Query 009452
Match_columns 534
No_of_seqs 501 out of 2872
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 05:30:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009452.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009452hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 3.4E-40 1.1E-44 323.0 28.8 261 22-292 4-281 (285)
2 1n11_A Ankyrin; clathrin, BAND 100.0 2.3E-39 7.9E-44 338.2 31.0 265 17-292 74-372 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1E-39 3.4E-44 329.1 25.7 261 18-291 20-328 (337)
4 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-38 3.8E-43 333.0 31.9 267 17-295 41-309 (437)
5 2xai_A ASB-9, ankyrin repeat a 100.0 1.8E-39 6E-44 315.3 21.7 249 22-284 2-258 (261)
6 3d9h_A CDNA FLJ77766, highly s 100.0 7.8E-40 2.7E-44 322.1 19.3 265 16-290 8-280 (285)
7 2fo1_E LIN-12 protein; beta-ba 100.0 1.7E-39 5.8E-44 332.2 16.0 261 16-289 87-371 (373)
8 3ljn_A Hypothetical protein; a 100.0 1E-38 3.5E-43 325.1 17.4 265 12-288 9-313 (364)
9 3utm_A Tankyrase-1; tankyrase, 100.0 2.3E-37 7.7E-42 312.5 25.5 274 15-299 16-315 (351)
10 1k1a_A B-cell lymphoma 3-encod 100.0 3.1E-37 1.1E-41 294.9 20.0 231 55-288 2-240 (241)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-37 8.5E-42 298.7 19.5 213 72-288 33-247 (253)
12 3b7b_A Euchromatic histone-lys 100.0 2.7E-36 9.3E-41 287.9 24.5 219 17-246 5-223 (237)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 9.2E-37 3.1E-41 294.7 20.5 226 16-251 3-243 (253)
14 1oy3_D Transcription factor in 100.0 8.5E-37 2.9E-41 298.9 18.9 252 17-275 3-269 (282)
15 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-35 4.1E-40 290.6 26.7 233 20-262 36-284 (285)
16 3b7b_A Euchromatic histone-lys 100.0 6.4E-36 2.2E-40 285.3 23.5 224 56-284 5-230 (237)
17 3utm_A Tankyrase-1; tankyrase, 100.0 2.7E-35 9.1E-40 297.2 28.9 256 18-289 53-334 (351)
18 3aji_A 26S proteasome non-ATPa 100.0 3.6E-36 1.2E-40 285.8 21.1 212 20-242 3-214 (231)
19 3d9h_A CDNA FLJ77766, highly s 100.0 3.5E-36 1.2E-40 296.0 21.6 227 18-258 54-281 (285)
20 3aji_A 26S proteasome non-ATPa 100.0 4.7E-36 1.6E-40 285.1 21.7 226 59-289 3-230 (231)
21 2dzn_A Probable 26S proteasome 100.0 3.8E-36 1.3E-40 285.0 20.6 214 23-243 2-218 (228)
22 1k1a_A B-cell lymphoma 3-encod 100.0 6.4E-36 2.2E-40 285.8 20.2 220 17-246 3-229 (241)
23 2xai_A ASB-9, ankyrin repeat a 100.0 9.2E-36 3.2E-40 289.1 21.3 220 61-290 2-223 (261)
24 4b93_B Ankyrin repeat domain-c 100.0 8.7E-37 3E-41 297.5 14.1 242 19-266 7-251 (269)
25 3ljn_A Hypothetical protein; a 100.0 5.4E-36 1.8E-40 305.1 20.4 229 56-290 14-270 (364)
26 2dzn_A Probable 26S proteasome 100.0 2.3E-35 7.8E-40 279.6 22.9 218 62-285 2-226 (228)
27 3eu9_A Huntingtin-interacting 100.0 8.4E-35 2.9E-39 277.3 21.6 229 57-290 4-236 (240)
28 4g8k_A 2-5A-dependent ribonucl 100.0 4.5E-34 1.5E-38 287.7 23.8 229 59-291 22-300 (337)
29 4b93_B Ankyrin repeat domain-c 100.0 1.4E-35 4.7E-40 289.1 12.1 227 57-287 6-242 (269)
30 3kea_A K1L; tropism, ANK repea 100.0 7.9E-35 2.7E-39 286.4 17.7 240 31-293 7-250 (285)
31 2fo1_E LIN-12 protein; beta-ba 100.0 1.4E-34 4.9E-39 295.7 18.8 230 18-256 119-371 (373)
32 1s70_B 130 kDa myosin-binding 100.0 1.1E-34 3.6E-39 286.8 16.7 246 21-285 38-286 (299)
33 1oy3_D Transcription factor in 100.0 3.5E-34 1.2E-38 280.3 18.9 238 56-296 3-257 (282)
34 3eu9_A Huntingtin-interacting 100.0 1.5E-33 5.2E-38 268.6 22.3 232 18-259 4-238 (240)
35 2f8y_A Notch homolog 1, transl 100.0 8.5E-34 2.9E-38 267.9 18.9 216 73-292 2-219 (223)
36 2f8y_A Notch homolog 1, transl 100.0 3E-33 1E-37 264.2 19.1 213 34-256 2-216 (223)
37 3kea_A K1L; tropism, ANK repea 100.0 1.3E-32 4.4E-37 270.5 17.9 223 17-261 25-251 (285)
38 2rfa_A Transient receptor pote 100.0 8.6E-32 2.9E-36 255.9 20.8 194 22-222 2-220 (232)
39 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-33 5.2E-38 269.0 8.1 218 17-240 2-226 (236)
40 3hra_A Ankyrin repeat family p 100.0 1.4E-31 5E-36 248.4 20.6 192 95-287 3-201 (201)
41 1ikn_D Protein (I-kappa-B-alph 100.0 4.2E-33 1.4E-37 265.9 10.4 215 57-273 3-228 (236)
42 2rfa_A Transient receptor pote 100.0 1.2E-31 4.2E-36 254.8 19.0 206 61-290 2-223 (232)
43 1s70_B 130 kDa myosin-binding 100.0 9.2E-33 3.1E-37 272.9 11.2 256 29-296 4-264 (299)
44 3hra_A Ankyrin repeat family p 100.0 1.1E-30 3.6E-35 242.5 22.2 194 20-221 2-200 (201)
45 1sw6_A Regulatory protein SWI6 100.0 1.9E-32 6.7E-37 274.7 9.7 240 18-275 47-327 (327)
46 2pnn_A Transient receptor pote 100.0 2.2E-31 7.4E-36 259.9 11.5 219 17-237 7-271 (273)
47 2etb_A Transient receptor pote 100.0 4.7E-31 1.6E-35 254.9 13.2 204 62-289 2-246 (256)
48 2pnn_A Transient receptor pote 100.0 4.1E-31 1.4E-35 257.9 11.9 213 56-289 7-258 (273)
49 2etb_A Transient receptor pote 100.0 2.4E-30 8.3E-35 249.9 15.1 197 22-222 1-244 (256)
50 4gpm_A Engineered protein OR26 100.0 3.3E-29 1.1E-33 226.1 18.5 156 26-191 7-162 (169)
51 1sw6_A Regulatory protein SWI6 100.0 3.4E-31 1.2E-35 265.7 5.6 255 20-296 20-315 (327)
52 3jxi_A Vanilloid receptor-rela 100.0 4.4E-30 1.5E-34 248.6 11.7 199 20-222 2-248 (260)
53 4gpm_A Engineered protein OR26 100.0 1.3E-28 4.6E-33 222.1 19.3 157 64-226 6-162 (169)
54 3jxi_A Vanilloid receptor-rela 100.0 3.7E-30 1.3E-34 249.1 8.6 212 59-291 2-252 (260)
55 4hbd_A KN motif and ankyrin re 100.0 1E-28 3.5E-33 241.5 13.7 191 23-221 76-272 (276)
56 4hbd_A KN motif and ankyrin re 100.0 3.4E-28 1.2E-32 237.8 13.2 188 98-287 77-273 (276)
57 2rfm_A Putative ankyrin repeat 99.9 3.7E-27 1.3E-31 217.2 17.7 164 53-221 26-189 (192)
58 3v30_A DNA-binding protein rfx 99.9 2.2E-27 7.5E-32 214.7 15.5 170 62-236 2-171 (172)
59 3v30_A DNA-binding protein rfx 99.9 3.5E-27 1.2E-31 213.3 16.6 170 23-202 2-171 (172)
60 2rfm_A Putative ankyrin repeat 99.9 3.7E-27 1.3E-31 217.2 16.8 165 14-188 26-190 (192)
61 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.9E-27 9.8E-32 211.5 14.5 157 23-189 5-161 (162)
62 2aja_A Ankyrin repeat family p 99.9 6.2E-30 2.1E-34 259.9 -3.6 155 23-189 92-249 (376)
63 3v31_A Ankyrin repeat family A 99.9 5.2E-27 1.8E-31 211.1 15.9 154 62-220 3-156 (167)
64 3v31_A Ankyrin repeat family A 99.9 8E-27 2.7E-31 209.8 16.9 160 22-191 2-161 (167)
65 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.5E-26 5.3E-31 208.6 17.3 155 61-220 13-167 (169)
66 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-26 3.7E-31 207.7 15.1 156 61-221 4-159 (162)
67 2vge_A RELA-associated inhibit 99.9 2.1E-29 7.3E-34 239.3 -3.0 201 79-283 2-207 (229)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.7E-26 1.3E-30 206.1 17.8 161 18-188 9-169 (169)
69 1awc_B Protein (GA binding pro 99.9 4.4E-26 1.5E-30 202.0 16.6 150 63-218 3-152 (153)
70 2vge_A RELA-associated inhibit 99.9 4.5E-29 1.5E-33 237.0 -3.1 197 39-246 1-201 (229)
71 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.4E-26 1.9E-30 201.9 16.0 153 62-220 2-154 (156)
72 1awc_B Protein (GA binding pro 99.9 5.7E-26 2E-30 201.3 16.0 151 23-184 2-152 (153)
73 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-26 4.2E-31 208.2 11.5 156 60-220 6-161 (165)
74 2aja_A Ankyrin repeat family p 99.9 1.8E-28 6.3E-33 249.1 -1.1 211 59-287 89-342 (376)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.4E-28 1.9E-32 231.1 1.1 207 61-273 4-227 (239)
76 3f6q_A Integrin-linked protein 99.9 8.1E-26 2.8E-30 205.8 15.2 155 62-220 5-159 (179)
77 3f6q_A Integrin-linked protein 99.9 5.1E-26 1.8E-30 207.2 13.3 162 97-292 5-166 (179)
78 3twr_A Tankyrase-2; ankyrin re 99.9 4.1E-26 1.4E-30 204.8 12.5 156 130-288 7-164 (165)
79 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-25 6.2E-30 198.5 15.1 155 22-187 1-155 (156)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.6E-26 1.9E-30 217.1 5.5 208 20-240 2-225 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 2.3E-23 8E-28 180.6 9.7 128 57-189 7-135 (136)
82 3t8k_A Uncharacterized protein 99.9 1.9E-23 6.7E-28 191.3 9.5 153 62-221 6-176 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 2.7E-23 9.1E-28 184.7 10.1 140 94-238 9-149 (156)
84 3t8k_A Uncharacterized protein 99.9 2.3E-23 7.8E-28 190.8 8.0 155 23-188 6-177 (186)
85 1bi7_B P16INK4A, MTS1, multipl 99.9 4.5E-23 1.5E-27 183.3 9.4 144 57-206 7-151 (156)
86 1d9s_A Cyclin-dependent kinase 99.9 1.7E-22 5.7E-27 175.2 11.1 130 88-221 3-133 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.5E-22 2.6E-26 167.8 14.8 125 61-189 1-125 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 6.4E-22 2.2E-26 171.5 12.6 125 60-188 12-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-21 7.3E-26 165.0 15.3 126 22-156 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-21 3.7E-26 170.0 12.5 128 18-154 9-136 (136)
91 3deo_A Signal recognition part 99.9 6.8E-22 2.3E-26 180.6 9.6 141 128-286 41-181 (183)
92 3deo_A Signal recognition part 99.9 8.9E-22 3.1E-26 179.8 9.3 140 59-220 41-180 (183)
93 3ui2_A Signal recognition part 99.8 1.1E-21 3.7E-26 188.0 8.9 169 22-221 14-182 (244)
94 3ui2_A Signal recognition part 99.8 5.2E-21 1.8E-25 183.2 12.8 144 128-289 42-185 (244)
95 3c5r_A BARD-1, BRCA1-associate 99.8 1.6E-21 5.4E-26 169.1 7.8 124 59-186 7-130 (137)
96 3c5r_A BARD-1, BRCA1-associate 99.8 2.9E-21 1E-25 167.4 7.9 126 92-220 5-130 (137)
97 2b0o_E UPLC1; arfgap, structur 99.8 1.3E-20 4.5E-25 186.1 11.9 137 132-276 152-298 (301)
98 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-20 4.1E-25 186.3 10.2 143 94-245 148-298 (301)
99 3aaa_C Myotrophin, protein V-1 99.8 1.6E-20 5.6E-25 159.5 9.3 110 60-173 5-114 (123)
100 3aaa_C Myotrophin, protein V-1 99.8 2.4E-20 8.3E-25 158.4 9.1 108 130-240 6-113 (123)
101 3ehr_A Osteoclast-stimulating 99.8 1.3E-20 4.5E-25 177.4 8.0 173 15-191 17-199 (222)
102 3ehr_A Osteoclast-stimulating 99.8 2.3E-20 8E-25 175.7 7.6 123 95-220 71-194 (222)
103 1dcq_A PYK2-associated protein 99.8 3.1E-19 1.1E-23 174.1 13.1 193 93-290 62-264 (278)
104 1dcq_A PYK2-associated protein 99.8 5E-18 1.7E-22 165.5 17.8 120 99-220 132-259 (278)
105 3jue_A Arfgap with coiled-coil 99.8 1.6E-18 5.6E-23 175.1 12.8 147 95-244 197-348 (368)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.9E-18 9.8E-23 137.9 10.9 90 62-154 2-91 (93)
107 3jue_A Arfgap with coiled-coil 99.8 2E-18 6.9E-23 174.5 12.3 146 60-209 197-347 (368)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.5E-18 1.5E-22 136.7 11.7 93 96-190 1-93 (93)
109 3lvq_E ARF-GAP with SH3 domain 99.8 3.5E-18 1.2E-22 180.8 13.9 120 99-220 134-261 (497)
110 3lvq_E ARF-GAP with SH3 domain 99.7 7.7E-18 2.6E-22 178.1 14.6 137 132-270 133-279 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.7 8.6E-18 2.9E-22 140.7 8.8 106 128-236 6-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.7 1.1E-17 3.8E-22 140.0 8.9 107 58-168 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 1.8E-15 6.2E-20 125.5 9.1 89 128-218 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 2.5E-15 8.6E-20 124.7 9.5 93 55-150 17-109 (110)
115 2l2t_A Receptor tyrosine-prote 58.8 9.6 0.00033 24.6 3.2 27 464-490 8-34 (44)
116 2iub_A CORA, divalent cation t 51.1 72 0.0025 31.0 9.9 35 331-365 286-320 (363)
117 2ks1_B Epidermal growth factor 48.5 10 0.00035 24.5 2.1 26 465-490 10-35 (44)
118 4ev6_A Magnesium transport pro 47.9 69 0.0024 30.8 9.1 23 343-365 274-296 (339)
119 2knc_B Integrin beta-3; transm 44.9 39 0.0013 24.9 5.1 27 465-491 10-36 (79)
120 3gvo_A Pumilio 2, pumilio homo 38.6 47 0.0016 32.1 6.3 227 15-246 29-266 (351)
121 2jwa_A Receptor tyrosine-prote 38.2 46 0.0016 21.4 3.9 10 465-474 11-20 (44)
122 3gvo_A Pumilio 2, pumilio homo 33.4 64 0.0022 31.1 6.3 228 14-246 64-309 (351)
123 3zrh_A Ubiquitin thioesterase 32.4 1E+02 0.0034 30.4 7.1 56 28-83 27-90 (454)
124 2l8s_A Integrin alpha-1; trans 26.3 83 0.0028 21.2 3.8 21 463-483 7-27 (54)
125 2k9j_B Integrin beta-3; transm 26.0 1.3E+02 0.0045 19.1 4.9 26 465-490 9-34 (43)
126 2knc_A Integrin alpha-IIB; tra 24.2 68 0.0023 21.6 3.1 21 463-483 10-30 (54)
127 4ev6_A Magnesium transport pro 22.7 4.4E+02 0.015 24.9 10.1 23 436-458 279-301 (339)
128 3v2y_A Sphingosine 1-phosphate 21.0 4.3E+02 0.015 26.4 10.3 22 477-498 229-250 (520)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.4e-40 Score=323.00 Aligned_cols=261 Identities=24% Similarity=0.324 Sum_probs=233.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHH
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAF 101 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L 101 (534)
+|.||||.|++.|+.++|++|++.+.+.+ ...+..|.||||+|+..|+.+++++|++.+. ..+..+..|.|||
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L 76 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVN-----FQEEEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATPF 76 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcc-----cccCCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHH
Confidence 57899999999999999999999987642 1226789999999999999999999999874 4566788999999
Q ss_pred HHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhh---------hhcCCCcHHHHH
Q 009452 102 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATI---------ARSNGKTALHSA 172 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~---------~~~~g~tpLh~A 172 (534)
|+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++... .+..|.||||.|
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 77 LLAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCc-cCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence 999999999999999999987654 4899999999999999999999999999887332 167899999999
Q ss_pred HHcCcHHHHHHHHhc-CCCCcccCCCCCCcHHHHHHhCCC----HHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH-
Q 009452 173 ARNGHLEIVKALLSK-EPGIVLRNDKKGQTALHMAVKGQS----IELVDELVKVEPVIINMVDAKGNSALHIATRKGRV- 246 (534)
Q Consensus 173 ~~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~----~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~- 246 (534)
+..|+.+++++|++. +.++. ..|..|.||||.|+..++ .+++++|++ .+.+++.+|..|+||||+|+..++.
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~ 233 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLG 233 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTT-CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHhcCCCCC-ccCCCCCCHHHHHHHccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 999999999999998 66654 458999999999999999 999999999 6778999999999999999999986
Q ss_pred -HHHhhh-cCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCC
Q 009452 247 -QKLLNI-NGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGK 292 (534)
Q Consensus 247 -~~ll~~-~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~ 292 (534)
.++|+. .|++++..|..|.|||++|+..++.+++++|+++|+++..
T Consensus 234 ~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 234 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred HHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 466666 9999999999999999999999999999999999998754
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-39 Score=338.18 Aligned_cols=265 Identities=28% Similarity=0.436 Sum_probs=147.1
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccC
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARN 96 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 96 (534)
+..+..|.||||+|++.|+.++|++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.. ....+..
T Consensus 74 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~ 145 (437)
T 1n11_A 74 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANP------NLATTAGHTPLHIAAREGHVETVLALLEKEAS--QACMTKK 145 (437)
T ss_dssp SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--SCCCCTT
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC------CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CcCCCCC
Confidence 345678888888888888888888888887654 23355566666666666666666666665422 2334445
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCch------------------
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLA------------------ 158 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~------------------ 158 (534)
|.||||+|+..|+.+++++|++++.+... .|..|.||||+|+..|+.+++++|++++.++.
T Consensus 146 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 224 (437)
T 1n11_A 146 GFTPLHVAAKYGKVRVAELLLERDAHPNA-AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ 224 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 55555555555555555555555544332 24455555555555555555555555554431
Q ss_pred --------------hhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCc
Q 009452 159 --------------TIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPV 224 (534)
Q Consensus 159 --------------~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~ 224 (534)
...+..|.||||+|+..|+.+++++|++++++... .|..|.||||+|+..|+.+++++|++ .+.
T Consensus 225 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~ 302 (437)
T 1n11_A 225 VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL-GNKSGLTPLHLVAQEGHVPVADVLIK-HGV 302 (437)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHH-HTC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHh-CCc
Confidence 23334444555555555555555555554444332 24445555555555555555555554 234
Q ss_pred cccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCC
Q 009452 225 IINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGK 292 (534)
Q Consensus 225 ~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~ 292 (534)
+++.+|..|+||||+|+..|+. .++|+..|++++.+|..|.||||+|+..|+.+++++|+++|+++..
T Consensus 303 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 303 MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 4455555555555555555543 4455555555555555555555555555555555555555555443
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1e-39 Score=329.07 Aligned_cols=261 Identities=26% Similarity=0.337 Sum_probs=188.3
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcC-CCCCcHHHHHHHcCCHHHHHHHHHhCCcc--------
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMN-QSGETALYVAAEYGYVDMVREMIRYHDTS-------- 88 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n-~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~-------- 88 (534)
..+.+|+|+||.||+.|++++|+.|++.|++++ .++ ..|.||||+||..|+.++|++|++++...
T Consensus 20 ~~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn------~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~ 93 (337)
T 4g8k_A 20 RAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVN------FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA 93 (337)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTT------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC------ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCC
Confidence 345568899999999999999999999998753 334 45999999999999999999999987532
Q ss_pred -----------------------cccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccc---------cCCCCCCcHHH
Q 009452 89 -----------------------LAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLM---------TFDSSNTTALH 136 (534)
Q Consensus 89 -----------------------~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~---------~~d~~g~tpLh 136 (534)
..+..+..|.||||+|+..|+.+++++|+++++++.. ..+..|.||||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~ 173 (337)
T 4g8k_A 94 TPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 173 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHH
T ss_pred chhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHH
Confidence 2234556677777777777777777777777654421 22455777777
Q ss_pred HHHhcCCHHHHHHHHhc-CCCchhhhhcCCCcHHHHHHHcCc----HHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCC
Q 009452 137 TASSQGHVEVVKFLLEK-GSTLATIARSNGKTALHSAARNGH----LEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQS 211 (534)
Q Consensus 137 ~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpLh~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 211 (534)
+|+..|+.+++++|+++ |+++ +..+..|.||+|.++..++ .+++++|+++|++++.. |..|+||||+|+..|+
T Consensus 174 ~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~-d~~g~t~L~~a~~~~~ 251 (337)
T 4g8k_A 174 DAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTPLILAVEKKH 251 (337)
T ss_dssp HHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCC-CGGGCCHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhhh
Confidence 77777777777777753 5655 5566677777776654332 35667777777766543 6677777777777777
Q ss_pred HHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCC
Q 009452 212 IELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVP 289 (534)
Q Consensus 212 ~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~ 289 (534)
.++++.|+...+.++|.+|.+|+||||+|++.|+. .++|+++|+++|. .+||++|+..|+.+++++|+++||+
T Consensus 252 ~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 252 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSHGAK 326 (337)
T ss_dssp HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred hHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHHHCcCC
Confidence 77777777766667777777777777777777765 5677777777654 3477777777777777777777776
Q ss_pred CC
Q 009452 290 CG 291 (534)
Q Consensus 290 ~~ 291 (534)
++
T Consensus 327 ~d 328 (337)
T 4g8k_A 327 ED 328 (337)
T ss_dssp C-
T ss_pred CC
Confidence 54
No 4
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-38 Score=333.00 Aligned_cols=267 Identities=27% Similarity=0.387 Sum_probs=223.1
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccC
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARN 96 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 96 (534)
+..+..|.||||.|++.|+.++|++|++.+.+. +.++..|.||||+|+..|+.+++++|++.+. +.+..+..
T Consensus 41 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~ 112 (437)
T 1n11_A 41 NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV------NAKAKDDQTPLHCAARIGHTNMVKLLLENNA--NPNLATTA 112 (437)
T ss_dssp CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTT
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC------CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC--CCCCCCCC
Confidence 456788999999999999999999999998763 5668899999999999999999999999874 45667889
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcC
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNG 176 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 176 (534)
|.||||+|+..|+.+++++|++.+.+... .+..|.||||+|+..|+.+++++|+++++++ ...+..|.||||+|+..|
T Consensus 113 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 190 (437)
T 1n11_A 113 GHTPLHIAAREGHVETVLALLEKEASQAC-MTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHN 190 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcC
Confidence 99999999999999999999999887644 4889999999999999999999999999987 567788999999999999
Q ss_pred cHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcC
Q 009452 177 HLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNING 254 (534)
Q Consensus 177 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g 254 (534)
+.+++++|++++.++... +..|.||||.|+..|+.+++++|++ .+.+++..|..|.||||+|+..++. .++|+..|
T Consensus 191 ~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 268 (437)
T 1n11_A 191 NLDIVKLLLPRGGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQ-YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ 268 (437)
T ss_dssp CHHHHHHHGGGTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC
Confidence 999999999988876543 6778888888888888888888887 4556777777777777777777765 56666777
Q ss_pred CChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCCCCC
Q 009452 255 VDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGKSIK 295 (534)
Q Consensus 255 ~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~~~~ 295 (534)
++++..|..|.|||++|+..|+.+++++|+++|++......
T Consensus 269 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 309 (437)
T 1n11_A 269 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 309 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC
Confidence 77777777777777777777777777777777776654433
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=315.34 Aligned_cols=249 Identities=17% Similarity=0.137 Sum_probs=223.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHH
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAF 101 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L 101 (534)
+|.||||+|++.|+.+++++|++.+.+. +..|..|.||||+|+..|+.+++++|++.+ .+.+..+..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV------NIITADHVSPLHEACLGGHLSCVKILLKHG--AQVNGVTADWHTPL 73 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC------CCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHH
Confidence 6899999999999999999999998763 567889999999999999999999999987 45667889999999
Q ss_pred HHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHH
Q 009452 102 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIV 181 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv 181 (534)
|+|+..|+.+++++|++++++... +.+|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.+++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v 150 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACV 150 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSC--SCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHH
Confidence 999999999999999999988653 566999999999999999999999999987 66788999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcHHHHhhhcCC------
Q 009452 182 KALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQKLLNINGV------ 255 (534)
Q Consensus 182 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~------ 255 (534)
++|++.+++++. +..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..+.+.++++..+.
