V+L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ L+++Y+ + L +L G +++ RGLAY H +++H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAK 516
RD+K N+L++ E +++DFGLA+
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR 148
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSV-YKGYLPDGREVAIKQL-KIGGGQGEREFKAEVEI 416
Y+EL+K + +G GGF V ++ G VAIK + K G K E+E
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 417 ISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR 476
+ + H+H+ L + ++ ++ +Y P L+ ++ + R + + TRV +
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRV-VFRQIVS 119
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL-AKLALDANTHITT 527
+AY+H + HRD+K N+L D + ++ DFGL AK + + H+ T
Sbjct: 120 AVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 362 LVKATDGFADQNLLGEGGFGSVYKG--YLPDGREVAIKQLKIGGGQGEREFKAEVEI--- 416
L +A + +GEG +G V+K GR VA+K++++ G+ E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 417 --ISRIHHRHLVSLVGYCI-----SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK 469
+ H ++V L C + + L++++V + L +L P + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 470 IAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
+ RGL +LH R++HRD+K NIL+ ++ + +++DFGLA++
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 356 MFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREFKA-- 412
M YE+L K +GEG +G+V+K + E VA+K++++ A
Sbjct: 1 MQKYEKLEK----------IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR 50
Query: 413 EVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAA 472
E+ ++ + H+++V L SD + L++++ + + G LD
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD--LDPEIVKSFLF 108
Query: 473 GAARGLAYLHEDCHPR-IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+GL + CH R ++HRD+K N+L++ N E +++DFGLA+
Sbjct: 109 QLLKGLGF----CHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGREVAIKQLKI----GGGQGEREFKAEVEIISRIHHRH 424
F +G+G FG V+KG D R + +KI + + E+ ++S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+ G + D + +I +Y+ + L E P LD I +GL YLH +
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGP-LDETQIATILREILKGLDYLHSE 143
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
+ IHRDIK++N+LL + E +++DFG+A D T V F
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 369 FADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVS 427
F + L+G GGFG V+K + DG+ IK++K + ERE KA ++++ H ++V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIVH 68
Query: 428 LVGYCI----------------SDDRRLLI-YDYVPNNTLYFHLHGEGRPVLDWATRVKI 470
G C S + L I ++ TL + LD +++
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+G+ Y+H ++I+RD+K SNI L + + ++ DFGL
Sbjct: 128 FEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGREVAIKQLKI----GGGQGEREFKAEVEIISRIHHRH 424
F +G+G FG V+KG D R + +KI + + E+ ++S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+ G + D + +I +Y+ + L E P LD I +GL YLH +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGP-LDETQIATILREILKGLDYLHSE 123
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
+ IHRDIK++N+LL + E +++DFG+A D T V F
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 169
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 341 VNSPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQL 399
V+ P P H R + + V + + +LG G FG V+K G ++A K +
Sbjct: 64 VDIPAPPAPFDH-RIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKII 122
Query: 400 KIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
K G + + E K E+ +++++ H +L+ L S + +L+ +YV L+ + E
Sbjct: 123 KTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY 182
Query: 460 PVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVS--DFGLAK 516
+ + T + G+ ++H+ I+H D+K NIL N Q+ DFGLA+
Sbjct: 183 NLTELDT-ILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGREVAIKQLKI----GGGQGEREFKAEVEIISRIHHRH 424
F +G+G FG V+KG D R + +KI + + E+ ++S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+ G + D + +I +Y+ + L E P LD I +GL YLH +
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGP-LDETQIATILREILKGLDYLHSE 138
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ IHRDIK++N+LL + E +++DFG+A
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 373 NLLGEGGFGSVY---KGYLPD-GREVAIKQLKIGGGQGEREFKAEVE--IISRIHHRHLV 426
+LG+G FG V+ K PD G A+K LK + + ++E I++ ++H +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLAYLHEDC 485
L ++ + LI D++ L+ L E V+ VK A A GL +LH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
II+RD+K NILLD +++DFGL+K A+D
Sbjct: 151 ---IIYRDLKPENILLDEEGHIKLTDFGLSKEAID 182
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ ++ DFGL++ D+ + ++
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G+G F V ++ G+EVA+K + ++ ++ F+ EV I ++H ++V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-I 489
++ L+ +Y ++ +L GR + K A R + + CH + I
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGR------XKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLA 515
+HRD+K+ N+LLD + +++DFG +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHL 425
D D+ +LG+G +G VY G L + +AIK++ + + E+ + + H+++
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 426 VSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLAYLHED 484
V +G + + + VP +L L + P+ D + GL YLH++
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 485 CHPRIIHRDIKSSNILLDNNFEA--QVSDFGLAK 516
+I+HRDIK N+L+ N + ++SDFG +K
Sbjct: 142 ---QIVHRDIKGDNVLI-NTYSGVLKISDFGTSK 171
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGREVAIKQLKI----GGGQGEREFKAEVEIISRIHHRH 424
F +G+G FG V+KG D R + +KI + + E+ ++S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+ G + D + +I +Y+ + L E P LD I +GL YLH +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGP-LDETQIATILREILKGLDYLHSE 123
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ IHRDIK++N+LL + E +++DFG+A
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE- 122
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHL 425
D D+ +LG+G +G VY G L + +AIK++ + + E+ + + H+++
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 426 VSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLAYLHED 484
V +G + + + VP +L L + P+ D + GL YLH++
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 485 CHPRIIHRDIKSSNILLDNNFEA--QVSDFGLAK 516
+I+HRDIK N+L+ N + ++SDFG +K
Sbjct: 128 ---QIVHRDIKGDNVLI-NTYSGVLKISDFGTSK 157
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE- 122
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 140
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
R IHRD+ + N+LL ++ DFGL + + H
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 185
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
H +I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 186 -H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 229
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 355 SMFTYEELVKATDGFADQNLL-------GEGGFGSVYKGYLPDGREVAIKQLKIGGGQG- 406
S F E ++ + + D+ LL G G FG+V KGY + V +KI +
Sbjct: 350 SPFADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 409
Query: 407 ----EREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+ E AE ++ ++ + ++V ++G C ++ +L+ + L +L + R V
Sbjct: 410 DPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQ-QNRHVK 467
Query: 463 DWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDA 521
D +++ + G+ YL E +HRD+ + N+LL A++SDFGL+K L D
Sbjct: 468 D-KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
Query: 522 NTH 524
N +
Sbjct: 524 NYY 526
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 140
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
R IHRD+ + N+LL ++ DFGL + + H
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 134
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
R IHRD+ + N+LL ++ DFGL + + H
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE- 122
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE- 122
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 130
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
R IHRD+ + N+LL ++ DFGL + AL N
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQN 164
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 124 H--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 134
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
R IHRD+ + N+LL ++ DFGL + + H
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSL 428
+ LG G FG V G + G +VA+K L KI + K E++ + H H++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ ++ +YV L+ ++ GR V + R ++ + Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEAR-RLFQQILSAVDYCHRHM--- 131
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
++HRD+K N+LLD + A+++DFGL+ + D
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 130
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
R IHRD+ + N+LL ++ DFGL + + H
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSL 428
+ LG G FG V G + G +VA+K L KI + K E++ + H H++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ ++ +YV L+ ++ GR A R+ +A + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-----M 131
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
++HRD+K N+LLD + A+++DFGL+ + D
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 375 LGEGGFGSVYKGYL--PDGR--EVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVS 427
LG+G FG V +G P G+ VA+K LK + + +F EV + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
L G ++ ++ + + P +L L +G +L T + A A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 130
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
R IHRD+ + N+LL ++ DFGL + AL N
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQN 164
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 375 LGEGGFGSVYKG-YL-PD--GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLV 429
+GEG FG V++G Y+ P+ VAIK K RE F E + + H H+V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G I+++ +I + L L + LD A+ + A + LAYL R
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
+HRDI + N+L+ ++ DFGL++ D+ + ++
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 356 MFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREFKA-- 412
M YE+L K +GEG +G+V+K + E VA+K++++ A
Sbjct: 1 MQKYEKLEK----------IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR 50
Query: 413 EVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAA 472
E+ ++ + H+++V L SD + L++++ + + G LD
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD--LDPEIVKSFLF 108
Query: 473 GAARGLAYLHEDCHPR-IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+GL + CH R ++HRD+K N+L++ N E ++++FGLA+
Sbjct: 109 QLLKGLGF----CHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE- 149
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 150 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLRE- 141
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 142 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 186
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGER---EFKAEVEIISRIH 421
+D + +LG GG V+ L D R+VA+K L+ + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 422 HRHLVSL--VGYCISDDRRL--LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
H +V++ G + L ++ +YV TL +H EG A +++ A A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQA 128
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHI--TTRVMGT 532
L + H++ IIHRD+K +NIL+ +V DFG+A+ D+ + T V+GT
Sbjct: 129 LNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYCI 433
LG+G FG VYK + +A ++ + E E + E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
++ ++ ++ + + RP+ + +V + L YLH++ +IIHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRD 160
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
+K+ NIL + + +++DFG++
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYCI 433
LG+G FG VYK + +A ++ + E E + E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
++ ++ ++ + + RP+ + +V + L YLH++ +IIHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRD 160
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
+K+ NIL + + +++DFG++
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 349 GLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQLKIGGGQGE 407
+ H R V + F + +G+G FG VYKG +EV AIK + + + E
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDE 60
Query: 408 REF-KAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP-VLDWA 465
E + E+ ++S+ ++ G + + +I +Y+ + L +P L+
Sbjct: 61 IEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEET 116
Query: 466 TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
I +GL YLH + R IHRDIK++N+LL + +++DFG+A
Sbjct: 117 YIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYCI 433
LG+G FG VYK + +A ++ + E E + E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
++ ++ ++ + + RP+ + +V + L YLH++ +IIHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRD 160
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
+K+ NIL + + +++DFG++
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 132
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 126
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFH----LHGEGRPVLDWATRVKIAAGAARG 477
H ++V L+ ++++ L++++V + F L G P++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 118
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V+K + P G +A K + + R + E++++ + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+V G SD + +++ +L L GR +V IA +GL YL E
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 126
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
+I+HRD+K SNIL+++ E ++ DFG++ +D AN + TR
Sbjct: 127 --HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR 170
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 138
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGER---EFKAEVEIISRIH 421
+D + +LG GG V+ L D R+VA+K L+ + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 422 HRHLVSLVGYCISDDRR----LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
H +V++ ++ ++ +YV TL +H EG A +++ A A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQA 128
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHI--TTRVMGT 532
L + H++ IIHRD+K +NI++ +V DFG+A+ D+ + T V+GT
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L+++ H+H + + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKI--GGGQGEREFKAEVEIISRIHHRHLVSLVGYC 432
L E G ++KG G ++ +K LK+ + R+F E + H +++ ++G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 433 ISDD--RRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
S LI + P +LY LH V+D + VK A ARG A+LH P I
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIP 135
Query: 491 HRDIKSSNILLDNNFEAQVS 510
+ S ++ +D + A++S
Sbjct: 136 RHALNSRSVXIDEDXTARIS 155
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 148
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 148
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 146
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----EREFKAEVEIISRIHHRHLVSLV 429
LG G FG+V KGY + V +KI + + E AE ++ ++ + ++V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
G C ++ +L+ + L +L + R V D +++ + G+ YL E
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNIIELVHQVSMGMKYLEES---NF 128
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
+HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGER---EFKAEVEIISRIH 421
+D + +LG GG V+ L D R+VA+K L+ + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 422 HRHLVSLVGYCISDDRR----LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
H +V++ ++ ++ +YV TL +H EG A +++ A A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQA 128
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHI--TTRVMGT 532
L + H++ IIHRD+K +NI++ +V DFG+A+ D+ + T V+GT
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 361 ELVKATDGFADQNLL-------GEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-----ER 408
E ++ + + D+ LL G G FG+V KGY + V +KI + +
Sbjct: 357 EEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD 416
Query: 409 EFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRV 468
E AE ++ ++ + ++V ++G C ++ +L+ + L +L + R V D +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQ-QNRHVKD-KNII 473
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTH 524
++ + G+ YL E +HRD+ + N+LL A++SDFGL+K L D N +
Sbjct: 474 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 23/178 (12%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGYLPDG-REVAIKQLK--IGGGQGEREFKAEVEIISR 419
VK D + ++L+G G +G VY Y + + VAIK++ + E+ I++R
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR--------PVLDWATRVK-I 470
+ +++ L I +D LL +D LY L P+ VK I
Sbjct: 84 LKSDYIIRLHDLIIPED--LLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEQHVKTI 136
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK-LALDANTHITT 527
G ++HE IIHRD+K +N LL+ + ++ DFGLA+ + D + HI
Sbjct: 137 LYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN 191
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 360 EELVKATDGFADQNLLGEGGFGSVYKGYLP--DGR--EVAIKQLK--IGGGQGEREFKAE 413
E+++ F +LG+G FGSV + L DG +VA+K LK I EF E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 414 VEIISRIHHRHLVSLVGYCISDDRR------LLIYDYVPNNTLYFHLH----GEGRPVLD 463
+ H H+ LVG + + ++I ++ + L+ L GE L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
T V+ A G+ YL IHRD+ + N +L + V+DFGL++
Sbjct: 136 LQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 368 GFADQNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVS 427
+ + ++G G FG V++ L + EVAIK++ Q +R E++I+ + H ++V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL----QDKRFKNRELQIMRIVKHPNVVD 96
Query: 428 LVGYCISD-DRR-----LLIYDYVPNNTLYFHLH----GEGRPVLDWATRVKI-AAGAAR 476
L + S+ D++ L+ +YVP H + P+L +K+ R
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML----LIKLYMYQLLR 152
