Query         009453
Match_columns 534
No_of_seqs    334 out of 1187
Neff          5.1 
Searched_HMMs 29240
Date          Mon Mar 25 05:31:58 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009453.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009453hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3q0b_X Histone-lysine N-methyl 100.0 9.3E-60 3.2E-64  443.4  16.9  157  197-356     1-162 (167)
  2 3fde_A E3 ubiquitin-protein li 100.0 1.4E-58 4.9E-63  447.1  14.4  182  195-386     3-210 (212)
  3 2pb7_A E3 ubiquitin-protein li 100.0 6.8E-58 2.3E-62  448.3  18.5  188  189-386     4-218 (239)
  4 3oln_A E3 ubiquitin-protein li 100.0 1.5E-57 5.2E-62  443.5  17.6  164  191-364    22-208 (231)
  5 3hna_A Histone-lysine N-methyl 100.0 1.2E-38   4E-43  323.1  15.8  173  356-531     4-191 (287)
  6 1mvh_A Cryptic LOCI regulator  100.0 3.6E-34 1.2E-38  291.6  12.1  156  376-531    17-181 (299)
  7 1ml9_A Histone H3 methyltransf 100.0 2.1E-33 7.3E-38  285.9  11.2  147  382-530     5-176 (302)
  8 3bo5_A Histone-lysine N-methyl 100.0 2.9E-31 9.9E-36  269.2  16.0  146  377-530    14-169 (290)
  9 2r3a_A Histone-lysine N-methyl 100.0 2.9E-31   1E-35  270.4  13.3  142  385-530    40-184 (300)
 10 3h6l_A Histone-lysine N-methyl  99.8   6E-22 2.1E-26  199.9   6.9  112  397-530    33-160 (278)
 11 3ooi_A Histone-lysine N-methyl  99.8   8E-21 2.7E-25  186.8   8.5  113  399-530    15-135 (232)
 12 3ope_A Probable histone-lysine  99.8 5.6E-20 1.9E-24  179.5  10.7  113  403-530     2-117 (222)
 13 2w5y_A Histone-lysine N-methyl  99.1 7.2E-12 2.4E-16  120.1   0.8   60  471-530    36-95  (192)
 14 3f9x_A Histone-lysine N-methyl  99.1 2.7E-11 9.3E-16  112.0   2.9   55  476-530    19-73  (166)
 15 2f69_A Histone-lysine N-methyl  98.9   2E-09 6.9E-14  107.7   7.1   70  460-530    82-154 (261)
 16 1n3j_A A612L, histone H3 lysin  98.6 1.2E-08 4.1E-13   89.8   2.9   46  486-531     3-48  (119)
 17 2qpw_A PR domain zinc finger p  98.4 1.4E-07 4.8E-12   87.0   2.9   52  475-527    18-71  (149)
 18 1h3i_A Histone H3 lysine 4 spe  98.3 5.3E-07 1.8E-11   90.6   6.5   45  486-530   162-208 (293)
 19 3s8p_A Histone-lysine N-methyl  97.9 3.7E-06 1.3E-10   84.7   2.3   36  492-527   141-176 (273)
 20 3ep0_A PR domain zinc finger p  97.5 7.4E-05 2.5E-09   70.4   5.3   46  483-528    23-70  (170)
 21 3rq4_A Histone-lysine N-methyl  97.2  0.0001 3.5E-09   73.2   2.6   33  494-526   115-147 (247)
 22 3dal_A PR domain zinc finger p  96.9 0.00032 1.1E-08   67.5   2.3   46  484-529    55-102 (196)
 23 3db5_A PR domain zinc finger p  96.9 0.00049 1.7E-08   63.3   3.3   46  484-529    20-66  (151)
 24 3ray_A PR domain-containing pr  94.7   0.013 4.5E-07   57.8   2.7   43  485-527    70-113 (237)
 25 3ihx_A PR domain zinc finger p  93.9   0.019 6.6E-07   52.8   1.7   31  497-527    30-60  (152)
 26 1rju_V Metallothionein; Cu(I)-  31.2      20 0.00068   24.7   1.4   16  424-440    19-34  (36)
 27 1aqs_A Cu-MT, Cu-metallothione  28.8      30   0.001   25.6   2.2   22  422-444    21-42  (53)
 28 3smt_A Histone-lysine N-methyl  21.3      57  0.0019   34.9   3.5   29  488-516    94-122 (497)

No 1  
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X*
Probab=100.00  E-value=9.3e-60  Score=443.45  Aligned_cols=157  Identities=53%  Similarity=0.894  Sum_probs=140.4

Q ss_pred             CccccCCCCcCCceechHhHHHHhcccCcccCCcceeeccCCCCCCCeEEEEEecCCCCCCCCCCCeEEEEccCCCCC--
Q 009453          197 KRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSGQGGNAN--  274 (534)
Q Consensus       197 k~~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GId~~~~~~~~~~~~~A~SIV~SGgY~dd~D~gd~liYtG~GG~~~--  274 (534)
                      .+|||||||+|||||++|+||+++|||+++|+||||++.   ++++++|+|||+||+|+||+|+||+|+|||+||++.  
T Consensus         1 ~~~G~vpGv~vGd~f~~R~el~~~G~H~~~~aGI~~~~~---~~~~~gA~SIV~SggY~Dd~D~gd~l~YTG~GG~~~~~   77 (167)
T 3q0b_X            1 QIIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKD---DGGELVATSIVSSGGYNDVLDNSDVLIYTGQGGNVGKK   77 (167)
T ss_dssp             CCCSCCTTCCTTCEESCHHHHHHTTSCCCSSCSEEEEEC---SSSCEEEEEEEESSSTTCEECSSSEEEEECSCTTCC--
T ss_pred             CcccCCCCCcCccEecchHHHhHhCcCCCccCCeecccc---cCCCcceEEEEeCCCcccccCCCCEEEEECCCCCcccc
Confidence            379999999999999999999999999999999999984   235789999999999999999999999999999965  