T Consensus 151 ~~Ll~~g~~~~~--~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpl~~A~~~~~~~~~ll~~~~~~~l~~ 227 (261)
T 2xai_A 151 KKLLESGADVNQ--GKGQDSPLHAVARTASEELACLLMD-FGADTQAKNAEGKRPVELVPPESPLAQLFLEREGPPSLMQ 227 (261)
T ss_dssp HHHHHHTCCTTC--CBTTBCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTCTHHHHHHHC-CCCCHHH
T ss_pred HHHHHcCCCCCC--CCCCCChHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCChhhhccccccHHHHHHhccCCccHHH
Confidence 999999998873 7899999999999999999999999 5788999999999999999999988888877665
Q ss_pred --ChHhhhccCCcHHHHHHhcCchhHHHHHH
Q 009452 256 --DKAVINKSRETALDTAEKTGHSEIGVILK 284 (534)
Q Consensus 256 --~~~~~n~~g~T~l~~A~~~~~~~i~~~L~ 284 (534)
+++.+|..|.||+|.|.+...++.++-++
T Consensus 228 ~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l 258 (261)
T 2xai_A 228 LCRLRIRKCFGIQQHHKITKLVLPEDLKQFL 258 (261)
T ss_dssp HHHHHHHTTSCTTCGGGGGGSSSCHHHHHHH
T ss_pred HHHHHHHHHhchhccccCcccCCcHHHHHHH
Confidence 46688999999999999887776655444
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=322.14 Aligned_cols=265 Identities=21% Similarity=0.182 Sum_probs=202.4
Q ss_pred hhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChh-----HHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccc
Q 009452 16 KQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDME-----LREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLA 90 (534)
Q Consensus 16 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-----~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~ 90 (534)
.+-...+|.|+||+|++.|+.+.+..++..++... ....+...+..|.||||+||..|+.+++++|++.+ .+.
T Consensus 8 ~~~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~ 85 (285)
T 3d9h_A 8 HHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQG--WAV 85 (285)
T ss_dssp ----------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTT--CCS
T ss_pred ccccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCC--CCC
Confidence 34456889999999999999888888776543210 01124567889999999999999999999999987 446
Q ss_pred cccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHH
Q 009452 91 GIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALH 170 (534)
Q Consensus 91 ~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 170 (534)
+.++.+|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|+++|+++. .+.+|.||||
T Consensus 86 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~ 162 (285)
T 3d9h_A 86 NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIH 162 (285)
T ss_dssp CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCHHH
T ss_pred CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCHHH
Confidence 77899999999999999999999999999887654 48999999999999999999999999998873 3456999999
Q ss_pred HHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HH
Q 009452 171 SAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QK 248 (534)
Q Consensus 171 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ 248 (534)
+|+..|+.+++++|++.++++... |..|.||||+|+..|+.+++++|++ .+.+++ .|..|+||||+|+..++. .+
T Consensus 163 ~A~~~g~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~-~~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAYGGNIDHK-ISHLGTPLYLACENQQRACVKKLLE-SGADVN-QGKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCC-BTTTBCHHHHHHHTTCHHHHHHHHH-TTCCTT-CCBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHH-CCCCCC-CCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999987654 8899999999999999999999999 466677 489999999999999986 68
Q ss_pred HhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhc-CCCC
Q 009452 249 LLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEH-GVPC 290 (534)
Q Consensus 249 ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~-g~~~ 290 (534)
+|+..|++++.+|..|+||+++|+ ++.+++++|+++ |++.
T Consensus 240 ~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 240 LLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASL 280 (285)
T ss_dssp HHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC----
T ss_pred HHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCC
Confidence 889999999999999999999999 557899999988 6654
No 7
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-39 Score=332.20 Aligned_cols=261 Identities=18% Similarity=0.228 Sum_probs=225.6
Q ss_pred hhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcC-CCCCcHHHHHHHcCCHHHHHHHH--------HhCC
Q 009452 16 KQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMN-QSGETALYVAAEYGYVDMVREMI--------RYHD 86 (534)
Q Consensus 16 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n-~~g~T~Lh~Aa~~g~~~iv~~Ll--------~~~~ 86 (534)
....+..|.||||.|+..|+ ++++.|+... ++..+ ..|.||||+|+..|+.+++++|+ +.+
T Consensus 87 ~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~~--------~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~g- 156 (373)
T 2fo1_E 87 PTEPEPESPIKLHTEAAGSY-AITEPITRES--------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG- 156 (373)
T ss_dssp -------CCCHHHHHHHSSS-CCCSCCSTTT--------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC-
T ss_pred ccCCCCCCccHHHHHhcCCc-hHHHHhcccc--------ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcC-
Confidence 34567899999999999665 7777776532 34556 68999999999999998888876 555
Q ss_pred cccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcC---CCchhhhhc
Q 009452 87 TSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKG---STLATIARS 163 (534)
Q Consensus 87 ~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~---~~~~~~~~~ 163 (534)
.+.+..|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|++++ .++ ...+.
T Consensus 157 -a~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~ 233 (373)
T 2fo1_E 157 -ADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDR 233 (373)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCT
T ss_pred -CCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCC
Confidence 45677899999999999999999999999999988754 4899999999999999999999999987 454 55788
Q ss_pred CCCcHHHHHHHcC---cHHHHHHHHhcCCCCcc-------cCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCC
Q 009452 164 NGKTALHSAARNG---HLEIVKALLSKEPGIVL-------RNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKG 233 (534)
Q Consensus 164 ~g~tpLh~A~~~g---~~~iv~~Ll~~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G 233 (534)
.|.||||+|+..| +.+++++|++.++++.. ..|..|.||||+|+..|+.+++++|++..+.+++.+|.+|
T Consensus 234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g 313 (373)
T 2fo1_E 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 313 (373)
T ss_dssp TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC
T ss_pred CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCC
Confidence 9999999999998 99999999999998764 2467899999999999999999999997778999999999
Q ss_pred CcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCC
Q 009452 234 NSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVP 289 (534)
Q Consensus 234 ~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~ 289 (534)
+||||+|+..|+. .++|+..|++++..|..|.|||++|+..|+.+++++|+++|++
T Consensus 314 ~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 314 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999986 6889999999999999999999999999999999999999875
No 8
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1e-38 Score=325.14 Aligned_cols=265 Identities=19% Similarity=0.188 Sum_probs=226.3
Q ss_pred HHHhhhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCccccc
Q 009452 12 KKMKKQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAG 91 (534)
Q Consensus 12 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~ 91 (534)
.++.....|..|.||||+|++.|+.++|++|++.+.+. +..|..|.||||+|+..|+.++|++|++.+. .
T Consensus 9 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~ 78 (364)
T 3ljn_A 9 PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP------TIQNRFGCTALHLACKFGCVDTAKYLASVGE----V 78 (364)
T ss_dssp -------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT------TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC----C
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc------cccCCCCCcHHHHHHHcCCHHHHHHHHHCCC----C
Confidence 34556677889999999999999999999999998764 5678999999999999999999999999985 3
Q ss_pred ccccCCCcHHHHHHHCCCHHHHHHHHhh----Cccccc----------------cCCCCCCcHHHHHHhcC--CHHHHHH
Q 009452 92 IKARNGYDAFHIAAKQGCLEVLKILMEA----LPELLM----------------TFDSSNTTALHTASSQG--HVEVVKF 149 (534)
Q Consensus 92 ~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~----~~~~~~----------------~~d~~g~tpLh~A~~~g--~~~~v~~ 149 (534)
..+.+|.||||+|+..|+.+++++|++. +.+... ..|..|.||||+|+..| +.+++++
T Consensus 79 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~ 158 (364)
T 3ljn_A 79 HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKI 158 (364)
T ss_dssp CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 3445899999999999999999999998 444332 14778999999999999 9999999
Q ss_pred HHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCC----cccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCcc
Q 009452 150 LLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGI----VLRNDKKGQTALHMAVKGQSIELVDELVKVEPVI 225 (534)
Q Consensus 150 Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~----~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~ 225 (534)
|+++|+++ ...|..|.||||+|+..|+.+++++|++++++. ....|..|.||||+|+..|+.+++++|++ .+.+
T Consensus 159 Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad 236 (364)
T 3ljn_A 159 LVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE-MGID 236 (364)
T ss_dssp HHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCC
T ss_pred HHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 99999997 667889999999999999999999999999882 33458899999999999999999999999 6788
Q ss_pred ccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHh------------hhccCCcHHHHHHhcCchhHHHHHHhcCC
Q 009452 226 INMVDAKGNSALHIATRKGRV--QKLLNINGVDKAV------------INKSRETALDTAEKTGHSEIGVILKEHGV 288 (534)
Q Consensus 226 in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~------------~n~~g~T~l~~A~~~~~~~i~~~L~~~g~ 288 (534)
++.+|.+|.||||+|+..|+. .++|+..|++++. .+..+.||+..|+..++.+.+..|++.++
T Consensus 237 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~ 313 (364)
T 3ljn_A 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKL 313 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHH
Confidence 999999999999999999986 6888888887755 45678899999999988877777766553
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.3e-37 Score=312.45 Aligned_cols=274 Identities=24% Similarity=0.297 Sum_probs=235.0
Q ss_pred hhhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccc
Q 009452 15 KKQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKA 94 (534)
Q Consensus 15 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 94 (534)
....++..+.++||.|++.|+.+.|+.++..... .++..|..|.||||+|+..|+.+++++|++.+ .+.+.++
T Consensus 16 ~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~-----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~ 88 (351)
T 3utm_A 16 KAVLTGEYKKDELLEAARSGNEEKLMALLTPLNV-----NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG--ADVHAKD 88 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTT-----TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCC
T ss_pred eeeeeccccchhHHHHHHcCCHHHHHHHHHhcCC-----CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccC
Confidence 3456677888999999999999999999986431 24567889999999999999999999999987 4566788
Q ss_pred cCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHH--
Q 009452 95 RNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSA-- 172 (534)
Q Consensus 95 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A-- 172 (534)
..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...+..|.+|++.|
T Consensus 89 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 89 KGGLVPLHNACSYGHYEVTELLLKHGACVNA-MDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPT 166 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSS
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhh
Confidence 9999999999999999999999999887654 4899999999999999999999999999987 56788888887764
Q ss_pred -------------------HHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhC---CCHHHHHHHhhcCCccccccC
Q 009452 173 -------------------ARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKG---QSIELVDELVKVEPVIINMVD 230 (534)
Q Consensus 173 -------------------~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~---~~~~iv~~Ll~~~~~~in~~d 230 (534)
+..++.+.++.++..... ....+..|.||||.|+.. +..+++++|++ .+.+++.+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~ 244 (351)
T 3utm_A 167 PELRERLTYEFKGHSLLQAAREADLAKVKKTLALEII-NFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKN 244 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCT-TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCC
T ss_pred hhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcc-cccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcC
Confidence 556666777777766543 334578899999999998 56899999998 677899999
Q ss_pred CCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCCCCCCccc
Q 009452 231 AKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGKSIKPQAN 299 (534)
Q Consensus 231 ~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~~~~~~~~ 299 (534)
.+|+||||+|+..|+. .++|+..|++++.+|..|+|||++|+..|+.+++++|+++|+++.........
T Consensus 245 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t 315 (351)
T 3utm_A 245 KDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT 315 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 9999999999999986 68889999999999999999999999999999999999999987665544433
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.1e-37 Score=294.87 Aligned_cols=231 Identities=24% Similarity=0.282 Sum_probs=183.4
Q ss_pred HHhcCCCCCcHHHHHHHcCCHHHHHHHHHh--CCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCC
Q 009452 55 LSKMNQSGETALYVAAEYGYVDMVREMIRY--HDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNT 132 (534)
Q Consensus 55 l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~--~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 132 (534)
++.+|.+|.||||+|+..|+.+++++|++. ..+...+..+..|.||||+|+..|+.+++++|++.+.+... .|..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCC
Confidence 355678888888888888888888888872 11245566778888899988888888888888888876544 478888
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCC----CchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHh
Q 009452 133 TALHTASSQGHVEVVKFLLEKGS----TLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVK 208 (534)
Q Consensus 133 tpLh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 208 (534)
||||+|+..|+.+++++|++.++ ++ ...+..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+.
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 89999998889999998888876 33 55677888999999999999999999988888776544788899999999
Q ss_pred CCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhc
Q 009452 209 GQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEH 286 (534)
Q Consensus 209 ~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~ 286 (534)
.|+.+++++|++ .+.+++.+|.+|+||||+|+..++. .++|+..|++++.+|..|.||+++|+..|+.++++.|.+.
T Consensus 160 ~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 160 NNSLSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp TTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred cCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 999999999988 5677888899999999999988875 6788888999999999999999999999999999888776
Q ss_pred CC
Q 009452 287 GV 288 (534)
Q Consensus 287 g~ 288 (534)
++
T Consensus 239 ~a 240 (241)
T 1k1a_A 239 PA 240 (241)
T ss_dssp --
T ss_pred CC
Confidence 54
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.5e-37 Score=298.71 Aligned_cols=213 Identities=22% Similarity=0.256 Sum_probs=151.9
Q ss_pred cCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHH
Q 009452 72 YGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLL 151 (534)
Q Consensus 72 ~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 151 (534)
.++.+++++|++.+... ....+..|.||||+|+..|+.+++++|++++++... .|..|.||||+|+..|+.+++++|+
T Consensus 33 ~~~~~~v~~Ll~~g~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll 110 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASL-HNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILI 110 (253)
T ss_dssp --------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCChHHHHHHHHccCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 33777888888766432 233467788888888888888888888887776543 3777888888888888888888888
Q ss_pred hcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCC
Q 009452 152 EKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDA 231 (534)
Q Consensus 152 ~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~ 231 (534)
++++......+..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|+.+++++|++ .+.+++.+|.
T Consensus 111 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~ 188 (253)
T 1yyh_A 111 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNN 188 (253)
T ss_dssp HSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCT
T ss_pred HcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCC
Confidence 8876444666777888888888888888888888887776544 6778888888888888888888887 5667788888
Q ss_pred CCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCC
Q 009452 232 KGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGV 288 (534)
Q Consensus 232 ~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~ 288 (534)
.|+||||+|+..++. .++|+..|++++..|..|.||+++|+..|+.+++++|.....
T Consensus 189 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 189 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 888888888888875 577788888888888888999999999999999998876543
No 12
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.7e-36 Score=287.90 Aligned_cols=219 Identities=24% Similarity=0.364 Sum_probs=178.1
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccC
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARN 96 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 96 (534)
+.+|..|.||||.|++.|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+. ..+.++..
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~ 76 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI------DTCSEDQRTPLMEAAENNHLEAVKYLIKAGA--LVDPKDAE 76 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC--CCCCCCTT
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc------CccCCCCCCHHHHHHHhCCHHHHHHHHhCCC--CCCCCCCC
Confidence 467788888888888888888888888887653 4557788888888888888888888888763 45556778
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcC
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNG 176 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 176 (534)
|.||||+|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSG 155 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCC
Confidence 8888888888888888888888876555666788888888888888888888888888876 556778888888888888
Q ss_pred cHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH
Q 009452 177 HLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV 246 (534)
Q Consensus 177 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~ 246 (534)
+.+++++|++.++++... |..|.||||+|++.++.+++++|++ .+.+++.+|.+|+||||+|+..++.
T Consensus 156 ~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAV-NIHGDSPLHIAARENRYDCVVLFLS-RDSDVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp CHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHSCTTCHH
T ss_pred CHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHhCCHhHHHHHHH-cCCCCCccCCCCCCHHHHHHHHHHH
Confidence 888888888888876544 7788888888888888888888887 5667788888888888888887765
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.2e-37 Score=294.71 Aligned_cols=226 Identities=22% Similarity=0.258 Sum_probs=174.2
Q ss_pred hhcCCCCCCcHHHHHHHcC-------------CHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHH
Q 009452 16 KQLTAKRDDTPLQSLVRTG-------------SVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMI 82 (534)
Q Consensus 16 ~~~~~~~g~t~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll 82 (534)
.+.+|.+|.||||.|+..| +.++++.|++.+.+. ....|..|.||||+|+..|+.+++++|+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL-----HNQTDRTGETALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp ------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc-----ccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3567899999999999987 899999999998642 3456889999999999999999999999
Q ss_pred HhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhh
Q 009452 83 RYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIAR 162 (534)
Q Consensus 83 ~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 162 (534)
+.+ .+.+..+..|.||||+|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|++.|+++ ...|
T Consensus 78 ~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d 154 (253)
T 1yyh_A 78 EAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVD 154 (253)
T ss_dssp HTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBC
T ss_pred HcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcC
Confidence 987 4566788999999999999999999999999988666677999999999999999999999999999987 6678
Q ss_pred cCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHH
Q 009452 163 SNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATR 242 (534)
Q Consensus 163 ~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~ 242 (534)
..|.||||+|+..|+.+++++|+++++++... |..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+.
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~ 232 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ-NNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQE 232 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHCCCHHHHHHHHH-cCCCccccccCCCCHHHHHHH
Confidence 89999999999999999999999999987654 8999999999999999999999999 677899999999999999999
Q ss_pred cCcH--HHHhh
Q 009452 243 KGRV--QKLLN 251 (534)
Q Consensus 243 ~~~~--~~ll~ 251 (534)
.|+. ..++.
T Consensus 233 ~g~~~i~~~l~ 243 (253)
T 1yyh_A 233 RMHHDIVRLLD 243 (253)
T ss_dssp TTCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 9986 34444
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.5e-37 Score=298.86 Aligned_cols=252 Identities=19% Similarity=0.172 Sum_probs=187.4
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccC
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARN 96 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 96 (534)
...|..|.||||+|++.|+.++|++|++.+.+. ..++.++..|.||||+|+..|+.+++++|++.+ ...+.++..
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~ 77 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH---EYLDLQNDLGQTALHLAAILGEASTVEKLYAAG--AGVLVAERG 77 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS---GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTT
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---ccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCC
Confidence 457899999999999999999999999988763 235678899999999999999999999999987 445678889
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCccccc------------cCCCCCCcHHHHHHhcCCHHHHH-HHHhcCCCchhhhhc
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPELLM------------TFDSSNTTALHTASSQGHVEVVK-FLLEKGSTLATIARS 163 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~------------~~d~~g~tpLh~A~~~g~~~~v~-~Ll~~~~~~~~~~~~ 163 (534)
|.||||+|+..|+.+++++|+++++.... .....+.++++.++..+...... .+...+.++ ...+.
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 156 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAENY 156 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGT-TCCCT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC-CCcCC
Confidence 99999999999999999999998765321 11334667777776655443333 333344444 55788
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHc
Q 009452 164 NGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRK 243 (534)
Q Consensus 164 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~ 243 (534)
.|.||||+|+..|+.+++++|+++++++....+..|+||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTS
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHc
Confidence 899999999999999999999999999877644569999999999999999999999 5788999999999999999999
Q ss_pred CcH--HHHhhhcCCChHhhhccCCcHHHHHHhcC
Q 009452 244 GRV--QKLLNINGVDKAVINKSRETALDTAEKTG 275 (534)
Q Consensus 244 ~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~ 275 (534)
++. .++|+.+|++++.+|..|.||+++|....
T Consensus 236 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 236 PNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp SCHHHHHHHHHTTCCCCCCC--------------
T ss_pred CCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 986 68999999999999999999999987554
No 15
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-35 Score=290.61 Aligned_cols=233 Identities=26% Similarity=0.338 Sum_probs=211.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCc
Q 009452 20 AKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYD 99 (534)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 99 (534)
+..|.||||+|++.|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+ ...+..+..|.|
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t 107 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADP------VLRKKNGATPFLLAAIAGSVKLLKLFLSKG--ADVNECDFYGFT 107 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCBCTTCCB
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------cccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCcccCC
Confidence 677899999999999999999999998764 456889999999999999999999999987 445677889999
Q ss_pred HHHHHHHCCCHHHHHHHHhhCccccccC---------CCCCCcHHHHHHhcCCHHHHHHHHhc-CCCchhhhhcCCCcHH
Q 009452 100 AFHIAAKQGCLEVLKILMEALPELLMTF---------DSSNTTALHTASSQGHVEVVKFLLEK-GSTLATIARSNGKTAL 169 (534)
Q Consensus 100 ~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~---------d~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL 169 (534)
|||+|+..|+.+++++|++.+++..... +..|.||||+|+..|+.+++++|++. +.++ ...+..|.|||
T Consensus 108 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l 186 (285)
T 1wdy_A 108 AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNAL 186 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHH
T ss_pred HHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHH
Confidence 9999999999999999999988764332 67899999999999999999999998 7776 66788999999
Q ss_pred HHHHHcCc----HHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCc
Q 009452 170 HSAARNGH----LEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGR 245 (534)
Q Consensus 170 h~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~ 245 (534)
|.|+..|+ .+++++|++.+.++... |..|.||||+|+..|+.+++++|++..+.+++.+|.+|+||||+|+..++
T Consensus 187 ~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~ 265 (285)
T 1wdy_A 187 IHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 265 (285)
T ss_dssp HHHHHCSCTTTHHHHHHHHHHTTCCSSCC-CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHccccchHHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCc
Confidence 99999999 99999999999987654 88999999999999999999999997888999999999999999999998
Q ss_pred H--HHHhhhcCCChHhhhc
Q 009452 246 V--QKLLNINGVDKAVINK 262 (534)
Q Consensus 246 ~--~~ll~~~g~~~~~~n~ 262 (534)
. .++|+++|++++.+|.
T Consensus 266 ~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 266 KKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHHHHHHHSSCSCCSSC
T ss_pred HHHHHHHHHcCCCCCcccc
Confidence 6 6899999999988763
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.4e-36 Score=285.30 Aligned_cols=224 Identities=27% Similarity=0.337 Sum_probs=202.3
Q ss_pred HhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHH
Q 009452 56 SKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTAL 135 (534)
Q Consensus 56 ~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 135 (534)
+..+..|.||||+|+..|+.+++++|++.+. ..+..+..|.||||+|+..|+.+++++|++.+.+... .|..|.|||
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L 81 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGA--NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTCL 81 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCC--CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcHH
Confidence 4567899999999999999999999999874 4566788999999999999999999999999887654 488999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHH
Q 009452 136 HTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELV 215 (534)
Q Consensus 136 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv 215 (534)
|+|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.++++.. .|..|.||||.|+..|+.+++
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~ 160 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI-RDNEENICLHWAAFSGCVDIA 160 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHHCCCHHHH
Confidence 9999999999999999999544477888999999999999999999999999998765 488999999999999999999
Q ss_pred HHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHH
Q 009452 216 DELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILK 284 (534)
Q Consensus 216 ~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~ 284 (534)
++|++ .+.+++.+|..|.||||+|+..++. .++|+.+|++++.+|..|.||+++|+..++.+.+..+.
T Consensus 161 ~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 161 EILLA-AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999 5678999999999999999999986 68889999999999999999999999999875544443
No 17
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.7e-35 Score=297.24 Aligned_cols=256 Identities=22% Similarity=0.264 Sum_probs=223.4
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCC
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNG 97 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g 97 (534)
..|..|.||||+|+..|+.++|++|++.+.+. +..|..|.||||+|+..|+.+++++|++.+ ...+..+..|
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g--~~~~~~~~~g 124 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV------HAKDKGGLVPLHNACSYGHYEVTELLLKHG--ACVNAMDLWQ 124 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------CccCCCCCcHHHHHHHCCCHHHHHHHHHCC--CCCCCCCCCC
Confidence 46788999999999999999999999998764 566899999999999999999999999987 4456688899
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHH---------------------HhcCCHHHHHHHHhcCCC
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTA---------------------SSQGHVEVVKFLLEKGST 156 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A---------------------~~~g~~~~v~~Ll~~~~~ 156 (534)
.||||+|+..|+.+++++|++++++.... +..|.||+++| +..++.+.++.++..+..
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 203 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLV-NCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEII 203 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccc-cCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcc
Confidence 99999999999999999999998876544 88899998765 556677777777776544
Q ss_pred chhhhhcCCCcHHHHHHHc---CcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCC
Q 009452 157 LATIARSNGKTALHSAARN---GHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKG 233 (534)
Q Consensus 157 ~~~~~~~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G 233 (534)
. ...+..|.||||+|+.. +..+++++|++.+.++... |..|+||||+|+..|+.+++++|++ .+.++|.+|..|
T Consensus 204 ~-~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~n~~d~~g 280 (351)
T 3utm_A 204 N-FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK-NKDFMTPLHVAAERAHNDVMEVLHK-HGAKMNALDSLG 280 (351)
T ss_dssp T-CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTS
T ss_pred c-ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc-CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCC
Confidence 3 44567899999999999 6689999999999987654 8899999999999999999999999 678899999999
Q ss_pred CcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCC
Q 009452 234 NSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVP 289 (534)
Q Consensus 234 ~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~ 289 (534)
+||||+|+..++. .++|+..|++++..|..|.||+++| +.++.++|.+.+..