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDANTHIT 526
LAY+H I HRDIK N+LLD + ++ DFG AK+ + +++
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR----- 476
H ++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 477 ---GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFH----LHGEGRPVLDWATRVKIAAGAARG 477
H ++V L+ ++++ L+++++ + F L G P++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 118
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 119 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFH----LHGEGRPVLDWATRVKIAAGAARG 477
H ++V L+ ++++ L+++++ + F L G P++ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 116
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 117 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKA---EVEIISRIHH 422
D F +LG+G FG V + + G A+K LK + + + E I+S +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 423 RHLVSLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
++ + C + DR + ++V L FH+ R D A AA L +L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFL 140
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
H+ II+RD+K N+LLD+ +++DFG+ K + N T GT
Sbjct: 141 HDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI-CNGVTTATFCGT 187
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFH----LHGEGRPVLDWATRVKIAAGAARG 477
H ++V L+ ++++ L+++++ + F L G P++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----SYLFQLLQG 118
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 375 LGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL---- 428
LG GGFG V + D G +VAIKQ + RE + E++I+ +++H ++VS
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 429 --VGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDC 485
+ +D LL +Y L +L+ E L + + + L YLHE+
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN- 141
Query: 486 HPRIIHRDIKSSNILLD---NNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
RIIHRD+K NI+L ++ D G AK LD + T +GT
Sbjct: 142 --RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELDQG-ELCTEFVGTL 188
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 375 LGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSL---- 428
LG GGFG V + D G +VAIKQ + RE + E++I+ +++H ++VS
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 429 --VGYCISDDRRLLIYDYVPNNTLYFHLHG-EGRPVLDWATRVKIAAGAARGLAYLHEDC 485
+ +D LL +Y L +L+ E L + + + L YLHE+
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN- 140
Query: 486 HPRIIHRDIKSSNILLD---NNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
RIIHRD+K NI+L ++ D G AK LD + T +GT
Sbjct: 141 --RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-ELDQG-ELCTEFVGTL 187
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 79/159 (49%), Gaps = 15/159 (9%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ + F +GEG +G VYK G VA+K++++ A E+ ++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFH----LHGEGRPVLDWATRVKIAAGAARG 477
H ++V L+ ++++ L+++++ + F L G P++ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----SYLFQLLQG 117
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Query: 323 IKTQSSAPL-IGSGPGSDFVNSPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFG 381
+K Q++A + SG SD + + L + T E F LLG+G FG
Sbjct: 110 LKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNE-------FEYLKLLGKGTFG 162
Query: 382 SV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSLVGYCISDDR 437
V GR A+K LK + E E ++ H L +L + DR
Sbjct: 163 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR 222
Query: 438 RLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSS 497
+ +Y L+FHL E D A A L YLH + +++RD+K
Sbjct: 223 LCFVMEYANGGELFFHLSRERVFSEDRARFY--GAEIVSALDYLHSE--KNVVYRDLKLE 278
Query: 498 NILLDNNFEAQVSDFGLAK 516
N++LD + +++DFGL K
Sbjct: 279 NLMLDKDGHIKITDFGLCK 297
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 427 SLVGYCISDDRRLLIY------------------DYVPNNTLYFHLHGEGRPVLDWATRV 468
+L+G C L++ ++VP LY + L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY-------KDFLTLEHLI 147
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+K++++ A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GL++ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKAEVEIISRIH 421
++ F + +LG+G FG V K D R AIK+++ + +EV +++ ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 422 HRHLVSLVGYCISDDRRLLI---------------YDYVPNNTLYFHLHGEGRPVLD--- 463
H+++V Y +RR + +Y N TLY +H E
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
W ++ L+Y+H IIHRD+K NI +D + ++ DFGLAK
Sbjct: 119 W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 375 LGEGGFGSV-YKGYLPDGREVAIKQLK---IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
LGEG FG V + ++VA+K + + + E+ + + H H++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
+ +++ +Y L+ ++ + R D R A + Y H +I+
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRH---KIV 130
Query: 491 HRDIKSSNILLDNNFEAQVSDFGLAKLALDAN 522
HRD+K N+LLD+N +++DFGL+ + D N
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 367 DGFADQNLLGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGER-EFKAEVEIISRIHHRH 424
D F + LG G G V K + P G +A K + + R + E++++ + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRV------KIAAGAARGL 478
+V G SD + +++ +L VL A R+ K++ RGL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSL--------DQVLKEAKRIPEEILGKVSIAVLRGL 127
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD--ANTHITTR 528
AYL E +I+HRD+K SNIL+++ E ++ DFG++ +D AN+ + TR
Sbjct: 128 AYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 177
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 375 LGEGGFGSVYK-GYLPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSLV 429
LG G FG V+ +GR A+K LK + Q E E ++S + H ++ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVTHPFIIRMW 72
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGR---PVLDWATRVKIAAGAARGLAYLHEDCH 486
G + +I DY+ L+ L R PV + AA L YLH
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY-----AAEVCLALEYLHSK-- 125
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
II+RD+K NILLD N +++DFG AK D +T + GT
Sbjct: 126 -DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGT 166
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 427 SLVGYCISDDRRLLIY------------------DYVPNNTLYFHLHGEGRPVLDWATRV 468
+L+G C L++ ++VP LY + L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY-------KDFLTLEHLI 147
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 148 CYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKAEVEIISRIH 421
++ F + +LG+G FG V K D R AIK+++ + +EV +++ ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 422 HRHLVSLVGYCISDDRRLLI---------------YDYVPNNTLYFHLHGEGRPVLD--- 463
H+++V Y +RR + +Y N TLY +H E
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
W ++ L+Y+H IIHRD+K NI +D + ++ DFGLAK
Sbjct: 119 W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGREVAIKQLKI----GGGQGEREFKAEVEIISRIHHRH 424
F +G+G FG V+KG D R + +KI + + E+ ++S+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
+ G + + +I +Y+ + L AT +K +GL YLH +
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSE 139
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGTF 533
+ IHRDIK++N+LL + +++DFG+A D T V F
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 185
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLK---IGGGQGEREFKAEVEIISRIH-HRHLVSLV 429
LG+G +G V+K G VA+K++ +R F+ E+ I++ + H ++V+L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 430 GYCISDDRR--LLIYDYVPNNTLYFHLHGEGRP-VLDWATRVKIAAGAARGLAYLHEDCH 486
+D+ R L++DY+ + LH R +L+ + + + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
++HRD+K SNILL+ +V+DFGL++
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G+G G+VY + G+EVAI+Q+ + + E+ ++ + ++V+ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
D ++ +Y+ +L + +D + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
IKS NILL + +++DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFC 163
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G+G G+VY + G+EVAI+Q+ + + E+ ++ + ++V+ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
D ++ +Y+ +L + +D + + L +LH + ++IHRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 142
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
IKS NILL + +++DFG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFC 164
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G+G G+VY + G+EVAI+Q+ + + E+ ++ + ++V+ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
D ++ +Y+ +L + +D + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
IKS NILL + +++DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFC 163
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
+ F+ ++G GGFG VY D G+ A+K L +I QGE ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------TLALNE 239
Query: 423 RHLVSLVG-------YCIS-----DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI 470
R ++SLV C+S D+ I D + L++HL G V A
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFY 297
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
AA GL ++H + +++RD+K +NILLD + ++SD GLA
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
+ F+ ++G GGFG VY D G+ A+K L +I QGE ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------TLALNE 239
Query: 423 RHLVSLVG-------YCIS-----DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI 470
R ++SLV C+S D+ I D + L++HL G V A
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFY 297
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
AA GL ++H + +++RD+K +NILLD + ++SD GLA
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G+G G+VY + G+EVAI+Q+ + + E+ ++ + ++V+ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
D ++ +Y+ +L + +D + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
IKS NILL + +++DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFC 163
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGYLPDG-REVAIKQLK--IGGGQGEREFKAEVEIISR 419
V D + ++L+G G +G VY Y + + VAIK++ + E+ I++R
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR--------PVLDWATRVK-I 470
+ +++ L I DD LL +D LY L P+ +K I
Sbjct: 82 LKSDYIIRLYDLIIPDD--LLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTI 134
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
G ++HE IIHRD+K +N LL+ + +V DFGLA+
Sbjct: 135 LYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 373 NLLGEGGFGSVY---KGYLPDGREV-AIKQLKIGGGQGEREFKAEVE--IISRIHHRHLV 426
+LG+G FG V+ K D R++ A+K LK + + ++E I+ ++H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLAYLHEDC 485
L ++ + LI D++ L+ L E V+ VK A A L +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG 146
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
II+RD+K NILLD +++DFGL+K ++D
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 391 GREVAIKQLKIGGGQGEREFKAEVEIISRIH---------HRHLVSLVGYCISDDRRLLI 441
G E A+K +++ + E EV +R H H+++L+ S L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 442 YDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILL 501
+D + L+ +L E + + TR I +++LH + I+HRD+K NILL
Sbjct: 179 FDLMRKGELFDYL-TEKVALSEKETR-SIMRSLLEAVSFLHAN---NIVHRDLKPENILL 233
Query: 502 DNNFEAQVSDFGLA 515
D+N + ++SDFG +
Sbjct: 234 DDNMQIRLSDFGFS 247
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
+ F+ ++G GGFG VY D G+ A+K L +I QGE ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------TLALNE 239
Query: 423 RHLVSLVG-------YCIS-----DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI 470
R ++SLV C+S D+ I D + L++HL G V A
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFY 297
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
AA GL ++H + +++RD+K +NILLD + ++SD GLA
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
+ F+ ++G GGFG VY D G+ A+K L +I QGE ++
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------TLALNE 238
Query: 423 RHLVSLVG-------YCIS-----DDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI 470
R ++SLV C+S D+ I D + L++HL G V A
Sbjct: 239 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFY 296
Query: 471 AAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
AA GL ++H + +++RD+K +NILLD + ++SD GLA
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR-------------VKIAA 472
+L+G C L+ I ++ L +L + + + T + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 369 FADQNLLGEGGFGSVY---KGYLPDGREV-AIKQLKIGGGQGEREFKAEVE--IISRIHH 422
F +LG+G FG V+ K D R++ A+K LK + + ++E I+ ++H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLAYL 481
+V L ++ + LI D++ L+ L E V+ VK A A L +L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHL 142
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
H II+RD+K NILLD +++DFGL+K ++D
Sbjct: 143 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+ ++++ A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 23/161 (14%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKA--EVEIISRIHHR 423
+ F +GEG +G VYK G VA+ ++++ A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR------- 476
++V L+ ++++ L++++ LH + + +D + I +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 477 -GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GLA+ H R++HRD+K N+L++ +++DFGLA+
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 367 DGFADQNLLGEGGFGSVY-----KGYLPDGREVAIKQLK----IGGGQGEREFKAEVEII 417
+ F +LG G +G V+ G+ G+ A+K LK + + + E +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 418 SRIHHRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGA-A 475
I + + Y + +L LI DY+ L+ HL R V+I G
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIV 169
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
L +LH+ II+RDIK NILLD+N ++DFGL+K
Sbjct: 170 LALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 369 FADQNLLGEGGFGSVY---KGYLPDGREV-AIKQLKIGGGQGEREFKAEVE--IISRIHH 422
F +LG+G FG V+ K D R++ A+K LK + + ++E I+ ++H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGAARGLAYL 481
+V L ++ + LI D++ L+ L E V+ VK A A L +L
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHL 143
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
H II+RD+K NILLD +++DFGL+K ++D
Sbjct: 144 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 179
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 375 LGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+GEG G V G++VA+K++ + Q EV I+ HH ++V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK--------IAAGAARGLAYLHEDC 485
D ++ +++ EG + D T + + R L+YLH
Sbjct: 113 VGDELWVVMEFL-----------EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG 161
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRDIKS +ILL ++ ++SDFG
Sbjct: 162 ---VIHRDIKSDSILLTSDGRIKLSDFGFC 188
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHSR---D 125
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 369 FADQNLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRH 424
F LLG+G FG V GR A+K LK + E E ++ H
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHED 484
L +L + DR + +Y L+FHL E D A A L YLH +
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--GAEIVSALDYLHSE 127
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RD+K N++LD + +++DFGL K
Sbjct: 128 --KNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHSR---D 125
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K LK + E E ++ H L +L
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E D A A L YLH +
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--GAEIVSALDYLHSE--KN 131
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RD+K N++LD + +++DFGL K
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Query: 343 SPQDPGGLGHSRSMFTYEELVKATDGFADQNLLGEGGFGSV-YKGYLPDGREVAIKQLKI 401
SP D G + + F LLG+G FG V GR A+K LK
Sbjct: 127 SPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK 186
Query: 402 GGGQGEREFK---AEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEG 458
+ E E ++ H L +L + DR + +Y L+FHL E
Sbjct: 187 EVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER 246
Query: 459 RPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
D A A L YLH + +++RD+K N++LD + +++DFGL K
Sbjct: 247 VFSEDRARFY--GAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K LK + E E ++ H L +L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E D A A L YLH +
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--GAEIVSALDYLHSE--KN 130
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RD+K N++LD + +++DFGL K
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKAEVEIISRIH 421
++ F + +LG+G FG V K D R AIK+++ + +EV +++ ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLN 60
Query: 422 HRHLVSLVGYCISDDRRLLI---------------YDYVPNNTLYFHLHGEGRPVLD--- 463
H+++V Y +RR + +Y N TLY +H E
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 464 WATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
W ++ L+Y+H IIHR++K NI +D + ++ DFGLAK
Sbjct: 119 W----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHSR---D 128
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGER---EFKAEVEIISRIH 421
+D + +LG GG V+ L R+VA+K L+ + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 422 HRHLVSLVGYCISDDRR----LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
H +V++ ++ ++ +YV TL +H EG A +++ A A +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQA 128
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHI--TTRVMGT 532
L + H++ IIHRD+K +NI++ +V DFG+A+ D+ + T V+GT
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHSR---D 125
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKA--EVE 415
YE+L K +G+G FG V+K + G++VA+K++ + + A E++
Sbjct: 20 YEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRL--------LIYDYVPNNTLYFHLHGEGRPVLDWATR 467
I+ + H ++V+L+ C + L++D+ ++ + + L R
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 468 VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