Q ss_pred             CCCCcccCcccchhhHHHHHHHHhCCccEEEecccc---ccCCCCceeeeeCeeeeeeeEEecCCCcceeeeEeeeecCC
Q 009453          275 RKGEQAADQKLERGNLALERSLRRASEVRVIRGMKD---AINQSSKVYVYDGLYTVQESWTEKGKSGCNIFKYKLVRIPG  351 (534)
Q Consensus       275 ~~~~~~~DQkl~~gNlAL~~S~~~~~PVRVIRg~~~---~~~~~~k~YrYDGLY~V~~~w~e~g~~G~~v~kfkL~Rlpg  351 (534)
                      .+++|+.||+|++||+||++|+++++|||||||++.   ..++|.++|||||||+|++||.|+|++|++||||+|+|+||
T Consensus        78 ~~~~q~~DQ~l~~gN~AL~~S~~~~~pVRViRg~k~~~~~~~~p~~gyrYDGLY~V~~~w~e~g~~G~~v~kf~L~R~~g  157 (167)
T 3q0b_X           78 KNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVVAKNYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPG  157 (167)
T ss_dssp             ---CCCCCCCSSHHHHHHHHHHHHCCCEEEEEECC----------CCEEEEEEEEEEEEEEEECTTSCEEEEEEEEECTT
T ss_pred             ccccccccCccchhHHHHHHHHHcCCcEEEEEeecccccCCCCCCccEEECeEEEEeeeEEeeCCCCcEEEEEEEEEcCC
Confidence            377899999999999999999999999999999998   45678999999999999999999999999999999999999


Q ss_pred             CCCcc
Q 009453          352 QPGAF  356 (534)
Q Consensus       352 Qp~~~  356 (534)
                      ||++.
T Consensus       158 Qp~l~  162 (167)
T 3q0b_X          158 QPELP  162 (167)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            99964


No 2  
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} SCOP: b.122.1.12 PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A*
Probab=100.00  E-value=1.4e-58  Score=447.10  Aligned_cols=182  Identities=31%  Similarity=0.542  Sum_probs=162.0

Q ss_pred             CCCccccCCCCcCCceechHhHHHHhcccCcccCCcceeeccCCCCCCCeEEEEEecCCCCCCCCCCCeEEEEccCCCCC
Q 009453          195 MRKRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSGQGGNAN  274 (534)
Q Consensus       195 ~~k~~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GId~~~~~~~~~~~~~A~SIV~SGgY~dd~D~gd~liYtG~GG~~~  274 (534)
                      +.++||+||||+|||||++|+||+++|||+++|+|||+++.       .+|+|||+||||+||+|+||+|+|||+||++.
T Consensus         3 p~~~~G~iPGv~VGd~f~~R~el~~~G~H~~~qaGI~g~~~-------~GA~SIVlSGGY~DD~D~Gd~l~YTGsGG~d~   75 (212)
T 3fde_A            3 PANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSN-------DGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDL   75 (212)
T ss_dssp             CTTCCSCCTTCCTTCEESSHHHHHHHTSSCCSSCSEEEETT-------TEEEEEEECSCSTTCEECSSEEEEECSCCBCC
T ss_pred             CcccccCCCCCcCccEecCHHHHhHhccCCCCcCCcccCCC-------cceEEEEeCCCcccCCCCCCEEEEeccCCccC
Confidence            56899999999999999999999999999999999999652       68999999999999999999999999999853


Q ss_pred             ----CCCCcccCcccchhhHHHHHHH--------------HhCCccEEEeccccc---cCCCCceeeeeCeeeeeeeEEe
Q 009453          275 ----RKGEQAADQKLERGNLALERSL--------------RRASEVRVIRGMKDA---INQSSKVYVYDGLYTVQESWTE  333 (534)
Q Consensus       275 ----~~~~~~~DQkl~~gNlAL~~S~--------------~~~~PVRVIRg~~~~---~~~~~k~YrYDGLY~V~~~w~e  333 (534)
                          ++.+|++||+|++||+||++||              ++++|||||||++..   .++|.++|||||||+|++||.|
T Consensus        76 ~gnkr~~~q~~DQ~l~~gNlAL~~s~~~~~~~~~~~~~s~~~g~PVRVIRg~k~~k~s~yaP~~gyrYDGLY~V~~~W~e  155 (212)
T 3fde_A           76 SGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPE  155 (212)
T ss_dssp             TTTCSCCCBCSCCCSCHHHHHHHHTSSSCCCTTCEECSSGGGSCCEEEEEESCSSTTCSSSCSSSEEEEEEEEEEEEEEE
T ss_pred             cCccccCcccccccccccchHHHhhccccccccchhhhhhhcCCcEEEEcccCcCCCCccCCCCCeEeCeEEEEEEEEEc
Confidence                3456999999999999999986              579999999999863   4678899999999999999999


Q ss_pred             cCCCcceeeeEeeeecCCCCCcchhhhhhhhhcc-----CCCCcceeecCCCCCCccc
Q 009453          334 KGKSGCNIFKYKLVRIPGQPGAFALWKLIQRWKD-----GMSGRVGLILPDLSSGAEA  386 (534)
Q Consensus       334 ~g~~G~~v~kfkL~RlpgQp~~~svwk~~q~~~~-----~~~~r~~li~~DIS~G~E~  386 (534)
                      +|++|+.||||+|+|++|||+   .|+..++++.     ...-..|++..|+++++|.
T Consensus       156 ~g~~G~~V~kf~L~R~~gqp~---~w~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  210 (212)
T 3fde_A          156 RGKSGFLVWRYLLRRDDTEPE---PWTREGKDRTRQLGLTMQYPEGYLEALANKEKSR  210 (212)
T ss_dssp             ECTTSSEEEEEEEEECCSSCC---TTSHHHHHHHHHHTCCCBCCTTHHHHHHHHTSCC
T ss_pred             cCCCCcEEEEEEEEECCCCCC---CcchhhHhhhhccccceeCCcchhhHhhhcchhc
Confidence            999999999999999999996   6888776532     2334568999999888874


No 3  
>2pb7_A E3 ubiquitin-protein ligase UHRF1; beta barrel, NEW fold; 1.90A {Homo sapiens} SCOP: b.122.1.12
Probab=100.00  E-value=6.8e-58  Score=448.29  Aligned_cols=188  Identities=32%  Similarity=0.534  Sum_probs=156.0