T Consensus 281 ~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 281 QTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 9999999999986 6899999999999999999999998 56788888877654
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.6e-36 Score=285.84 Aligned_cols=212 Identities=25% Similarity=0.343 Sum_probs=116.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCc
Q 009452 20 AKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYD 99 (534)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 99 (534)
+..+++|||.|++.|+.+.++++++.++. .++..+..|.||||+|+..|+.+++++|++.+ ...+.++..|.|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t 75 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKS-----LATRTDQDSRTALHWACSAGHTEIVEFLLQLG--VPVNDKDDAGWS 75 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGG-----GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCC
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchh-----hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC--CCCCCcCCCCCC
Confidence 34455666666666666666666665432 23455555666666666666666666666554 233445555666
Q ss_pred HHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHH
Q 009452 100 AFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLE 179 (534)
Q Consensus 100 ~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 179 (534)
|||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|.++ ...+..|.||||+|+..|+.+
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHH
Confidence 66666666666666666665554432 2555556666666666666666665555554 334455555555555555555
Q ss_pred HHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHH
Q 009452 180 IVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATR 242 (534)
Q Consensus 180 iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~ 242 (534)
++++|++.+.++... |..|+||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+.
T Consensus 154 ~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 154 MVHILLFYKASTNIQ-DTEGNTPLHLACDEERVEEAKFLVT-QGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHSCH
T ss_pred HHHHHHhcCCCcccc-CCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHh
Confidence 555555555554332 4555555555555555555555555 234444444444444444443
No 19
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=296.03 Aligned_cols=227 Identities=19% Similarity=0.203 Sum_probs=202.8
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCC
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNG 97 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g 97 (534)
..|..|.||||+|+..|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.+ .+.+.++..|
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~g 125 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWA------VNIITADHVSPLHEACLGGHLSCVKILLKHG--AQVNGVTADW 125 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC------SCEECTTCCCHHHHHHHTTCHHHHHHHHHTT--CCSSCCCTTC
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC--CCCCCCCCCC
Confidence 4678899999999999999999999999876 3567899999999999999999999999986 4566788999
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCc
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGH 177 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~ 177 (534)
.||||+|+..|+.+++++|++.+++... +..|.||||+|+..|+.+++++|+++|+++ ...|..|.||||+|+..|+
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTC
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 9999999999999999999999887653 456999999999999999999999999987 6678899999999999999
Q ss_pred HHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcHHHHhhhc-CCC
Q 009452 178 LEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQKLLNIN-GVD 256 (534)
Q Consensus 178 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~-g~~ 256 (534)
.+++++|++.++++. .|..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+....+.++|+.+ |++
T Consensus 203 ~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 203 RACVKKLLESGADVN--QGKGQDSPLHAVVRTASEELACLLMD-FGADTQAKNAEGKRPVELVPPESPLAQLFLEREGAS 279 (285)
T ss_dssp HHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTSHHHHHHHHHC---
T ss_pred HHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHhcCccHHHHHHHHhhccC
Confidence 999999999999877 37899999999999999999999999 67889999999999999999877777777665 766
Q ss_pred hH
Q 009452 257 KA 258 (534)
Q Consensus 257 ~~ 258 (534)
+.
T Consensus 280 l~ 281 (285)
T 3d9h_A 280 LP 281 (285)
T ss_dssp --
T ss_pred CC
Confidence 54
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.7e-36 Score=285.09 Aligned_cols=226 Identities=27% Similarity=0.303 Sum_probs=207.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHH
Q 009452 59 NQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTA 138 (534)
Q Consensus 59 n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 138 (534)
+..++||||.|+..|+.+.+++|++.+. ...+..+..|.||||+|+..|+.+++++|++.+.++.. .|..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADK-SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCG-GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhch-hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHH
Confidence 3568899999999999999999999763 34567789999999999999999999999999887654 488999999999
Q ss_pred HhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q 009452 139 SSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDEL 218 (534)
Q Consensus 139 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 218 (534)
+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.+++++|++++.++.. .|..|.||||.|+..|+.+++++|
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-KDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHH
Confidence 9999999999999999987 66788999999999999999999999999988765 488999999999999999999999
Q ss_pred hhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCC
Q 009452 219 VKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVP 289 (534)
Q Consensus 219 l~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~ 289 (534)
++ .+.+++.+|..|+||||+|+..++. .++|+..|++++..|..|.||+++|...++.+++++|.++|++
T Consensus 159 l~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 159 LF-YKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred Hh-cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 99 6778999999999999999999986 6889999999999999999999999999999999999998875
No 21
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.8e-36 Score=284.97 Aligned_cols=214 Identities=25% Similarity=0.336 Sum_probs=145.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccc-cccCCCcHH
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGI-KARNGYDAF 101 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~-~~~~g~t~L 101 (534)
|+||||.|++.|+.++++.|++.+++. ....+..|.||||+|+..|+.+++++|++.+....... .+..|.|||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL-----LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPF 76 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc-----cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHH
Confidence 567777777777777777777776432 23456677777777777777777777777764444444 566777777
Q ss_pred HHHHHCCCHHHHHHHHhhC--ccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHH
Q 009452 102 HIAAKQGCLEVLKILMEAL--PELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLE 179 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~--~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 179 (534)
|+|+..|+.+++++|++++ ++. ...|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.+
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHH
Confidence 7777777777777777766 333 334667777777777777777777777777665 455666777777777777777
Q ss_pred HHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHc
Q 009452 180 IVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRK 243 (534)
Q Consensus 180 iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~ 243 (534)
++++|++.++......|..|+||||+|+..|+.+++++|++..+.+++.+|.+|.||||+|+..
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 7777777773333344667777777777777777777777335566677777777777776543
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.4e-36 Score=285.78 Aligned_cols=220 Identities=24% Similarity=0.311 Sum_probs=194.6
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHH----hcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccc
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMIS----SYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGI 92 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~ 92 (534)
..+|.+|.||||+|++.|+.+++++|++ .+.+ ++..|..|.||||+|+..|+.+++++|++.+. ..+.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~ 74 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE------LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA--SPMA 74 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC------CCcccccCCCHHHHHHHcCCHHHHHHHHHcCC--Cccc
Confidence 4578999999999999999999999997 3433 45668899999999999999999999999874 4566
Q ss_pred cccCCCcHHHHHHHCCCHHHHHHHHhhCcc---ccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHH
Q 009452 93 KARNGYDAFHIAAKQGCLEVLKILMEALPE---LLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTAL 169 (534)
Q Consensus 93 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL 169 (534)
.+..|.||||+|+..|+.+++++|++.++. .....|..|.||||+|+..|+.+++++|+++|+++....+..|.|||
T Consensus 75 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L 154 (241)
T 1k1a_A 75 LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL 154 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHH
Confidence 788999999999999999999999999872 33455889999999999999999999999999998544337899999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH
Q 009452 170 HSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV 246 (534)
Q Consensus 170 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~ 246 (534)
|+|+..|+.+++++|+++++++... |..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..++.
T Consensus 155 ~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~ 229 (241)
T 1k1a_A 155 IHAVENNSLSMVQLLLQHGANVNAQ-MYSGSSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRVI 229 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCTTTTCSSHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCcCCCCCCHHHHHHhcCcH
Confidence 9999999999999999999987654 8999999999999999999999999 6778999999999999999988875
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=289.10 Aligned_cols=220 Identities=24% Similarity=0.258 Sum_probs=196.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHh
Q 009452 61 SGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASS 140 (534)
Q Consensus 61 ~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 140 (534)
+|.||||+|+..|+.+++++|++.+ .+.+..+.+|.||||+|+..|+.+++++|++++.+... .|..|.||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHH
Confidence 5899999999999999999999987 45677889999999999999999999999999887654 48999999999999
Q ss_pred cCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 141 QGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 141 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
.|+.+++++|+++|+++. .+.+|.||||+|+..|+.+++++|+++++++... |..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHK-ISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-BTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcC-CCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999874 3566999999999999999999999999987654 8899999999999999999999999
Q ss_pred cCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCC
Q 009452 221 VEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPC 290 (534)
Q Consensus 221 ~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~ 290 (534)
. +.+++. |..|+||||+|+..++. .++|++.|+|++.+|..|+||+++|+.. .+++++|++.+.+.
T Consensus 156 ~-g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~ 223 (261)
T 2xai_A 156 S-GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPP 223 (261)
T ss_dssp H-TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCC
T ss_pred c-CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCc
Confidence 4 566774 89999999999999986 6889999999999999999999999954 45899999886653
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-37 Score=297.53 Aligned_cols=242 Identities=22% Similarity=0.289 Sum_probs=171.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCChh--HHHHHHhcCCCCCcHHHHHHHcCCHH-HHHHHHHhCCccccccccc
Q 009452 19 TAKRDDTPLQSLVRTGSVELVLDMISSYGDME--LREMLSKMNQSGETALYVAAEYGYVD-MVREMIRYHDTSLAGIKAR 95 (534)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~~l~~~n~~g~T~Lh~Aa~~g~~~-iv~~Ll~~~~~~~~~~~~~ 95 (534)
.|.++.++|+.|++.|+.++|++|++.+.+.. ....++..+..|.||||.|+..++.+ +++.|++.| .+++.+|.
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G--advn~~d~ 84 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASG--LGVNVTSQ 84 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CC--CCTTCCCT
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCC--CCCCCcCC
Confidence 46667899999999999999999999876431 12235667788999999999888764 788899877 45677889
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHc
Q 009452 96 NGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARN 175 (534)
Q Consensus 96 ~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 175 (534)
+|+||||+|+..|+.+++++|++.+++... .+..|.||+|+|+..++.+++++|++.|+++ +..|..|.||||+|+..
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSG 162 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHC
Confidence 999999999999999999999999887654 4889999999999999999999999999987 66788999999999999
Q ss_pred CcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcHHHHhhhcCC
Q 009452 176 GHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQKLLNINGV 255 (534)
Q Consensus 176 g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~ 255 (534)
|+.+++++|+++|++++.. |..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|++++++..+|...+.
T Consensus 163 g~~~~v~~Ll~~gadvn~~-~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~ 240 (269)
T 4b93_B 163 GHHELVALLLQHGASINAS-NNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPS 240 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---
T ss_pred CCHHHHHHHHHCCCCCCcc-ccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHH
Confidence 9999999999999987654 8899999999999999999999998 6778999999999999999988887666655444
Q ss_pred ChHhhhccCCc
Q 009452 256 DKAVINKSRET 266 (534)
Q Consensus 256 ~~~~~n~~g~T 266 (534)
..+..|..+.|
T Consensus 241 ~~~~~~~~~~t 251 (269)
T 4b93_B 241 CVASLDDVAET 251 (269)
T ss_dssp -----------
T ss_pred hchhhhhccCC
Confidence 44444444433
No 25
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.4e-36 Score=305.07 Aligned_cols=229 Identities=24% Similarity=0.265 Sum_probs=205.5
Q ss_pred HhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHH
Q 009452 56 SKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTAL 135 (534)
Q Consensus 56 ~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 135 (534)
...|..|.||||+||..|+.++|++|++.+ .+.+..+..|.||||+|+..|+.+++++|++.+++.. +.+|.|||
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~g~t~L 88 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS---LWHGQKPI 88 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC---CBTTBCHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc---ccCCCCHH
Confidence 445778999999999999999999999987 4567789999999999999999999999999998432 45899999
Q ss_pred HHHHhcCCHHHHHHHHhc----CCCchh----------------hhhcCCCcHHHHHHHcC--cHHHHHHHHhcCCCCcc
Q 009452 136 HTASSQGHVEVVKFLLEK----GSTLAT----------------IARSNGKTALHSAARNG--HLEIVKALLSKEPGIVL 193 (534)
Q Consensus 136 h~A~~~g~~~~v~~Ll~~----~~~~~~----------------~~~~~g~tpLh~A~~~g--~~~iv~~Ll~~~~~~~~ 193 (534)
|+|+..|+.+++++|++. +.++.. ..+..|.||||+|+..| +.+++++|++.+.++..
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~ 168 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA 168 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc
Confidence 999999999999999999 777632 16778999999999999 99999999999998765
Q ss_pred cCCCCCCcHHHHHHhCCCHHHHHHHhhcCCc----cccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcH
Q 009452 194 RNDKKGQTALHMAVKGQSIELVDELVKVEPV----IINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETA 267 (534)
Q Consensus 194 ~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~----~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~ 267 (534)
. |..|.||||+|+..|+.+++++|++.... +++.+|..|+||||+|+..|+. .++|+..|++++..|..|.||
T Consensus 169 ~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp 247 (364)
T 3ljn_A 169 K-DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVP 247 (364)
T ss_dssp C-CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred c-CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 4 89999999999999999999999994332 2899999999999999999986 689999999999999999999
Q ss_pred HHHHHhcCchhHHHHHHhcCCCC
Q 009452 268 LDTAEKTGHSEIGVILKEHGVPC 290 (534)
Q Consensus 268 l~~A~~~~~~~i~~~L~~~g~~~ 290 (534)
|++|+..|+.+++++|+++|++.
T Consensus 248 L~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 248 LYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHHHHhChHHHHHHHHHcCCch
Confidence 99999999999999999998753
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.3e-35 Score=279.60 Aligned_cols=218 Identities=24% Similarity=0.274 Sum_probs=194.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhC--ccccccCCCCCCcHHHHHH
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEAL--PELLMTFDSSNTTALHTAS 139 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~--~~~~~~~d~~g~tpLh~A~ 139 (534)
|+||||+|+..|+.+++++|++.+.. .....+..|.||||+|+..|+.+++++|++.+ ++.....|..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPS-LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGG-GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcc-ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 78999999999999999999998743 34457889999999999999999999999998 6655546899999999999
Q ss_pred hcCCHHHHHHHHhcC--CCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHH
Q 009452 140 SQGHVEVVKFLLEKG--STLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDE 217 (534)
Q Consensus 140 ~~g~~~~v~~Ll~~~--~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~ 217 (534)
..|+.+++++|+++| +++ ...+..|.||||.|+..|+.+++++|++++.++... |..|.||||+|+..|+.+++++
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIK-DKFNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999998 665 567888999999999999999999999999887654 8899999999999999999999
Q ss_pred HhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhh-hcCCChHhhhccCCcHHHHHHhcCchhHHHHHHh
Q 009452 218 LVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLN-INGVDKAVINKSRETALDTAEKTGHSEIGVILKE 285 (534)
Q Consensus 218 Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~-~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~ 285 (534)
|++.++.+++.+|..|+||||+|+..++. .++|+ ..|++++..|..|.||+++|... ++.++|++
T Consensus 159 Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 99966688999999999999999999986 56666 89999999999999999999754 56666654
No 27
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.4e-35 Score=277.31 Aligned_cols=229 Identities=24% Similarity=0.279 Sum_probs=199.9
Q ss_pred hcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHH
Q 009452 57 KMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALH 136 (534)
Q Consensus 57 ~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 136 (534)
..|..|.||||.|+..|+.+++++|++.+ .+.+..+..|.||||+|+..|+.+++++|++.+++.....+..|.||||
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 45778899999999999999999999977 4456678889999999999999999999999998887776777999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCC-HHHH
Q 009452 137 TASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQS-IELV 215 (534)
Q Consensus 137 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~-~~iv 215 (534)
+|+..|+.+++++|++.|+++ ...+..|.||||.|+..|+.+++++|+++++++.. .+..|.||||.|+..++ .+++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM-MDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCSSTTH
T ss_pred HHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc-cCCCCCcHHHHHHHhCChHHHH
Confidence 999999999999999999887 56788899999999999999999999999888664 47899999999996655 7888
Q ss_pred HHHhhcCCccccccCC-CCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCC
Q 009452 216 DELVKVEPVIINMVDA-KGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPC 290 (534)
Q Consensus 216 ~~Ll~~~~~~in~~d~-~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~ 290 (534)
++|++ .+.+++..+. .|+||||+|+..++. .++|+..|++++..|..|.||+++|+..|+.+++++|+++|+..
T Consensus 160 ~~L~~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 160 RLLLT-FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHH-TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHh-cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 88888 6667888886 899999999999986 68888899999999999999999999999999999999988764
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.5e-34 Score=287.69 Aligned_cols=229 Identities=23% Similarity=0.334 Sum_probs=192.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccc-cCCCcHHHHHHHCCCHHHHHHHHhhCcccc-------------
Q 009452 59 NQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKA-RNGYDAFHIAAKQGCLEVLKILMEALPELL------------- 124 (534)
Q Consensus 59 n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~------------- 124 (534)
+.+|+||||.|++.|+.++|++||+.|.+ ++.++ ..|+||||+|+..|+.+++++|++++++..
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCC--CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 34578999999999999999999999844 45455 459999999999999999999999876532
Q ss_pred -------------------ccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchh---------hhhcCCCcHHHHHHHcC
Q 009452 125 -------------------MTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLAT---------IARSNGKTALHSAARNG 176 (534)
Q Consensus 125 -------------------~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~~g~tpLh~A~~~g 176 (534)
+..|..|.||||+|+..|+.+++++|+++|+++.. ..+..|.||||+|+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 33478899999999999999999999999887632 23456899999999999
Q ss_pred cHHHHHHHHhc-CCCCcccCCCCCCcHHHHHHhCCC----HHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH---HH
Q 009452 177 HLEIVKALLSK-EPGIVLRNDKKGQTALHMAVKGQS----IELVDELVKVEPVIINMVDAKGNSALHIATRKGRV---QK 248 (534)
Q Consensus 177 ~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~----~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~---~~ 248 (534)
+.+++++|+++ +.+++ ..|..|.|++|.++..+. ..++++|++ .+.++|.+|.+|+||||+|+..++. ..
T Consensus 180 ~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~-~gad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp CHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHH-TTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcccHHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 99999999965 66654 458899999998775433 457788887 6778999999999999999999986 34
Q ss_pred HhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCC
Q 009452 249 LLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCG 291 (534)
Q Consensus 249 ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~ 291 (534)
|+...|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 4445799999999999999999999999999999999999864
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=289.09 Aligned_cols=227 Identities=25% Similarity=0.332 Sum_probs=171.0
Q ss_pred hcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcc------cccccccCCCcHHHHHHHCCCHH-HHHHHHhhCccccccCCC
Q 009452 57 KMNQSGETALYVAAEYGYVDMVREMIRYHDTS------LAGIKARNGYDAFHIAAKQGCLE-VLKILMEALPELLMTFDS 129 (534)
Q Consensus 57 ~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~------~~~~~~~~g~t~Lh~Aa~~g~~~-iv~~Ll~~~~~~~~~~d~ 129 (534)
++|..+.+||+.||..|+.++|++|++.+... ..+..+..|.||||.|+..++.+ +++.|++.+.+++. .|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~-~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV-TSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTC-CCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC-cCC
Confidence 45667789999999999999999999977532 23456778999999999888764 78999999888654 599
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhC
Q 009452 130 SNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKG 209 (534)
Q Consensus 130 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 209 (534)
+|+||||+|+..|+.+++++|++.++++ ...+.+|.||+|.|+..++.+++++|++.+++++.. |..|+||||+|+..
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~-d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKK-DLSGNTPLIYACSG 162 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHC
Confidence 9999999999999999999999999987 667889999999999999999999999999987654 89999999999999
Q ss_pred CCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCc-hhHHHHHHhc
Q 009452 210 QSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGH-SEIGVILKEH 286 (534)
Q Consensus 210 ~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~-~~i~~~L~~~ 286 (534)
|+.+++++|++ .+.++|.+|..|+||||+|+..|+. .++|+..|+|++.+|..|+|||++|++.++ .++++.|...
T Consensus 163 g~~~~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~ 241 (269)
T 4b93_B 163 GHHELVALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSC 241 (269)
T ss_dssp TCGGGHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC----
T ss_pred CCHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHh
Confidence 99999999999 6778999999999999999999986 688999999999999999999999987765 2344444443
Q ss_pred C
Q 009452 287 G 287 (534)
Q Consensus 287 g 287 (534)
+
T Consensus 242 ~ 242 (269)
T 4b93_B 242 V 242 (269)
T ss_dssp -
T ss_pred c
Confidence 3
No 30
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.9e-35 Score=286.35 Aligned_cols=240 Identities=20% Similarity=0.183 Sum_probs=209.8
Q ss_pred HHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCH
Q 009452 31 VRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCL 110 (534)
Q Consensus 31 ~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~ 110 (534)
++..+.+.+..++..+. ++.+|..|.||||+|+..|+.+++++|++.+.. .+.. +|.||||+|+..|+.
T Consensus 7 i~~~~~~~v~~lL~~~~-------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 7 INTWKSKQLKSFLSSKD-------TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL--KNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp GGGCCHHHHHHHHHSTT-------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG--GSCC--TTCCHHHHHTTSSSC
T ss_pred HHhcCHHHHHHHHHhCC-------CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC--CCCC--CCCCHHHHHHHcCCH
Confidence 45667777777776642 467789999999999999999999999998743 3333 599999999999999
Q ss_pred HHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCC-CcHHHHHHHcCcHHHHHHHHhcCC
Q 009452 111 EVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNG-KTALHSAARNGHLEIVKALLSKEP 189 (534)
Q Consensus 111 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-~tpLh~A~~~g~~~iv~~Ll~~~~ 189 (534)
+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...+..| .||||+|+..|+.+++++|+++++
T Consensus 76 ~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 76 KIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 153 (285)
T ss_dssp HHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHHHHHCCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 999999999988654 5899999999999999999999999999997 5677788 799999999999999999999998
Q ss_pred CCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcH-HHHHHHcCcH--HHHhhhcCCChHhhhccCCc
Q 009452 190 GIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSA-LHIATRKGRV--QKLLNINGVDKAVINKSRET 266 (534)
Q Consensus 190 ~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~-Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T 266 (534)
+.... ..|.||||+|+..|+.+++++|++ .+.+++.+|..|+|| ||+|+..++. .++|+.+|++++..|.
T Consensus 154 ~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~---- 226 (285)
T 3kea_A 154 STFDL--AILLSCIHITIKNGHVDMMILLLD-YMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL---- 226 (285)
T ss_dssp TTCCC--STHHHHHHHHHHTTCHHHHHHHHH-HHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG----
T ss_pred ccccc--cCCccHHHHHHHcChHHHHHHHHH-cCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh----
Confidence 76322 389999999999999999999999 477899999999998 9999999986 6899999999999984
Q ss_pred HHHHHHhcCchhHHHHHHhcCCCCCCC
Q 009452 267 ALDTAEKTGHSEIGVILKEHGVPCGKS 293 (534)
Q Consensus 267 ~l~~A~~~~~~~i~~~L~~~g~~~~~~ 293 (534)
.|+..|+.+++++|+++|++....
T Consensus 227 ---~a~~~~~~~iv~~Ll~~g~~~~~~ 250 (285)
T 3kea_A 227 ---ENVLLDDAEIAKMIIEKHVEYKSD 250 (285)
T ss_dssp ---GGGTTTCHHHHHHHHHHHHHHTTC
T ss_pred ---hhhhcCCHHHHHHHHHcCCCCCCc
Confidence 456789999999999999876543
No 31
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-34 Score=295.70 Aligned_cols=230 Identities=22% Similarity=0.295 Sum_probs=199.8
Q ss_pred cCC-CCCCcHHHHHHHcCCHHHHHHHH--------HhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcc
Q 009452 18 LTA-KRDDTPLQSLVRTGSVELVLDMI--------SSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTS 88 (534)
Q Consensus 18 ~~~-~~g~t~Lh~A~~~g~~~~v~~Ll--------~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~ 88 (534)
..| ..|.||||+|+..|+.+++++|+ +.|.+ ++.+|..|.||||+|+..|+.++|++|++.+.
T Consensus 119 ~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~------vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-- 190 (373)
T 2fo1_E 119 IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD------VNAMDCDENTPLMLAVLARRRRLVAYLMKAGA-- 190 (373)
T ss_dssp TCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--
T ss_pred ccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC------CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCC--
Confidence 445 78999999999999998888877 56654 35678999999999999999999999999874
Q ss_pred cccccccCCCcHHHHHHHCCCHHHHHHHHhhCc--cccccCCCCCCcHHHHHHhcC---CHHHHHHHHhcCCCchh----
Q 009452 89 LAGIKARNGYDAFHIAAKQGCLEVLKILMEALP--ELLMTFDSSNTTALHTASSQG---HVEVVKFLLEKGSTLAT---- 159 (534)
Q Consensus 89 ~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~--~~~~~~d~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~---- 159 (534)
+.+..+..|.||||+|+..|+.+++++|++.+. ...+..|..|.||||+|+..| +.+++++|+++|+++..