V GL Y+H + +I+HRD+K++N+L+ + +++DFGLA+
Sbjct: 130 V--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 359 YEELVKATDGFADQNLLGE-GGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-FKAEVEI 416
YE + + + ++GE G FG VYK + +A ++ + E E + E++I
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 417 ISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR 476
++ H ++V L+ ++ ++ ++ + + RP+ + +V +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLD 119
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTR 528
L YLH++ +IIHRD+K+ NIL + + +++DFG++ A + T I R
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTXIQRR 166
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHSR---D 125
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR------------VKIAAG 473
+L+G C L+ I ++ L +L + + + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHS---RD 130
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKA--EVE 415
YE+L K +G+G FG V+K + G++VA+K++ + + A E++
Sbjct: 19 YEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK 68
Query: 416 IISRIHHRHLVSLVGYCISDDRRL--------LIYDYVPNNTLYFHLHGEGRPVLDWATR 467
I+ + H ++V+L+ C + L++D+ ++ + + L R
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 468 VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
V GL Y+H + +I+HRD+K++N+L+ + +++DFGLA+
Sbjct: 129 V--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKA--EVE 415
YE+L K +G+G FG V+K + G++VA+K++ + + A E++
Sbjct: 20 YEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRL--------LIYDYVPNNTLYFHLHGEGRPVLDWATR 467
I+ + H ++V+L+ C + L++D+ ++ + + L R
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 468 VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
V GL Y+H + +I+HRD+K++N+L+ + +++DFGLA+
Sbjct: 130 V--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 373 NLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHHRHLVSL 428
LLG+G FG V GR A+K L+ + E E ++ H L +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR 488
+ DR + +Y L+FHL E R + R A L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARF-YGAEIVSALEYLHS---RD 125
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+++RDIK N++LD + +++DFGL K
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREFKA--EVE 415
YE+L K +G+G FG V+K + G++VA+K++ + + A E++
Sbjct: 20 YEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK 69
Query: 416 IISRIHHRHLVSLVGYCISDDRRL--------LIYDYVPNNTLYFHLHGEGRPVLDWATR 467
I+ + H ++V+L+ C + L++D+ ++ + + L R
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 468 VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
V GL Y+H + +I+HRD+K++N+L+ + +++DFGLA+
Sbjct: 130 V--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G+G G+VY + G+EVAI+Q+ + + E+ ++ + ++V+ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
D ++ +Y+ +L + +D + + L +LH + ++IHR+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRN 142
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
IKS NILL + +++DFG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFC 164
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGER---EFKAEVEIISRIH 421
+D + +LG GG V+ L R+VA+K L+ + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 422 HRHLVSL--VGYCISDDRRL--LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
H +V++ G + L ++ +YV TL +H EG A +++ A A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQA 128
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHI--TTRVMGT 532
L + H++ IIHRD+K +NI++ +V DFG+A+ D+ + T V+GT
Sbjct: 129 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 357 FTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGE-REFKAEV 414
FT E+L D +G G +GSV K + P G+ +A+K+++ + E ++ ++
Sbjct: 19 FTAEDL-------KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 415 EIISRIHH-RHLVSLVGYCISDDRRLLIYDYVPN--NTLYFHLHGEGRPVLDWATRVKIA 471
+++ R ++V G + + + + + Y +++ V+ KI
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDA 521
+ L +L E+ +IIHRDIK SNILLD + ++ DFG++ +D+
Sbjct: 132 LATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGER---EFKAEVEIISRIH 421
+D + +LG GG V+ L R+VA+K L+ + F+ E + + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 422 HRHLVSLVGYCISDDRR----LLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
H +V++ ++ ++ +YV TL +H EG A +++ A A +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIADACQA 145
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHI--TTRVMGT 532
L + H++ IIHRD+K +NI++ +V DFG+A+ D+ + T V+GT
Sbjct: 146 LNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 375 LGEGGFGSVYKGYLPD--------GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
LG+G F ++KG + EV +K L F ++S++ H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C+ D +L+ ++V +L +L + + ++ ++++A A + +L E+
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEEN-- 132
Query: 487 PRIIHRDIKSSNILL 501
+IH ++ + NILL
Sbjct: 133 -TLIHGNVCAKNILL 146
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
LG G FG V++ GR K + + K E+ I++++HH L++L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+LI +++ L+ + E + + A + A GL ++HE I+H D
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSE-AEVINYMRQACEGLKHMHEHS---IVHLD 174
Query: 494 IKSSNILLDNNFEAQVS--DFGLA-KLALDANTHITT 527
IK NI+ + + V DFGLA KL D +TT
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 366 TDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQ--GEREFKAEVEIISRIHH 422
+ F ++LLGEG +G V + P G VAIK+++ R + E++I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK-IAAGAARGLAYL 481
+++++ D Y+ + LH + ++ R + L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H +IHRD+K SN+L+++N + +V DFGLA++
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G + R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP 70
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 123
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD 180
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 181 FGLARHTDDEMTGYVATR 198
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 366 TDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQ--GEREFKAEVEIISRIHH 422
+ F ++LLGEG +G V + P G VAIK+++ R + E++I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK-IAAGAARGLAYL 481
+++++ D Y+ + LH + ++ R + L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H +IHRD+K SN+L+++N + +V DFGLA++
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 366 TDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQ--GEREFKAEVEIISRIHH 422
+ F ++LLGEG +G V + P G VAIK+++ R + E++I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK-IAAGAARGLAYL 481
+++++ D Y+ + LH + ++ R + L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
H +IHRD+K SN+L+++N + +V DFGLA++
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G + R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 113
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD 170
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 171 FGLARHTDDEMTGYVATR 188
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 426 VSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK------IAAGAARGLA 479
+ I+D R + + + L HL G L + RGL
Sbjct: 104 IG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
Y+H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 159 YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 194
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G + R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 70
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 123
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD 180
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 181 FGLARHTDDEMTGYVATR 198
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G + R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 70
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 123
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD 180
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 181 FGLARHTDDEMTGYVATR 198
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 32/182 (17%)
Query: 374 LLGEGGFGSVYK----GYLPDGR--EVAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHL 425
+LG G FG V G G +VA+K LK ERE +E+++++++ H ++
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 426 VSLVGYCISDDRRLLIYDYVPNNTLYFHLHG---------------------EGRPVLDW 464
V+L+G C LI++Y L +L E VL +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 465 ATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
+ A A+G+ +L +HRD+ + N+L+ + ++ DFGLA+ + + +
Sbjct: 172 EDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 525 IT 526
+
Sbjct: 229 VV 230
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREVAI-----KQLKIGGGQGEREFKAEVEIISRIH 421
D F +G+G FG V D +++ KQ + + FK E++I+ +
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLE 73
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
H LV+L Y D+ + ++ D + L +HL T L Y
Sbjct: 74 HPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDY 130
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
L + RIIHRD+K NILLD + ++DF +A + L T ITT
Sbjct: 131 LQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-LPRETQITT 173
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEG--------------RPVLDWATRVKIA 471
+L+G C L+ I ++ L +L + + L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G + R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 113
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILD 170
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 171 FGLARHTDDEMTGYVATR 188
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 27/197 (13%)
Query: 349 GLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGG 403
G+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 404 G---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP 460
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 71 QSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGAD 123
Query: 461 VLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDF 512
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DF
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 180
Query: 513 GLAKLALDANT-HITTR 528
GLA+ D T ++ TR
Sbjct: 181 GLARHTDDEMTGYVATR 197
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 27/197 (13%)
Query: 349 GLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGG 403
G+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 404 G---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRP 460
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 71 QSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGAD 123
Query: 461 VLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDF 512
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DF
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDF 180
Query: 513 GLAKLALDANT-HITTR 528
GLA+ D T ++ TR
Sbjct: 181 GLARHTDDEMTGYVATR 197
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 427 SLVGYCISDDRRLL-IYDYVPNNTLYFHLHGEGRPVLDWATR--------------VKIA 471
+L+G C L+ I ++ L +L + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEII 417
+E++ K T LLGEG + V L +G+E A+K ++ G EVE +
Sbjct: 10 FEDMYKLTS-----ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL 64
Query: 418 SRIH-HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAAR 476
+ +++++ L+ + D R L+++ + ++ H+ + A+RV AA
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA- 123
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAK-LAL-DANTHITTRVMG 531
L +LH I HRD+K NIL ++ + ++ DF L + L ++ T ITT +
Sbjct: 124 -LDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 532 T 532
T
Sbjct: 180 T 180
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G + R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 GPMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 113
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD 170
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 171 FGLARHTDDEMTGYVATR 188
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 375 LGEGGFGSVYKGYLPD--------GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
LG+G F ++KG + EV +K L F ++S++ H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
G C D +L+ ++V +L +L + + ++ ++++A A + +L E+
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAWAMHFLEEN-- 132
Query: 487 PRIIHRDIKSSNILL 501
+IH ++ + NILL
Sbjct: 133 -TLIHGNVCAKNILL 146
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 47/202 (23%)
Query: 335 GPGSDFVNSPQDPGG-LGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVY--KGYLPDG 391
GPGS + PG + HS ++F+ D + Q +LG+G FG V K + G
Sbjct: 1 GPGSMMDHLHATPGMFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKIT-G 51
Query: 392 REVAIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNN 448
+E A+K + ++ + EV+++ ++ H +++ L Y++ +
Sbjct: 52 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDK 98
Query: 449 TLYFHLHGE------------GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKS 496
YF+L GE R +I G+ Y+H++ +I+HRD+K
Sbjct: 99 G-YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 154
Query: 497 SNILLDN---NFEAQVSDFGLA 515
N+LL++ + ++ DFGL+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLS 176
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 367 DGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGG--------QGEREFK-AEVEI 416
+ + + +LG G V + + P +E A+K + + GG Q RE EV+I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 417 ISRIH-HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAA 475
+ ++ H +++ L ++ L++D + L+ +L E + + TR KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETR-KIMRALL 121
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ LH+ I+HRD+K NILLD++ +++DFG +
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 367 DGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGG--------QGEREFK-AEVEI 416
+ + + +LG G V + + P +E A+K + + GG Q RE EV+I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 417 ISRIH-HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAA 475
+ ++ H +++ L ++ L++D + L+ +L E + + TR KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETR-KIMRALL 134
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ LH+ I+HRD+K NILLD++ +++DFG +
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 354 RSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG---Q 405
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 RPTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH 60
Query: 406 GEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA 465
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 61 AKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNIV 113
Query: 466 TRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 518 ALDANT-HITTR 528
D T ++ TR
Sbjct: 171 TDDEMTGYVATR 182
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 367 DGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGG--------QGEREFK-AEVEI 416
+ + + +LG G V + + P +E A+K + + GG Q RE EV+I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 417 ISRIH-HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAA 475
+ ++ H +++ L ++ L++D + L+ +L E + + TR KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETR-KIMRALL 134
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+ LH+ I+HRD+K NILLD++ +++DFG +
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + VA+K LK ERE +E++++S + +H ++V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI---------------- 470
+L+G C L+I +Y L L + + T I
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 471 AAGAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+A+L ++C IHRD+ + NILL + ++ DFGLA+
Sbjct: 151 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 369 FADQNLLGEGGFGSVY--KGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLV 426
F +LG G F V+ K L G+ A+K +K + + E+ ++ +I H ++V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
+L S L+ V L+ + G A+ V + YLHE+
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV--IQQVLSAVKYLHEN-- 125
Query: 487 PRIIHRDIKSSNILL---DNNFEAQVSDFGLAKL 517
I+HRD+K N+L + N + ++DFGL+K+
Sbjct: 126 -GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + VA+K LK ERE +E++++S + +H ++V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI---------------- 470
+L+G C L+I +Y L L + + T I
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 471 AAGAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+A+L ++C IHRD+ + NILL + ++ DFGLA+
Sbjct: 167 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 369 FADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVS 427
+ D LG GG G V+ D + VAIK++ + Q + E++II R+ H ++V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 428 LV------GYCISDD--------RRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAG 473
+ G ++DD ++ +Y+ + G P+L+ R+
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARL-FMYQ 128
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDN-NFEAQVSDFGLAKL 517
RGL Y+H ++HRD+K +N+ ++ + ++ DFGLA++
Sbjct: 129 LLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + VA+K LK ERE +E++++S + +H ++V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI---------------- 470
+L+G C L+I +Y L L + + T I
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 471 AAGAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+A+L ++C IHRD+ + NILL + ++ DFGLA+
Sbjct: 169 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQLKIGGGQGEREFKA---EVEIIS 418
VK TD F +LG+G FG V E+ AIK LK + + + E +++
Sbjct: 16 VKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 419 RIHHRHLVSLVGYCISD-DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+ ++ + C DR + +YV L +H+ G+ V AA + G
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIG 132
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
L +LH+ II+RD+K N++LD+ +++DFG+ K