Q ss_pred             cCcccCCCCccccCCCCcCCceechHhHHHHhcccCcccCCcceeeccCCCCCCCeEEEEEecCCCCCCCCCCCeEEEEc
Q 009453          189 KGVRTNMRKRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSG  268 (534)
Q Consensus       189 ~~~~~n~~k~~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GId~~~~~~~~~~~~~A~SIV~SGgY~dd~D~gd~liYtG  268 (534)
                      +-..+++.++|||||||+|||||+||+||+++|||+++|+|||++.       ..+|+|||+||||+||+|+||+|+|||
T Consensus         4 ~~~~~~~~~~~G~iPGV~VGd~f~~R~el~~~GlH~~~~aGI~g~~-------~~GA~SIVlSGgYeDD~D~GD~liYTG   76 (239)
T 2pb7_A            4 KECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRS-------NDGAYSLVLAGGYEDDVDHGNFFTYTG   76 (239)
T ss_dssp             -CCCSSCTTCCSCCTTCCTTCEESSHHHHHHHTSSCCSSCSEEEET-------TTEEEEEEESSCSTTCCBCSSEEEEEC
T ss_pred             eEEEecCCCcccCCCCCcCCCEECCHHHHHHhCCccccccCcccCC-------CCCEEEEEECCCccccccCCcEEEEEc
Confidence            3457899999999999999999999999999999999999999864       368999999999999999999999999


Q ss_pred             cCCCCC----CCCCcccCcccchhhHHHHHH---------------HHhCCccEEEeccccc---cCCCCceeeeeCeee
Q 009453          269 QGGNAN----RKGEQAADQKLERGNLALERS---------------LRRASEVRVIRGMKDA---INQSSKVYVYDGLYT  326 (534)
Q Consensus       269 ~GG~~~----~~~~~~~DQkl~~gNlAL~~S---------------~~~~~PVRVIRg~~~~---~~~~~k~YrYDGLY~  326 (534)
                      +||++.    ++..|.+||+|++||+||++|               |++++|||||||+++.   .++|.++|||||||+
T Consensus        77 sGG~d~~gnkr~~~q~~DQ~L~~gNlAL~~sc~~~~~~k~~~~~~s~~~g~PVRVIRg~k~~k~s~yaP~~GyrYDGLY~  156 (239)
T 2pb7_A           77 SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYK  156 (239)
T ss_dssp             CCC----------CCCSCCCSCHHHHHHHHTSSSCCCTTTCEECTTGGGSCCEEEEEEGGGGGTCTTSCSSSEEEEEEEE
T ss_pred             cCCccCcccccccccccccccccccHHHHhhhhcccccccchhhhhhccCCceEEEcccccCcCCcccCCceEEeCCeEE
Confidence            999853    235699999999999999997               4689999999999873   467889999999999


Q ss_pred             eeeeEEecCCCcceeeeEeeeecCCCCCcchhhhhhhh-----hccCCCCcceeecCCCCCCccc
Q 009453          327 VQESWTEKGKSGCNIFKYKLVRIPGQPGAFALWKLIQR-----WKDGMSGRVGLILPDLSSGAEA  386 (534)
Q Consensus       327 V~~~w~e~g~~G~~v~kfkL~RlpgQp~~~svwk~~q~-----~~~~~~~r~~li~~DIS~G~E~  386 (534)
                      |++||.++|++|+.||||+|+|+|+||+   .|++...     +.....-..+++..||+.++|.
T Consensus       157 V~~~w~e~gk~G~~V~kf~L~R~~gQP~---~w~~~~~~r~~~l~~~~~~p~~~~~~~~~~~~~~  218 (239)
T 2pb7_A          157 VVKYWPEKGKSGFLVWRYLLRRDDDEPG---PWTKEGKDRIKKLGLTMQYPEGYLEALANREREK  218 (239)
T ss_dssp             EEEEEEEECTTSSEEEEEEEEECCSSCC---TTSHHHHHHHHHTTCCCBCCTTTTTCC-------
T ss_pred             EEEEEEeecCCCcEEEEEEEEECCCCCC---CccccccccccccCcceecCcccchhhhhhhhhh
Confidence            9999999999999999999999999996   5665433     3333344568999999998875


No 4  
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} SCOP: b.122.1.12
Probab=100.00  E-value=1.5e-57  Score=443.51  Aligned_cols=164  Identities=30%  Similarity=0.514  Sum_probs=145.0

Q ss_pred             cccCCCCccccCCCCcCCceechHhHHHHhcccCcccCCcceeeccCCCCCCCeEEEEEecCCCCCCCCCCCeEEEEccC
Q 009453          191 VRTNMRKRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSGQG  270 (534)
Q Consensus       191 ~~~n~~k~~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GId~~~~~~~~~~~~~A~SIV~SGgY~dd~D~gd~liYtG~G  270 (534)
                      .++++.++||+||||+|||||+||+||+++|||+++|+|||+++.       .+|+|||+||||+||+|+||+|+|||+|
T Consensus        22 ~~~~p~~~~G~IPGV~VGd~f~~R~el~~~GlH~p~~aGI~g~~~-------~GA~SIVlSGgYeDD~D~Gd~liYTGsG   94 (231)
T 3oln_A           22 CTIVPSNHYGPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSN-------DGAYSLVLAGGFADEVDRGDEFTYTGSG   94 (231)
T ss_dssp             --CCCTTCCSCCTTCCTTCEESSHHHHHHTTSSCCSSCSEEEETT-------TEEEEEEESSCSSTTCBCSSEEEEECCC
T ss_pred             EeecCCccCcCCCCCcCcCEEccHHHHhhhCCCCcccCCcccCCC-------CCeEEEEecCCccccCCCCCEEEEEcCC
Confidence            468999999999999999999999999999999999999999753       6899999999999999999999999999


Q ss_pred             CCCC----CCCCcccCcccchhhHHHHHHH---------------HhCCccEEEeccccc---cCCCCceeeeeCeeeee
Q 009453          271 GNAN----RKGEQAADQKLERGNLALERSL---------------RRASEVRVIRGMKDA---INQSSKVYVYDGLYTVQ  328 (534)
Q Consensus       271 G~~~----~~~~~~~DQkl~~gNlAL~~S~---------------~~~~PVRVIRg~~~~---~~~~~k~YrYDGLY~V~  328 (534)
                      |++.    ++.+|..||+|++|||||++||               +.++|||||||++..   .++|.++|||||||+|+
T Consensus        95 G~d~~gnkrt~~q~~DQkl~~gNlAL~~Sc~~~~~~k~~~~~~~~~~g~PVRVIRg~k~~k~s~yaP~~gyrYDGLY~V~  174 (231)
T 3oln_A           95 GKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVV  174 (231)
T ss_dssp             C-----------CCSCCCSCHHHHHHHHHSSSCCCTTTCEECSSGGGSCCEEEEEEGGGTTTCTTSCSSSEEEEEEEEEE
T ss_pred             CccCcCcccccccccccccccchHHHHhhhhccccccccchhhhhccCCceEEEeccccCcCCCccCCCCeEeCeEEEEE
Confidence            9853    3456999999999999999994               567999999999963   45788999999999999