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 270 (373)
T 2fo1_E 191 DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270 (373)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG
T ss_pred CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc
Confidence 456788999999999999999999999999763 234455899999999999998 89999999999988743
Q ss_pred ---hhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcH
Q 009452 160 ---IARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSA 236 (534)
Q Consensus 160 ---~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~ 236 (534)
..+..|.||||+|+..|+.+++++|+++++......|..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||
T Consensus 271 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~t~ 349 (373)
T 2fo1_E 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ-QGASVEAVDATDHTA 349 (373)
T ss_dssp GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCSSSCCH
T ss_pred ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccCCCCCCCCH
Confidence 2466899999999999999999999998744445568999999999999999999999999 678899999999999
Q ss_pred HHHHHHcCcH--HHHhhhcCCC
Q 009452 237 LHIATRKGRV--QKLLNINGVD 256 (534)
Q Consensus 237 Lh~Aa~~~~~--~~ll~~~g~~ 256 (534)
||+|+..|+. .++|+.++.+
T Consensus 350 l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 350 RQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999986 6788877765
No 32
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-34 Score=286.85 Aligned_cols=246 Identities=24% Similarity=0.282 Sum_probs=206.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcH
Q 009452 21 KRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDA 100 (534)
Q Consensus 21 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~ 100 (534)
..|.||||.|+..|+.++|++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.+ .+.+..+..|.||
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~g~tp 109 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGAD------INYANVDGLTALHQACIDDNVDMVKFLVENG--ANINQPDNEGWIP 109 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCC------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCcH
Confidence 3567999999999999999999999876 3567889999999999999999999999987 4566788899999
Q ss_pred HHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhc-CCCchhhhhcCCCcHHHHHHHcCcHH
Q 009452 101 FHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEK-GSTLATIARSNGKTALHSAARNGHLE 179 (534)
Q Consensus 101 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpLh~A~~~g~~~ 179 (534)
||+|+..|+.+++++|++++++... .|..|.||||+|+..|+.++++.++.. +.++ ...+..+.++++ .
T Consensus 110 L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~--------~ 179 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI-EAARKEEERIML--------R 179 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHH--------H
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCc-hhhhhhhhhHHH--------H
Confidence 9999999999999999999887654 489999999999999999999998876 4443 333333333333 3
Q ss_pred HHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCCh
Q 009452 180 IVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDK 257 (534)
Q Consensus 180 iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~ 257 (534)
.+..++..+.......+..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..|+. .++|+..|+++
T Consensus 180 ~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 180 DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 45566777776666678899999999999999999999998 6778999999999999999999986 68899999999
Q ss_pred HhhhccCCcHHHHHHhcCchhHHHHHHh
Q 009452 258 AVINKSRETALDTAEKTGHSEIGVILKE 285 (534)
Q Consensus 258 ~~~n~~g~T~l~~A~~~~~~~i~~~L~~ 285 (534)
+.+|..|+||+++|.......+.+++.+
T Consensus 259 ~~~d~~g~t~l~~A~~~~~~~l~~l~~~ 286 (299)
T 1s70_B 259 EAVNKVGQTAFDVADEDILGYLEELQKK 286 (299)
T ss_dssp TCCCTTSCCTTTSCCSGGGHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999976444344343333
No 33
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.5e-34 Score=280.28 Aligned_cols=238 Identities=19% Similarity=0.197 Sum_probs=185.5
Q ss_pred HhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcc-cccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcH
Q 009452 56 SKMNQSGETALYVAAEYGYVDMVREMIRYHDTS-LAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTA 134 (534)
Q Consensus 56 ~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~-~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp 134 (534)
+.+|..|.||||+|+..|+.++|++|++.+... ..+.++..|.||||+|+..|+.+++++|+++++++.. .|..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tp 81 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHTA 81 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCCH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCH
Confidence 456899999999999999999999999987542 2677889999999999999999999999999988654 48899999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCchh------------hhhcCCCcHHHHHHHcCcHHHHHHHHh-cCCCCcccCCCCCCc
Q 009452 135 LHTASSQGHVEVVKFLLEKGSTLAT------------IARSNGKTALHSAARNGHLEIVKALLS-KEPGIVLRNDKKGQT 201 (534)
Q Consensus 135 Lh~A~~~g~~~~v~~Ll~~~~~~~~------------~~~~~g~tpLh~A~~~g~~~iv~~Ll~-~~~~~~~~~d~~g~t 201 (534)
||+|+..|+.+++++|++++++... .....+.++++.++..+.......++. .+.+ ....|..|.|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~t 160 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQ-LEAENYDGHT 160 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGG-TTCCCTTSCC
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhc-CCCcCCCCcC
Confidence 9999999999999999999876321 122346677777776655444433333 3333 3345889999
Q ss_pred HHHHHHhCCCHHHHHHHhhcCCccccccCCC-CCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchh
Q 009452 202 ALHMAVKGQSIELVDELVKVEPVIINMVDAK-GNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSE 278 (534)
Q Consensus 202 ~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~-G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~ 278 (534)
|||+|+..|+.+++++|++ .+.+++.++.. |+||||+|+..++. .++|+..|++++.+|..|.|||++|+..|+.+
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRD-AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred HHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcH
Confidence 9999999999999999999 56678888854 99999999999986 68899999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCC
Q 009452 279 IGVILKEHGVPCGKSIKP 296 (534)
Q Consensus 279 i~~~L~~~g~~~~~~~~~ 296 (534)
++++|+++|+++......
T Consensus 240 ~v~~Ll~~ga~~~~~~~~ 257 (282)
T 1oy3_D 240 LARLLRAHGAPEPEDGGD 257 (282)
T ss_dssp HHHHHHHTTCCCCCCC--
T ss_pred HHHHHHHcCCCcCcCCCc
Confidence 999999999998755443
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=268.57 Aligned_cols=232 Identities=22% Similarity=0.279 Sum_probs=202.3
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCC
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNG 97 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g 97 (534)
..|..|.|+||.|++.|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+... ....+..|
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~~ 76 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDV------RQPDKENVTLLHWAAINNRIDLVKYYISKGAIV-DQLGGDLN 76 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTT
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCc------CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc-hhhcCCcC
Confidence 35778999999999999999999999998763 566889999999999999999999999987533 23445669
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCc
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGH 177 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~ 177 (534)
.||||+|+..|+.+++++|++.+++... .|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||.|+..++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCC
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCC
Confidence 9999999999999999999999887654 4889999999999999999999999999987 6678899999999997666
Q ss_pred -HHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcC
Q 009452 178 -LEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNING 254 (534)
Q Consensus 178 -~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g 254 (534)
.+++++|++.+.++....+..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..++. .++|++.+
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA-GANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 89999999999998876445899999999999999999999995 678999999999999999999986 67888877
Q ss_pred CChHh
Q 009452 255 VDKAV 259 (534)
Q Consensus 255 ~~~~~ 259 (534)
.+...
T Consensus 234 ~~~~~ 238 (240)
T 3eu9_A 234 QAKGY 238 (240)
T ss_dssp -----
T ss_pred hccCc
Confidence 66543
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8.5e-34 Score=267.94 Aligned_cols=216 Identities=22% Similarity=0.264 Sum_probs=177.3
Q ss_pred CCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHh
Q 009452 73 GYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLE 152 (534)
Q Consensus 73 g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 152 (534)
|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++++++... .|..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGASL-HNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCc-ccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5677788888776432 233477888888888888888888888888776544 47888888888888888888888888
Q ss_pred cCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCC
Q 009452 153 KGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAK 232 (534)
Q Consensus 153 ~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~ 232 (534)
+++......+..|.||||+|+..|+.+++++|+++++++... |..|.||||+|+..|+.+++++|++ .+.+++.+|..
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~ 157 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNR 157 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTT
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCc-CCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCC
Confidence 887555667788889999999888899999998888876544 7888899999999999999999988 46778888899
Q ss_pred CCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCC
Q 009452 233 GNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGK 292 (534)
Q Consensus 233 G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~ 292 (534)
|+||||+|+..++. .++|+..|++++..|..|.||+++|+..++.+++++|+++|+....
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 99999999988875 6788888999999999999999999999999999999999987543
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3e-33 Score=264.17 Aligned_cols=213 Identities=21% Similarity=0.253 Sum_probs=161.2
Q ss_pred CCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHH
Q 009452 34 GSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVL 113 (534)
Q Consensus 34 g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv 113 (534)
|+.+++++|++.+.+.+ ...+..|.||||+|+..|+.+++++|++.+ .+.+..+..|.||||+|+..|+.+++
T Consensus 2 g~~~~i~~Ll~~g~~~~-----~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLH-----NQTDRTGETALHLAARYSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ---CCEETTEETTCCTT-----CCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHcCCCcc-----cccCCCCCchHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 56677777777776431 334677888888888888888888888876 34555677788888888888888888
Q ss_pred HHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcc
Q 009452 114 KILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVL 193 (534)
Q Consensus 114 ~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~ 193 (534)
++|++.++......+..|.||||+|+..|+.+++++|+++++++ ...+..|.||||+|+..|+.+++++|+++++++..
T Consensus 75 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (223)
T 2f8y_A 75 QILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 153 (223)
T ss_dssp HHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 88888777555566778888888888888888888888888776 55677788888888888888888888888777654
Q ss_pred cCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCC
Q 009452 194 RNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVD 256 (534)
Q Consensus 194 ~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~ 256 (534)
. |..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..++. .++|+++|+.
T Consensus 154 ~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 154 Q-NNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp C-CTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred c-CCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 3 7788888888888888888888887 4566788888888888888888775 5777777765
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.3e-32 Score=270.52 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=194.1
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccC
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARN 96 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 96 (534)
+..|..|.||||+|++.|+.++|++|++.+.+.+ . .+|.||||+|+..|+.+++++|++.+. +.+.++..
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~--~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~ 94 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKN------L--LENEFPLHQAATLEDTKIVKILLFSGL--DDSQFDDK 94 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS------C--CTTCCHHHHHTTSSSCHHHHHHHHTTC--CTTCCCTT
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC------C--CCCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCC
Confidence 5677899999999999999999999999986542 2 259999999999999999999999874 45668889
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCC-CcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHc
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSN-TTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARN 175 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g-~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 175 (534)
|.||||+|+..|+.+++++|+++++++... |..| .||||+|+..|+.+++++|+++|++... ...|.||||+|+..
T Consensus 95 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~ 171 (285)
T 3kea_A 95 GNTALYYAVDSGNMQTVKLFVKKNWRLMFY-GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKN 171 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGC-SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCcc-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHHHHHHHc
Confidence 999999999999999999999999887654 8888 8999999999999999999999987622 12789999999999
Q ss_pred CcHHHHHHHHhcCCCCcccCCCCCCcH-HHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhh
Q 009452 176 GHLEIVKALLSKEPGIVLRNDKKGQTA-LHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNI 252 (534)
Q Consensus 176 g~~~iv~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~ 252 (534)
|+.+++++|+++|+++.. .|..|+|| ||+|+..|+.+++++|++ .+.+++.+|. .|+..++. .++|++
T Consensus 172 g~~~~v~~Ll~~gad~n~-~~~~g~t~~L~~A~~~~~~~~v~~Ll~-~gad~~~~~~-------~a~~~~~~~iv~~Ll~ 242 (285)
T 3kea_A 172 GHVDMMILLLDYMTSTNT-NNSLLFIPDIKLAIDNKDIEMLQALFK-YDINIYSANL-------ENVLLDDAEIAKMIIE 242 (285)
T ss_dssp TCHHHHHHHHHHHHHTCT-TCCCBCCTTHHHHHHHTCHHHHHHHTT-SCBCSTTTTG-------GGGTTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCCc-ccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCh-------hhhhcCCHHHHHHHHH
Confidence 999999999999988765 48899998 999999999999999999 5777888873 45666765 789999
Q ss_pred cCCChHhhh
Q 009452 253 NGVDKAVIN 261 (534)
Q Consensus 253 ~g~~~~~~n 261 (534)
+|++++...
T Consensus 243 ~g~~~~~~~ 251 (285)
T 3kea_A 243 KHVEYKSDS 251 (285)
T ss_dssp HHHHHTTCT
T ss_pred cCCCCCCcc
Confidence 998765443
No 38
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=8.6e-32 Score=255.88 Aligned_cols=194 Identities=21% Similarity=0.253 Sum_probs=156.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHh-cCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCccc---ccccccCC
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISS-YGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSL---AGIKARNG 97 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~---~~~~~~~g 97 (534)
.|.||||.|++.|+.+++++|++. +.+ ++.+|..|.||||+|+..|+.+++++|++.+.... ....+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g 75 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE------VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEG 75 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC------cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCC
Confidence 588999999999999999999987 544 35668889999999999999999999998874421 14456788
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCccccccC------------CCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCC
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPELLMTF------------DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNG 165 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~------------d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 165 (534)
.||||+|+..|+.+++++|++++++..... |..|.||||+|+..|+.+++++|+++|+++ +..|..|
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g 154 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLG 154 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCC
Confidence 999999999999999999999887764431 236888888888888888888888888887 5678888
Q ss_pred CcHHHHHHHcCcHHHH----HHHHhcCCCCc-----ccCCCCCCcHHHHHHhCCCHHHHHHHhhcC
Q 009452 166 KTALHSAARNGHLEIV----KALLSKEPGIV-----LRNDKKGQTALHMAVKGQSIELVDELVKVE 222 (534)
Q Consensus 166 ~tpLh~A~~~g~~~iv----~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~ 222 (534)
.||||+|+..|+.+++ ++|++.+++.. ...|..|+||||+|++.|+.+++++|++.+
T Consensus 155 ~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 155 NTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp CCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 8888888888888877 88888887664 456788888888888888888888888743
No 39
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=1.5e-33 Score=268.97 Aligned_cols=218 Identities=19% Similarity=0.261 Sum_probs=124.2
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccC
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARN 96 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~ 96 (534)
+..|.+|.||||+|+..|+.++++.|++.+.... ..++..+..|.||||+|+..|+.+++++|++.+ ...+.++..
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~ 77 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDL--AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG--CDPELRDFR 77 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----C--CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC--CCSCCCCTT
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccH--HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCC
Confidence 4456666666666666666666666666553210 124555566666666666666666666666654 334445666
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCcc-----ccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhc-CCCcHHH
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPE-----LLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARS-NGKTALH 170 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~-----~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~tpLh 170 (534)
|.||||+|+..|+.+++++|++.++. .....|..|.||||+|+..|+.+++++|+++|+++ ...+. .|.||||
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALH 156 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHH
Confidence 66666666666666666666665542 23344556666666666666666666666666665 23333 5666666
Q ss_pred HHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCcc-ccccCCCCCcHHHHH
Q 009452 171 SAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVI-INMVDAKGNSALHIA 240 (534)
Q Consensus 171 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~-in~~d~~G~T~Lh~A 240 (534)
+|+..|+.+++++|+++|+++... |..|.||||+|+..|+.+++++|++.+... ...++..|.|+.+.+
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRV-TYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTE 226 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCC-CTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcc-cCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhh
Confidence 666666666666666666655433 566666666666666666666666633221 124555555554433
No 40
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=1.4e-31 Score=248.36 Aligned_cols=192 Identities=24% Similarity=0.282 Sum_probs=145.4
Q ss_pred cCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHH
Q 009452 95 RNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAAR 174 (534)
Q Consensus 95 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~ 174 (534)
..+.||||.|+..|+.+.++.|++.++...+..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 346677777777777777777777766445555777777777777777777777777777776 4566777778888887
Q ss_pred cCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCc-----H--H
Q 009452 175 NGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGR-----V--Q 247 (534)
Q Consensus 175 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~-----~--~ 247 (534)
.|+.+++++|++.+.......|..|.||||.|+..|+.+++++|++.++.+++.+|..|+||||+|+..++ . .
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 78888888777555444445577788888888888888888888876657778888888888888887765 2 5
Q ss_pred HHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcC
Q 009452 248 KLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHG 287 (534)
Q Consensus 248 ~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g 287 (534)
++|++.|++++..|..|.||+++|+..|+.+++++|+++|
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 7777888888888888888888888888888888888876
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=4.2e-33 Score=265.89 Aligned_cols=215 Identities=25% Similarity=0.276 Sum_probs=186.3
Q ss_pred hcCCCCCcHHHHHHHcCCHHHHHHHHHhCCc--ccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcH
Q 009452 57 KMNQSGETALYVAAEYGYVDMVREMIRYHDT--SLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTA 134 (534)
Q Consensus 57 ~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~--~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp 134 (534)
.+|.+|.||||+|+..|+.+++++|++.+.. ...+..+..|.||||+|+..|+.+++++|+++++++.. .|..|.||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~ 81 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTP 81 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCH
Confidence 4578999999999999999999999987643 25677889999999999999999999999999887654 48999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCc-----hhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhC
Q 009452 135 LHTASSQGHVEVVKFLLEKGSTL-----ATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKG 209 (534)
Q Consensus 135 Lh~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 209 (534)
||+|+..|+.+++++|++.+++. ....+..|.||||+|+..|+.+++++|+++++++....+..|.||||+|+..
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 99999999999999999998652 3556788999999999999999999999999998766333999999999999
Q ss_pred CCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChH--hhhccCCcHHHHHHh
Q 009452 210 QSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKA--VINKSRETALDTAEK 273 (534)
Q Consensus 210 ~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~--~~n~~g~T~l~~A~~ 273 (534)
|+.+++++|++ .+.+++.+|..|.||||+|+..++. .++|+.+|++.. ..+..|.|+.+.+..
T Consensus 162 ~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 162 QNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp TCHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred CCHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 99999999999 5788999999999999999999986 689999999877 788999999886654
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=1.2e-31 Score=254.79 Aligned_cols=206 Identities=26% Similarity=0.251 Sum_probs=151.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCcccc----ccCCCCCCcHHH
Q 009452 61 SGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELL----MTFDSSNTTALH 136 (534)
Q Consensus 61 ~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~----~~~d~~g~tpLh 136 (534)
.|+||||+|+..|+.+++++|++.. +.+.+.++..|.||||+|+..|+.+++++|++.+++.. ...|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 5788999999999999999888862 24566678888899999999999999999998887753 334667888888
Q ss_pred HHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHH
Q 009452 137 TASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVD 216 (534)
Q Consensus 137 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~ 216 (534)
+|+..|+.+++++|+++|+++.. .+.. +.++. .....|..|.||||+|+..|+.++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~-~~~~--~~~~~-------------------~~~~~~~~g~t~L~~A~~~~~~~~v~ 138 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSA-RATG--SVFHY-------------------RPHNLIYYGEHPLSFAACVGSEEIVR 138 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC-CCCS--GGGSC-------------------CTTCSCCCCSSHHHHHHHHTCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCc-ccCC--cceee-------------------cccccccCCCCHHHHHHHcCCHHHHH
Confidence 88888888888888888877632 2221 11100 01123456777777777777777777
Q ss_pred HHhhcCCccccccCCCCCcHHHHHHHcCcH--H----HHhhhcCCCh------HhhhccCCcHHHHHHhcCchhHHHHHH
Q 009452 217 ELVKVEPVIINMVDAKGNSALHIATRKGRV--Q----KLLNINGVDK------AVINKSRETALDTAEKTGHSEIGVILK 284 (534)
Q Consensus 217 ~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~----~ll~~~g~~~------~~~n~~g~T~l~~A~~~~~~~i~~~L~ 284 (534)
+|++ .+.+++.+|.+|+||||+|+..++. . ++|+..|++. +..|..|.|||++|+..|+.+++++|+
T Consensus 139 ~Ll~-~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll 217 (232)
T 2rfa_A 139 LLIE-HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLM 217 (232)
T ss_dssp HHHH-TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHH-CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 7776 4566777777777777777777764 2 6677777776 577888888888888889999999999
Q ss_pred hcCCCC
Q 009452 285 EHGVPC 290 (534)
Q Consensus 285 ~~g~~~ 290 (534)
++|...
T Consensus 218 ~~g~~~ 223 (232)
T 2rfa_A 218 QKRKHI 223 (232)
T ss_dssp HHHHHC
T ss_pred hcCccc
Confidence 888654
No 43
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.98 E-value=9.2e-33 Score=272.93 Aligned_cols=256 Identities=20% Similarity=0.207 Sum_probs=206.2
Q ss_pred HHHHcCCHHHHHHHHHhcCChhHH---HHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHH
Q 009452 29 SLVRTGSVELVLDMISSYGDMELR---EMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAA 105 (534)
Q Consensus 29 ~A~~~g~~~~v~~Ll~~~~~~~~~---~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa 105 (534)
.+++.++.+.++.++......... ......+..|.||||.||..|+.++|++|++.+. +.+..+..|.||||+|+
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~ 81 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALHQAC 81 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHH
Confidence 467788888888888776432110 0011223467899999999999999999999874 46678889999999999
Q ss_pred HCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHH
Q 009452 106 KQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALL 185 (534)
Q Consensus 106 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll 185 (534)
..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.++++.++
T Consensus 82 ~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 82 IDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp HTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 99999999999999887654 4889999999999999999999999999987 667889999999999999999999988
Q ss_pred hcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhcc
Q 009452 186 SKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKS 263 (534)
Q Consensus 186 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~ 263 (534)
..........+..+.++++ ..+..++..........|..|.||||+|+..|+. .++|+..|++++..|..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~ 231 (299)
T 1s70_B 160 NRQGVDIEAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231 (299)
T ss_dssp HHHTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT
T ss_pred hhcCCCchhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCC
Confidence 7643322221222233332 2344455556666677889999999999999986 68889999999999999
Q ss_pred CCcHHHHHHhcCchhHHHHHHhcCCCCCCCCCC
Q 009452 264 RETALDTAEKTGHSEIGVILKEHGVPCGKSIKP 296 (534)
Q Consensus 264 g~T~l~~A~~~~~~~i~~~L~~~g~~~~~~~~~ 296 (534)
|.||||+|+..|+.+++++|+++|+++......
T Consensus 232 g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 264 (299)
T 1s70_B 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKV 264 (299)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCC
Confidence 999999999999999999999999987654443
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.1e-30 Score=242.54 Aligned_cols=194 Identities=21% Similarity=0.271 Sum_probs=163.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCc
Q 009452 20 AKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYD 99 (534)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 99 (534)
+..+.||||.|+..|+.+.++.|++.++. .++..+..|.||||+|+..|+.+++++|++.+ .+.+..+..|.|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t 74 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTY-----QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG--ADINLQNSISDS 74 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTC-----CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCC
Confidence 35688999999999999999999988752 14566888999999999999999999999986 445667888999
Q ss_pred HHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCc--
Q 009452 100 AFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGH-- 177 (534)
Q Consensus 100 ~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~-- 177 (534)
|||+|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|++++.......+..|.||||+|+..|+
T Consensus 75 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 154 (201)
T 3hra_A 75 PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGN 154 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCS
T ss_pred HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccch
Confidence 999999999999999999766655666688899999999999999999999999833336778889999999998887
Q ss_pred ---HHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhc
Q 009452 178 ---LEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKV 221 (534)
Q Consensus 178 ---~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 221 (534)
.+++++|+++++++.. .|..|+||||+|++.|+.+++++|++.
T Consensus 155 ~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 155 QLYQDIVKLLMENGADQSI-KDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred hhHHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 8999999999888764 478899999999999999999999873
No 45
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.9e-32 Score=274.69 Aligned_cols=240 Identities=17% Similarity=0.120 Sum_probs=164.3
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHh-----------cCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSK-----------MNQSGETALYVAAEYGYVDMVREMIRYHD 86 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~-----------~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~ 86 (534)
..+..|.|+++ |+.++|+.|+++|.+++...+... ......+.+|+|+..+..++++.|++.+
T Consensus 47 ~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g- 120 (327)
T 1sw6_A 47 KALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQ- 120 (327)
T ss_dssp ECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSC-
T ss_pred cCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcC-
Confidence 35567778876 888888888888765443222111 1111223457777777778888888765
Q ss_pred cccccc-cccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCC---HHHHHHHHhcCCCchhhhh
Q 009452 87 TSLAGI-KARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGH---VEVVKFLLEKGSTLATIAR 162 (534)
Q Consensus 87 ~~~~~~-~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~---~~~v~~Ll~~~~~~~~~~~ 162 (534)
.+++. ++..|.||||+|+..|+.+++++|+++++++. ..|..|+||||+|+..|+ .++++.|++.+.......|
T Consensus 121 -~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 121 -LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp -CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred -CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 44555 68888888888888888888888888887765 448888888888888887 6777777777633346677
Q ss_pred cCCCcHHHHHHH----cCcHHHHHHHHhc--------------------CCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q 009452 163 SNGKTALHSAAR----NGHLEIVKALLSK--------------------EPGIVLRNDKKGQTALHMAVKGQSIELVDEL 218 (534)
Q Consensus 163 ~~g~tpLh~A~~----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 218 (534)
..|.||||+|+. .|+.+++++|++. +.++.. .+..|.||||.|+. +++|
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~-~~~~g~t~L~~a~~------~~~L 271 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND-KNGERKDSILENLD------LKWI 271 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHH
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc-ccccCCChhHHHHH------HHHH
Confidence 888888888888 8888888888876 445443 47788888888885 7788
Q ss_pred hhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcC
Q 009452 219 VKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTG 275 (534)
Q Consensus 219 l~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~ 275 (534)
++. ++|.+|.+|+||||+|+..|+. .++|+.+|++++.+|..|+||||+|+..|
T Consensus 272 l~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 272 IAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 875 4788888888888888888875 67788888888888888888888887653
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.2e-31 Score=259.86 Aligned_cols=219 Identities=17% Similarity=0.201 Sum_probs=152.3
Q ss_pred hcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCC--hhHHHHHHhcCCCCCcHHHHHHHc---CCHHHHHHHHHhCCcc---
Q 009452 17 QLTAKRDDTPLQSLVRTGSVELVLDMISSYGD--MELREMLSKMNQSGETALYVAAEY---GYVDMVREMIRYHDTS--- 88 (534)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~--~~~~~~l~~~n~~g~T~Lh~Aa~~---g~~~iv~~Ll~~~~~~--- 88 (534)
+..|..|.||||.|++.|+.++|+.|++.+.+ .++.......+..|.||||+|+.. |+.+++++|++.+...