Sbjct: 133 LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + VA+K LK ERE +E++++S + +H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI---------------- 470
+L+G C L+I +Y L L + + T I
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 471 AAGAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+A+L ++C IHRD+ + NILL + ++ DFGLA+
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGERE-FKAEVEIISRI-HHRHLV 426
LG G FG V + VA+K LK ERE +E++++S + +H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKI---------------- 470
+L+G C L+I +Y L L + + T I
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 471 AAGAARGLAYL-HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
+ A+G+A+L ++C IHRD+ + NILL + ++ DFGLA+
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 81 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 133
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 191 LARHTDDEMTGYVATR 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 79
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 80 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 132
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 133 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 190 LARHTDDEMTGYVATR 205
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 365 ATDGFADQNLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREFKA--EVEIISRIH 421
+ D + LGEG +G VYK E VAIK++++ + A EV ++ +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
HR+++ L + R LI++Y N+ + + P + G+ +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEND---LKKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQ-----VSDFGLAK 516
H R +HRD+K N+LL + ++ + DFGLA+
Sbjct: 149 HSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 158
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 353 SRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG--- 404
SR F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 2 SRPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 61
Query: 405 QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW 464
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 62 HAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNI 114
Query: 465 ATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 115 VKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
Query: 517 LALDANT-HITTR 528
D T ++ TR
Sbjct: 172 HTDDEMTGYVATR 184
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 373 NLLGEGGFGSVYKGYLPD-GREVAIKQLKIGG-----GQGEREFKAEVEIISRIHHRHLV 426
++G+G F V + + G++ A+K + + G + K E I + H H+V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHL--HGEGRPVLDWATRVKIAAGAARGLAYLHED 484
L+ SD ++++++ L F + + V A L Y H++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 485 CHPRIIHRDIKSSNILL---DNNFEAQVSDFGLA 515
IIHRD+K N+LL +N+ ++ DFG+A
Sbjct: 150 ---NIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 87 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 143
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 158
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 80
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 81 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 133
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 191 LARHTDDEMTGYVATR 206
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 348 GGLGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIG 402
G R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 GSHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 403 GG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR 459
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGA 113
Query: 460 PVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSD 511
+ + K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILD 170
Query: 512 FGLAKLALDANT-HITTR 528
FGLA+ D T ++ TR
Sbjct: 171 FGLARHTDDEMTGYVATR 188
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 158
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 84 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 136
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 137 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 193
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 194 LARHTDDEMTGYVATR 209
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YVP ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 69 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 121
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 179 ARHTADEMTGYVATR 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 79
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 80 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 132
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 133 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 190 LARHTDDEMTGYVATR 205
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 69 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 121
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 179 ARHTADEMTGYVATR 193
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 375 LGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKA----EVEIISRIHHRHLVSLV 429
+GEG +G V+K D G+ VAIK K + + K E+ ++ ++ H +LV+L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIK--KFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE-DCHPR 488
R L+++Y ++T+ L R V + + I + + + H+ +C
Sbjct: 69 EVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVK-SITWQTLQAVNFCHKHNC--- 123
Query: 489 IIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
IHRD+K NIL+ + ++ DFG A+L
Sbjct: 124 -IHRDVKPENILITKHSVIKLCDFGFARL 151
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L Y D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 66 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 118
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 175
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 176 LARHTDDEMTGYVATR 191
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L Y D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 69 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 121
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 179 ARHTADEMTGYVATR 193
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENV 103
Query: 426 VS----LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ L + R + I + LY L + L RGL Y+
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRGLKYI 160
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTH 524
H ++HRD+K SN+L++ + ++ DFGLA++A + H
Sbjct: 161 HS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 67 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 119
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 177 LARHTDDEMTGYVATR 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L Y D+ L ++ +YVP ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 160
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 161 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 194
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 141 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 174
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 85
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 143 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 176
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 26/114 (22%)
Query: 413 EVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNT---LYFHLHGEGRPVLDWATRVK 469
E+ I+ ++ H ++V LV + DD PN + F L +G PV++ T
Sbjct: 86 EIAILKKLDHPNVVKLVE--VLDD---------PNEDHLYMVFELVNQG-PVMEVPTLKP 133
Query: 470 IAAGAAR--------GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
++ AR G+ YLH + +IIHRDIK SN+L+ + +++DFG++
Sbjct: 134 LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 141 HS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 141 HS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 375 LGEGGFGSVYK-GYLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRIHH-RHLVSLVGY 431
+G G G V+K + G +A+KQ++ G + E + +++++ + H ++V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRV--KIAAGAARGLAYLHEDCHPRI 489
I++ + + + +G P+ + R+ K+ + L YL E +
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQG-PIPE---RILGKMTVAIVKALYYLKE--KHGV 146
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
IHRD+K SNILLD + ++ DFG++ +D
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVD 177
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHH 422
D F LG G FG V ++ G A+K L +E + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +Y P ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+++D QV+DFGLAK
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQLKIGGGQGEREFKA---EVEIIS-RIH 421
+ F +LG+G FG V+ + AIK LK + + + E ++S
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
H L + + + + +Y+ L +H+ + L AT AA GL +L
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFL 135
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAL--DANTH 524
H I++RD+K NILLD + +++DFG+ K + DA T+
Sbjct: 136 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 177
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 12 SQERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 71
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 72 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 124
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 125 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 181
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 182 ARHTDDEMTGYVATR 196
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 67 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 119
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL 176
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 177 ARHTDDEMTGYVATR 191
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 145 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 146 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 91
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 148
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 149 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 182
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 141 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 174
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRGLKYI 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 145 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 354 RSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG---Q 405
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH 60
Query: 406 GEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA 465
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 61 AKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNIV 113
Query: 466 TRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 518 ALDANT-HITTR 528
D T ++ TR
Sbjct: 171 TDDEMTGYVATR 182
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 139 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 172
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQLKIGGGQGEREFKA---EVEIIS-RIH 421
+ F +LG+G FG V+ + AIK LK + + + E ++S
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
H L + + + + +Y+ L +H+ + L AT AA GL +L
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFL 134
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAL--DANTH 524
H I++RD+K NILLD + +++DFG+ K + DA T+
Sbjct: 135 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 67 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 119
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFG 176
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 177 LARHTDDEMTGYVATR 192
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQ-LKIGGGQGE-REFKAEVEIISRIHHR 423
D + ++L+G G +G V + Y + R VAIK+ L++ + + E+ I++R++H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 424 HLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVK-IAAGAARGLAYL 481
H+V ++ I D YV R PV +K + G+ Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H I+HRD+K +N L++ + +V DFGLA+
Sbjct: 173 HS---AGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 146 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 89
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 146
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 147 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 180
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 80
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 137
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 138 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 171
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 145 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 141 HS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVA 174
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 145 HS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 139 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 172
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAIK++ Q +R + E++I+ R H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENI 87
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 145 HS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 8 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 67
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 68 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 120
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 178 ARHTDDEMTGYVATR 192
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 62 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 114
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 172 ARHTDDEMTGYVATR 186
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
RGL Y+H ++IHRD+K SN+L++ N E ++ DFG+A+
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 67 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 119
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGL 176
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 177 ARHTDDEMTGYVATR 191
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 67 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 119
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 176
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 177 ARHTDDEMTGYVATR 191
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 60
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 113
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 114 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 170
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 171 ARHTDDEMTGYVATR 185
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 347 PGGLGH-SRSMFTYEELVKAT----DGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQLK 400
P + H R F +EL K + + + +G G +GSV Y + G ++A+K+L
Sbjct: 26 PFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS 85
Query: 401 IGGG---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE 457
+R ++ E+ ++ + H +++ L+ + L + N +Y H
Sbjct: 86 RPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPATSLEEF-----NDVYLVTHLM 138
Query: 458 GRPVLDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQV 509
G + + K+ RGL Y+H IIHRD+K SN+ ++ + E ++
Sbjct: 139 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKI 195
Query: 510 SDFGLAKLALDANT-HITTR 528
DFGLA+ D T ++ TR
Sbjct: 196 LDFGLARHTDDEMTGYVATR 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 69 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 121
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 122 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 178
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 179 ARHTDDEMTGYVATR 193
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAK 516
LA+
Sbjct: 171 LAR 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAK 516
LA+
Sbjct: 171 LAR 173
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 81 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 133
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 514 LAK 516
LA+
Sbjct: 191 LAR 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 354 RSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG---Q 405
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH 60
Query: 406 GEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA 465
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 61 AKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNIV 113
Query: 466 TRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKL 517
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 518 ALDANT-HITTR 528
D T ++ TR
Sbjct: 171 TDDEMTGYVATR 182
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
RGL Y+H ++IHRD+K SN+L++ N E ++ DFG+A+
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 353 SRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG--- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 405 QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW 464
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 61 HAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNI 113
Query: 465 ATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
Query: 517 LALDANT-HITTR 528
D T ++ TR
Sbjct: 171 HTDDEMTGYVATR 183
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 94 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 150
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 514 LAKLALDANT 523
LA+ D T
Sbjct: 171 LARHTDDEMT 180
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 47/202 (23%)
Query: 335 GPGSDFVNSPQDPGG-LGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVY--KGYLPDG 391
GPGS + PG + HS ++F+ D + Q +LG+G FG V K + G
Sbjct: 1 GPGSXXDHLHATPGXFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKIT-G 51