Q ss_pred             eeEEecCCC-cceeeeEeeeecCCCCCcchhhhhhhh
Q 009453          329 ESWTEKGKS-GCNIFKYKLVRIPGQPGAFALWKLIQR  364 (534)
Q Consensus       329 ~~w~e~g~~-G~~v~kfkL~RlpgQp~~~svwk~~q~  364 (534)
                      +||.|+|++ |+.||||+|+|+||||+   .|+..++
T Consensus       175 ~~W~e~g~s~G~~V~Kf~L~R~~gQP~---~w~~~~~  208 (231)
T 3oln_A          175 KYWPEISSSHGFLVWRYLLRRDDVEPA---PWTSEGI  208 (231)
T ss_dssp             EEEEEECTTTCCEEEEEEEEECCSSCC---TTSHHHH
T ss_pred             EEEeccCCcCCeEEEEEEEEECCCCCC---Ccchhhh
Confidence            999999999 99999999999999996   5777664


No 5  
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00  E-value=1.2e-38  Score=323.05  Aligned_cols=173  Identities=36%  Similarity=0.730  Sum_probs=152.3

Q ss_pred             chhhhhhhhhc---c----CCCCcceeecCCCCCCccccCcceeecCCCCCCCCceEEeeeeeecCCCCCC---CCCCCC
Q 009453          356 FALWKLIQRWK---D----GMSGRVGLILPDLSSGAEAIPIALINDVDDEKGPAYFTYLTTVKYSKSFRLT---QPSFGC  425 (534)
Q Consensus       356 ~svwk~~q~~~---~----~~~~r~~li~~DIS~G~E~~PV~vvNdVD~e~~P~~F~Yi~~~~~~~~~~~~---~~~~gC  425 (534)
                      ..+|++++..+   +    .++.++++|+.|||+|+|++||+++|+||++..|..|+||+++++..++.+.   .+..||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dis~G~E~~pi~~~N~vD~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC   83 (287)
T 3hna_A            4 SQVWSALQMSKALQDSAPDRPSPVERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYC   83 (287)
T ss_dssp             HHHHHHHHHHHHC-------CCCCCEEEESCTTTTCSSSCCCEEESSSSCCCCCSSEECSSCEESSCCCCCCBGGGCCCC
T ss_pred             chhHHhhhhhHHhHhhcccCccccCCEEhHhhCCCCCCCCEEEEeCCCCCCCCCCcEEccccccCCCccccccCCCCCCC
Confidence            35788887532   2    3567899999999999999999999999999889999999999887776542   346799


Q ss_pred             cCCCCCCCCCCCcccccccCCCCcccCCCcccc-----CCCceeecCCCCCCCCCCCCceeccCceeceEEEEccCCCcc
Q 009453          426 NCYSACGPGNPNCSCVQKNGGDFPYTANGVLVS-----RKPLIYECGPSCPCNRDCKNRVSQTGLKVRLDVFKTKDRGWG  500 (534)
Q Consensus       426 ~C~~~C~~~~~~C~C~~~ngg~~~Y~~~G~L~~-----~~~~i~EC~~~C~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWG  500 (534)
                      +|.++|.+  .+|+|.+.+. .++|+++|+|..     .++++|||++.|.|+.+|.||++|+|++.+|+||+|..+|||
T Consensus        84 ~C~~~C~~--~~C~C~~~~~-~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~G  160 (287)
T 3hna_A           84 VCIDDCSS--SNCMCGQLSM-RCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWG  160 (287)
T ss_dssp             CCSSSSCS--TTCHHHHHTS-SCCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCCSCEEEEECSSSSEE
T ss_pred             cCcCCCCC--CCCcCcccCc-ccccCCCCcccccccccCCceEEecCCCCCCCCCCCCcccCcCCcccEEEEEcCCCceE
Confidence            99999987  5899998774 579999999874     467899999999999999999999999999999999999999


Q ss_pred             eeecCcCCCCCeEEEeeeEEeCHHHHhhhcC
Q 009453          501 LRSLDPIRAGTFICEYAGEVVDKFKARQDGE  531 (534)
Q Consensus       501 VRa~~~I~~G~FIcEY~GEvIt~~E~~~~~e  531 (534)
                      |||+++|++|+||+||+||||+.+|++.++.
T Consensus       161 v~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~  191 (287)
T 3hna_A          161 VRSLQDIPPGTFVCEYVGELISDSEADVREE  191 (287)
T ss_dssp             EEESSCBCTTCEEEEECEEEEEHHHHHTCSC
T ss_pred             EEeCcccCCCCEEEEeeeEEccHHHHhhhcc
Confidence            9999999999999999999999999988763


No 6  
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00  E-value=3.6e-34  Score=291.61  Aligned_cols=156  Identities=35%  Similarity=0.700  Sum_probs=138.2

Q ss_pred             ecCCCCCCccccCcceeecCCCCCCCC-ceEEeeeeeecCCCCCCC--CCCCCcCCC--CCCCC-CCCccccccc--CCC
Q 009453          376 ILPDLSSGAEAIPIALINDVDDEKGPA-YFTYLTTVKYSKSFRLTQ--PSFGCNCYS--ACGPG-NPNCSCVQKN--GGD  447 (534)
Q Consensus       376 i~~DIS~G~E~~PV~vvNdVD~e~~P~-~F~Yi~~~~~~~~~~~~~--~~~gC~C~~--~C~~~-~~~C~C~~~n--gg~  447 (534)
                      +..|+++|.|++||+++|+||++.+|. .|+||+++++...+...+  +..+|+|.+  +|.+. ..+|+|.+++  ++.
T Consensus        17 ~~~~~~~g~e~~pi~~~N~vd~~~~p~~~F~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~   96 (299)
T 1mvh_A           17 LFRKKLREIEGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGVIPPDPNFQSGCNCSSLGGCDLNNPSRCECLDDLDEPTH   96 (299)
T ss_dssp             HHHHHHHTSSSSCEEEECSSCCCCCSCCCSEECSSCEECTTCCCCCGGGCCCCCCCCSSSSCTTCTTTCSSSTTCCSSCC
T ss_pred             HHHHHHcCcCCCCEEEEeCCCCCCCCCCCcEEccceecCCCcCcCCCcCCCCCcCcCCCCcCCCCCCCCccccccccccc
Confidence            456778999999999999999998777 899999999987765433  348999996  89872 2589999875  678