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 45778899999999999999999888874311 000000113467899999999987 9999999999876321
Q ss_pred ------cccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCC--------------CCCcHHHHHHhcCCHHHHH
Q 009452 89 ------LAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDS--------------SNTTALHTASSQGHVEVVK 148 (534)
Q Consensus 89 ------~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~--------------~g~tpLh~A~~~g~~~~v~ 148 (534)
.....+..|.||||+|+..|+.+++++|+++++++... +. .|.||||+|+..|+.++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA-ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc-ccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 11124567888888888888888888888888776544 43 6888888888888888888
Q ss_pred HHHh---cCCCchhhhhcCCCcHHHHHHHcCc---------HHHHHHHHhcCCCCcc------cCCCCCCcHHHHHHhCC
Q 009452 149 FLLE---KGSTLATIARSNGKTALHSAARNGH---------LEIVKALLSKEPGIVL------RNDKKGQTALHMAVKGQ 210 (534)
Q Consensus 149 ~Ll~---~~~~~~~~~~~~g~tpLh~A~~~g~---------~~iv~~Ll~~~~~~~~------~~d~~g~t~Lh~A~~~~ 210 (534)
+|++ .|+++ +..|.+|.||||+|+..|+ .+++++|+++++++.. ..|..|+||||+|++.|
T Consensus 166 ~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 166 FLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp HHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 8888 77776 5677788888888888777 7888888888777652 45778888888888888
Q ss_pred CHHHHHHHhhcCCccccccCCCCCcHH
Q 009452 211 SIELVDELVKVEPVIINMVDAKGNSAL 237 (534)
Q Consensus 211 ~~~iv~~Ll~~~~~~in~~d~~G~T~L 237 (534)
+.+++++|++.+..+.......+.+|-
T Consensus 245 ~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 245 KIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp CHHHHHHHHHHHTC-------------
T ss_pred hHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 888888888865545555555555543
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=4.7e-31 Score=254.85 Aligned_cols=204 Identities=18% Similarity=0.161 Sum_probs=132.0
Q ss_pred CCcHHHHHHHcCCHH----HHHHHHHhCCcccccc----cccCCCcHHHHHHHC---CCHHHHHHHHhhCcccccc----
Q 009452 62 GETALYVAAEYGYVD----MVREMIRYHDTSLAGI----KARNGYDAFHIAAKQ---GCLEVLKILMEALPELLMT---- 126 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~----iv~~Ll~~~~~~~~~~----~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~~~~~~~~---- 126 (534)
|.||||.|+..|+.+ ++++|++.+. +.+. .+..|.||||+|+.. |+.+++++|++.+++....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~--~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSK--YLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTC--CTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCC--CcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 667777777777775 4455555542 3333 566677777777777 7777777777766554311
Q ss_pred ------CCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCC
Q 009452 127 ------FDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQ 200 (534)
Q Consensus 127 ------~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 200 (534)
.|..|.||||+|+..|+.+++++|+++|+++ ...+..+.++ .+ ....|..|.
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~--------------------~~-~~~~~~~g~ 137 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQ--------------------KH-QGTCFYFGE 137 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGS--------------------CC-SSSCCCSCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cccccccccc--------------------cc-ccccccCCC
Confidence 1244556666666666666666666665554 2223221100 00 001122377
Q ss_pred cHHHHHHhCCCHHHHHHHhhc--CCccccccCCCCCcHHHHHHH--cCc---------HHHHhhhcCCCh-------Hhh
Q 009452 201 TALHMAVKGQSIELVDELVKV--EPVIINMVDAKGNSALHIATR--KGR---------VQKLLNINGVDK-------AVI 260 (534)
Q Consensus 201 t~Lh~A~~~~~~~iv~~Ll~~--~~~~in~~d~~G~T~Lh~Aa~--~~~---------~~~ll~~~g~~~-------~~~ 260 (534)
||||+|+..|+.+++++|++. .+.++|.+|.+|+||||+|+. .++ +.++|+..|+++ +.+
T Consensus 138 tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~ 217 (256)
T 2etb_A 138 LPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEIS 217 (256)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCC
T ss_pred CHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccccc
Confidence 777777777777777777774 566677777778888888777 444 457777888888 888
Q ss_pred hccCCcHHHHHHhcCchhHHHHHHhcCCC
Q 009452 261 NKSRETALDTAEKTGHSEIGVILKEHGVP 289 (534)
Q Consensus 261 n~~g~T~l~~A~~~~~~~i~~~L~~~g~~ 289 (534)
|..|.|||++|+..|+.+++++|+++|.+
T Consensus 218 d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 218 NHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 88899999999999999999999888754
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.1e-31 Score=257.91 Aligned_cols=213 Identities=16% Similarity=0.187 Sum_probs=139.8
Q ss_pred HhcCCCCCcHHHHHHHcCCHHHHHHHHHhCC--ccccc----ccccCCCcHHHHHHHC---CCHHHHHHHHhhCcccc--
Q 009452 56 SKMNQSGETALYVAAEYGYVDMVREMIRYHD--TSLAG----IKARNGYDAFHIAAKQ---GCLEVLKILMEALPELL-- 124 (534)
Q Consensus 56 ~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~--~~~~~----~~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~~~~~~-- 124 (534)
+..|..|.||||.|+..|+.++|+.|++.+. ....+ ..+..|.||||+|+.. |+.+++++|++.+++..
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 4557888899999999999888888887431 11111 3467788888888876 88888888888765421
Q ss_pred ----c----cCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCC
Q 009452 125 ----M----TFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRND 196 (534)
Q Consensus 125 ----~----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d 196 (534)
+ ..|..|.||||+|+..|+.+++++|+++|+++ ...+..+. +. .......+
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~------------------~~--~~~~~~~~ 145 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDF------------------FK--KTKGRPGF 145 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGG------------------GS--SCSSSCCC
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Cccccccc------------------cc--cccccccc
Confidence 1 13456666777766666666666666666665 22332110 00 00011123
Q ss_pred CCCCcHHHHHHhCCCHHHHHHHhhc--CCccccccCCCCCcHHHHHHHcCc-----------HHHHhhhcCCChH-----
Q 009452 197 KKGQTALHMAVKGQSIELVDELVKV--EPVIINMVDAKGNSALHIATRKGR-----------VQKLLNINGVDKA----- 258 (534)
Q Consensus 197 ~~g~t~Lh~A~~~~~~~iv~~Ll~~--~~~~in~~d~~G~T~Lh~Aa~~~~-----------~~~ll~~~g~~~~----- 258 (534)
..|.||||+|+..|+.+++++|++. .+.+++.+|.+|+||||+|+..++ +.++|+..|++++
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~ 225 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKL 225 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccc
Confidence 4677777777777777777777764 456677777777777777777654 2456777777775
Q ss_pred --hhhccCCcHHHHHHhcCchhHHHHHHhcCCC
Q 009452 259 --VINKSRETALDTAEKTGHSEIGVILKEHGVP 289 (534)
Q Consensus 259 --~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~ 289 (534)
..|..|.|||++|+..|+.+++++|+++|++
T Consensus 226 ~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 226 EEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred ccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 4788888888888888888888888888883
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.4e-30 Score=249.87 Aligned_cols=197 Identities=23% Similarity=0.284 Sum_probs=162.9
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHc---CCHHHHHHHHHhCCcccc----
Q 009452 22 RDDTPLQSLVRTGSVE----LVLDMISSYGDMELREMLSKMNQSGETALYVAAEY---GYVDMVREMIRYHDTSLA---- 90 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~---g~~~iv~~Ll~~~~~~~~---- 90 (534)
.|.||||.|++.|+.+ ++++|++.+.+.+.. ....+..|.||||+|+.. |+.+++++|++.+.....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~--~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDS--AYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSG--GGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccc--cccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 4789999999999997 556666677653210 012688999999999999 999999999998643221
Q ss_pred -----cccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCC-------------CCcHHHHHHhcCCHHHHHHHHh
Q 009452 91 -----GIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSS-------------NTTALHTASSQGHVEVVKFLLE 152 (534)
Q Consensus 91 -----~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~-------------g~tpLh~A~~~g~~~~v~~Ll~ 152 (534)
..+|..|.||||+|+..|+.+++++|+++++++... |.. |.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR-ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 123467999999999999999999999999886544 544 9999999999999999999999
Q ss_pred ---cCCCchhhhhcCCCcHHHHHHH--cCcHH-------HHHHHHhcCCCCc------ccCCCCCCcHHHHHHhCCCHHH
Q 009452 153 ---KGSTLATIARSNGKTALHSAAR--NGHLE-------IVKALLSKEPGIV------LRNDKKGQTALHMAVKGQSIEL 214 (534)
Q Consensus 153 ---~~~~~~~~~~~~g~tpLh~A~~--~g~~~-------iv~~Ll~~~~~~~------~~~d~~g~t~Lh~A~~~~~~~i 214 (534)
+|+++ +..|.+|.||||+|+. .++.+ ++++|+++|+++. ...|..|+||||+|++.|+.++
T Consensus 158 ~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 158 NPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 88887 6678899999999998 78888 9999999988763 4568899999999999999999
Q ss_pred HHHHhhcC
Q 009452 215 VDELVKVE 222 (534)
Q Consensus 215 v~~Ll~~~ 222 (534)
+++|++.+
T Consensus 237 v~~Ll~~g 244 (256)
T 2etb_A 237 FRHILQRE 244 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhCC
Confidence 99999853
No 50
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=3.3e-29 Score=226.09 Aligned_cols=156 Identities=32% Similarity=0.435 Sum_probs=94.2
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHH
Q 009452 26 PLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAA 105 (534)
Q Consensus 26 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa 105 (534)
+|+.|++.|+.++|+.|++.|+++ +.+|..|.||||+|+..|+.+++++|++.+ .+.+.++.+|.||||+|+
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadv------n~~d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADV------NASDSDGRTPLHHAAENGHKEVVKLLISKG--ADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcCCCCCCHHHHHHHcCCHHHHHHHHhcc--cchhhhccCCCCHHHHHH
Confidence 466666666666666666666543 344566666666666666666666666655 334455666666666666
Q ss_pred HCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHH
Q 009452 106 KQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALL 185 (534)
Q Consensus 106 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll 185 (534)
..|+.+++++|+++++++.. +|.+|+||||+|+..|+.+++++|+++|+++ ...|.+|.||||+|+..|+.+++++|+
T Consensus 79 ~~g~~~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 66666666666666655433 3666666666666666666666666666665 445566666666666666666666666
Q ss_pred hcCCCC
Q 009452 186 SKEPGI 191 (534)
Q Consensus 186 ~~~~~~ 191 (534)
++|+++
T Consensus 157 ~~GA~i 162 (169)
T 4gpm_A 157 KQGGWL 162 (169)
T ss_dssp TC----
T ss_pred HCCCCc
Confidence 666554
No 51
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-31 Score=265.67 Aligned_cols=255 Identities=18% Similarity=0.110 Sum_probs=191.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccc-------
Q 009452 20 AKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGI------- 92 (534)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~------- 92 (534)
+..+.+|+| ....++|++|+++|.+ ++..+..|.|+++ |+.++|+.|++.+.......
T Consensus 20 ~~~~~~~~~----~~~~dlv~~ll~~ga~------i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~ 84 (327)
T 1sw6_A 20 NDRTAGPII----TFTHDLTSDFLSSPLK------IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNN 84 (327)
T ss_dssp -----CCEE----ECCTTCCCSTTTSSCC------CEECBCCCCCCCH-----HHHHHHHHHHHHHHC------------
T ss_pred ccccccchh----hhcCchHHHHhhCCcc------cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhc
Confidence 345666666 3556789999999976 4567889999988 99999999999873321100
Q ss_pred --------cccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcC
Q 009452 93 --------KARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSN 164 (534)
Q Consensus 93 --------~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 164 (534)
+.....+.+|+|+..+..++++.|++.+.++....|..|+||||+|+..|+.+++++|+++|+++ ...|.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~ 163 (327)
T 1sw6_A 85 DSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNM 163 (327)
T ss_dssp -------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTT
T ss_pred ccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 11112234588888888899999999988877646999999999999999999999999999998 678899
Q ss_pred CCcHHHHHHHcCc---HHHHHHHHhcCCCCcccCCCCCCcHHHHHHh----CCCHHHHHHHhhcC---------------
Q 009452 165 GKTALHSAARNGH---LEIVKALLSKEPGIVLRNDKKGQTALHMAVK----GQSIELVDELVKVE--------------- 222 (534)
Q Consensus 165 g~tpLh~A~~~g~---~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~----~~~~~iv~~Ll~~~--------------- 222 (534)
|.||||+|+..|+ .++++.|++.+.......|..|+||||+|+. .|+.+++++|++..
T Consensus 164 g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~ 243 (327)
T 1sw6_A 164 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSG 243 (327)
T ss_dssp CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC
T ss_pred CCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhh
Confidence 9999999999998 6788888887744445668999999999999 99999999999753
Q ss_pred ----CccccccCCCCCcHHHHHHHcCcHHHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCCCCCC
Q 009452 223 ----PVIINMVDAKGNSALHIATRKGRVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGKSIKP 296 (534)
Q Consensus 223 ----~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~~~~~ 296 (534)
+.+++.+|..|.||||.|+. .++|+.. +++.+|..|+||||+|+..|+.+++++|+++|+++......
T Consensus 244 ~~~~g~~~~~~~~~g~t~L~~a~~----~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 315 (327)
T 1sw6_A 244 TNEKESKPNDKNGERKDSILENLD----LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKS 315 (327)
T ss_dssp ----------------CHHHHHCS----HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTT
T ss_pred hhcccCCcccccccCCChhHHHHH----HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 67889999999999999986 5555555 68899999999999999999999999999999998655443
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=4.4e-30 Score=248.57 Aligned_cols=199 Identities=22% Similarity=0.252 Sum_probs=158.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH----hcCChhHHHHHHhcCCCCCcHHHHHH---HcCCHHHHHHHHHhCCc-----
Q 009452 20 AKRDDTPLQSLVRTGSVELVLDMIS----SYGDMELREMLSKMNQSGETALYVAA---EYGYVDMVREMIRYHDT----- 87 (534)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~l~~~n~~g~T~Lh~Aa---~~g~~~iv~~Ll~~~~~----- 87 (534)
+..|.++||.|++.|+.+.++.|++ .+.+.+... ...+..|.||||+|+ ..|+.+++++|++.+..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~--~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEE--FREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGG--GSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhh--hhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 5678899999999999997666655 665532211 123477999999999 77999999999997632
Q ss_pred ----ccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCC--------------CCCCcHHHHHHhcCCHHHHHH
Q 009452 88 ----SLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFD--------------SSNTTALHTASSQGHVEVVKF 149 (534)
Q Consensus 88 ----~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~tpLh~A~~~g~~~~v~~ 149 (534)
......+..|.||||+|+..|+.+++++|+++++++... | ..|.||||+|+..|+.+++++
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ-ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc-ccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 223344557899999999999999999999988876544 4 578999999999999999999
Q ss_pred HHh---cCCCchhhhhcCCCcHHHHHHHcCc---------HHHHHHHHhcCCCCc------ccCCCCCCcHHHHHHhCCC
Q 009452 150 LLE---KGSTLATIARSNGKTALHSAARNGH---------LEIVKALLSKEPGIV------LRNDKKGQTALHMAVKGQS 211 (534)
Q Consensus 150 Ll~---~~~~~~~~~~~~g~tpLh~A~~~g~---------~~iv~~Ll~~~~~~~------~~~d~~g~t~Lh~A~~~~~ 211 (534)
|++ +|+++ +..|..|.||||+|+..|+ .+++++|+++|+++. ...|..|+||||+|++.|+
T Consensus 159 Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 159 LTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 999 78887 6678889999999998777 688999998887763 3468889999999999999
Q ss_pred HHHHHHHhhcC
Q 009452 212 IELVDELVKVE 222 (534)
Q Consensus 212 ~~iv~~Ll~~~ 222 (534)
.+++++|++++
T Consensus 238 ~~~v~~Ll~~g 248 (260)
T 3jxi_A 238 IGIFQHIIRRE 248 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999998854
No 53
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.3e-28 Score=222.06 Aligned_cols=157 Identities=36% Similarity=0.491 Sum_probs=129.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCC
Q 009452 64 TALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGH 143 (534)
Q Consensus 64 T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 143 (534)
++|+.||+.|+.++|+.|++.| .+++.+|.+|+||||+|+..|+.++++.|++.++++.. +|.+|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHcCC
Confidence 4688899999999999999877 44667888899999999999999999999988887654 48888899999999999
Q ss_pred HHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCC
Q 009452 144 VEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEP 223 (534)
Q Consensus 144 ~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~ 223 (534)
.+++++|+++|+++ +.+|.+|+||||+|+..|+.+++++|+++++++... |..|+||||+|++.|+.+++++|++ .+
T Consensus 83 ~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~-~G 159 (169)
T 4gpm_A 83 KEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTS-DSDGRTPLDLAREHGNEEVVKLLEK-QG 159 (169)
T ss_dssp HHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHT-C-
T ss_pred HHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHH-CC
Confidence 99999999988887 567888889999999999999999998888887644 7888889999888888888888888 44
Q ss_pred ccc
Q 009452 224 VII 226 (534)
Q Consensus 224 ~~i 226 (534)
.++
T Consensus 160 A~i 162 (169)
T 4gpm_A 160 GWL 162 (169)
T ss_dssp ---
T ss_pred CCc
Confidence 433
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.7e-30 Score=249.06 Aligned_cols=212 Identities=19% Similarity=0.173 Sum_probs=132.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH----hCCccccc--ccccCCCcHHHHHH---HCCCHHHHHHHHhhCccc------
Q 009452 59 NQSGETALYVAAEYGYVDMVREMIR----YHDTSLAG--IKARNGYDAFHIAA---KQGCLEVLKILMEALPEL------ 123 (534)
Q Consensus 59 n~~g~T~Lh~Aa~~g~~~iv~~Ll~----~~~~~~~~--~~~~~g~t~Lh~Aa---~~g~~~iv~~Ll~~~~~~------ 123 (534)
+..|.|+||.|++.|+.+.++.|++ .+...... ..+..|.||||+|+ ..|+.+++++|++.+++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 5567778888888888775444444 55332221 12255777777777 557777777777765431
Q ss_pred ----cccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCC
Q 009452 124 ----LMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKG 199 (534)
Q Consensus 124 ----~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g 199 (534)
....|..|+||||+|+..|+.+++++|+++|+++. ..+..+.. .+......+..|
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~--------------------~~~~~~~~~~~g 140 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFF--------------------QPKDEGGYFYFG 140 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCC--------------------SSSCCCCSCCSC
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-cccccccc--------------------CcccccccccCC
Confidence 11123345555555555555555555555555542 22210000 000000112567
Q ss_pred CcHHHHHHhCCCHHHHHHHhhc--CCccccccCCCCCcHHHHHHHcCc-----------HHHHhhhcCCCh-------Hh
Q 009452 200 QTALHMAVKGQSIELVDELVKV--EPVIINMVDAKGNSALHIATRKGR-----------VQKLLNINGVDK-------AV 259 (534)
Q Consensus 200 ~t~Lh~A~~~~~~~iv~~Ll~~--~~~~in~~d~~G~T~Lh~Aa~~~~-----------~~~ll~~~g~~~-------~~ 259 (534)
.||||+|+..|+.+++++|++. .+.+++.+|.+|+||||+|+..++ +.++|+..|+++ +.
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 220 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEAL 220 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhc
Confidence 7777777777777777777774 456677777788888888876554 256777788887 67
Q ss_pred hhccCCcHHHHHHhcCchhHHHHHHhcCCCCC
Q 009452 260 INKSRETALDTAEKTGHSEIGVILKEHGVPCG 291 (534)
Q Consensus 260 ~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~ 291 (534)
.|..|.|||++|+..|+.+++++|+++|+...
T Consensus 221 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 221 LNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 88899999999999999999999999887643
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1e-28 Score=241.47 Aligned_cols=191 Identities=25% Similarity=0.277 Sum_probs=107.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHH
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFH 102 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh 102 (534)
..+++|.|+..|+.+.++.+++.+.+ ..++..|.+|.||||+|+..|+.+++++|++.+. .+.+..+..|.||||
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~----~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~tpL~ 150 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLD----YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGV-CKVDKQNRAGYSPIM 150 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHH----HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC-CCTTCCCTTSCCHHH
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHh----hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CcCCCCCCCCCCHHH
Confidence 34555666666666666665554321 2345555666666666666666666666666542 133445555666666
Q ss_pred HHH-----HCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCc
Q 009452 103 IAA-----KQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGH 177 (534)
Q Consensus 103 ~Aa-----~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~ 177 (534)
+|+ ..++.++++.|++.+.... ..|..|+||||+|+..|+.+++++|+++|+++ +..|.+|.||||+|+..|+
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCC
Confidence 666 3455566666666554332 23555666666666666666666666666554 4455556666666666666
Q ss_pred HHHHHHHHh-cCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhc
Q 009452 178 LEIVKALLS-KEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKV 221 (534)
Q Consensus 178 ~~iv~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 221 (534)
.+++++|++ .+.++.. .|..|+||||+|++.|+.+++++|++.
T Consensus 229 ~~iv~~Ll~~~gad~~~-~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISL-TDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHHHHHHTSTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcC-cCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 666666665 4444432 355566666666666666666666553
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.4e-28 Score=237.79 Aligned_cols=188 Identities=26% Similarity=0.299 Sum_probs=122.2
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCcc-ccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHH---
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPE-LLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAA--- 173 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~-~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~--- 173 (534)
.+++|.|+..|+.+.++.+++...+ ..+..|.+|.||||+|+..|+.+++++|++.|+......+..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 3456666666666666666655433 233446666666666666666666666666666333556666667777666
Q ss_pred --HcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHH
Q 009452 174 --RNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKL 249 (534)
Q Consensus 174 --~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~l 249 (534)
..++.+++++|++.+.... ..|..|+||||+|+..|+.+++++|++ .+.++|.+|.+|+||||+|+..|+. .++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 4566667777776664433 335666777777777777777777776 4556667777777777777776664 455
Q ss_pred hhh-cCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcC
Q 009452 250 LNI-NGVDKAVINKSRETALDTAEKTGHSEIGVILKEHG 287 (534)
Q Consensus 250 l~~-~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g 287 (534)
|+. .|++++..|..|.|||++|+..|+.+++++|++++
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 555 67777777777777777777777777777777654
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.7e-27 Score=217.23 Aligned_cols=164 Identities=27% Similarity=0.247 Sum_probs=143.6
Q ss_pred HHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCC
Q 009452 53 EMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNT 132 (534)
Q Consensus 53 ~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 132 (534)
.+++.+|..|.||||+|+..|+.+++++|++.+. ..+..+..|.||||+|+..|+.+++++|++.++++.. .|..|.
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~ 102 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFD--KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGK 102 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSC
T ss_pred HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc--ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCC
Confidence 3456778899999999999999999999999863 4566788899999999999999999999999887654 488899
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCH
Q 009452 133 TALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSI 212 (534)
Q Consensus 133 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~ 212 (534)
||||+|+..|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++++++... |..|.||||+|+..|+.
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGADISAR-DLTGLTAEASARIFGRQ 180 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCcH
Confidence 9999999999999999999999887 567888999999999999999999999998887644 88999999999999999
Q ss_pred HHHHHHhhc
Q 009452 213 ELVDELVKV 221 (534)
Q Consensus 213 ~iv~~Ll~~ 221 (534)
+++++|++.
T Consensus 181 ~~v~~Ll~~ 189 (192)
T 2rfm_A 181 EVIKIFTEV 189 (192)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999874
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2.2e-27 Score=214.65 Aligned_cols=170 Identities=22% Similarity=0.303 Sum_probs=119.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhc
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQ 141 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 141 (534)
+.||||.|+..|+.+++++|++.+. ...+..+..|.||||+|+..|+.+++++|++++++... .|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD-NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS-GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc-ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHC
Confidence 4577888888888888888887653 23455677778888888888888888888877766543 377778888888888
Q ss_pred CCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhc
Q 009452 142 GHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKV 221 (534)
Q Consensus 142 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 221 (534)
|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~- 156 (172)
T 3v30_A 80 GYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT-EADSGYTPMDLAVALGYRKVQQVIEN- 156 (172)
T ss_dssp TCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH-
T ss_pred CCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHhCcHHHHHHHHH-
Confidence 8888888888877776 55667777888888888888888888877777654 36777788888888888888887777
Q ss_pred CCccccccCCCCCcH
Q 009452 222 EPVIINMVDAKGNSA 236 (534)
Q Consensus 222 ~~~~in~~d~~G~T~ 236 (534)
.+..+..++..|.||
T Consensus 157 ~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 157 HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHSCC-------
T ss_pred HHHHHhcccCCCCCC
Confidence 344455566666655
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=3.5e-27 Score=213.30 Aligned_cols=170 Identities=20% Similarity=0.314 Sum_probs=116.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHH
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFH 102 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh 102 (534)
+.||||.|++.|+.+.++.|++.++. .++..+..|.||||+|+..|+.+++++|++.+ .+.+..+..|.||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~ 74 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN-----LVNKPDERGFTPLIWASAFGEIETVRFLLEWG--ADPHILAKERESALS 74 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG-----GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTCCCHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc-----cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCchhhcccCCCHHH
Confidence 45677777777777777777777652 35666777777777777777777777777776 334556677777777
Q ss_pred HHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHH
Q 009452 103 IAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVK 182 (534)
Q Consensus 103 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~ 182 (534)
+|+..|+.+++++|++++.++.. .|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.++++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 75 LASTGGYTDIVGLLLERDVDINI-YDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHhCcHHHHH
Confidence 77777777777777777766543 3677777777777777777777777777776 556677777777777777777777
Q ss_pred HHHhcCCCCcccCCCCCCcH
Q 009452 183 ALLSKEPGIVLRNDKKGQTA 202 (534)
Q Consensus 183 ~Ll~~~~~~~~~~d~~g~t~ 202 (534)
+|++++++.... +..|.||
T Consensus 153 ~L~~~~~~~~~~-~~~~~~p 171 (172)
T 3v30_A 153 VIENHILKLFQS-NLVPADP 171 (172)
T ss_dssp HHHHHHHHHSCC--------
T ss_pred HHHHHHHHHhcc-cCCCCCC
Confidence 777776654432 4444444
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.7e-27 Score=217.21 Aligned_cols=165 Identities=21% Similarity=0.237 Sum_probs=150.6
Q ss_pred HhhhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCccccccc
Q 009452 14 MKKQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIK 93 (534)
Q Consensus 14 ~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~ 93 (534)
...+..|..|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+. ..+..