Query: 392 REVAIK---QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNN 448
+E A+K + ++ + EV+++ ++ H ++ L Y++ +
Sbjct: 52 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL-------------YEFFEDK 98
Query: 449 TLYFHLHGE------------GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKS 496
YF+L GE R +I G+ Y H++ +I+HRD+K
Sbjct: 99 G-YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKP 154
Query: 497 SNILLDN---NFEAQVSDFGLA 515
N+LL++ + ++ DFGL+
Sbjct: 155 ENLLLESKSKDANIRIIDFGLS 176
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 47/192 (24%)
Query: 345 QDPGG-LGHSRSMFTYEELVKATDGFADQNLLGEGGFGSVY--KGYLPDGREVAIKQL-- 399
Q PG + HS ++F+ D + Q +LG+G FG V K + G+E A+K +
Sbjct: 17 QGPGMFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISK 67
Query: 400 -KIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE- 457
++ + EV+++ ++ H +++ L Y++ + YF+L GE
Sbjct: 68 RQVKQKTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDKG-YFYLVGEV 113
Query: 458 -----------GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDN--- 503
R +I G+ Y+H++ +I+HRD+K N+LL++
Sbjct: 114 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSK 170
Query: 504 NFEAQVSDFGLA 515
+ ++ DFGL+
Sbjct: 171 DANIRIIDFGLS 182
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 8 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 67
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 68 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 120
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 515 AKLALDANT-HITTR 528
A+ D T ++ TR
Sbjct: 178 ARHTDDEMTGYVATR 192
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 353 SRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG--- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 405 QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDW 464
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 61 HAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNI 113
Query: 465 ATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
Query: 517 LALDANT-HITTR 528
D T ++ TR
Sbjct: 171 HTDDEMTGYVATR 183
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D+G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I + ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGG-QGEREFKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RDIK N+LLD ++SDFGLA +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 39/190 (20%)
Query: 347 PGGLGHSR-SMFTYEELVKATDGFADQNLLGEGGFGSVY--KGYLPDGREVAIK---QLK 400
PG H+ MF +D + Q +LG+G FG V K + G+E A+K + +
Sbjct: 28 PGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQ 86
Query: 401 IGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE--- 457
+ + EV+++ ++ H +++ L Y++ + YF+L GE
Sbjct: 87 VKQKTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDKG-YFYLVGEVYT 132
Query: 458 ---------GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDN---NF 505
R +I G+ Y+H++ +I+HRD+K N+LL++ +
Sbjct: 133 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDA 189
Query: 506 EAQVSDFGLA 515
++ DFGL+
Sbjct: 190 NIRIIDFGLS 199
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGG-QGEREFKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RDIK N+LLD ++SDFGLA +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 39/190 (20%)
Query: 347 PGGLGHSR-SMFTYEELVKATDGFADQNLLGEGGFGSVY--KGYLPDGREVAIK---QLK 400
PG H+ MF +D + Q +LG+G FG V K + G+E A+K + +
Sbjct: 29 PGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQ 87
Query: 401 IGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE--- 457
+ + EV+++ ++ H +++ L Y++ + YF+L GE
Sbjct: 88 VKQKTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDKG-YFYLVGEVYT 133
Query: 458 ---------GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDN---NF 505
R +I G+ Y+H++ +I+HRD+K N+LL++ +
Sbjct: 134 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDA 190
Query: 506 EAQVSDFGLA 515
++ DFGL+
Sbjct: 191 NIRIIDFGLS 200
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 158
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 94 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 150
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 342 NSPQ-DPGGLGHSRSMFTYEELVKATD--GFADQNL-LGEGGFGSVYKGYL-PDGREVAI 396
+SPQ +P + H + + +V D + D + +GEG G V + G+ VA+
Sbjct: 2 SSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAV 61
Query: 397 KQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHG 456
K++ + Q EV I+ H ++V + + D ++ +++
Sbjct: 62 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL----------- 110
Query: 457 EGRPVLDWATRVK-----IAA---GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQ 508
EG + D T + IAA + L+ LH +IHRDIKS +ILL ++ +
Sbjct: 111 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 167
Query: 509 VSDFGLA 515
+SDFG
Sbjct: 168 LSDFGFC 174
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 369 FADQNLLGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQG--EREFKAEVEIISRIHHRHL 425
+ + + +GEG +G V Y + VAI+++ Q +R + E++I+ R H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 426 VSLVGY----CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
+ + I + + I + LY L + L RGL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 145 HS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YVP ++ HL GR A AA Y
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YVP ++ HL GR A AA Y
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 122 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 178
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RDIK N+LLD ++SDFGLA +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RDIK N+LLD ++SDFGLA +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLAKL 517
RDIK N+LLD ++SDFGLA +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 27/195 (13%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 62 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 114
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 115 NIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL 171
Query: 515 AKLALDANT-HITTR 528
+ D T ++ TR
Sbjct: 172 CRHTDDEMTGYVATR 186
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 375 LGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+GEG G V GR+VA+K + + Q EV I+ H ++V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRD 493
+ ++ +++ L + + R L+ + + LAYLH +IHRD
Sbjct: 113 VGEELWVLMEFLQGGALT-DIVSQVR--LNEEQIATVCEAVLQALAYLHAQG---VIHRD 166
Query: 494 IKSSNILLDNNFEAQVSDFGLA 515
IKS +ILL + ++SDFG
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFC 188
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
+H LV L ++ R + +YV L FH+ + R + + R +A + L Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARF-YSAEISLALNY 168
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAL 519
LHE II+RD+K N+LLD+ +++D+G+ K L
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQLKIGGGQGEREFK---AEVEIISRIHH 422
D F LG G FG V ++ G A+K L +E + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +Y P ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+++D +V+DFGLAK
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 126
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLA 150
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGG-QGEREFKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA 152
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 343 SPQ-DPGGLGHSRSMFTYEELVKATD--GFADQNL-LGEGGFGSVYKGYL-PDGREVAIK 397
SPQ +P + H + + +V D + D + +GEG G V + G+ VA+K
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVK 60
Query: 398 QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE 457
++ + Q EV I+ H ++V + + D ++ +++ E
Sbjct: 61 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL-----------E 109
Query: 458 GRPVLDWATRVK-----IAA---GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQV 509
G + D T + IAA + L+ LH +IHRDIKS +ILL ++ ++
Sbjct: 110 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKL 166
Query: 510 SDFGLA 515
SDFG
Sbjct: 167 SDFGFC 172
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 354 RSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG---Q 405
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH 60
Query: 406 GEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWA 465
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G + +
Sbjct: 61 AKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLNNIV 113
Query: 466 TRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG +G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
+H LV L ++ R + +YV L FH+ + R + + R +A + L Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARF-YSAEISLALNY 136
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAL 519
LHE II+RD+K N+LLD+ +++D+G+ K L
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 172
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
Query: 351 GHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG- 404
R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 25 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 84
Query: 405 --QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVL 462
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 85 IIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADLN 137
Query: 463 DWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGL 514
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DFGL
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 194
Query: 515 AK 516
A+
Sbjct: 195 AR 196
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 343 SPQ-DPGGLGHSRSMFTYEELVKATD--GFADQNL-LGEGGFGSVYKGYL-PDGREVAIK 397
SPQ +P + H + + +V D + D + +GEG G V + G+ VA+K
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVK 105
Query: 398 QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE 457
++ + Q EV I+ H ++V + + D ++ +++ E
Sbjct: 106 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL-----------E 154
Query: 458 GRPVLDWATRVK-----IAA---GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQV 509
G + D T + IAA + L+ LH +IHRDIKS +ILL ++ ++
Sbjct: 155 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKL 211
Query: 510 SDFGLA 515
SDFG
Sbjct: 212 SDFGFC 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 368 GFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKI---GGGQGEREFKAEVEIISRIHHR 423
F + +G G F VY+ L DG VA+K+++I + + E++++ +++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 424 HLVSLVGYCISDDRRLLIYDYVPN---NTLYFHLHGEGRPVLD---WATRVKIAAGAARG 477
+++ I D+ ++ + + + H + R + + W V++ +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA---- 148
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
L ++H R++HRDIK +N+ + ++ D GL + + T ++GT
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF-FSSKTTAAHSLVGT 199
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 375 LGEGGFGSVYK-GYLPDGREVAIKQLKIG-GGQGEREFKAEVEIISR-IHHRHLVSLVGY 431
LG G +G V K ++P G+ +A+K+++ Q ++ +++I R + V+ G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRV------KIAAGAARGLAYLHEDC 485
+ + + + + F+ + V+D + KIA + L +LH
Sbjct: 119 LFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDA 521
+IHRD+K SN+L++ + ++ DFG++ +D+
Sbjct: 174 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFY 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
+H LV L ++ R + +YV L FH+ + R + + R +A + L Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARF-YSAEISLALNY 125
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAL 519
LHE II+RD+K N+LLD+ +++D+G+ K L
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
+H LV L ++ R + +YV L FH+ + R + + R +A + L Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARF-YSAEISLALNY 121
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAL 519
LHE II+RD+K N+LLD+ +++D+G+ K L
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 157
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 375 LGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+GEG G V + G+ VA+K++ + Q EV I+ H ++V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK-----IAA---GAARGLAYLHEDC 485
D ++ +++ EG + D T + IAA + L+ LH
Sbjct: 92 VGDELWVVMEFL-----------EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRDIKS +ILL ++ ++SDFG
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFC 167
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F +G G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YVP ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D +V+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 375 LGEGGFGSVYKGYL-PDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+GEG G V + G+ VA+K++ + Q EV I+ H ++V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 434 SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK-----IAA---GAARGLAYLHEDC 485
D ++ +++ EG + D T + IAA + L+ LH
Sbjct: 88 VGDELWVVMEFL-----------EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
+IHRDIKS +ILL ++ ++SDFG
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFC 163
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 343 SPQ-DPGGLGHSRSMFTYEELVKATD--GFADQNL-LGEGGFGSVYKGYL-PDGREVAIK 397
SPQ +P + H + + +V D + D + +GEG G V + G+ VA+K
Sbjct: 123 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVK 182
Query: 398 QLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGE 457
++ + Q EV I+ H ++V + + D ++ +++ E
Sbjct: 183 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL-----------E 231
Query: 458 GRPVLDWATRVK-----IAA---GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQV 509
G + D T + IAA + L+ LH +IHRDIKS +ILL ++ ++
Sbjct: 232 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKL 288
Query: 510 SDFGLA 515
SDFG
Sbjct: 289 SDFGFC 294
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
RGL Y+H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 176
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 37/184 (20%)
Query: 368 GFADQNLLGEGGFGS-VYKGYLPDGREVAIKQ-LKIGGGQGEREFKAEVEIISRIHHRHL 425
F +++LG G G+ VY+G D R+VA+K+ L +RE + + R H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQ-----LLRESDEHP 78
Query: 426 VSLVGYCISDDRRL----------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAA 475
+ +C DR+ + +YV + HL E +L T
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKD-FAHLGLEPITLLQQTT--------- 128
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLD-----NNFEAQVSDFGLAKLALDANTHITTRVM 530
GLA+LH I+HRD+K NIL+ +A +SDFGL K L H +R
Sbjct: 129 SGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK-KLAVGRHSFSRRS 184
Query: 531 GTFG 534
G G
Sbjct: 185 GVPG 188
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
RGL Y+H ++HRD+K SN+LL+ + ++ DFGLA++A
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVA 176
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 19/174 (10%)
Query: 369 FADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLV 426
F LG GGFG V++ D AIK++++ + RE EV+ ++++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLH----------GEGRPVLDWATR---VKIAAG 473
+ + + P LY + GR ++ R + I
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITT 527
A + +LH ++HRD+K SNI + +V DFGL A+D + T
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVT-AMDQDEEEQT 176
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 375 LGEGGFGSV--YKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYC 432
LGEGGF V +G L DG A+K++ Q E + E ++ +H +++ LV YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 433 ISD----DRRLLIYDYVPNNTLYFHLH--GEGRPVLDWATRVKIAAGAARGLAYLHEDCH 486
+ + L+ + TL+ + + L + + G RGL +H +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY 155
Query: 487 PRIIHRDIKSSNILLDNNFEAQVSDFG 513
HRD+K +NILL + + + D G
Sbjct: 156 A---HRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIG-GGQGEREFKAEVEIISR-IHHRHLVSLVGY 431
LG G +G V K ++P G+ +A+K+++ Q ++ +++I R + V+ G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRV------KIAAGAARGLAYLHEDC 485
+ + + + + F+ + V+D + KIA + L +LH
Sbjct: 75 LFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+IHRD+K SN+L++ + ++ DFG++ +D
Sbjct: 130 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ FG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 436 DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIK 495
DR + +YV L +H+ GR V AA A GL +L II+RD+K
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLK 148
Query: 496 SSNILLDNNFEAQVSDFGLAK 516
N++LD+ +++DFG+ K
Sbjct: 149 LDNVMLDSEGHIKIADFGMCK 169
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D +V+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 436 DRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIK 495
DR + +YV L +H+ GR V AA A GL +L II+RD+K
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLK 469
Query: 496 SSNILLDNNFEAQVSDFGLAK 516
N++LD+ +++DFG+ K
Sbjct: 470 LDNVMLDSEGHIKIADFGMCK 490
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 372 QNLLGEGGFGSVYKGYLPDGRE---VAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLVS 427
+++LG G F V D R VAIK + +G E + E+ ++ +I H ++V+
Sbjct: 23 RDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L S LI V L+ + +G A+R+ A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 488 RIIHRDIKSSNIL---LDNNFEAQVSDFGLAKL 517
I+HRD+K N+L LD + + +SDFGL+K+
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANT-HITTR 528
RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+ A + T ++ TR
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR 184
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANT-HITTR 528
RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+ A + T ++ TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 372 QNLLGEGGFGSVYKGYLPDGRE---VAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLVS 427
+++LG G F V D R VAIK + +G E + E+ ++ +I H ++V+