Q ss_pred             CcccCCCccc-cCCCceeecCCCCCCCCCCCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHH
Q 009453          448 FPYTANGVLV-SRKPLIYECGPSCPCNRDCKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKA  526 (534)
Q Consensus       448 ~~Y~~~G~L~-~~~~~i~EC~~~C~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~  526 (534)
                      ++|+.+|+|. ....++|||++.|+|+.+|.||++|+|.+.+|+||+|..+||||||+++|++|+||+||+||||+.+|+
T Consensus        97 ~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea  176 (299)
T 1mvh_A           97 FAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEA  176 (299)
T ss_dssp             CSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHH
T ss_pred             cccCCCCceeecCCCCeEeCCCCCCCCCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHH
Confidence            9999999984 567889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcC
Q 009453          527 RQDGE  531 (534)
Q Consensus       527 ~~~~e  531 (534)
                      ++|+.
T Consensus       177 ~~R~~  181 (299)
T 1mvh_A          177 AKRDK  181 (299)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            88763


No 7  
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00  E-value=2.1e-33  Score=285.91  Aligned_cols=147  Identities=32%  Similarity=0.707  Sum_probs=127.6

Q ss_pred             CCccccCcceeecCCCCCCCCceEEeeeeeecCCCCCC--CCCCCCcCCC--CCCCCCCCcccccccC------------
Q 009453          382 SGAEAIPIALINDVDDEKGPAYFTYLTTVKYSKSFRLT--QPSFGCNCYS--ACGPGNPNCSCVQKNG------------  445 (534)
Q Consensus       382 ~G~E~~PV~vvNdVD~e~~P~~F~Yi~~~~~~~~~~~~--~~~~gC~C~~--~C~~~~~~C~C~~~ng------------  445 (534)
                      .++|.+||+++|+||++..|+.|+||+++++..++...  .+..||+|.+  .|.+  .+|+|.++++            
T Consensus         5 ~~~e~~pi~~~N~vd~~~~P~~F~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~--~~C~C~~~~~~~~~~~~~~~~~   82 (302)
T 1ml9_A            5 ATHAQLPISIVNREDDAFLNPNFRFIDHSIIGKNVPVADQSFRVGCSCASDEECMY--STCQCLDEMAPDSDEEADPYTR   82 (302)
T ss_dssp             ----CCCEEEECSSSSCCCCTTCEECSSCEECTTCCCCCGGGCCCCCCSSTTGGGS--TTSGGGTTSCCC----------
T ss_pred             ccCCCCCEEEEeCCCCCCCCCCCEEeeeeecCCCccccCcccCCCccCcCCCCcCC--CCCcChhhcccccccccccccc
Confidence            47899999999999999889999999999998877653  3468999998  8986  5899999876            


Q ss_pred             -CCCcccCCC----cc----ccCCCceeecCCCCCCCCCCCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEe
Q 009453          446 -GDFPYTANG----VL----VSRKPLIYECGPSCPCNRDCKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEY  516 (534)
Q Consensus       446 -g~~~Y~~~G----~L----~~~~~~i~EC~~~C~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY  516 (534)
                       +.++|+.+|    +|    +..+.++|||++.|.|+.+|.||++|+|.+.+|+||+|..+||||||+++|++|+||+||
T Consensus        83 ~~~~~y~~~g~~~g~l~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY  162 (302)
T 1ml9_A           83 KKRFAYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRY  162 (302)
T ss_dssp             -CCSSBBCSSTTBTSBCHHHHHHCCCEECCCTTCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEEC
T ss_pred             ccccccccCCcccceeehhcccCCCCeEecCCCCCCCCCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEE
Confidence             458998765    33    235788999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEeCHHHHhhhc
Q 009453          517 AGEVVDKFKARQDG  530 (534)
Q Consensus       517 ~GEvIt~~E~~~~~  530 (534)
                      +||||+.+|+++|+
T Consensus       163 ~Gevi~~~e~~~R~  176 (302)
T 1ml9_A          163 LGEIITSEEADRRR  176 (302)
T ss_dssp             CCEEECHHHHHHHH
T ss_pred             eeEEeCHHHHHHHH
Confidence            99999999998764


No 8  
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=99.97  E-value=2.9e-31  Score=269.18  Aligned_cols=146  Identities=34%  Similarity=0.693  Sum_probs=125.5

Q ss_pred             cCCCCCCccccCcceeecCCCCCCCCceEEeeeeeecCCCCCC---CCCCCCcCCC-CCCCCCCCcccccccCCCCcccC
Q 009453          377 LPDLSSGAEAIPIALINDVDDEKGPAYFTYLTTVKYSKSFRLT---QPSFGCNCYS-ACGPGNPNCSCVQKNGGDFPYTA  452 (534)
Q Consensus       377 ~~DIS~G~E~~PV~vvNdVD~e~~P~~F~Yi~~~~~~~~~~~~---~~~~gC~C~~-~C~~~~~~C~C~~~ngg~~~Y~~  452 (534)
                      ..|||+|+|++||+++|+   ...|+.|+|++++++.....+.   ....||+|.+ .|.+  .+|+|..++   ..|+.
T Consensus        14 ~~Dis~G~E~~pi~~~n~---~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~~C~~--~~C~C~~~~---~~y~~   85 (290)
T 3bo5_A           14 QLDVACGQENLPVGAWPP---GAAPAPFQYTPDHVVGPGADIDPTQITFPGCICVKTPCLP--GTCSCLRHG---ENYDD   85 (290)
T ss_dssp             CSCTTTTCSSSCCEEEST---TCCCCCCEECSSCEECTTCSSCTTSCCCCCCCCCSSCCCT--TTCGGGTTS---CSBCT
T ss_pred             chhhhCCCCCCceeeECC---CCCCCCcEEeeceecCCCCcCCcccccCCCCCCCCCCcCC--CCCcchhhc---CccCc
Confidence            479999999999999998   3357899999999886654431   2357999986 6765  589999875   36887