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~ 97 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL------EDKDIEGSTALIWAVKNNRLGIAEKLLSKGS--NVNTK 97 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC--CTTCC
T ss_pred HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc------ccccccCccHHHHHHHcCCHHHHHHHHHCCC--CCCCC
Confidence 345678999999999999999999999999998763 5668899999999999999999999999874 46678
Q ss_pred ccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHH
Q 009452 94 ARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAA 173 (534)
Q Consensus 94 ~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~ 173 (534)
+..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...|..|.||||+|+
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASAR 175 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHH
Confidence 88999999999999999999999999888654 4899999999999999999999999999997 678899999999999
Q ss_pred HcCcHHHHHHHHhcC
Q 009452 174 RNGHLEIVKALLSKE 188 (534)
Q Consensus 174 ~~g~~~iv~~Ll~~~ 188 (534)
..|+.+++++|++.+
T Consensus 176 ~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 176 IFGRQEVIKIFTEVR 190 (192)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHhcc
Confidence 999999999999864
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.9e-27 Score=211.47 Aligned_cols=157 Identities=25% Similarity=0.373 Sum_probs=75.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHH
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFH 102 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh 102 (534)
..||||.|++.|+.+++++|++.+.+. +..+..|.||||+|+. |+.+++++|++.+ .+.+.++..|.||||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNV------NAQNGFGRTALQVMKL-GNPEIARRLLLRG--ANPDLKDRTGFAVIH 75 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCT------TCCCTTSCCHHHHCCS-SCHHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCc------cccCccCccHHHHHHc-CcHHHHHHHHHcC--CCCCCCCCCCCCHHH
Confidence 334555555555555555555544332 2334445555555555 5555555555543 223334444555555
Q ss_pred HHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHH
Q 009452 103 IAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVK 182 (534)
Q Consensus 103 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~ 182 (534)
+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|++.....+..|.||||+|+..|+.++++
T Consensus 76 ~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 55555555555555554444322 24445555555555555555555555544433344444555555555555555555
Q ss_pred HHHhcCC
Q 009452 183 ALLSKEP 189 (534)
Q Consensus 183 ~Ll~~~~ 189 (534)
+|+++|+
T Consensus 155 ~Ll~~GA 161 (162)
T 1ihb_A 155 LMQANGA 161 (162)
T ss_dssp HHHHTC-
T ss_pred HHHHhCC
Confidence 5554443
No 62
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=6.2e-30 Score=259.87 Aligned_cols=155 Identities=23% Similarity=0.245 Sum_probs=69.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCccc-ccccccCCCcHH
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSL-AGIKARNGYDAF 101 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~-~~~~~~~g~t~L 101 (534)
+.||||.|++.|+.++|++|++.+++... ....|..|.||||+||..|+.++|++|++.+++.. .+..+.+ .|||
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~---~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEI---VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSS---CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHH---HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 34555555555555555555554431100 01112234445555555555555555555442100 1111111 4555
Q ss_pred HHHHHCCCHHHHHHHHhhCccccc-cCCCCCCcHHHHHH-hcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHH
Q 009452 102 HIAAKQGCLEVLKILMEALPELLM-TFDSSNTTALHTAS-SQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLE 179 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~-~~d~~g~tpLh~A~-~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 179 (534)
|+|+..|+.+++++|++++++... ..|..|.||||+|+ ..|+.+++++|++.|+ .|.||||.|+.+|+.+
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTT
T ss_pred HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHH
Confidence 555555555555555555544322 12444555555555 5555555555555331 1345555555555555
Q ss_pred HHHHHHhcCC
Q 009452 180 IVKALLSKEP 189 (534)
Q Consensus 180 iv~~Ll~~~~ 189 (534)
++++|++.++
T Consensus 240 vv~lL~~~ga 249 (376)
T 2aja_A 240 VNPFIARHVN 249 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhcCc
Confidence 5555555443
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5.2e-27 Score=211.06 Aligned_cols=154 Identities=21% Similarity=0.281 Sum_probs=71.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhc
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQ 141 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 141 (534)
|.||||.|+..|+.+++++|++.+ ...+.++..|.||||+|+..|+.+++++|++.+++... .|..|.||||+|+..
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSK 79 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHc
Confidence 344444444444444444444443 22333444444444444444444444444444433322 244444444444444
Q ss_pred CCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 142 GHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 142 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI-ETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp TCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 4444444444444443 33344444555555555555555555544444332 24445555555555555555555444
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=8e-27 Score=209.85 Aligned_cols=160 Identities=21% Similarity=0.299 Sum_probs=134.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHH
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAF 101 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L 101 (534)
.|.||||.|++.|+.+++++|++.+ ..++..|..|.||||+|+..|+.+++++|++.+ .+.+..+..|.|||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE------NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG--ADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC------CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCcCCCCCcHH
Confidence 5788999999999999999999875 336778888899999999999999999999876 44566788889999
Q ss_pred HHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHH
Q 009452 102 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIV 181 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv 181 (534)
|+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.+++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999999998877654 4888899999999999999999999988887 56788889999999999999999
Q ss_pred HHHHhcCCCC
Q 009452 182 KALLSKEPGI 191 (534)
Q Consensus 182 ~~Ll~~~~~~ 191 (534)
++|++++.+.
T Consensus 152 ~~L~~~~~~~ 161 (167)
T 3v31_A 152 QVIESHLLKL 161 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998876554
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.5e-26 Score=208.62 Aligned_cols=155 Identities=31% Similarity=0.448 Sum_probs=83.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHh
Q 009452 61 SGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASS 140 (534)
Q Consensus 61 ~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 140 (534)
.+.|+|+.|++.|+.+++++|++.+ .+.+.++..|.||||+|+..|+.+++++|++++.+... .|..|.||||+|+.
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAAL 89 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred cccchHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHH
Confidence 3445555555555555555555544 22334445555555555555555555555555544332 25555555555555
Q ss_pred cCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 141 QGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 141 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
.|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|++.|+.+++++|++
T Consensus 90 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA-QDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 55555555555555554 33445555555555555555555555555555432 24555555555555555555555554
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.1e-26 Score=207.72 Aligned_cols=156 Identities=22% Similarity=0.281 Sum_probs=136.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHh
Q 009452 61 SGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASS 140 (534)
Q Consensus 61 ~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 140 (534)
...||||.|+..|+.+++++|++.+ ...+..+..|.||||+|+. |+.+++++|++.++++.. .|..|.||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAAR 79 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHH
Confidence 4578999999999999999999876 4456678889999999998 999999999999877654 48889999999999
Q ss_pred cCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 141 QGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 141 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
.|+.+++++|+++|+++ +..|.+|.||||+|+..|+.+++++|++++++.....|..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999887 56788899999999999999999999999988666678899999999999999999999998
Q ss_pred c
Q 009452 221 V 221 (534)
Q Consensus 221 ~ 221 (534)
.
T Consensus 159 ~ 159 (162)
T 1ihb_A 159 N 159 (162)
T ss_dssp T
T ss_pred h
Confidence 4
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.1e-29 Score=239.28 Aligned_cols=201 Identities=21% Similarity=0.161 Sum_probs=142.5
Q ss_pred HHHHHhCCccc-ccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCc
Q 009452 79 REMIRYHDTSL-AGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTL 157 (534)
Q Consensus 79 ~~Ll~~~~~~~-~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~ 157 (534)
+.|++.+.... ....+.+|.||||.|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.+++++|+++|+++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 44555543222 233445566778888888888888888877776543 4777888888888888888888888887776
Q ss_pred hhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHH--HhCCCHHHHHHHhhcCCccccccCCCCCc
Q 009452 158 ATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMA--VKGQSIELVDELVKVEPVIINMVDAKGNS 235 (534)
Q Consensus 158 ~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A--~~~~~~~iv~~Ll~~~~~~in~~d~~G~T 235 (534)
+..|..|.||||+|+..|+.+++++|++.++++....+..|+||||+| +..|+.+++++|++ .+.+++.+|..|.|
T Consensus 81 -n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~ 158 (229)
T 2vge_A 81 -NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD-VEQSMGLMNSGAVY 158 (229)
T ss_dssp -TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-HHHHTTTSGGGEEE
T ss_pred -CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHH-cCCCcccccCCchH
Confidence 556777888888888888888888888888777665446788888888 78888888888887 45567778888888
Q ss_pred HHHHHHHcCcHHHHhhhcCCC--hHhhhccCCcHHHHHHhcCchhHHHHH
Q 009452 236 ALHIATRKGRVQKLLNINGVD--KAVINKSRETALDTAEKTGHSEIGVIL 283 (534)
Q Consensus 236 ~Lh~Aa~~~~~~~ll~~~g~~--~~~~n~~g~T~l~~A~~~~~~~i~~~L 283 (534)
|+|.++.... ..+++..|++ ++.+|..|+|||++|+..|+.++++.+
T Consensus 159 ~l~~~~~~~~-~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 159 ALWDYSAEFG-DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp ESSCBCCSST-TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred HHHHHhhccc-cccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 8876554433 3456667777 667788888888888888888777653
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=3.7e-26 Score=206.12 Aligned_cols=161 Identities=24% Similarity=0.315 Sum_probs=119.5
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCC
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNG 97 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g 97 (534)
.....+.++||.|++.|+.++|++|++.+ ..++..|..|.||||+|+..|+.+++++|++.+ .+.+..+..|
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g 80 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANG------ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG--ADVNAVDHAG 80 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTS
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCC
Confidence 35566677888888888888888888764 235666777888888888888888888888765 3445567778
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCc
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGH 177 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~ 177 (534)
.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...|..|.||||+|+..|+
T Consensus 81 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 81 MTPLRLAALFGHLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISIDNGN 158 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCC
Confidence 8888888888888888888887776543 3777888888888888888888888888776 5567778888888888888
Q ss_pred HHHHHHHHhcC
Q 009452 178 LEIVKALLSKE 188 (534)
Q Consensus 178 ~~iv~~Ll~~~ 188 (534)
.+++++|++.|
T Consensus 159 ~~~~~~L~~~G 169 (169)
T 2y1l_E 159 EDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHHcC
Confidence 88888887654
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=4.4e-26 Score=201.99 Aligned_cols=150 Identities=26% Similarity=0.322 Sum_probs=91.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcC
Q 009452 63 ETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQG 142 (534)
Q Consensus 63 ~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 142 (534)
.|+||.|+..|+.+++++|++.+.+.. .+..|.||||+|+..|+.+++++|++.+++... .|..|.||||+|+..|
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHT
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcC
Confidence 356666666666666666666553221 355566666666666666666666666555432 3556666666666666
Q ss_pred CHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q 009452 143 HVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDEL 218 (534)
Q Consensus 143 ~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 218 (534)
+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|
T Consensus 79 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 79 HANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT-QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 666666666666665 44556666666666666666666666666665543 356666666666666666666654
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=4.5e-29 Score=237.03 Aligned_cols=197 Identities=18% Similarity=0.158 Sum_probs=156.4
Q ss_pred HHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHh
Q 009452 39 VLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILME 118 (534)
Q Consensus 39 v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~ 118 (534)
++.|++++.+++. .+..+..|.||||+|+..|+.+++++|++.+. +.+.++..|.||||+|+..|+.+++++|++
T Consensus 1 v~~ll~~~~~~~~---~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 75 (229)
T 2vge_A 1 MRSVLRKAGSPRK---ARRARLNPLVLLLDAALTGELEVVQQAVKEMN--DPSQPNEEGITALHNAICGANYSIVDFLIT 75 (229)
T ss_dssp ---------CCCC---CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CeehhccCCCCcc---ccccccchhHHHHHHHHcCCHHHHHHHHhcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4567777765421 23445677889999999999999999999874 456788999999999999999999999999
Q ss_pred hCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHH--HHcCcHHHHHHHHhcCCCCcccCC
Q 009452 119 ALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSA--ARNGHLEIVKALLSKEPGIVLRND 196 (534)
Q Consensus 119 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~d 196 (534)
.++++.. .|..|+||||+|+..|+.+++++|+++|+++....+.+|.||||+| +..|+.+++++|++.++++... |
T Consensus 76 ~ga~~n~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~-~ 153 (229)
T 2vge_A 76 AGANVNS-PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM-N 153 (229)
T ss_dssp TTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS-G
T ss_pred CCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc-c
Confidence 9887654 4889999999999999999999999999998554457899999999 9999999999999999887654 7
Q ss_pred CCCCcHHHHHHhCCCHHHHHHHhhcCCcc--ccccCCCCCcHHHHHHHcCcH
Q 009452 197 KKGQTALHMAVKGQSIELVDELVKVEPVI--INMVDAKGNSALHIATRKGRV 246 (534)
Q Consensus 197 ~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~--in~~d~~G~T~Lh~Aa~~~~~ 246 (534)
..|.|++|.++..+.. ++|++ .+.+ ++.+|.+|+||||+|+..|+.
T Consensus 154 ~~~~~~l~~~~~~~~~---~~ll~-~ga~~~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 154 SGAVYALWDYSAEFGD---ELSFR-EGESVTVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp GGEEEESSCBCCSSTT---BCCBC-TTCEEEEEESSCTTCSSEEEEEETTEE
T ss_pred CCchHHHHHHhhcccc---ccCcc-ccccccccccCCCcccHHHHHHHcCCc
Confidence 7888998866655433 45566 3444 788999999999999999985
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=5.4e-26 Score=201.88 Aligned_cols=153 Identities=25% Similarity=0.377 Sum_probs=119.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhc
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQ 141 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 141 (534)
|.||||.|+..|+.+++++|++. ...+.+..+..|.||||+ +..|+.+++++|++.++++.. .|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHc
Confidence 45788888888888888888876 444566677788888888 778888888888888776543 477888888888888
Q ss_pred CCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 142 GHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 142 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|++. .++. ..|..|.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 79 GFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp TCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred CcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 8888888888888776 55677788888888888888888888877 5544 347788888888888888888888876
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=5.7e-26 Score=201.27 Aligned_cols=151 Identities=23% Similarity=0.319 Sum_probs=137.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHH
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFH 102 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh 102 (534)
..++||.|++.|+.+++++|++.+.+.. .+..|.||||+|+..|+.+++++|++.+ ...+..+..|.||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~ 72 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-------TDWLGTSPLHLAAQYGHFSTTEVLLRAG--VSRDARTKVDRTPLH 72 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-------CCTTCCCHHHHHHHHTCHHHHHHHHTTT--CCTTCCCTTCCCHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHH
Confidence 4589999999999999999999987532 4788999999999999999999999987 445678889999999
Q ss_pred HHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHH
Q 009452 103 IAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVK 182 (534)
Q Consensus 103 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~ 182 (534)
+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.++++
T Consensus 73 ~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 73 MAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcChHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999888654 4899999999999999999999999999997 667889999999999999999999
Q ss_pred HH
Q 009452 183 AL 184 (534)
Q Consensus 183 ~L 184 (534)
+|
T Consensus 151 ~L 152 (153)
T 1awc_B 151 IL 152 (153)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.2e-26 Score=208.17 Aligned_cols=156 Identities=25% Similarity=0.327 Sum_probs=73.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHH
Q 009452 60 QSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTAS 139 (534)
Q Consensus 60 ~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 139 (534)
.+|.||||.|+..|+.+++++|++.+. ......+..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~ 83 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHNAC 83 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHHHH
Confidence 334444444444444444444444321 22233334444555555555555555555544444322 2444555555555
Q ss_pred hcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHh
Q 009452 140 SQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELV 219 (534)
Q Consensus 140 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll 219 (534)
..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++++.++.. +|..|+||||+|++ ++.+++++|+
T Consensus 84 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK-KNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred HcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCChhHhHhc-CChHHHHHHh
Confidence 555555555555554444 33444455555555555555555555555444332 24455555555433 4445555554
Q ss_pred h
Q 009452 220 K 220 (534)
Q Consensus 220 ~ 220 (534)
+
T Consensus 161 ~ 161 (165)
T 3twr_A 161 G 161 (165)
T ss_dssp T
T ss_pred h
Confidence 4
No 74
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=1.8e-28 Score=249.05 Aligned_cols=211 Identities=20% Similarity=0.202 Sum_probs=159.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCcc-cccccccCCCcHHHHHHHCCCHHHHHHHHhhCccc--cccCCCCCCcHH
Q 009452 59 NQSGETALYVAAEYGYVDMVREMIRYHDTS-LAGIKARNGYDAFHIAAKQGCLEVLKILMEALPEL--LMTFDSSNTTAL 135 (534)
Q Consensus 59 n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~-~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~--~~~~d~~g~tpL 135 (534)
+.++.||||+||..|+.++|++|++.+.+. .....+..|.||||+|+..|+.+++++|++++++. ....+.+ .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 445679999999999999999999987532 11234556889999999999999999999999642 1111222 8999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCchh-hhhcCCCcHHHHHH-HcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHH
Q 009452 136 HTASSQGHVEVVKFLLEKGSTLAT-IARSNGKTALHSAA-RNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIE 213 (534)
Q Consensus 136 h~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~g~tpLh~A~-~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 213 (534)
|+|+..|+.+++++|+++|+++.. ..|..|.||||+|+ .+|+.+++++|++.+. .|.||||.|+.+|+.+
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTT
T ss_pred HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHH
Confidence 999999999999999999998733 27788999999999 9999999999998653 3789999999999999
Q ss_pred HHHHHhhcCCccccccCCCCCcHHHHHHHcCcH-----------------------------HHHhhh---------cCC
Q 009452 214 LVDELVKVEPVIINMVDAKGNSALHIATRKGRV-----------------------------QKLLNI---------NGV 255 (534)
Q Consensus 214 iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~-----------------------------~~ll~~---------~g~ 255 (534)
++++|++. +.+++..|. +++.|+..|+. ..+|+. .|+
T Consensus 240 vv~lL~~~-ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~ 314 (376)
T 2aja_A 240 VNPFIARH-VNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 314 (376)
T ss_dssp HHHHHHHH-HHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCS
T ss_pred HHHHHHhc-CcccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCC
Confidence 99999984 444444332 23333333221 122222 233
Q ss_pred ChHhhhccCCcHHHHHHhcCchhHHHHHHhcC
Q 009452 256 DKAVINKSRETALDTAEKTGHSEIGVILKEHG 287 (534)
Q Consensus 256 ~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g 287 (534)
++ +.+.||+++|+..|+.+++++|++.|
T Consensus 315 ~~----n~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 315 IP----GDANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp ST----TCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred CC----CCccHHHHHHHHcCcHHHHHHHHcCh
Confidence 33 45678999999999999999999765
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=5.4e-28 Score=231.14 Aligned_cols=207 Identities=18% Similarity=0.186 Sum_probs=108.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHh
Q 009452 61 SGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASS 140 (534)
Q Consensus 61 ~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 140 (534)
.|.||||.|+..|+.+.++.|++.+..... +..|.||||.|+..|+.+++++|++.++++. ..|..|.||||+|+.
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS-LPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-CCCTTSCCHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH
Confidence 456666666666666666666665533221 2455666666666666666666666665433 336666666666666
Q ss_pred cCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHH--HhCCCHHHHHHH
Q 009452 141 QGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMA--VKGQSIELVDEL 218 (534)
Q Consensus 141 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A--~~~~~~~iv~~L 218 (534)
.|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++++++....+..++||||+| +..|+.+++++|
T Consensus 80 ~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 66666666666666665 445666666666666666666666666666665544223333666666 556666666666
Q ss_pred hhcCCcccc---------ccCCCCCcHHHHHHHcCcHHHHhhhcCCC------hHhhhccCCcHHHHHHh
Q 009452 219 VKVEPVIIN---------MVDAKGNSALHIATRKGRVQKLLNINGVD------KAVINKSRETALDTAEK 273 (534)
Q Consensus 219 l~~~~~~in---------~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~~------~~~~n~~g~T~l~~A~~ 273 (534)
++. +.+++ ..|..|.++++++...|....++...+.+ ....+..|.+|.++...
T Consensus 159 l~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~ 227 (239)
T 1ycs_B 159 YGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGL 227 (239)
T ss_dssp HHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEEC
T ss_pred HHh-hhcccccccceEEEEeccCCCCCCcccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeehHHeeE
Confidence 663 22222 23677888888888888765555554433 23456778888776543
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=8.1e-26 Score=205.82 Aligned_cols=155 Identities=19% Similarity=0.277 Sum_probs=69.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhc
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQ 141 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 141 (534)
+.++||.|+..|+.+++++|++.+ +.+.+..+..|.||||+|+..|+.+++++|++.+.++.. .|..|.||||+|+..
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASH 82 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHc
Confidence 344444444444444444444432 122333444444444444444444444444444443322 244444444444444
Q ss_pred CCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 142 GHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 142 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..++.+++++|++
T Consensus 83 ~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI-CNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB-CCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch-hccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 4444444444444443 33344444444444444444444444444444332 24444444444444444444444444
No 77
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=5.1e-26 Score=207.16 Aligned_cols=162 Identities=23% Similarity=0.324 Sum_probs=90.2
Q ss_pred CCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcC
Q 009452 97 GYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNG 176 (534)
Q Consensus 97 g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 176 (534)
+.++||.|+..|+.+++++|++.++...+..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcC
Confidence 4555666666666666666666544444444555666666666666666666666655554 334555555555555555
Q ss_pred cHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcHHHHhhhcCCC
Q 009452 177 HLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQKLLNINGVD 256 (534)
Q Consensus 177 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~~ 256 (534)
+.+++++|+++++++... |..|.||||+|+..|+.+++++|++ .|++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~--------------------------------~ga~ 130 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAV-NEHGNVPLHYACFWGQDQVAEDLVA--------------------------------NGAL 130 (179)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH--------------------------------TTCC
T ss_pred CHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHH--------------------------------CCCC
Confidence 555555555555554332 4555555555555555555555554 4555
Q ss_pred hHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCCCC
Q 009452 257 KAVINKSRETALDTAEKTGHSEIGVILKEHGVPCGK 292 (534)
Q Consensus 257 ~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~~~ 292 (534)
++..|..|.||+++|...++.+++++|+++|++...
T Consensus 131 ~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 131 VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred cchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 555555555555555555556666666666666543
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=4.1e-26 Score=204.75 Aligned_cols=156 Identities=29% Similarity=0.350 Sum_probs=76.8
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhC
Q 009452 130 SNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKG 209 (534)
Q Consensus 130 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 209 (534)
+|.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|+++++++... |..|.||||+|+..
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK-DKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCcc-CCCCCCHHHHHHHc
Confidence 34444444444444444444444332222333334444444444444444444444444443322 44444555555555
Q ss_pred CCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcC
Q 009452 210 QSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHG 287 (534)
Q Consensus 210 ~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g 287 (534)
|+.+++++|++ .+.+++.+|..|+||||+|+..++. .++|+..|++++.+|..|.||+++|.. ++.+++++|+++|
T Consensus 86 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 86 GHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred CcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 55555555444 3344455555555555555555543 344445556666666666666666554 6667777777766
Q ss_pred C
Q 009452 288 V 288 (534)
Q Consensus 288 ~ 288 (534)
+
T Consensus 164 A 164 (165)
T 3twr_A 164 A 164 (165)
T ss_dssp -
T ss_pred c
Confidence 4
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.8e-25 Score=198.48 Aligned_cols=155 Identities=26% Similarity=0.380 Sum_probs=138.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHH
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAF 101 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L 101 (534)
++.||||.|++.|+.+++++|++... ..++..+..|.||||+ +..|+.+++++|++.+ .+.+.++..|.|||
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L 72 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHREL-----VHPDALNRFGKTALQV-MMFGSTAIALELLKQG--ASPNVQDTSGTSPV 72 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTC-----CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT--CCTTCCCTTSCCHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhC-----cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC--CCCCCcCCCCCCHH
Confidence 35789999999999999999999831 1135678899999999 9999999999999987 45667889999999
Q ss_pred HHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHH
Q 009452 102 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIV 181 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv 181 (534)
|+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|++. +++ ...|..|.||||+|+..|+.+++
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCCHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999999999987654 488999999999999999999999999 665 67889999999999999999999
Q ss_pred HHHHhc
Q 009452 182 KALLSK 187 (534)
Q Consensus 182 ~~Ll~~ 187 (534)
++|+++
T Consensus 150 ~~Ll~~ 155 (156)
T 1bd8_A 150 DILQGH 155 (156)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 999875
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=5.6e-26 Score=217.11 Aligned_cols=208 Identities=20% Similarity=0.184 Sum_probs=140.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCc
Q 009452 20 AKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYD 99 (534)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t 99 (534)
+..|.||||.|++.|+.+.++.|++.|.+.+ .+..|.||||.|+..|+.+++++|++.+. +.+.+|..|.|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~-------~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~d~~g~t 72 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK-------FNPLPLALLLDSSLEGEFDLVQRIIYEVD--DPSLPNDEGIT 72 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS--SCCCCCTTSCC
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc-------cCchhhHHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCC
Confidence 4569999999999999999999999997643 24678999999999999999999999874 56778999999
Q ss_pred HHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCC-cHHHHH--HHcC
Q 009452 100 AFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGK-TALHSA--ARNG 176 (534)
Q Consensus 100 ~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-tpLh~A--~~~g 176 (534)
|||+|+..|+.+++++|+++++++.. .|..|+||||+|+..|+.+++++|+++|+++. ..+..|. ||||+| +..|
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a~~~~~g 150 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEMEEG 150 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSSSTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHHHHhhhc
Confidence 99999999999999999999988654 58999999999999999999999999999984 4555554 999999 7899
Q ss_pred cHHHHHHHHhcCCCCccc--------CCCCCCcHHHHHHhCCCHHHHHHHhhcCCc-----cccccCCCCCcHHHHH
Q 009452 177 HLEIVKALLSKEPGIVLR--------NDKKGQTALHMAVKGQSIELVDELVKVEPV-----IINMVDAKGNSALHIA 240 (534)
Q Consensus 177 ~~~iv~~Ll~~~~~~~~~--------~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~-----~in~~d~~G~T~Lh~A 240 (534)
+.+++++|++.+++.... .+..++++++++++.|. +++.+.+.... .....+..|.+|.++.