Sbjct: 23 RDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L S LI V L+ + +G A+R+ A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 488 RIIHRDIKSSNIL---LDNNFEAQVSDFGLAKL 517
I+HRD+K N+L LD + + +SDFGL+K+
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D +V+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANT-HITTR 528
RGL Y+H IIHRD+K SN+ ++ + E ++ DFGLA+ A + T ++ TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGERE-FKAEVEIISRIHHRHLVSLVGYC 432
LGEG G V E VA+K + + E K E+ I ++H ++V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 433 ISDDRRLLIYDYVPNNTLYFHLHGE-GRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
+ + L +Y L+ + + G P D A R A G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 492 RDIKSSNILLDNNFEAQVSDFGLA 515
RDIK N+LLD ++SDFGLA
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 372 QNLLGEGGFGSVYKGYLPDGRE---VAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLVS 427
+++LG G F V D R VAIK + +G E + E+ ++ +I H ++V+
Sbjct: 23 RDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L S LI V L+ + +G A+R+ A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 488 RIIHRDIKSSNIL---LDNNFEAQVSDFGLAKL 517
I+HRD+K N+L LD + + +SDFGL+K+
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F +G G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +Y+P ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D +V+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 372 QNLLGEGGFGSVYKGYLPDGRE---VAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLVS 427
+++LG G F V D R VAIK + +G E + E+ ++ +I H ++V+
Sbjct: 23 RDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L S LI V L+ + +G A+R+ A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 488 RIIHRDIKSSNIL---LDNNFEAQVSDFGLAKL 517
I+HRD+K N+L LD + + +SDFGL+K+
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F +G G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +Y+P ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D +V+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 38/181 (20%)
Query: 375 LGEGGFGSVYK-GYLPDGREVAIKQLKIGG-GQGERE-FKAEVEIISRIHHRHLVSLVGY 431
+G G +G K DG+ + K+L G + E++ +EV ++ + H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 432 CISDDRRLLIYDYVPNNTLYFHL-HGEG-------------RPVLDWATRVKIAAGAARG 477
I DR N TLY + + EG R LD +++
Sbjct: 74 II--DR--------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 478 LAYLHEDCHPR------IIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
L ++CH R ++HRD+K +N+ LD ++ DFGLA++ L+ +T +G
Sbjct: 124 L----KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKTFVG 178
Query: 532 T 532
T
Sbjct: 179 T 179
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 350 LGHSRSMFTYEELVKATDGFAD--QNL--LGEGGFGSVYKGY-LPDGREVAIKQLKIGGG 404
+ R F +EL K + QNL +G G +GSV + G VA+K+L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 405 ---QGEREFKAEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPV 461
+R ++ E+ ++ + H +++ L+ + R L + N +Y H G +
Sbjct: 61 SIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEF-----NDVYLVTHLMGADL 113
Query: 462 LDWATRVKIAAGAA--------RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
+ K+ RGL Y+H IIHRD+K SN+ ++ + E ++ D G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGG 170
Query: 514 LAKLALDANT-HITTR 528
LA+ D T ++ TR
Sbjct: 171 LARHTDDEMTGYVATR 186
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 43/167 (25%)
Query: 373 NLLGEGGFGSVYKGYLPDGREVAIKQLKIGGG-------QGEREFKAEVEIISRIHHRHL 425
+LLGEG +G V + + D + + +KI GE K E++++ R+ H+++
Sbjct: 11 DLLGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 426 VSLVG---------------YCISDDRRLLIYDYVPNNTL-YFHLHGEGRPVLDWATRVK 469
+ LV YC+ + +L D VP HG ++D
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAHGYFCQLID------ 120
Query: 470 IAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
GL YLH I+H+DIK N+LL ++S G+A+
Sbjct: 121 -------GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFK------AEVEIISRI----HH 422
LLG+GGFG+V+ G+ L D +VAIK + G EV ++ ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 423 RHLVSLVGYCISDDRRLLIYDY-VPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
++ L+ + + + +L+ + +P L+ ++ +G P+ + +R A A
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVA---AIQ 153
Query: 482 HEDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALD 520
H CH R ++HRDIK NIL+D A++ DFG L D
Sbjct: 154 H--CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD 192
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 38/181 (20%)
Query: 375 LGEGGFGSVYK-GYLPDGREVAIKQLKIGG-GQGERE-FKAEVEIISRIHHRHLVSLVGY 431
+G G +G K DG+ + K+L G + E++ +EV ++ + H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 432 CISDDRRLLIYDYVPNNTLYFHL-HGEG-------------RPVLDWATRVKIAAGAARG 477
I DR N TLY + + EG R LD +++
Sbjct: 74 II--DR--------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 478 LAYLHEDCHPR------IIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
L ++CH R ++HRD+K +N+ LD ++ DFGLA++ L+ +T +G
Sbjct: 124 L----KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKAFVG 178
Query: 532 T 532
T
Sbjct: 179 T 179
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAIK + IG + + E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 126
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 120
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 121 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEY 177
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YV ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YV ++ HL GR A AA YL
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 157
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAIK + IG + + E+EI+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 132
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 133 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YV ++ HL GR A AA YL
Sbjct: 96 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEYL 152
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAIK + IG + + E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 126
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 120
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 121 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 177
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAIK + IG + + E+EI+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 125
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 126 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 165
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAIK + IG + + E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 126
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
L L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 101 FPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D +V+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V + G A+K L K+ + E I+ ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
LV L + D+ L ++ +YV ++ HL GR A AA YL
Sbjct: 88 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 144
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+L+D QV+DFG AK
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGE--REFKAEVEIISRIHHRHLVSLVG 430
+LG+G FG V K +E A+K + + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
++ + L+ + R A R I G+ Y+H+ I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKH---NIV 143
Query: 491 HRDIKSSNILLDN---NFEAQVSDFGLAKLALDANTHITTRV 529
HRD+K NILL++ + + ++ DFGL+ NT + R+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI 184
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 31/161 (19%)
Query: 375 LGEGGFGSVYKGYLPDGR-EVAIKQL---KIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+G G F +VYKG + EVA +L K+ + +R FK E E + + H ++V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR-FKEEAEXLKGLQHPNIVRFYD 92
Query: 431 ---------YCISDDRRLLIYDYVPNNTLYFHLH----GEGRPVLDWATRVKIAAGAARG 477
CI +L+ + + TL +L + + + W ++ +G
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKG 141
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDN-NFEAQVSDFGLAKL 517
L +LH P IIHRD+K NI + ++ D GLA L
Sbjct: 142 LQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGE--REFKAEVEIISRIHHRHLVSLVG 430
+LG+G FG V K +E A+K + + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
++ + L+ + R A R I G+ Y+H+ I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKH---NIV 143
Query: 491 HRDIKSSNILLDN---NFEAQVSDFGLAKLALDANTHITTRV 529
HRD+K NILL++ + + ++ DFGL+ NT + R+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI 184
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V ++ G A+K Q + Q E E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
L L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 101 FPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D +V+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQL---KIGGGQGEREFKAEVEIISRIHH 422
D F LG G FG V ++ G A+K L K+ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 423 RHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYL 481
L L + D+ L ++ +Y P ++ HL GR A AA YL
Sbjct: 102 PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEYL 158
Query: 482 HEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
H +I+RD+K N+++D +V+DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 375 LGEGGFGSVYKG-YLPDGREVAIKQLKIG-GGQGEREFKAEVEIISR-IHHRHLVSLVGY 431
LG G +G V K ++P G+ A+K+++ Q ++ +++I R + V+ G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRV------KIAAGAARGLAYLHEDC 485
+ + + + F+ + V+D + KIA + L +LH
Sbjct: 102 LFREGDVWICXELXDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 486 HPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALD 520
+IHRD+K SN+L++ + + DFG++ +D
Sbjct: 157 S--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGE--REFKAEVEIISRIHHRHLVSLVG 430
+LG+G FG V K +E A+K + + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
++ + L+ + R A R I G+ Y+H+ I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHK---HNIV 143
Query: 491 HRDIKSSNILLDN---NFEAQVSDFGLAKLALDANTHITTRV 529
HRD+K NILL++ + + ++ DFGL+ NT + R+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRI 184
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 372 QNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIH-HRHLVSLV 429
+++LGEG V L +E A+K ++ G EVE++ + HR+++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
+ +DR L+++ + ++ H+H R + + A L +LH + I
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLH---NKGI 132
Query: 490 IHRDIKSSNILLDNNFE---AQVSDFGL 514
HRD+K NIL ++ + ++ DFGL
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D +V+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 454 LHGEGRPVLDWATRVKIAAGAAR----GLAYLHEDCHPRIIHRDIKSSNILLDNN--FEA 507
+HG R LD+ R K+ + R L YLH + I HRDIK N L N FE
Sbjct: 154 IHG-FRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEI 209
Query: 508 QVSDFGLAK 516
++ DFGL+K
Sbjct: 210 KLVDFGLSK 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +YV ++ HL GR A AA Y
Sbjct: 100 FPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 156
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+++D QV+DFG AK
Sbjct: 157 LHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 38/181 (20%)
Query: 375 LGEGGFGSVYK-GYLPDGREVAIKQLKIGG-GQGERE-FKAEVEIISRIHHRHLVSLVGY 431
+G G +G K DG+ + K+L G + E++ +EV ++ + H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 432 CISDDRRLLIYDYVPNNTLYFHL-HGEG-------------RPVLDWATRVKIAAGAARG 477
I DR N TLY + + EG R LD +++
Sbjct: 74 II--DR--------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 478 LAYLHEDCHPR------IIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMG 531
L ++CH R ++HRD+K +N+ LD ++ DFGLA++ L+ + +G
Sbjct: 124 L----KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDEDFAKEFVG 178
Query: 532 T 532
T
Sbjct: 179 T 179
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGEREFKAEVEIISRIHH 422
K D F + + G+G FG+V G G VAIK++ RE + ++ ++ +HH
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHH 78
Query: 423 RHLVSLVGYCIS---DDRRLL----IYDYVPNNTLYFHLHGEGRPVLDWATRVKI-AAGA 474
++V L Y + DRR + + +YVP+ + R V +K+
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDN-NFEAQVSDFGLAK 516
R + LH + HRDIK N+L++ + ++ DFG AK
Sbjct: 139 IRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 369 FADQNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLV 426
F + LG G F V G+ A+K + +G E + E+ ++ +I H ++V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 427 SLVGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWATRVKIAAGAARGLAYLHEDC 485
+L S + L+ V L+ + +G D +T ++ A + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLH--- 137
Query: 486 HPRIIHRDIKSSNILL---DNNFEAQVSDFGLAKL 517
I+HRD+K N+L D + +SDFGL+K+
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 11/167 (6%)
Query: 355 SMFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIK--QLKIGGGQGEREFK 411
S F K +D + + LG+G F V + + G E A K K + ++ +
Sbjct: 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 412 AEVEIISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIA 471
E I ++ H ++V L + L++D V L+ + R A
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI 134
Query: 472 AGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLA 515
+AY H + I+HR++K N+LL + + +++DFGLA
Sbjct: 135 QQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 20 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 76
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 169
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAI+ + IG + + E+EI+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 251
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 252 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGY-LPDGREVAIK-----QLKIGGGQGER---EFKAEVEII 417
D + LG G G V + ++VAI+ + IG + + E+EI+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 418 SRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG 477
+++H ++ + + ++D +++ + + L+ + G R L AT
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLA 265
Query: 478 LAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLAKL 517
+ YLHE+ IIHRD+K N+LL + E +++DFG +K+
Sbjct: 266 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 305
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK------IGGGQGEREFKAEVEIISRIH--HRH 424
LLG GGFGSVY G + D VAIK ++ G EV ++ ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 425 LVSLVGYCISDDRRLLIYDYV-PNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++ L+ + D +LI + + P L+ + G A + ++A +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERG------ALQEELARSFFWQVLEAVR 128
Query: 484 DCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 65 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 121
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 182 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 375 LGEGGFGSVYKGYLPDGR-EVAIKQLKIGGGQGER-------------EFKAEVEIISRI 420
LG G +G V +G E AIK +K R E E+ ++ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 421 HHRHLVSLVGYCISDDRRL--LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL 478
H +++ L + + +D++ L+ ++ L+ + R D I G+
Sbjct: 104 DHPNIIKL--FDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGI 159
Query: 479 AYLHEDCHPRIIHRDIKSSNILLDNN---FEAQVSDFGLA 515
YLH+ I+HRDIK NILL+N ++ DFGL+
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGG-----GQGEREFKAEVEIISRI 420
D + ++G+G F V + + G++ A+K + + G + K E I +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHL--HGEGRPVLDWATRVKIAAGAARGL 478
H H+V L+ SD ++++++ L F + + V A L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 479 AYLHEDCHPRIIHRDIKSSNILL---DNNFEAQVSDFGLA 515
Y H++ IIHRD+K +LL +N+ ++ FG+A
Sbjct: 146 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGG-----GQGEREFKAEVEIISRI 420
D + ++G+G F V + + G++ A+K + + G + K E I +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHL--HGEGRPVLDWATRVKIAAGAARGL 478
H H+V L+ SD ++++++ L F + + V A L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 479 AYLHEDCHPRIIHRDIKSSNILL---DNNFEAQVSDFGLA 515
Y H++ IIHRD+K +LL +N+ ++ FG+A
Sbjct: 144 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 65 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 121
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 182 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIK----QLKIGGGQGEREFKAEVEIISRIH 421
D F LG G FG V + G A+K Q + Q E E I ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRIQQAVN 100
Query: 422 HRHLVSLVGYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAY 480
LV L + D+ L ++ +Y P ++ HL GR A AA Y
Sbjct: 101 FPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFEY 157
Query: 481 LHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
LH +I+RD+K N+L+D +V+DFG AK
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 63
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 28 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 28 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 375 LGEGGFGSVYKGYLP-DGREVA---IKQLKIGG---GQGEREFKAEVEIISRIHHRHLVS 427
LG G F V K G+E A IK+ ++ G E + EV I+ I H ++++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + +LI + V L+ L + D AT + G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLH---SK 134
Query: 488 RIIHRDIKSSNI-LLDNNF---EAQVSDFGLA 515
RI H D+K NI LLD N ++ DFG+A
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Query: 375 LGEGGFGSVYKGYLP-DGREVA---IKQLKIGG---GQGEREFKAEVEIISRIHHRHLVS 427
LG G F V K G+E A IK+ ++ G E + EV I+ I H ++++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + +LI + V L+ L + D AT + G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLH---SK 127
Query: 488 RIIHRDIKSSNI-LLDNNF---EAQVSDFGLA 515
RI H D+K NI LLD N ++ DFG+A