Q ss_pred             CCccc------cCCCceeecCCCCCCCCCCCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHH
Q 009453          453 NGVLV------SRKPLIYECGPSCPCNRDCKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKA  526 (534)
Q Consensus       453 ~G~L~------~~~~~i~EC~~~C~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~  526 (534)
                      ++.|.      ....++|||++.|.|+.+|.||++|+|++.+|+||+|..+||||||+++|++|+||+||+||||+.+|+
T Consensus        86 ~~~l~~~~~~~~~~~~~~EC~~~C~C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~  165 (290)
T 3bo5_A           86 NSCLRDIGSGGKYAEPVFECNVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEV  165 (290)
T ss_dssp             TSCBCC-----CCCCCEECCCTTCCSCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHH
T ss_pred             cccccccccccccCCceEeCCCCCCCCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHH
Confidence            77663      345679999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q 009453          527 RQDG  530 (534)
Q Consensus       527 ~~~~  530 (534)
                      ++|+
T Consensus       166 ~~R~  169 (290)
T 3bo5_A          166 QRRI  169 (290)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875


No 9  
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.97  E-value=2.9e-31  Score=270.39  Aligned_cols=142  Identities=35%  Similarity=0.684  Sum_probs=125.2

Q ss_pred             cccCcceeecCCCCCCCCceEEeeeeeecCCCCC-CCCCCCCcCCCCCCCCCCCcccccccCCCCcccCCCccc-cCCCc
Q 009453          385 EAIPIALINDVDDEKGPAYFTYLTTVKYSKSFRL-TQPSFGCNCYSACGPGNPNCSCVQKNGGDFPYTANGVLV-SRKPL  462 (534)
Q Consensus       385 E~~PV~vvNdVD~e~~P~~F~Yi~~~~~~~~~~~-~~~~~gC~C~~~C~~~~~~C~C~~~ngg~~~Y~~~G~L~-~~~~~  462 (534)
                      +..||+++|+||++.+|..|+||+++++..++.+ .++..||+|.+ |.+  ..| |...+++.++|+.+|+|. ....+
T Consensus        40 ~~~~i~~~N~vd~~~~P~~f~yi~~~~~~~~~~~~~~~~~gC~C~~-C~~--~~c-c~~~~~~~~~Y~~~g~l~~~~~~~  115 (300)
T 2r3a_A           40 HKGMIFVENTVDLEGPPSDFYYINEYKPAPGISLVNEATFGCSCTD-CFF--QKC-CPAEAGVLLAYNKNQQIKIPPGTP  115 (300)
T ss_dssp             SSSCEEEECSSSCCCCCSSCEECSSCEECTTCCCC---CCCCCCSS-TTT--SSC-HHHHTTSCCSBCTTSCBCSCTTCC
T ss_pred             CCCCeEEEeCcCCccCCCCEEECcccccCCCCccCCCCCCCcCCcC-CCC--CCc-chhhccCccccccCCcEeccCCCc
Confidence            4569999999999998989999999999887765 45678999985 976  345 777778889999999885 45678


Q ss_pred             eeecCCCCCCCCCCCCceeccCceeceEEEEcc-CCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          463 IYECGPSCPCNRDCKNRVSQTGLKVRLDVFKTK-DRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       463 i~EC~~~C~C~~~C~NRvvQ~G~~~~LeVFrT~-~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      +|||++.|.|+..|.||++|+|++.+|+||+|. .+||||||+++|++|+||+||+||||+.+|+++|+
T Consensus       116 i~EC~~~C~C~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~  184 (300)
T 2r3a_A          116 IYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRG  184 (300)
T ss_dssp             EECCCTTSSCCTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHH
T ss_pred             EEeCCCCCCCCCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHH
Confidence            999999999999999999999999999999997 59999999999999999999999999999998775


No 10 
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=99.85  E-value=6e-22  Score=199.95  Aligned_cols=112  Identities=31%  Similarity=0.667  Sum_probs=89.7

Q ss_pred             CCCCCCceEEeeeeeecCCCCC-----CCCCCCCcCCC-----------CCCCCCCCcccccccCCCCcccCCCccccCC
Q 009453          397 DEKGPAYFTYLTTVKYSKSFRL-----TQPSFGCNCYS-----------ACGPGNPNCSCVQKNGGDFPYTANGVLVSRK  460 (534)
Q Consensus       397 ~e~~P~~F~Yi~~~~~~~~~~~-----~~~~~gC~C~~-----------~C~~~~~~C~C~~~ngg~~~Y~~~G~L~~~~  460 (534)
                      ....|+.|++|.+|+|......     ....+.|+|..           .|..   +|  .                 ++
T Consensus        33 ~~~~p~~~~~i~~n~y~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~~~~~C~~---~C--~-----------------nr   90 (278)
T 3h6l_A           33 QGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGE---DC--L-----------------NR   90 (278)
T ss_dssp             TTSSCCCCEECSSCEECC--------------CCCCCCCCHHHHHHTCCSSCT---TC--T-----------------TG
T ss_pred             cccCCCCceEeeeeeccccccccccccccccceeeccCCCcccccccCCCCCC---CC--C-----------------Cc
Confidence            3445789999999999854321     11246899974           3432   22  2                 34


Q ss_pred             CceeecCCCCCCCCCCCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          461 PLIYECGPSCPCNRDCKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       461 ~~i~EC~~~C~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      .++|||++.|.|+.+|.||++|+|.+.+|+||+|..+||||||.++|++|+||+||+||||+.+|+++|.
T Consensus        91 ~~~~EC~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~  160 (278)
T 3h6l_A           91 LLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARV  160 (278)
T ss_dssp             GGTBCCCTTCTTGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHH
T ss_pred             ceEeccCCCCCcCCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999999999999999988764


No 11 
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=99.82  E-value=8e-21  Score=186.81  Aligned_cols=113  Identities=28%  Similarity=0.634  Sum_probs=93.1

Q ss_pred             CCCCceEEeeeeeecCCCCC----CCCCCCCcCCCCCCCC---CCCcccccccCCCCcccCCCccccCCCceeecCC-CC
Q 009453          399 KGPAYFTYLTTVKYSKSFRL----TQPSFGCNCYSACGPG---NPNCSCVQKNGGDFPYTANGVLVSRKPLIYECGP-SC  470 (534)
Q Consensus       399 ~~P~~F~Yi~~~~~~~~~~~----~~~~~gC~C~~~C~~~---~~~C~C~~~ngg~~~Y~~~G~L~~~~~~i~EC~~-~C  470 (534)
                      +.|+.|..|..|++...+..    .+....|+|...+.+.   +.+  |.+                 +.++|||++ .|
T Consensus        15 ~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~~C~~~~~--C~n-----------------r~~~~EC~~~~C   75 (232)
T 3ooi_A           15 KKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSE--CIN-----------------RMLLYECHPTVC   75 (232)
T ss_dssp             CSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSSTTCTTSC--CHH-----------------HHTTBCCCTTTC
T ss_pred             CCCCCceEeeccccccccccccCCcccCCcccccCCCCCCCCCCCC--CcC-----------------cCceeEeCCCCC
Confidence            34778999999998765432    2346789998654321   122  332                 347899999 69