T Consensus 151 ~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv 225 (239)
T 1ycs_B 151 YTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDEDEIEWWWARLNDKEGYVPRNLL 225 (239)
T ss_dssp CCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTSCSSEEEEEETTEEEEEEGGGE
T ss_pred cHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCCCCCEEEEEECCcEEEeehHHe
Confidence 999999999987765432 26678999999988886 33334332211 0123455566666654
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.3e-23 Score=180.58 Aligned_cols=128 Identities=22% Similarity=0.323 Sum_probs=72.3
Q ss_pred hcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCC-CCcHH
Q 009452 57 KMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSS-NTTAL 135 (534)
Q Consensus 57 ~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~-g~tpL 135 (534)
..+..|.||||+|+..|+.+++++|++.+ .+.+.++..|.||||+|+. |+.+++++|+++++++... |.. |.|||
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~-~~~~g~t~L 82 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA-DPATLTRPV 82 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC-BTTTTBCHH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc-CCCCCCCHH
Confidence 34555566666666666666666666554 2334455556666666666 6666666666655554332 444 55666
Q ss_pred HHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 009452 136 HTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEP 189 (534)
Q Consensus 136 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~ 189 (534)
|+|+..|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 6666666666666666655554 3445555566666665566666665555544
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=1.9e-23 Score=191.31 Aligned_cols=153 Identities=17% Similarity=0.131 Sum_probs=123.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccc-cCCCcHHHHHHHCCCH----HHHHHHHhhCccccccCCCCCCcHHH
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKA-RNGYDAFHIAAKQGCL----EVLKILMEALPELLMTFDSSNTTALH 136 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~-~~g~t~Lh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpLh 136 (534)
+.++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+..|+. +++++|+++++++... |..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~----~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY----EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSR-TKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS----SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCC-CTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCC-CCCCCcHHH
Confidence 4578888999999888888887652 2233 6688999999988875 4889999888876544 888999999
Q ss_pred HHHhcCC------HHHHHHHHhcCCCchhhhhcCCC-cHHHHHHHcC-----cHHHHHHHHh-cCCCCcccCCCCCCcHH
Q 009452 137 TASSQGH------VEVVKFLLEKGSTLATIARSNGK-TALHSAARNG-----HLEIVKALLS-KEPGIVLRNDKKGQTAL 203 (534)
Q Consensus 137 ~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-tpLh~A~~~g-----~~~iv~~Ll~-~~~~~~~~~d~~g~t~L 203 (534)
+|+..|+ .+++++|+++|+++ +.+|..|. ||||+|+..| +.+++++|++ +|+++... |..|+|||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~-d~~G~TpL 158 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK-DKWGLTAL 158 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC-CTTSCCHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc-CCCCCCHH
Confidence 9988876 57899999999887 66788888 9999998844 4668899998 88887644 88899999
Q ss_pred HHHHhCCCHHHHHHHhhc
Q 009452 204 HMAVKGQSIELVDELVKV 221 (534)
Q Consensus 204 h~A~~~~~~~iv~~Ll~~ 221 (534)
|+|++.|+.+++++|.+.
T Consensus 159 ~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 159 EFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHTTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHH
Confidence 999999999999888873
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=2.7e-23 Score=184.74 Aligned_cols=140 Identities=21% Similarity=0.193 Sum_probs=68.5
Q ss_pred ccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCc-HHHHH
Q 009452 94 ARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKT-ALHSA 172 (534)
Q Consensus 94 ~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-pLh~A 172 (534)
+..|.||||+|+..|+.+++++|+++++++.. .|..|+||||+|+ .|+.+++++|+++|+++ +..+..|.| |||+|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDA 85 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence 34455555555555555555555555544332 2555555555553 55555555555555554 344555555 66666
Q ss_pred HHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHH
Q 009452 173 ARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALH 238 (534)
Q Consensus 173 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh 238 (534)
+..|+.+++++|+++++++... |..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||.+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVR-DAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHSS-CC---------------
T ss_pred HHCCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccc
Confidence 6555566666665555554432 5555666666666666666666555 34455555555555554
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=2.3e-23 Score=190.84 Aligned_cols=155 Identities=15% Similarity=0.106 Sum_probs=135.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCH----HHHHHHHHhCCcccccccccCCC
Q 009452 23 DDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYV----DMVREMIRYHDTSLAGIKARNGY 98 (534)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~----~iv~~Ll~~~~~~~~~~~~~~g~ 98 (534)
+.++|+.|++.|+.+.++.++..+.+.. .+..|.||||+|+..|+. +++++|++.| .+++.++..|.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~-------~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G--advn~~d~~g~ 76 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDK-------ESVLKSNILYDVLRNNNDEARYKISMFLINKG--ADIKSRTKEGT 76 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCH-------HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT--CCSSCCCTTCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccc-------cccCCCCHHHHHHHcCCcchHHHHHHHHHHCC--CCCCCCCCCCC
Confidence 5689999999999999999998875421 125699999999999985 5999999987 45677899999
Q ss_pred cHHHHHHHCCC------HHHHHHHHhhCccccccCCCCCC-cHHHHHHhcC-----CHHHHHHHHh-cCCCchhhhhcCC
Q 009452 99 DAFHIAAKQGC------LEVLKILMEALPELLMTFDSSNT-TALHTASSQG-----HVEVVKFLLE-KGSTLATIARSNG 165 (534)
Q Consensus 99 t~Lh~Aa~~g~------~~iv~~Ll~~~~~~~~~~d~~g~-tpLh~A~~~g-----~~~~v~~Ll~-~~~~~~~~~~~~g 165 (534)
||||+|+..|+ .+++++|+++++++... |..|+ ||||+|+..+ +.+++++|++ +|+++ ...|..|
T Consensus 77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~-d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G 154 (186)
T 3t8k_A 77 TLFFPLFQGGGNDITGTTELCKIFLEKGADITAL-YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWG 154 (186)
T ss_dssp CTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSC-BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTS
T ss_pred cHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCcc-CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCC
Confidence 99999999987 68899999999987654 88999 9999999954 4679999999 99997 7789999
Q ss_pred CcHHHHHHHcCcHHHHHHHHhcC
Q 009452 166 KTALHSAARNGHLEIVKALLSKE 188 (534)
Q Consensus 166 ~tpLh~A~~~g~~~iv~~Ll~~~ 188 (534)
.||||+|+..|+.+++++|.++.
T Consensus 155 ~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 155 LTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999999999999998764
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=4.5e-23 Score=183.26 Aligned_cols=144 Identities=19% Similarity=0.228 Sum_probs=105.7
Q ss_pred hcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCc-HH
Q 009452 57 KMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTT-AL 135 (534)
Q Consensus 57 ~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-pL 135 (534)
..+..|.||||+|+..|+.+++++|++.+ .+.+..+..|.||||+|+ .|+.+++++|++++.++.. .|..|.| ||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL 82 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPV 82 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHH
Confidence 44677889999999999999999999876 445667888999999885 8899999999988877544 4888888 99
Q ss_pred HHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHH
Q 009452 136 HTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMA 206 (534)
Q Consensus 136 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A 206 (534)
|+|+..|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++|+++... +..|.|+.+-+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS-NHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc-CcCcCcccccC
Confidence 9999999999999999998887 567888999999999999999999999998887654 77888877643
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1.7e-22 Score=175.17 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=109.8
Q ss_pred ccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcC-CC
Q 009452 88 SLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSN-GK 166 (534)
Q Consensus 88 ~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-g~ 166 (534)
.+.+..+..|.||||+|+..|+.+++++|++++.++. ..|..|+||||+|+. |+.+++++|+++|+++ ...+.. |.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~ 79 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLT 79 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCC
Confidence 3456678889999999999999999999999887654 448889999999999 9999999999998887 556777 89
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhc
Q 009452 167 TALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKV 221 (534)
Q Consensus 167 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 221 (534)
||||+|+..|+.+++++|+++++++... |..|.||||+|+..++.+++++|++.
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVC-DAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCC-SSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999988886544 78899999999999999999998874
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=7.5e-22 Score=167.82 Aligned_cols=125 Identities=42% Similarity=0.635 Sum_probs=80.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHh
Q 009452 61 SGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASS 140 (534)
Q Consensus 61 ~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 140 (534)
+|.||||+|+..|+.+++++|++.+. ..+..+..|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHH
Confidence 35666777777777777766666652 3344556666666666666666666666666655432 35666666666666
Q ss_pred cCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCC
Q 009452 141 QGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEP 189 (534)
Q Consensus 141 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~ 189 (534)
.|+.+++++|+++|+++ ...|..|.||||+|+..|+.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 66666666666666665 4455666666666666666666666666654
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=6.4e-22 Score=171.48 Aligned_cols=125 Identities=26% Similarity=0.354 Sum_probs=81.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHH
Q 009452 60 QSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTAS 139 (534)
Q Consensus 60 ~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 139 (534)
..|.||||+|+..|+.+++++|++.+ .+.+..+..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~ 88 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAA 88 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHH
Confidence 44567777777777777777777665 33445566677777777777777777777776665433 3666677777777
Q ss_pred hcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcC
Q 009452 140 SQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKE 188 (534)
Q Consensus 140 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~ 188 (534)
..|+.+++++|+++|+++ ...|.+|.||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 777777777777766665 445666667777777666667666666543
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=2.1e-21 Score=165.00 Aligned_cols=126 Identities=35% Similarity=0.541 Sum_probs=114.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHH
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAF 101 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L 101 (534)
+|.||||.|++.|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+ ...+.++..|.|||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~l 72 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV------NAKDKNGRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPL 72 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC------CCcCCCCCcHHHHHHHcCcHHHHHHHHHcC--CCCcccCCCCCcHH
Confidence 5899999999999999999999998763 556889999999999999999999999987 44567888999999
Q ss_pred HHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 009452 102 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGST 156 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~ 156 (534)
|+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|+++|++
T Consensus 73 ~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 73 HLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHcChHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999887654 489999999999999999999999999875
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.1e-21 Score=170.00 Aligned_cols=128 Identities=20% Similarity=0.291 Sum_probs=113.7
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCC
Q 009452 18 LTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNG 97 (534)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g 97 (534)
-....+.||||+|++.|+.+++++|++.+.+. +..|..|.||||+|+..|+.+++++|++.+ .+.+..|..|
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~d~~g 80 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV------NAKDEYGLTPLYLATAHGHLEIVEVLLKNG--ADVNAVDAIG 80 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTC
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCC------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcCCCCC
Confidence 34567889999999999999999999998763 566889999999999999999999999986 4566788899
Q ss_pred CcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 009452 98 YDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKG 154 (534)
Q Consensus 98 ~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~ 154 (534)
.||||+|+..|+.+++++|++++++... .|..|.||||+|+..|+.+++++|++.|
T Consensus 81 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 81 FTPLHLAAFIGHLEIAEVLLKHGADVNA-QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcC-cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999888654 4899999999999999999999999875
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=6.8e-22 Score=180.56 Aligned_cols=141 Identities=26% Similarity=0.291 Sum_probs=112.3
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHH
Q 009452 128 DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAV 207 (534)
Q Consensus 128 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 207 (534)
+..|.||||+|+..|+.+++++|++ +.++ +..|..|.||||+|+..|+.+++++|++++++++...+..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 3467788888888888888888888 6665 5567778888888888888888888888888776654477888888888
Q ss_pred hCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcHHHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhc
Q 009452 208 KGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEH 286 (534)
Q Consensus 208 ~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~ 286 (534)
..|+.+++++|++ .+.+++.+|.+|+||||+|+..++ ...+.+++++|+..|+.+++++|.++
T Consensus 119 ~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~---------------~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 119 GYVRPEVVEALVE-LGADIEVEDERGLTALELAREILK---------------TTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHHH---------------TCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred hcCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHHhcc---------------CcccccHHHHHHHcCHHHHHHHHHHh
Confidence 8888888888888 456788888999999999986432 24567899999999999999998764
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=8.9e-22 Score=179.78 Aligned_cols=140 Identities=21% Similarity=0.188 Sum_probs=122.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHH
Q 009452 59 NQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTA 138 (534)
Q Consensus 59 n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 138 (534)
+..|.||||+|+..|+.++++.|++ + .+.+.++..|.||||+|+..|+.+++++|+++++++....+..|+||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 4578899999999999999999998 4 456778899999999999999999999999999887665348899999999
Q ss_pred HhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHH
Q 009452 139 SSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDEL 218 (534)
Q Consensus 139 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~L 218 (534)
+..|+.+++++|+++|+++ ...|.+|.||||+|+..++. ..+.++|+.|+..|+.+++++|
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHH
Confidence 9999999999999999987 67889999999999875432 4567899999999999999998
Q ss_pred hh
Q 009452 219 VK 220 (534)
Q Consensus 219 l~ 220 (534)
.+
T Consensus 179 ~~ 180 (183)
T 3deo_A 179 EG 180 (183)
T ss_dssp HT
T ss_pred HH
Confidence 76
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.1e-21 Score=187.95 Aligned_cols=169 Identities=18% Similarity=0.133 Sum_probs=131.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHH
Q 009452 22 RDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAF 101 (534)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~L 101 (534)
.+.+++..+...|+.+.+..+...+ ...+..|.||||+|+..|+.++++.|++ + .+.+.++..|.|||
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~---------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L 81 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIA---------ADVVSEYETPWWTAARKADEQALSQLLE-D--RDVDAVDENGRTAL 81 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSC---------HHHHHHHHHHHHHHHTTTCHHHHHHTTT-T--CCTTCBCTTSCBHH
T ss_pred CCccHHHHHHHcCCCcccccccccc---------cccccCCCCHHHHHHHcCCHHHHHHHHc-C--CCCCCcCCCCCCHH
Confidence 3445555555555555444433322 1224568899999999999999999998 4 45667888899999
Q ss_pred HHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHH
Q 009452 102 HIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIV 181 (534)
Q Consensus 102 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv 181 (534)
|+|+..|+.+++++|+++++++....+..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..++
T Consensus 82 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~---- 156 (244)
T 3ui2_A 82 LFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK---- 156 (244)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT----
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh----
Confidence 99999999999999999988876654478999999999999999999999999887 5678889999999985221
Q ss_pred HHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhc
Q 009452 182 KALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKV 221 (534)
Q Consensus 182 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 221 (534)
+..+.||||+|+..|+.+++++|++.
T Consensus 157 --------------~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 157 --------------TTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp --------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 35678999999999999999998873
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=5.2e-21 Score=183.17 Aligned_cols=144 Identities=25% Similarity=0.265 Sum_probs=112.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHH
Q 009452 128 DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAV 207 (534)
Q Consensus 128 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 207 (534)
+..|.||||+|+..|+.+++++|++ +.++ +..|..|.||||+|+..|+.+++++|++++++++...+..|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 3457788888888888888888887 6665 5567778888888888888888888888888776654477888888888
Q ss_pred hCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcHHHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcC
Q 009452 208 KGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRVQKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHG 287 (534)
Q Consensus 208 ~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g 287 (534)
..|+.+++++|++ .+.+++.+|..|+||||+|+..+ .+..+.||+++|+..|+.+++++|.+++
T Consensus 120 ~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~---------------~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 120 GYVRPEVVEALVE-LGADIEVEDERGLTALELAREIL---------------KTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHH---------------TTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHH---------------hccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 8888888888888 46778888888888888887522 2356788999999999999999998765
Q ss_pred CC
Q 009452 288 VP 289 (534)
Q Consensus 288 ~~ 289 (534)
.+
T Consensus 184 ~~ 185 (244)
T 3ui2_A 184 FE 185 (244)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1.6e-21 Score=169.08 Aligned_cols=124 Identities=24% Similarity=0.355 Sum_probs=66.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHH
Q 009452 59 NQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTA 138 (534)
Q Consensus 59 n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 138 (534)
|..|.||||+|+..|+.+++++|++.+ .+.+.++..|.||||+|+..|+.+++++|++++.++.. .|..|.||||+|
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A 83 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDSPLHDA 83 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCCHHHHH
Confidence 455556666666666666666655544 23344455555555555555555555555555544332 255555555555
Q ss_pred HhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHh
Q 009452 139 SSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLS 186 (534)
Q Consensus 139 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~ 186 (534)
+..|+.+++++|+++|+++ ...|..|.||||+|+..+..+++++|.+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 5555555555555555554 4445555555555555555555544443
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=2.9e-21 Score=167.39 Aligned_cols=126 Identities=26% Similarity=0.336 Sum_probs=93.5
Q ss_pred ccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHH
Q 009452 92 IKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHS 171 (534)
Q Consensus 92 ~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 171 (534)
.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+..|+.+++++|+++|+++ ...|..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHH
Confidence 456778888888888888888888888776654 34777888888888888888888888887776 5567777788888
Q ss_pred HHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 172 AARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 172 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
|+..|+.+++++|+++++++.. .|..|.||||+|+..+..+++++|.+
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASRNA-VNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC-CCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhccHHHHHhhccc
Confidence 8888888888888877777654 37777888888877777777666654
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=186.05 Aligned_cols=137 Identities=21% Similarity=0.233 Sum_probs=69.9
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCCchhh-----hhcCCCcHHHHHHHc---CcHHHHHHHHhcCCCCcccCCCCCCcHH
Q 009452 132 TTALHTASSQGHVEVVKFLLEKGSTLATI-----ARSNGKTALHSAARN---GHLEIVKALLSKEPGIVLRNDKKGQTAL 203 (534)
Q Consensus 132 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~L 203 (534)
.++|+.|+..|+.+.++.|++.|+++... .+..|.||||+|+.. |+.+++++|++++++++.. |..|+|||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~-d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK-AADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCC-CTTCCCHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCC-CCCCCCHH
Confidence 34555555555555555555555554221 344555555555554 5555555555555554332 45555555
Q ss_pred HHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHHHHhcCc
Q 009452 204 HMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDTAEKTGH 276 (534)
Q Consensus 204 h~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~ 276 (534)
|+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++. .++|+..|++ .|.||||+|+..|+
T Consensus 231 h~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-------
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCC
Confidence 55555555555555555 3445555555555555555555553 3444444432 35566666555554
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=186.29 Aligned_cols=143 Identities=20% Similarity=0.173 Sum_probs=113.8
Q ss_pred ccCCCcHHHHHHHCCCHHHHHHHHhhCcccccc-----CCCCCCcHHHHHHhc---CCHHHHHHHHhcCCCchhhhhcCC
Q 009452 94 ARNGYDAFHIAAKQGCLEVLKILMEALPELLMT-----FDSSNTTALHTASSQ---GHVEVVKFLLEKGSTLATIARSNG 165 (534)
Q Consensus 94 ~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g 165 (534)
...+.++||.|+..|+.+.++.|++.++++... .|..|.||||+|+.. |+.+++++|+++|+++ +..|.+|
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G 226 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADG 226 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCC
Confidence 344567899999999999999999888876543 478899999999986 8899999999999887 5678889
Q ss_pred CcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCc
Q 009452 166 KTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGR 245 (534)
Q Consensus 166 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~ 245 (534)
.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..|+.+++++|++.... .|.||||+|+..|+
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSC-CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 9999999999999999999999888764 488899999999999999999999984332 57899999998775
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.6e-20 Score=159.47 Aligned_cols=110 Identities=27% Similarity=0.369 Sum_probs=65.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHH
Q 009452 60 QSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTAS 139 (534)
Q Consensus 60 ~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 139 (534)
..|.||||+|+..|+.+++++|++.+. +.+.++..|.||||+|+..|+.+++++|+++++++.. .|..|+||||+|+
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGE--DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAV 81 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTC--CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCC--CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHH
Confidence 445566666666666666666666542 3444555666666666666666666666666555432 3556666666666
Q ss_pred hcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHH
Q 009452 140 SQGHVEVVKFLLEKGSTLATIARSNGKTALHSAA 173 (534)
Q Consensus 140 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~ 173 (534)
..|+.+++++|+++|+++ ...|.+|.||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhC
Confidence 666666666666666554 445556666666663
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=2.4e-20 Score=158.42 Aligned_cols=108 Identities=27% Similarity=0.281 Sum_probs=50.8
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhC
Q 009452 130 SNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKG 209 (534)
Q Consensus 130 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 209 (534)
.|.||||+|+..|+.+++++|++.+.++ ...+..|.||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVYE 83 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHc
Confidence 3444444444444444444444444443 33344444444444444444444444444444332 244455555555555
Q ss_pred CCHHHHHHHhhcCCccccccCCCCCcHHHHH
Q 009452 210 QSIELVDELVKVEPVIINMVDAKGNSALHIA 240 (534)
Q Consensus 210 ~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~A 240 (534)
|+.+++++|++ .+.+++.+|.+|.||||+|
T Consensus 84 ~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 84 GHVSCVKLLLS-KGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHC
T ss_pred CCHHHHHHHHH-cCCCCCCcCCCCCCHHHHh
Confidence 55555555554 2334445555555555554
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=1.3e-20 Score=177.43 Aligned_cols=173 Identities=20% Similarity=0.237 Sum_probs=115.8
Q ss_pred hhhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcC---------ChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 009452 15 KKQLTAKRDDTPLQSLVRTGSVELVLDMISSYG---------DMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYH 85 (534)
Q Consensus 15 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~---------~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~ 85 (534)
..-+-+..+.++.+.+++.|+...+..+.+.+- .......+...+..|.||||+||..|+.+++++|++.+
T Consensus 17 ~~al~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 96 (222)
T 3ehr_A 17 FRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR 96 (222)
T ss_dssp EEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTT
T ss_pred EEEeCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCC
Confidence 344667788888888888888655543322210 00001334556677788888888888888888888765
Q ss_pred CcccccccccCCCcHHHHHHHCCCHHHHHHHHhh-CccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcC
Q 009452 86 DTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEA-LPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSN 164 (534)
Q Consensus 86 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 164 (534)
.+.+.++..|.||||+|+..|+.+++++|++. +.++ +..|..|.||||+|+..|+.+++++|+++|+++ ...|.+
T Consensus 97 --~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 172 (222)
T 3ehr_A 97 --VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIE 172 (222)
T ss_dssp --CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTT
T ss_pred --CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCC
Confidence 34556677788888888888888888888877 4443 345777888888888888888888888887776 556777
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCC
Q 009452 165 GKTALHSAARNGHLEIVKALLSKEPGI 191 (534)
Q Consensus 165 g~tpLh~A~~~g~~~iv~~Ll~~~~~~ 191 (534)
|.||||+|+..|+.++++.|++.+...