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 115
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 175
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 26 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 82
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 143 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 175
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 102
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 162
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 20 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 76
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 137 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 21 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 21 QNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++SL+ D Y+ + +L + LD + G+ +LH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 110
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 353 SRSMFTYEELVKAT----DGFADQNLLGEGGFGSVYKGYLPDGR---EVAIKQL------ 399
+RS F +E+ K + D +G G +G+V DGR +VAIK+L
Sbjct: 7 ARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQS 64
Query: 400 KIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDDRR------LLIYDYVPNNTLYFH 453
++ + RE + ++ + H +++ L+ D+ L+ ++ +
Sbjct: 65 ELFAKRAYRELR----LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM 120
Query: 454 LH---GEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVS 510
H GE R + +GL Y+H IIHRD+K N+ ++ + E ++
Sbjct: 121 KHEKLGEDRIQF-------LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKIL 170
Query: 511 DFGLAKLA 518
DFGLA+ A
Sbjct: 171 DFGLARQA 178
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 82
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 90
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 191
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 82
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAY----LH 482
V S RLL + P++ + E + + D+ T R + AR +
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 483 EDCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 110
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK------IGGGQGEREFKAEVEIISRIH--HRH 424
LLG GGFGSVY G + D VAIK ++ G EV ++ ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 425 LVSLVGYCISDDRRLLIYDYV-PNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++ L+ + D +LI + P L+ + G A + ++A +
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVR 128
Query: 484 DCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 372 QNLLGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIH-HRHLVSLV 429
+++LGEG V L +E A+K ++ G EVE++ + HR+++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
+ +DR L+++ + ++ H+H R + + A L +LH + I
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLH---NKGI 132
Query: 490 IHRDIKSSNILLDNNFE---AQVSDFGL 514
HRD+K NIL ++ + ++ DF L
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDL 160
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK------IGGGQGEREFKAEVEIISRIH--HRH 424
LLG GGFGSVY G + D VAIK ++ G EV ++ ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 425 LVSLVGYCISDDRRLLIYDY-VPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++ L+ + D +LI + P L+ + G A + ++A +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVR 124
Query: 484 DCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVVAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK------IGGGQGEREFKAEVEIISRIH--HRH 424
LLG GGFGSVY G + D VAIK ++ G EV ++ ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 425 LVSLVGYCISDDRRLLIYDY-VPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHE 483
++ L+ + D +LI + P L+ + G A + ++A +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVR 124
Query: 484 DCHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 375 LGEGGFGSVYKGYLP-DGREVAIKQLKIGG------GQGEREFKAEVEIISRIHHRHLVS 427
LG G F V K G+E A K +K G E + EV I+ I H ++++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 428 LVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHP 487
L + +LI + V L+ L + D AT + G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT--QFLKQILDGVHYLH---SK 148
Query: 488 RIIHRDIKSSNI-LLDNNF---EAQVSDFGLA 515
RI H D+K NI LLD N ++ DFG+A
Sbjct: 149 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 374 LLGEGGFGSVYKGY-LPDGREVAIKQLK----IGGGQGEREFKAEVEIISRIHHRHLVSL 428
LLG GGFGSVY G + D VAIK ++ G+ + +E++ L+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 66
Query: 429 VGYCISDDRRLLIYDYVPNNTLYFHLHGEG-RPVLDWAT-RVKIAAGAARGLAYLHED-- 484
V S RLL + P++ + E + + D+ T R + AR + +
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 485 --CHPR-IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
CH ++HRDIK NIL+D N E ++ DFG L D
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 167
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIK--QLKIGGGQGEREFKAEVEIISRIHH 422
TD + LG+G F V + +P G+E A K K + ++ + E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
++V L + L++D V L+ + A A A+ + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---------AREYYSEADASHCIQQIL 113
Query: 483 ED---CHPR-IIHRDIKSSNILLDNNFE---AQVSDFGLA 515
E CH I+HRD+K N+LL + + +++DFGLA
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQLK-IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
++LG+G +V++G + G AIK I + E E++ +++H+++V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL-- 72
Query: 431 YCISDD----RRLLIYDYVPNNTLYFHL----HGEGRPVLDWATRVKIAAGAARGLAYLH 482
+ I ++ ++LI ++ P +LY L + G P ++ ++ G G+ +L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLR 129
Query: 483 EDCHPRIIHRDIKSSNILL----DNNFEAQVSDFGLAK 516
E+ I+HR+IK NI+ D +++DFG A+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQL--KIGGGQGEREFKAEVEIISRIHH 422
TD + LG+G F V + +P G+E A K + K + ++ + E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
++V L + L++D V L+ + A A A+ + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---------AREYYSEADASHCIQQIL 113
Query: 483 ED---CHPR-IIHRDIKSSNILLDNNFE---AQVSDFGLA 515
E CH I+HRD+K N+LL + + +++DFGLA
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 374 LLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE----FKAEVEIISRIHHRHLVSLV 429
++G G FG V R+V +L +R F E +I++ + +V L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 430 GYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWA----TRVKIAAGAARGLAYLHED 484
Y DDR L ++ +Y+P L + P WA V +A A + +
Sbjct: 141 -YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLALDAIHSMGF---- 194
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
IHRD+K N+LLD + +++DFG
Sbjct: 195 -----IHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 373 NLLGEGGFGSVYKG-YLPDGREVAIKQLK-IGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
++LG+G +V++G + G AIK I + E E++ +++H+++V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL-- 72
Query: 431 YCISDD----RRLLIYDYVPNNTLYFHL----HGEGRPVLDWATRVKIAAGAARGLAYLH 482
+ I ++ ++LI ++ P +LY L + G P ++ ++ G G+ +L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLR 129
Query: 483 EDCHPRIIHRDIKSSNILL----DNNFEAQVSDFGLAK 516
E+ I+HR+IK NI+ D +++DFG A+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIK--QLKIGGGQGEREFKAEVEIISR 419
K +D + + LG+G F V + + G E A K K + ++ + E I +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLA 479
+ H ++V L + L++D V L+ + R A +A
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESIA 119
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLA 515
Y H + I+HR++K N+LL + + +++DFGLA
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 374 LLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE----FKAEVEIISRIHHRHLVSLV 429
++G G FG V R+V +L +R F E +I++ + +V L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 430 GYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWA----TRVKIAAGAARGLAYLHED 484
Y DDR L ++ +Y+P L + P WA V +A A + +
Sbjct: 141 -YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLALDAIHSMGF---- 194
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
IHRD+K N+LLD + +++DFG
Sbjct: 195 -----IHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 31/168 (18%)
Query: 366 TDGFADQNLLGEGGFGSVYKGYLPD-GREVAIKQLKIGGGQGER--------EFKAEVEI 416
+ ++ + LG G FG V+ + +EV +K +K + + E+ I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 417 ISRIHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEG---------RPVLDWATR 467
+SR+ H +++ ++ I++ L HG G P LD
Sbjct: 83 LSRVEHANIIKVLD----------IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA 132
Query: 468 VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA 515
I + YL IIHRDIK NI++ +F ++ DFG A
Sbjct: 133 SYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 374 LLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE----FKAEVEIISRIHHRHLVSLV 429
++G G FG V R+V +L +R F E +I++ + +V L
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 430 GYCISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWA----TRVKIAAGAARGLAYLHED 484
Y DDR L ++ +Y+P L + P WA V +A A + +
Sbjct: 136 -YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLALDAIHSMGF---- 189
Query: 485 CHPRIIHRDIKSSNILLDNNFEAQVSDFG 513
IHRD+K N+LLD + +++DFG
Sbjct: 190 -----IHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIK--QLKIGGGQGEREFKAEVEIISR 419
K +D + + LG+G F V + + G E A K K + ++ + E I +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLA 479
+ H ++V L + L++D V L+ + R A +A
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESIA 119
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLA 515
Y H + I+HR++K N+LL + + +++DFGLA
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 363 VKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIK--QLKIGGGQGEREFKAEVEIISR 419
K +D + + LG+G F V + + G E A K K + ++ + E I +
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 420 IHHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLA 479
+ H ++V L + L++D V L+ + R A +A
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESIA 118
Query: 480 YLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLA 515
Y H + I+HR++K N+LL + + +++DFGLA
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
ARG+ +L + IHRD+ + NILL N ++ DFGLA+
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLAR 247
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 375 LGEGGFGSVYKGYL------PDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + P R VA+K LK G E + E++I++ I HH ++V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 427 SLVGYC 432
+L+G C
Sbjct: 95 NLLGAC 100
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 29 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 85
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 146 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 178
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 28 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 32 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 88
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 149 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 181
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 21 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 366 TDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRH 424
+D F ++ LG G VY+ + A+K LK ++ + E+ ++ R+ H +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPN 109
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGR-PVLDWATRVKIAAGAARGLAYLHE 483
++ L + L+ + V L+ + +G D A VK A +AYLHE
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEA---VAYLHE 166
Query: 484 DCHPRIIHRDIKSSNILLDN---NFEAQVSDFGLAKL 517
+ I+HRD+K N+L + +++DFGL+K+
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 366 TDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLK--IGGGQGEREFKAEVEIISRI-H 421
T F + +G G FGSV+K DG AIK+ K + G E+ EV + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIA---AGAARGL 478
H H+V DD L+ +Y +L + E ++ + ++ RGL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 479 AYLHEDCHPRIIHRDIKSSNILL 501
Y+H ++H DIK SNI +
Sbjct: 129 RYIHS---MSLVHMDIKPSNIFI 148
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNN 504
KI +GL YLH C RIIH DIK NILL N
Sbjct: 150 KIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 469 KIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNN 504
KI +GL YLH C RIIH DIK NILL N
Sbjct: 134 KIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 167
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 372 QNL--LGEGGFGSVYKGYLPDG---REVAIKQLK---IGGGQGEREFKAEVEIISRIHHR 423
QNL +G G G V Y D R VAIK+L +R ++ E+ ++ ++H+
Sbjct: 27 QNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 424 HLVSLVGYCISDDRRLLIYD-YVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLH 482
+++ L+ D Y+ + +L + LD + G+ +LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 483 EDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 366 TDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLK--IGGGQGEREFKAEVEIISRI-H 421
T F + +G G FGSV+K DG AIK+ K + G E+ EV + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIA---AGAARGL 478
H H+V DD L+ +Y +L + E ++ + ++ RGL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 479 AYLHEDCHPRIIHRDIKSSNILL 501
Y+H ++H DIK SNI +
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFI 146
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 73/201 (36%), Gaps = 55/201 (27%)
Query: 361 ELVKATDGFADQNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGE-----------RE 409
EL + Q + G +G+V G +G VAIK++ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 410 FKAEVEIISRIHH-----------------RHLVSLVGYCISDDRRLLIYD----YVPNN 448
E+ +++ HH H + LV + D +I+D P +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 449 TLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQ 508
YF H GL LHE ++HRD+ NILL +N +
Sbjct: 136 IQYFMYH------------------ILLGLHVLHE---AGVVHRDLHPGNILLADNNDIT 174
Query: 509 VSDFGLAKL-ALDAN-THITT 527
+ DF LA+ DAN TH T
Sbjct: 175 ICDFNLAREDTADANKTHYVT 195
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 366 TDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLK--IGGGQGEREFKAEVEIISRI-H 421
T F + +G G FGSV+K DG AIK+ K + G E+ EV + +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIA---AGAARGL 478
H H+V DD L+ +Y +L + E ++ + ++ RGL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 479 AYLHEDCHPRIIHRDIKSSNILL 501
Y+H ++H DIK SNI +
Sbjct: 125 RYIHSMS---LVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 366 TDGFADQNLLGEGGFGSVYKGYLP-DGREVAIKQLK--IGGGQGEREFKAEVEIISRI-H 421
T F + +G G FGSV+K DG AIK+ K + G E+ EV + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 422 HRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIA---AGAARGL 478
H H+V DD L+ +Y +L + E ++ + ++ RGL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 479 AYLHEDCHPRIIHRDIKSSNILL 501
Y+H ++H DIK SNI +
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFI 146
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 73/201 (36%), Gaps = 55/201 (27%)
Query: 361 ELVKATDGFADQNLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGE-----------RE 409
EL + Q + G +G+V G +G VAIK++ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 410 FKAEVEIISRIHH-----------------RHLVSLVGYCISDDRRLLIYD----YVPNN 448
E+ +++ HH H + LV + D +I+D P +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 449 TLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQ 508
YF H GL LHE ++HRD+ NILL +N +
Sbjct: 136 IQYFMYH------------------ILLGLHVLHE---AGVVHRDLHPGNILLADNNDIT 174
Query: 509 VSDFGLAKL-ALDAN-THITT 527
+ DF LA+ DAN TH T
Sbjct: 175 ICDFNLAREDTADANKTHYVT 195
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 20/176 (11%)
Query: 367 DGFADQNLLGEGGFGSVYKGYLPDGREV-AIKQLKIGGGQGERE---FKAEVEIISRIHH 422
+ F ++G G FG V L + +V A+K L E F+ E +++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 423 RHLVSLVGYCISDDRRL-LIYDY-VPNNTLYFHLHGEGRPVLDWA----TRVKIAAGAAR 476
+ + +L Y DD L L+ DY V + L E R + A + IA +
Sbjct: 134 KWITTL-HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
L Y +HRDIK NIL+D N +++DFG ++ T ++ +GT
Sbjct: 193 QLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 44/189 (23%)
Query: 367 DGFADQNLLGEGGFGSVY-KGYLPDGREVAIKQLKIGGGQGERE-FKAEVEIISRIHHRH 424
D F + LG G FG V+ G E IK + Q E +AE+E++ + H +
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 425 LVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARG------- 477
++ + + DY +N EG +L+ +I + ARG
Sbjct: 82 IIKIFE---------VFEDY--HNMYIVMETCEGGELLE-----RIVSAQARGKALSEGY 125
Query: 478 -----------LAYLHEDCHPRIIHRDIKSSNILLDN---NFEAQVSDFGLAKLALDANT 523
LAY H ++H+D+K NIL + + ++ DFGLA+L ++
Sbjct: 126 VAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL-FKSDE 181
Query: 524 HITTRVMGT 532
H +T GT
Sbjct: 182 H-STNAAGT 189
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANT--HITTR 528
+GL Y+H ++HRD+K N+ ++ + E ++ DFGLA+ A DA ++ TR
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEMTGYVVTR 205
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
G+ +LH IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 477 GLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLA 518
G+ +LH IIHRD+K SNI++ ++ ++ DFGLA+ A
Sbjct: 136 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 174
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDANT--HITTR 528
+GL Y+H ++HRD+K N+ ++ + E ++ DFGLA+ A DA ++ TR
Sbjct: 137 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA-DAEMTGYVVTR 187
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQL--KIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
LG+G F V + + G+E A K + K + ++ + E I + H ++V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL-AYLHEDCHPR-I 489
+ LI+D V L+ E ++ + + + L A LH CH +