Q ss_pred             CCCCCCCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          471 PCNRDCKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       471 ~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      .|+.+|.||++|++...+|+||+|..+||||+|.++|++|+||+||+||||+.+|++++.
T Consensus        76 ~c~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~  135 (232)
T 3ooi_A           76 PAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARI  135 (232)
T ss_dssp             TTGGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHH
T ss_pred             CCCCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999988764


No 12 
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.81  E-value=5.6e-20  Score=179.52  Aligned_cols=113  Identities=31%  Similarity=0.644  Sum_probs=89.8

Q ss_pred             ceEEeeeeeecCCCCC-CCCCCCCcCCCCCCCCCCCcccccccCCCCcccCCCccccCCCceeecCC-CCCCCCCCCCce
Q 009453          403 YFTYLTTVKYSKSFRL-TQPSFGCNCYSACGPGNPNCSCVQKNGGDFPYTANGVLVSRKPLIYECGP-SCPCNRDCKNRV  480 (534)
Q Consensus       403 ~F~Yi~~~~~~~~~~~-~~~~~gC~C~~~C~~~~~~C~C~~~ngg~~~Y~~~G~L~~~~~~i~EC~~-~C~C~~~C~NRv  480 (534)
                      .|+.|.+|+|...-.+ ......|+|...+.+  ..|.|...             ..++.+++||++ .|+|+.+|.||+
T Consensus         2 ~~~~i~~n~~~~~~~~~~~~~~~C~C~~~~~~--~~~~c~~~-------------C~nr~~~~EC~~~~C~C~~~C~Nr~   66 (222)
T 3ope_A            2 SYKKIRSNVYVDVKPLSGYEATTCNCKKPDDD--TRKGCVDD-------------CLNRMIFAECSPNTCPCGEQCCNQR   66 (222)
T ss_dssp             CCEECSSCEECSCCCBCCCCCCCCCCCCCSCS--SSCSSCSC-------------CTTGGGTBCCCTTTCTTTTSCSSCT
T ss_pred             CccCcccceeeeeccCccccCccccCcCCCcC--CCCCCccc-------------CcCcCeEeEeCCCCCcCCCCCCCce
Confidence            4888999998763322 245689999865432  23444310             123457899998 799999999999


Q ss_pred             eccCcee-ceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          481 SQTGLKV-RLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       481 vQ~G~~~-~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      +|++... +|+||+|..+||||||+++|++|+||+||+||||+.+|++++.
T Consensus        67 ~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~  117 (222)
T 3ope_A           67 IQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRM  117 (222)
T ss_dssp             TTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHH
T ss_pred             EeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHH
Confidence            9999765 5999999999999999999999999999999999999987763


No 13 
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.12  E-value=7.2e-12  Score=120.14  Aligned_cols=60  Identities=23%  Similarity=0.334  Sum_probs=54.7

Q ss_pred             CCCCCCCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          471 PCNRDCKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       471 ~C~~~C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      .|...|+++.+|++.+.+|+||++..+||||+|.++|++|+||+||+||||+..++++|+
T Consensus        36 ~~~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~   95 (192)
T 2w5y_A           36 DLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKRE   95 (192)
T ss_dssp             SCCHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHH
T ss_pred             CCCcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHH
Confidence            445578899999999999999999999999999999999999999999999998887654


No 14 
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.09  E-value=2.7e-11  Score=111.97  Aligned_cols=55  Identities=16%  Similarity=0.389  Sum_probs=51.7

Q ss_pred             CCCceeccCceeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          476 CKNRVSQTGLKVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       476 C~NRvvQ~G~~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      ..++++|+|...+|+|+++..+||||+|.++|++|+||+||+||||+..|++.++
T Consensus        19 ~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~   73 (166)
T 3f9x_A           19 RIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKRE   73 (166)
T ss_dssp             HHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHH
T ss_pred             HHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999999988764


No 15 
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.87  E-value=2e-09  Score=107.65  Aligned_cols=70  Identities=17%  Similarity=0.147  Sum_probs=58.1

Q ss_pred             CCceeecCCCCCCCCCCCCceeccCc-eeceEEEEcc--CCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          460 KPLIYECGPSCPCNRDCKNRVSQTGL-KVRLDVFKTK--DRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       460 ~~~i~EC~~~C~C~~~C~NRvvQ~G~-~~~LeVFrT~--~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      ..++|+|+..|.. ..|.|.+++... ...++|.++.  ++||||||+++|++|+|||||+||||+.+|+++|.
T Consensus        82 ~~~~~~~d~~~~~-~i~~~~~~~~~~~~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~  154 (261)
T 2f69_A           82 GNSVYHFDKSTSS-CISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRD  154 (261)
T ss_dssp             SCCEECCCCCCSS-CSCSCTTSCCHHHHTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSC
T ss_pred             CCceEecCcccCc-ceeCccccCCcccCceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHh
Confidence            4578999987642 357788776654 4678999887  46999999999999999999999999999998876


No 16 
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=98.62  E-value=1.2e-08  Score=89.77  Aligned_cols=46  Identities=20%  Similarity=0.112  Sum_probs=41.9

Q ss_pred             eeceEEEEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhcC
Q 009453          486 KVRLDVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDGE  531 (534)
Q Consensus       486 ~~~LeVFrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~e  531 (534)
                      ..+++|+++..+||||+|.++|++|+||+||.||+|+.+|++....
T Consensus         3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~~~   48 (119)
T 1n3j_A            3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALE   48 (119)
T ss_dssp             CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHHSC
T ss_pred             CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhccC
Confidence            4689999999999999999999999999999999999999876443


No 17 
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.35  E-value=1.4e-07  Score=86.96  Aligned_cols=52  Identities=17%  Similarity=0.359  Sum_probs=44.8