T Consensus 173 g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 173 KKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp SCCHHHHCCSHHHHHHHC---------
T ss_pred CCCHHHHhcchhHHHHHHHHhccchhh
Confidence 888888888878888888777776654
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=2.3e-20 Score=175.75 Aligned_cols=123 Identities=28% Similarity=0.350 Sum_probs=66.8
Q ss_pred cCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhc-CCCchhhhhcCCCcHHHHHH
Q 009452 95 RNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEK-GSTLATIARSNGKTALHSAA 173 (534)
Q Consensus 95 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpLh~A~ 173 (534)
..|.||||+|+..|+.++++.|++.+.++. ..|..|+||||+|+..|+.+++++|++. |+++ +..|..|.||||+|+
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAA 148 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHH
Confidence 345556666666666666666665555433 2355556666666666666666666655 4444 444555556666665
Q ss_pred HcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 174 RNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 174 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
..|+.+++++|+++++++.. .|..|+||||+|+..++.++++.|++
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDL-RNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCC-CCTTSCCHHHHCCSHHHHHHHC----
T ss_pred HcCCHHHHHHHHHcCCCCcc-ccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 55555566655555555433 25555555555555555555555554
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=3.1e-19 Score=174.10 Aligned_cols=193 Identities=19% Similarity=0.195 Sum_probs=133.8
Q ss_pred cccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHH
Q 009452 93 KARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSA 172 (534)
Q Consensus 93 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 172 (534)
.|..+.+.++.+...|+..+.+++....+.........+....+ ....-..+++................++|+.|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a 137 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIA----RKDYITAKYMERRYARKKHADTAAKLHSLCEA 137 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHH----HHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHH----HHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence 45667778888888887766665544333211100011111111 11111222333222221112222345788889
Q ss_pred HHcCcHHHHHHHHhcCCCCccc-----CCCCCCcHHHHHHhC---CCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcC
Q 009452 173 ARNGHLEIVKALLSKEPGIVLR-----NDKKGQTALHMAVKG---QSIELVDELVKVEPVIINMVDAKGNSALHIATRKG 244 (534)
Q Consensus 173 ~~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~t~Lh~A~~~---~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~ 244 (534)
+..|+.+.++.+++.+++.... .|..|+||||+|+.. |+.+++++|++ .+.++|.+|.+|+||||+|+..|
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~-~ga~in~~d~~g~TpLh~A~~~g 216 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTALHYCCLTD 216 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH-HCSCTTCCCTTCCCHHHHHHHTT
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcC
Confidence 9999999998888888875433 377889999999988 88999999998 46778899999999999999988
Q ss_pred cH--HHHhhhcCCChHhhhccCCcHHHHHHhcCchhHHHHHHhcCCCC
Q 009452 245 RV--QKLLNINGVDKAVINKSRETALDTAEKTGHSEIGVILKEHGVPC 290 (534)
Q Consensus 245 ~~--~~ll~~~g~~~~~~n~~g~T~l~~A~~~~~~~i~~~L~~~g~~~ 290 (534)
+. .++|+..|++++.+|..|.||||+|+..|+.+++++|+++|+..
T Consensus 217 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 217 NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 86 68888899999999999999999999999999999999998864
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=5e-18 Score=165.55 Aligned_cols=120 Identities=23% Similarity=0.259 Sum_probs=57.7
Q ss_pred cHHHHHHHCCCHHHHHHHHhhCccccc-----cCCCCCCcHHHHHHhc---CCHHHHHHHHhcCCCchhhhhcCCCcHHH
Q 009452 99 DAFHIAAKQGCLEVLKILMEALPELLM-----TFDSSNTTALHTASSQ---GHVEVVKFLLEKGSTLATIARSNGKTALH 170 (534)
Q Consensus 99 t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~-----~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 170 (534)
++|+.|+..|+.+.++.+++.+++... ..|..|.||||+|+.. |+.+++++|+++|+++ +..|..|.||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHH
Confidence 345555555555555555554444321 1244455555555544 4455555555555444 334444555555
Q ss_pred HHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 171 SAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 171 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
+|+..|+.+++++|+++|+++... |..|.||||+|+..|+.+++++|++
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIA-NESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCc-cCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 555555555555555554443322 4445555555555555555555544
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=1.6e-18 Score=175.14 Aligned_cols=147 Identities=19% Similarity=0.227 Sum_probs=99.0
Q ss_pred cCCCcHHHHHHHC-CCHHHHHHHHhhCccccccCC--CCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHH
Q 009452 95 RNGYDAFHIAAKQ-GCLEVLKILMEALPELLMTFD--SSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHS 171 (534)
Q Consensus 95 ~~g~t~Lh~Aa~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 171 (534)
..+.|+||.|+.. |+.++++.|++.++++... | ..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~ 274 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWV-NGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHH 274 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHH
Confidence 3456788888888 8888888888887776543 4 67888888888888888888888888877 5677788888888
Q ss_pred HHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCC--ccccccCCCCCcHHHHHHHcC
Q 009452 172 AARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEP--VIINMVDAKGNSALHIATRKG 244 (534)
Q Consensus 172 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~--~~in~~d~~G~T~Lh~Aa~~~ 244 (534)
|+..|+.+++++|+++++++.. .|..|.||||+|+..++.+++++|+.... ......+..+.|+++++....
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~-~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGA-RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHcCcHHHHHHHHHCcCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 8888888888888888877654 37788888888888888888888876432 223345566777777765443
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.76 E-value=2.9e-18 Score=137.88 Aligned_cols=90 Identities=40% Similarity=0.605 Sum_probs=42.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhc
Q 009452 62 GETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQ 141 (534)
Q Consensus 62 g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 141 (534)
|.||||+|+..|+.+++++|++.+ .+.+.+|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARN 78 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHc
Confidence 445555555555555555555443 22333444455555555555555555555544444322 244444455554444
Q ss_pred CCHHHHHHHHhcC
Q 009452 142 GHVEVVKFLLEKG 154 (534)
Q Consensus 142 g~~~~v~~Ll~~~ 154 (534)
|+.+++++|+++|
T Consensus 79 ~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 79 GHLEVVKLLLEAG 91 (93)
T ss_dssp TCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcC
Confidence 4444444444444
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=2e-18 Score=174.48 Aligned_cols=146 Identities=16% Similarity=0.170 Sum_probs=113.9
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHHhCCcccccccc--cCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHH
Q 009452 60 QSGETALYVAAEY-GYVDMVREMIRYHDTSLAGIKA--RNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALH 136 (534)
Q Consensus 60 ~~g~T~Lh~Aa~~-g~~~iv~~Ll~~~~~~~~~~~~--~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 136 (534)
..+.|+||.|+.. |+.++++.|++.+.+. +..+ ..|.||||+|+..|+.+++++|+++++++. ..|..|+||||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv--n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-~~d~~G~TpLh 273 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV--NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN-QADSAGRGPLH 273 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC--CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHH
Confidence 4567899999999 9999999999988544 4455 889999999999999999999999998876 45999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCc--ccCCCCCCcHHHHHHhC
Q 009452 137 TASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIV--LRNDKKGQTALHMAVKG 209 (534)
Q Consensus 137 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~--~~~d~~g~t~Lh~A~~~ 209 (534)
+|+..|+.+++++|+++|+++ ...|.+|.||||+|+..|+.+++++|+..+.... ...+..+.|+++++...
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 999999999999999999998 6788999999999999999999999998764322 12345677887776543
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.76 E-value=4.5e-18 Score=136.74 Aligned_cols=93 Identities=48% Similarity=0.712 Sum_probs=80.3
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHc
Q 009452 96 NGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARN 175 (534)
Q Consensus 96 ~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 175 (534)
+|+||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+++|+++ ...|.+|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 478999999999999999999998887654 4888999999999999999999999999887 66788899999999999
Q ss_pred CcHHHHHHHHhcCCC
Q 009452 176 GHLEIVKALLSKEPG 190 (534)
Q Consensus 176 g~~~iv~~Ll~~~~~ 190 (534)
|+.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999988764
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=3.5e-18 Score=180.75 Aligned_cols=120 Identities=23% Similarity=0.251 Sum_probs=57.4
Q ss_pred cHHHHHHHCCCHHHHHHHHhhCcccccc-----CCCCCCcHHHHHHh---cCCHHHHHHHHhcCCCchhhhhcCCCcHHH
Q 009452 99 DAFHIAAKQGCLEVLKILMEALPELLMT-----FDSSNTTALHTASS---QGHVEVVKFLLEKGSTLATIARSNGKTALH 170 (534)
Q Consensus 99 t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~tpLh~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 170 (534)
+.||.|+..|+.+.++.|++.+++++.. .|..|.||||+||. .|+.+++++|+++|+++ +..|.+|.||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHH
Confidence 4455555555555555555444443211 13445555555533 44555555555555444 334444555555
Q ss_pred HHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhh
Q 009452 171 SAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVK 220 (534)
Q Consensus 171 ~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 220 (534)
+|+..|+.+++++|+++|+++... |..|+||||+|+..|+.+++++|++
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~~~~~~~~~Ll~ 261 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTV-NEAGETALDIARKKHHKECEELLEQ 261 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCC-CTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 555555555555555555444322 4455555555555555555555554
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=7.7e-18 Score=178.14 Aligned_cols=137 Identities=20% Similarity=0.246 Sum_probs=93.1
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCCchhh-----hhcCCCcHHHHHHH---cCcHHHHHHHHhcCCCCcccCCCCCCcHH
Q 009452 132 TTALHTASSQGHVEVVKFLLEKGSTLATI-----ARSNGKTALHSAAR---NGHLEIVKALLSKEPGIVLRNDKKGQTAL 203 (534)
Q Consensus 132 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~tpLh~A~~---~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L 203 (534)
.+.||.|+..|+.+.++.|++.|++++.. .+..|.||||+|+. .|+.+++++|+++|++++.. |..|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~-d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK-AADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCC-CSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCcc-CCCCCcHH
Confidence 36688888888888888888888776322 25678888888855 77888888888888776544 77788888
Q ss_pred HHHHhCCCHHHHHHHhhcCCccccccCCCCCcHHHHHHHcCcH--HHHhhhcCCChHhhhccCCcHHHH
Q 009452 204 HMAVKGQSIELVDELVKVEPVIINMVDAKGNSALHIATRKGRV--QKLLNINGVDKAVINKSRETALDT 270 (534)
Q Consensus 204 h~A~~~~~~~iv~~Ll~~~~~~in~~d~~G~T~Lh~Aa~~~~~--~~ll~~~g~~~~~~n~~g~T~l~~ 270 (534)
|+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..|+. ..+|+..|++++.......+++..
T Consensus 212 h~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~~~ 279 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVI 279 (497)
T ss_dssp HHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------------
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccccC
Confidence 88888888888888887 5667788888888888888887775 577778888877654444443333
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=8.6e-18 Score=140.68 Aligned_cols=106 Identities=37% Similarity=0.475 Sum_probs=58.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHH
Q 009452 128 DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAV 207 (534)
Q Consensus 128 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 207 (534)
|.+|+||||+|+..|+.+++++|+++++++ ...|..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+|+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHLAK 83 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHHHH
Confidence 555555555555555555555555555554 33455555666666655556666666555555432 2455566666666
Q ss_pred hCCCHHHHHHHhhcCCccccccCCCCCcH
Q 009452 208 KGQSIELVDELVKVEPVIINMVDAKGNSA 236 (534)
Q Consensus 208 ~~~~~~iv~~Ll~~~~~~in~~d~~G~T~ 236 (534)
..++.+++++|++ .+.++|.++..|.||
T Consensus 84 ~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDA-KGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHT-TSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHH-cCCCCCcCCcccccc
Confidence 6666666666555 344555555555554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=1.1e-17 Score=139.96 Aligned_cols=107 Identities=25% Similarity=0.379 Sum_probs=64.2
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcHHHH
Q 009452 58 MNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTALHT 137 (534)
Q Consensus 58 ~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 137 (534)
+|.+|.||||+|+..|+.+++++|++.+ .+.+..+..|.||||+|+..|+.+++++|+++++++.. .|..|.||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHH
Confidence 3556666666666666666666666654 23444556666666666666666666666666655432 35566666666
Q ss_pred HHhcCCHHHHHHHHhcCCCchhhhhcCCCcH
Q 009452 138 ASSQGHVEVVKFLLEKGSTLATIARSNGKTA 168 (534)
Q Consensus 138 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tp 168 (534)
|+..|+.+++++|+++|+++ +..+..|.+|
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~-n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADV-NARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSH-HHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCCCC-CcCCcccccc
Confidence 66666666666666666665 4445555554
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.60 E-value=1.8e-15 Score=125.50 Aligned_cols=89 Identities=35% Similarity=0.531 Sum_probs=49.0
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCCchhhhhcCCCcHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCcHHHHHH
Q 009452 128 DSSNTTALHTASSQGHVEVVKFLLEKGSTLATIARSNGKTALHSAARNGHLEIVKALLSKEPGIVLRNDKKGQTALHMAV 207 (534)
Q Consensus 128 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 207 (534)
|.+|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++++++.. .|..|+||||+|+
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKTAFDISI 98 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCcHHHHHH
Confidence 455555555555555555555555555554 33455555555555555555555555555555432 2455555555555
Q ss_pred hCCCHHHHHHH
Q 009452 208 KGQSIELVDEL 218 (534)
Q Consensus 208 ~~~~~~iv~~L 218 (534)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 55555555544
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.60 E-value=2.5e-15 Score=124.65 Aligned_cols=93 Identities=30% Similarity=0.380 Sum_probs=58.7
Q ss_pred HHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCcccccccccCCCcHHHHHHHCCCHHHHHHHHhhCccccccCCCCCCcH
Q 009452 55 LSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSLAGIKARNGYDAFHIAAKQGCLEVLKILMEALPELLMTFDSSNTTA 134 (534)
Q Consensus 55 l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp 134 (534)
....+.+|.||||+|+..|+.+++++|++.+ .+.+.+|..|.||||+|+..|+.+++++|+++++++.. .|..|.||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tp 93 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKTA 93 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCcH
Confidence 4455666777777777777777777777665 33445566677777777777777777777776665433 36666777
Q ss_pred HHHHHhcCCHHHHHHH
Q 009452 135 LHTASSQGHVEVVKFL 150 (534)
Q Consensus 135 Lh~A~~~g~~~~v~~L 150 (534)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 7777777776666655
No 115
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=58.81 E-value=9.6 Score=24.62 Aligned_cols=27 Identities=19% Similarity=0.239 Sum_probs=16.5
Q ss_pred chhhHHHHHHhhhHHHHHHHHHHHHHH
Q 009452 464 RGWAVAVTFIGTVIMVSTIGTMSYWVI 490 (534)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (534)
...+|..-++++++.+.+++...++++
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~ 34 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYV 34 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHh
Confidence 345677777777666666654444444
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=51.07 E-value=72 Score=30.99 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=22.5
Q ss_pred hhHHHHHHHhhhhhhhhhchhHHHHHHHHHHHHhh
Q 009452 331 GIAKRINKMHTEGLNNAINSTTVVAVLIATVAFAA 365 (534)
Q Consensus 331 ~~~~~l~k~~~e~l~~~~~~~~~va~Liat~~f~a 365 (534)
...+.........+++.-..++++|++++-.||=|
T Consensus 286 ~l~d~~~s~is~~~N~imk~LTiit~IflP~T~Ia 320 (363)
T 2iub_A 286 GLLDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIA 320 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334445555567888999998889888
No 117
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=48.50 E-value=10 Score=24.51 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=15.7
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHH
Q 009452 465 GWAVAVTFIGTVIMVSTIGTMSYWVI 490 (534)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (534)
..+|...++++++.+.+++...++++
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~ 35 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFM 35 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHh
Confidence 35567777777666666654444444
No 118
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=47.88 E-value=69 Score=30.78 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=14.9
Q ss_pred hhhhhhchhHHHHHHHHHHHHhh
Q 009452 343 GLNNAINSTTVVAVLIATVAFAA 365 (534)
Q Consensus 343 ~l~~~~~~~~~va~Liat~~f~a 365 (534)
.+++.-..+++++++++-.||-|
T Consensus 274 ~~N~~mk~LTiit~IflP~T~Ia 296 (339)
T 4ev6_A 274 KMNQIMKILTMVTTIFAVPMWIT 296 (339)
T ss_dssp HHHHHHHHHHHHHHHSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444456777777777777777
No 119
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=44.91 E-value=39 Score=24.86 Aligned_cols=27 Identities=7% Similarity=0.357 Sum_probs=18.2
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHHH
Q 009452 465 GWAVAVTFIGTVIMVSTIGTMSYWVIV 491 (534)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (534)
.++++..+++++++++++..++|.++.
T Consensus 10 ~~~Iv~gvi~gilliGllllliwk~~~ 36 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAALLIWKLLI 36 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777777777766665543
No 120
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=38.64 E-value=47 Score=32.08 Aligned_cols=227 Identities=8% Similarity=0.032 Sum_probs=109.2
Q ss_pred hhhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCccc-cccc
Q 009452 15 KKQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDTSL-AGIK 93 (534)
Q Consensus 15 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~~~-~~~~ 93 (534)
..-..|..|.-.|......++.+..+.+.+.-.+ +..+ -..|..|+..+.-....|..+....+++.-.+.. .-..
T Consensus 29 ~~la~dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~-~~~~--L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~ 105 (351)
T 3gvo_A 29 VEFSQDQHGSRFIQQKLERATPAERQIVFNEILQ-AAYQ--LMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLAL 105 (351)
T ss_dssp HHHHTSHHHHHHHHHHHHHCCHHHHHHHHHHHGG-GHHH--HHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHT
T ss_pred HHHhcCCcchHHHHHHHhhCCHHHHHHHHHHHHH-hHHH--HHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhh
Confidence 3445566666666666777766666665554332 1122 2356667777777777776666555555322211 1123
Q ss_pred ccCCCcHHHHHHHCCCHHHHHHHHhhC-cc-ccccCCCCCCcHHHHHHhcCCHHHHHHHHhcCC-Cc-hhhhhcCCCcHH
Q 009452 94 ARNGYDAFHIAAKQGCLEVLKILMEAL-PE-LLMTFDSSNTTALHTASSQGHVEVVKFLLEKGS-TL-ATIARSNGKTAL 169 (534)
Q Consensus 94 ~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~-~~-~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~-~~-~~~~~~~g~tpL 169 (534)
+..|.-.+..+......+-...+++.- +. .....|..|...+......+..+..+.+++.-. .. .-..+..|...+
T Consensus 106 ~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vv 185 (351)
T 3gvo_A 106 QMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVI 185 (351)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHH
T ss_pred CHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHH
Confidence 455555555555544444333333211 11 111225555555555555444333333333211 11 011223343344
Q ss_pred HHHHHcCcH----HHHHHHHhcCCCCcccCCCCCCcHHHHHHhCCCHHHHHHHhhcCCc-c-ccccCCCCCcHHHHHHHc
Q 009452 170 HSAARNGHL----EIVKALLSKEPGIVLRNDKKGQTALHMAVKGQSIELVDELVKVEPV-I-INMVDAKGNSALHIATRK 243 (534)
Q Consensus 170 h~A~~~g~~----~iv~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~-~-in~~d~~G~T~Lh~Aa~~ 243 (534)
..+...... .+++.|..... ....|..|.-.+....+.+..+..+.+++.-.. . --..++.|...+.-+...
T Consensus 186 q~~le~~~~~~~~~ii~~l~~~~~--~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~ 263 (351)
T 3gvo_A 186 QRILEHCTAEQTLPILEELHQHTE--QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 263 (351)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTTHH--HHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHhhhHH--hcCCCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence 333333322 33444432211 223467777777777777777666666653211 1 123566677777666665
Q ss_pred CcH
Q 009452 244 GRV 246 (534)
Q Consensus 244 ~~~ 246 (534)
+..
T Consensus 264 ~~~ 266 (351)
T 3gvo_A 264 ASR 266 (351)
T ss_dssp SCH
T ss_pred CCH
Confidence 543
No 121
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=38.20 E-value=46 Score=21.43 Aligned_cols=10 Identities=10% Similarity=0.165 Sum_probs=5.4
Q ss_pred hhhHHHHHHh
Q 009452 465 GWAVAVTFIG 474 (534)
Q Consensus 465 ~~~~~~~~~~ 474 (534)
-.++...++|
T Consensus 11 ~~~Ia~~vVG 20 (44)
T 2jwa_A 11 LTSIISAVVG 20 (44)
T ss_dssp HHHHHHHHHH
T ss_pred ccchHHHHHH
Confidence 3445555666
No 122
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=33.40 E-value=64 Score=31.13 Aligned_cols=228 Identities=16% Similarity=0.186 Sum_probs=130.1
Q ss_pred HhhhcCCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHHHHHhcCCCCCcHHHHHHHcCCHHHHHHHHHhCCc-ccccc
Q 009452 14 MKKQLTAKRDDTPLQSLVRTGSVELVLDMISSYGDMELREMLSKMNQSGETALYVAAEYGYVDMVREMIRYHDT-SLAGI 92 (534)
Q Consensus 14 ~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~T~Lh~Aa~~g~~~iv~~Ll~~~~~-~~~~~ 92 (534)
+..-++|..|+..+......++.+....+++.-.+. +.+ -..+..|.-.+..+......+-...+++.-.+ ...-.
T Consensus 64 ~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~-~~~--l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~ 140 (351)
T 3gvo_A 64 AYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGH-VLP--LALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCV 140 (351)
T ss_dssp HHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTC-HHH--HHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHH
T ss_pred HHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhh-HHH--HhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHH
Confidence 445678888888888888888888777777654321 111 23466677777777777666555555543211 12223
Q ss_pred cccCCCcHHHHHHHCCCHHHHHHHHhhCcc--ccccCCCCCCcHHHHHHhcCCHH----HHHHHHhcCCCchhhhhcCCC
Q 009452 93 KARNGYDAFHIAAKQGCLEVLKILMEALPE--LLMTFDSSNTTALHTASSQGHVE----VVKFLLEKGSTLATIARSNGK 166 (534)
Q Consensus 93 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~--~~~~~d~~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~g~ 166 (534)
.|.+|+..+......+..+..+.+++.-.. ..-..+..|...+..+......+ +++.|... ...-..|..|.
T Consensus 141 ~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~--~~~L~~d~~Gn 218 (351)
T 3gvo_A 141 KDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQH--TEQLVQDQYGN 218 (351)
T ss_dssp HSTTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTT--HHHHHTSTTHH
T ss_pred HhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhh--HHhcCCCchHH
Confidence 566676666666655554444444433211 11123556666666555544443 33333322 12234577787
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCC--CcccCCCCCCcHHHHHHhCCCHH----HHHHHhhcC--C---ccccccCCCCCc
Q 009452 167 TALHSAARNGHLEIVKALLSKEPG--IVLRNDKKGQTALHMAVKGQSIE----LVDELVKVE--P---VIINMVDAKGNS 235 (534)
Q Consensus 167 tpLh~A~~~g~~~iv~~Ll~~~~~--~~~~~d~~g~t~Lh~A~~~~~~~----iv~~Ll~~~--~---~~in~~d~~G~T 235 (534)
..+......+..+..+.+++.-.. .....++.|...+.-+...+..+ +++.++... + ...-..|..||-
T Consensus 219 ~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~~d~ygny 298 (351)
T 3gvo_A 219 YVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANY 298 (351)
T ss_dssp HHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHHHSTTHHH
T ss_pred HHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHccCCcchHH
Confidence 788888887777666666654322 12234677777777777776654 444444311 0 011246889998
Q ss_pred HHHHHHHcCcH
Q 009452 236 ALHIATRKGRV 246 (534)
Q Consensus 236 ~Lh~Aa~~~~~ 246 (534)
.+..+...+..
T Consensus 299 Viq~~L~~~~~ 309 (351)
T 3gvo_A 299 VVQKMIDMAEP 309 (351)
T ss_dssp HHHHHHHHCCH
T ss_pred HHHHHHHhCCH
Confidence 88888766654
No 123
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=32.44 E-value=1e+02 Score=30.39 Aligned_cols=56 Identities=21% Similarity=0.236 Sum_probs=34.0
Q ss_pred HHHHHcCCHHHHHHHHHhcCChhH------HHHHHhcCC--CCCcHHHHHHHcCCHHHHHHHHH
Q 009452 28 QSLVRTGSVELVLDMISSYGDMEL------REMLSKMNQ--SGETALYVAAEYGYVDMVREMIR 83 (534)
Q Consensus 28 h~A~~~g~~~~v~~Ll~~~~~~~~------~~~l~~~n~--~g~T~Lh~Aa~~g~~~iv~~Ll~ 83 (534)
...+..|+...|+..+..|+++.. ..+++..+. .|.|.+|+|++..+-+++..|+.
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 345678999999999999886531 122332221 25555666666665555555554
No 124
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=26.33 E-value=83 Score=21.21 Aligned_cols=21 Identities=5% Similarity=0.221 Sum_probs=13.4
Q ss_pred CchhhHHHHHHhhhHHHHHHH
Q 009452 463 GRGWAVAVTFIGTVIMVSTIG 483 (534)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~ 483 (534)
..|+.|.+.++++..++.++.
T Consensus 7 vp~WiIi~svl~GLLLL~Lii 27 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLI 27 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHH
Confidence 346777777777766655543
No 125
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=25.96 E-value=1.3e+02 Score=19.11 Aligned_cols=26 Identities=8% Similarity=0.331 Sum_probs=16.2
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHH
Q 009452 465 GWAVAVTFIGTVIMVSTIGTMSYWVI 490 (534)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (534)
.+++...++++++++.++..+.|.++
T Consensus 9 ~~~Iv~gvi~~ivliGl~lLliwk~~ 34 (43)
T 2k9j_B 9 ILVVLLSVMGAILLIGLAALLIWKLL 34 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeehHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566777777776666655554
No 126
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=24.21 E-value=68 Score=21.64 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=13.3
Q ss_pred CchhhHHHHHHhhhHHHHHHH
Q 009452 463 GRGWAVAVTFIGTVIMVSTIG 483 (534)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~ 483 (534)
..||.|.+.++++..++.++.
T Consensus 10 vp~wiIi~svl~GLllL~li~ 30 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILV 30 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHH
Confidence 347777777777766655543
No 127
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=22.69 E-value=4.4e+02 Score=24.92 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 009452 436 INKLMWLACIMISVAFLALSYIV 458 (534)
Q Consensus 436 ~~~~~~~~~~~~~~af~~~~~~~ 458 (534)
.+.+-.++.+++..+|++|+|=+
T Consensus 279 mk~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 279 MKILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhhccC
Confidence 44566788889999999999955
No 128
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=20.98 E-value=4.3e+02 Score=26.43 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 009452 477 IMVSTIGTMSYWVIVNRIEASK 498 (534)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~ 498 (534)
++-.++..++|..+...+++.+
T Consensus 229 ~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 229 TLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3334455566666666555443
Done!