Sbjct: 90 ISEEGHHYLIFDLVTGGELF-----EDIVAREYYSEADASHCIQQILEAVLH--CHQMGV 142
Query: 490 IHRDIKSSNILLDNNFE---AQVSDFGLA 515
+HRD+K N+LL + + +++DFGLA
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 366 TDGFADQNLLGEGGFGSVYKGY-LPDGREVAIKQL--KIGGGQGEREFKAEVEIISRIHH 422
TD + +G+G F V + L G E A K + K + ++ + E I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 423 RHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL-AYL 481
++V L + L++D V L+ E ++ + + + L A L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELF-----EDIVAREYYSEADASHCIQQILEAVL 117
Query: 482 HEDCHPR-IIHRDIKSSNILLDNNFE---AQVSDFGLA 515
H CH ++HRD+K N+LL + + +++DFGLA
Sbjct: 118 H--CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 359 YEELVKATDGFADQNLLGEGGFGSVY--KGYLPDGRE--VAIKQLKIGGGQGEREFKAEV 414
YE + + ++ F ++ +GEG F SVY L G E +A+K L I R AE+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL-IPTSHPIR-IAAEL 70
Query: 415 EIISRIHHRHLVSLVGYCI-SDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAG 473
+ ++ + V V YC +D ++ Y+ + + L+ L + +
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREYMLN 125
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA-QVSDFGLAK 516
+ L +H+ I+HRD+K SN L + + + DFGLA+
Sbjct: 126 LFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREF--KAEVEI-ISR 419
K D + +L+G+G FG V K Y +E VAIK +K ++ F +A++E+ +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLE 105
Query: 420 IHHRHLVSLVGYCISDDRRL-------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAA 472
+ ++H + Y + R L+++ + N + R V TR K A
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQ 164
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDN--NFEAQVSDFG 513
L +L IIH D+K NILL N ++ DFG
Sbjct: 165 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 375 LGEGGFGSVYKGYLPDGREVAIKQLKIGGGQG-EREFKAEVEIISRIHHRHLVSLVGYCI 433
+G G +G VYK DG++ LK G G E+ ++ + H +++SL +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 434 S--DDRRLLIYDYVPNNTLY---FHLHGEG--RPVLDWATRVK-IAAGAARGLAYLHEDC 485
S D + L++DY ++ + FH + +PV VK + G+ YLH +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 486 HPRIIHRDIKSSNILL----DNNFEAQVSDFGLAKL 517
++HRD+K +NIL+ +++D G A+L
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREF--KAEVEI-ISR 419
K D + +L+G+G FG V K Y +E VAIK +K ++ F +A++E+ +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLE 105
Query: 420 IHHRHLVSLVGYCISDDRRL-------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAA 472
+ ++H + Y + R L+++ + N + R V TR K A
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQ 164
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA--QVSDFG 513
L +L IIH D+K NILL N + ++ DFG
Sbjct: 165 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 364 KATDGFADQNLLGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREF--KAEVEI-ISR 419
K D + +L+G+G FG V K Y +E VAIK +K ++ F +A++E+ +
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLE 86
Query: 420 IHHRHLVSLVGYCISDDRRL-------LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAA 472
+ ++H + Y + R L+++ + N + R V TR K A
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQ 145
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEA--QVSDFG 513
L +L IIH D+K NILL N + ++ DFG
Sbjct: 146 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 427 SLVGYC 432
+L+G C
Sbjct: 95 NLLGAC 100
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 427 SLVGYC 432
+L+G C
Sbjct: 88 NLLGAC 93
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 201 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 427 SLVGYC 432
+L+G C
Sbjct: 90 NLLGAC 95
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 203 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 375 LGEGGFGSVYKG------YLPDGREVAIKQLKIGGGQGE-REFKAEVEIISRI-HHRHLV 426
LG G FG V + R VA+K LK G E R +E++I+ I HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 427 SLVGYC 432
+L+G C
Sbjct: 97 NLLGAC 102
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 475 ARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAK 516
A+G+ +L + IHRD+ + NILL ++ DFGLA+
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 30/189 (15%)
Query: 359 YEELVKATDGFADQ-------NLLGEGGFGSVYKGYLPDGREVAIKQLKIGGGQGERE-- 409
YE++VK G + ++G G FG V ++V +L +R
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 410 --FKAEVEIISRIHHRHLVSLVGYC-ISDDRRL-LIYDYVPNNTLYFHLHGEGRPVLDWA 465
F E +I++ + +V L +C DD+ L ++ +Y+P L + P WA
Sbjct: 120 AFFWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-KWA 176
Query: 466 ----TRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLA-KLALD 520
V +A A + +IHRD+K N+LLD + +++DFG K+
Sbjct: 177 KFYTAEVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 521 ANTHITTRV 529
H T V
Sbjct: 228 GMVHCDTAV 236
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 34/168 (20%)
Query: 372 QNLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+ +LG G G+V ++G GR VA+K++ I E+++++ H +
Sbjct: 20 EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL---MEIKLLTE-SDDHPNVIRY 74
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVK-------IAAGAARGLAYL 481
YC R L Y+ +L E + V D +++ + A G+A+L
Sbjct: 75 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 482 HEDCHPRIIHRDIKSSNILLDN-------------NFEAQVSDFGLAK 516
H +IIHRD+K NIL+ N +SDFGL K
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 34/168 (20%)
Query: 372 QNLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+ +LG G G+V ++G GR VA+K++ I E+++++ H +
Sbjct: 20 EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL---MEIKLLTE-SDDHPNVIRY 74
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVK-------IAAGAARGLAYL 481
YC R L Y+ +L E + V D +++ + A G+A+L
Sbjct: 75 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 482 HEDCHPRIIHRDIKSSNILLDN-------------NFEAQVSDFGLAK 516
H +IIHRD+K NIL+ N +SDFGL K
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNN-FEAQVSDFGLA 515
A GL YLH RI+H D+K+ N+LL ++ A + DFG A
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNN-FEAQVSDFGLA 515
A GL YLH RI+H D+K+ N+LL ++ A + DFG A
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNN-FEAQVSDFGLA 515
A GL YLH RI+H D+K+ N+LL ++ A + DFG A
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNN-FEAQVSDFGLA 515
A GL YLH RI+H D+K+ N+LL ++ A + DFG A
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHH--RHLVSLVGY 431
+G G FG +Y G + EVAIK + + ++++ I RI + ++ +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESK---IYRILQGGTGIPNVRWF 71
Query: 432 CISDDRRLLIYDYV-PNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRII 490
+ D +L+ D + P+ F+ L T + +A + ++H +
Sbjct: 72 GVEGDYNVLVMDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHSKS---FL 125
Query: 491 HRDIKSSNILLDNNFEAQ---VSDFGLAKLALDANTH 524
HRDIK N L+ A + DFGLAK D +TH
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 474 AARGLAYLHEDCHPRIIHRDIKSSNILLDNN-FEAQVSDFGLA 515
A GL YLH RI+H D+K+ N+LL ++ A + DFG A
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 34/168 (20%)
Query: 372 QNLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+ +LG G G+V ++G GR VA+K++ I E+++++ H +
Sbjct: 38 EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL---MEIKLLTE-SDDHPNVIRY 92
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVK-------IAAGAARGLAYL 481
YC R L Y+ +L E + V D +++ + A G+A+L
Sbjct: 93 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 482 HEDCHPRIIHRDIKSSNILLDN-------------NFEAQVSDFGLAK 516
H +IIHRD+K NIL+ N +SDFGL K
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 34/168 (20%)
Query: 372 QNLLGEGGFGSV-YKGYLPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVG 430
+ +LG G G+V ++G GR VA+K++ I E+++++ H +
Sbjct: 38 EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL---MEIKLLTE-SDDHPNVIRY 92
Query: 431 YCISDDRRLLIYDYVPNNTLYFHLHG--EGRPVLDWATRVK-------IAAGAARGLAYL 481
YC R L Y+ +L E + V D +++ + A G+A+L
Sbjct: 93 YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 482 HEDCHPRIIHRDIKSSNILLDN-------------NFEAQVSDFGLAK 516
H +IIHRD+K NIL+ N +SDFGL K
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 352 HSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREF 410
HS + ++ TDG+ + +G G + + + E A+K + + +R+
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDP 62
Query: 411 KAEVEIISRI-HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK 469
E+EI+ R H ++++L + DD + Y YV + +G +LD R K
Sbjct: 63 TEEIEILLRYGQHPNIITLKD--VYDDGK---YVYVVTELM------KGGELLDKILRQK 111
Query: 470 ---------IAAGAARGLAYLHEDCHPRIIHRDIKSSNILL----DNNFEAQVSDFGLAK 516
+ + + YLH ++HRD+K SNIL N ++ DFG AK
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 489 IIHRDIKSSNILL---DNNFEAQVSDFGLAKLALDANTHITT 527
++HRD+K N+L ++N E ++ DFG A+L N + T
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 375 LGEGGFGSVYKGY-LPDGREVA--IKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGY 431
LG+G F V + + G+E A I K + ++ + E I + H ++V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGL-AYLHEDCHPR-I 489
+ LI+D V L+ E ++ + + + L A LH CH +
Sbjct: 79 ISEEGHHYLIFDLVTGGELF-----EDIVAREYYSEADASHCIQQILEAVLH--CHQMGV 131
Query: 490 IHRDIKSSNILLDNNFE---AQVSDFGLA 515
+HR++K N+LL + + +++DFGLA
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 375 LGEGGFGSVYKGYLPDGRE-VAIKQLKIGGGQGEREFKAEVEIISR--IHHRHLVSLVGY 431
+G G FG +E VA+K ++ G E + EII+ + H ++V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE---NVQREIINHRSLRHPNIVRFKEV 84
Query: 432 CISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ +I +Y LY + GR D A G++Y H +I H
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF--FFQQLLSGVSYCHS---MQICH 139
Query: 492 RDIKSSNILLDNN--FEAQVSDFGLAK 516
RD+K N LLD + ++ DFG +K
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
+HRDIK N+LLD N +++DFG D T ++ +GT
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 30/166 (18%)
Query: 366 TDGFADQNLLGEGGFGSVY--KGYLPDGREVAIKQLK---IGGGQGEREFKAEVEIISRI 420
+D + LG G +G V K L G E AIK +K + EV ++ ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK--------IAA 472
H +++ L Y +D+R N L ++ G + R K I
Sbjct: 79 DHPNIMKL--YEFFEDKR--------NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLA 515
G YLH+ I+HRD+K N+LL++ ++ DFGL+
Sbjct: 129 QVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRVMGT 532
+HRDIK N+LLD N +++DFG D T ++ +GT
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G G FG +Y G + G EVAIK + + E +I + + + +C
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIYKMMQGGVGIPTIRWCG 72
Query: 434 SD-DRRLLIYDYV-PNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ D +++ + + P+ F+ T + +A + Y+H IH
Sbjct: 73 AEGDYNVMVMELLGPSLEDLFNFCSRK---FSLKTVLLLADQMISRIEYIHS---KNFIH 126
Query: 492 RDIKSSNILL---DNNFEAQVSDFGLAKLALDANTH 524
RD+K N L+ + DFGLAK DA TH
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 375 LGEGGFGSVYKGY-LPDGREVAIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCI 433
+G G FG +Y G + G EVAIK + + E +I + + + +C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIYKMMQGGVGIPTIRWCG 74
Query: 434 SD-DRRLLIYDYV-PNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRIIH 491
++ D +++ + + P+ F+ T + +A + Y+H IH
Sbjct: 75 AEGDYNVMVMELLGPSLEDLFNFCSRK---FSLKTVLLLADQMISRIEYIHS---KNFIH 128
Query: 492 RDIKSSNILL---DNNFEAQVSDFGLAKLALDANTH 524
RD+K N L+ + DFGLAK DA TH
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 476 RGLAYLHEDCHPRIIHRDIKSSNILL 501
+GL YLH C +IIH DIK NIL+
Sbjct: 151 QGLDYLHSKC--KIIHTDIKPENILM 174
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 11/149 (7%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREV--AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
+N +G G +G V K + G + A K++ + FK E+EI+ + H +++ L
Sbjct: 31 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
+ L+ + L+ + + V + +I +AY H+ +
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVV--HKRVFRESDAARIMKDVLSAVAYCHK---LNV 144
Query: 490 IHRDIKSSNILL---DNNFEAQVSDFGLA 515
HRD+K N L + ++ DFGLA
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 11/149 (7%)
Query: 372 QNLLGEGGFGSVYKGYLPDGREV--AIKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLV 429
+N +G G +G V K + G + A K++ + FK E+EI+ + H +++ L
Sbjct: 14 ENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 430 GYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPRI 489
+ L+ + L+ + + V + +I +AY H+ +
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVV--HKRVFRESDAARIMKDVLSAVAYCHK---LNV 127
Query: 490 IHRDIKSSNILL---DNNFEAQVSDFGLA 515
HRD+K N L + ++ DFGLA
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 30/166 (18%)
Query: 366 TDGFADQNLLGEGGFGSVY--KGYLPDGREVAIKQLK---IGGGQGEREFKAEVEIISRI 420
+D + LG G +G V K L G E AIK +K + EV ++ ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 421 HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK--------IAA 472
H +++ L Y +D+R N L ++ G + R K I
Sbjct: 62 DHPNIMKL--YEFFEDKR--------NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 473 GAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFE---AQVSDFGLA 515
G YLH+ I+HRD+K N+LL++ ++ DFGL+
Sbjct: 112 QVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 14/94 (14%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSSN 498
L+++Y+ NNT + L+ + + D+ R + + L Y CH + I+HRD+K N
Sbjct: 117 LVFEYI-NNTDFKQLY---QILTDFDIRFYMYE-LLKALDY----CHSKGIMHRDVKPHN 167
Query: 499 ILLDNNFEA-QVSDFGLAKL---ALDANTHITTR 528
+++D+ + ++ D+GLA+ A + N + +R
Sbjct: 168 VMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 105 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 154
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 155 NVMIDHELRKLRLIDWGLAEF 175
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 126 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 175
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 176 NVMIDHELRKLRLIDWGLAEF 196
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 107 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 156
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 157 NVMIDHELRKLRLIDWGLAEF 177
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 105 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 154
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 155 NVMIDHELRKLRLIDWGLAEF 175
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 105 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 154
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 155 NVMIDHELRKLRLIDWGLAEF 175
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 105 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 154
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 155 NVMIDHELRKLRLIDWGLAEF 175
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 106 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 155
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 156 NVMIDHELRKLRLIDWGLAEF 176
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 106 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 155
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 156 NVMIDHELRKLRLIDWGLAEF 176
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 352 HSRSMFTYEELVKATDGFADQNLLGEGGFGSVYKG-YLPDGREVAIKQLKIGGGQGEREF 410
HS + ++ TDG+ + +G G + + + E A+K + + +R+
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIID----KSKRDP 62
Query: 411 KAEVEIISRI-HHRHLVSLVGYCISDDRRLLIYDYVPNNTLYFHLHGEGRPVLDWATRVK 469
E+EI+ R H ++++L + DD + Y YV +G +LD R K
Sbjct: 63 TEEIEILLRYGQHPNIITLKD--VYDDGK---YVYVVTEL------XKGGELLDKILRQK 111
Query: 470 ---------IAAGAARGLAYLHEDCHPRIIHRDIKSSNILL----DNNFEAQVSDFGLAK 516
+ + + YLH ++HRD+K SNIL N ++ DFG AK
Sbjct: 112 FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 105 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 154
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 155 NVMIDHELRKLRLIDWGLAEF 175
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVL-DWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSS 497
LI++YV NNT + L+ P L D+ R I + L Y CH + I+HRD+K
Sbjct: 105 LIFEYV-NNTDFKVLY----PTLTDYDIRYYIYE-LLKALDY----CHSQGIMHRDVKPH 154
Query: 498 NILLDNNF-EAQVSDFGLAKL 517
N+++D+ + ++ D+GLA+
Sbjct: 155 NVMIDHELRKLRLIDWGLAEF 175
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 14/94 (14%)
Query: 440 LIYDYVPNNTLYFHLHGEGRPVLDWATRVKIAAGAARGLAYLHEDCHPR-IIHRDIKSSN 498
L+++Y+ NNT + L+ + + D+ R + + L Y CH + I+HRD+K N
Sbjct: 112 LVFEYI-NNTDFKQLY---QILTDFDIRFYMYE-LLKALDY----CHSKGIMHRDVKPHN 162
Query: 499 ILLDNNFEA-QVSDFGLAKL---ALDANTHITTR 528
+++D+ + ++ D+GLA+ A + N + +R
Sbjct: 163 VMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 490 IHRDIKSSNILLDNNFEAQVSDFGLAKLALDANTHITTRV 529
+HRDIK NILLD +++DFG + L L A+ + + V
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLV 222
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 478 LAYLHEDCHPRIIHRDIKSSNILL---DNNFEAQVSDFGLAKLALDANTH 524
+ Y+H IHRD+K N L+ + DFGLAK DA TH
Sbjct: 118 IEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 468 VKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNF---EAQVSDFGLAK 516
+++ G+ YLH++ I+H D+K NILL + + + ++ DFG+++
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 489 IIHRDIKSSNILLD-NNFEAQVSDFGLAKLALDA 521
++HRDIK NIL+D N E ++ DFG L D
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,274,759
Number of Sequences: 62578
Number of extensions: 347812
Number of successful extensions: 2489
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 919
Number of HSP's gapped (non-prelim): 1114
length of query: 534
length of database: 14,973,337
effective HSP length: 103
effective length of query: 431
effective length of database: 8,527,803
effective search space: 3675483093
effective search space used: 3675483093
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)