Q ss_pred             CCCCceeccCceeceEEEEcc--CCCcceeecCcCCCCCeEEEeeeEEeCHHHHh
Q 009453          475 DCKNRVSQTGLKVRLDVFKTK--DRGWGLRSLDPIRAGTFICEYAGEVVDKFKAR  527 (534)
Q Consensus       475 ~C~NRvvQ~G~~~~LeVFrT~--~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~  527 (534)
                      .++||+ ++++...|+|.++.  .+||||+|.++|++|+||+||+||+|+.+|++
T Consensus        18 ~~~~~~-~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~   71 (149)
T 2qpw_A           18 EVPEHV-LRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK   71 (149)
T ss_dssp             GSCHHH-HHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC
T ss_pred             hhhHHH-HhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc
Confidence            456664 45688999999985  68999999999999999999999999988764


No 18 
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.32  E-value=5.3e-07  Score=90.62  Aligned_cols=45  Identities=20%  Similarity=0.171  Sum_probs=40.5

Q ss_pred             eeceEEEEccC--CCcceeecCcCCCCCeEEEeeeEEeCHHHHhhhc
Q 009453          486 KVRLDVFKTKD--RGWGLRSLDPIRAGTFICEYAGEVVDKFKARQDG  530 (534)
Q Consensus       486 ~~~LeVFrT~~--kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~~  530 (534)
                      ..+|+|+++.-  |||||||+++|++|+|||||+||+|+.+|+++|.
T Consensus       162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~  208 (293)
T 1h3i_A          162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRD  208 (293)
T ss_dssp             HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSC
T ss_pred             ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHh
Confidence            45789999865  5699999999999999999999999999998875


No 19 
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=97.88  E-value=3.7e-06  Score=84.73  Aligned_cols=36  Identities=8%  Similarity=0.120  Sum_probs=31.3

Q ss_pred             EEccCCCcceeecCcCCCCCeEEEeeeEEeCHHHHh
Q 009453          492 FKTKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKAR  527 (534)
Q Consensus       492 FrT~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~  527 (534)
                      |+++.+||||+|.++|++|+||+||+|||++..+++
T Consensus       141 y~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~e  176 (273)
T 3s8p_A          141 YSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIE  176 (273)
T ss_dssp             CTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHH
T ss_pred             eeecCCCceEEECCccCCCCEEEEEEEEEccccHHH
Confidence            566779999999999999999999999998655543


No 20 
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.53  E-value=7.4e-05  Score=70.37  Aligned_cols=46  Identities=22%  Similarity=0.263  Sum_probs=36.4

Q ss_pred             cCceeceEEEEcc--CCCcceeecCcCCCCCeEEEeeeEEeCHHHHhh
Q 009453          483 TGLKVRLDVFKTK--DRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQ  528 (534)
Q Consensus       483 ~G~~~~LeVFrT~--~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~  528 (534)
                      ..+-..|+|.++.  .+||||+|.++|++|+++++|+||+++.+|+..
T Consensus        23 lsLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~   70 (170)
T 3ep0_A           23 LVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDI   70 (170)
T ss_dssp             SSCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC-----
T ss_pred             cCCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhcc
Confidence            4566788888874  579999999999999999999999999988654


No 21 
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=97.24  E-value=0.0001  Score=73.21  Aligned_cols=33  Identities=12%  Similarity=0.072  Sum_probs=28.4

Q ss_pred             ccCCCcceeecCcCCCCCeEEEeeeEEeCHHHH
Q 009453          494 TKDRGWGLRSLDPIRAGTFICEYAGEVVDKFKA  526 (534)
Q Consensus       494 T~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~  526 (534)
                      +..+||||+|.++|++|+||+||+|||+...+.
T Consensus       115 ~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~  147 (247)
T 3rq4_A          115 METNGAKIVSTRAWKKNEKLELLVGCIAELREA  147 (247)
T ss_dssp             TCSSCEEEEESSCBCTTCEEEEEEEEEEECCGG
T ss_pred             ecCCcceEEeCCccCCCCEEEEEEeEEEeCcHH
Confidence            346899999999999999999999999854443


No 22 
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=96.89  E-value=0.00032  Score=67.48  Aligned_cols=46  Identities=20%  Similarity=0.145  Sum_probs=37.6

Q ss_pred             CceeceEEEEcc--CCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhh
Q 009453          484 GLKVRLDVFKTK--DRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQD  529 (534)
Q Consensus       484 G~~~~LeVFrT~--~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~  529 (534)
                      -+-..|+|..+.  ..||||+|.+.|++|+++++|.||+++.+|+.++
T Consensus        55 SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~  102 (196)
T 3dal_A           55 SLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN  102 (196)
T ss_dssp             TCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC--
T ss_pred             cCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc
Confidence            345677777775  4999999999999999999999999999876443


No 23 
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=96.87  E-value=0.00049  Score=63.26  Aligned_cols=46  Identities=13%  Similarity=0.105  Sum_probs=31.5

Q ss_pred             CceeceEEEEc-cCCCcceeecCcCCCCCeEEEeeeEEeCHHHHhhh
Q 009453          484 GLKVRLDVFKT-KDRGWGLRSLDPIRAGTFICEYAGEVVDKFKARQD  529 (534)
Q Consensus       484 G~~~~LeVFrT-~~kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~~~  529 (534)
                      -+-..|+|-.+ .+.|+||+|.+.|++|+++++|.||+++.+|+..+
T Consensus        20 slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~   66 (151)
T 3db5_A           20 SLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEW   66 (151)
T ss_dssp             TCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-------
T ss_pred             cCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcc
Confidence            34456777665 35899999999999999999999999999988654


No 24 
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=94.71  E-value=0.013  Score=57.83  Aligned_cols=43  Identities=19%  Similarity=0.344  Sum_probs=35.3

Q ss_pred             ceeceEEEEccCCCcceeec-CcCCCCCeEEEeeeEEeCHHHHh
Q 009453          485 LKVRLDVFKTKDRGWGLRSL-DPIRAGTFICEYAGEVVDKFKAR  527 (534)
Q Consensus       485 ~~~~LeVFrT~~kGWGVRa~-~~I~~G~FIcEY~GEvIt~~E~~  527 (534)
                      +-..|+|.++...|+||+++ +.|++|+.+++|.||+++..+++
T Consensus        70 LP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~  113 (237)
T 3ray_A           70 IPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA  113 (237)
T ss_dssp             CCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC----
T ss_pred             CCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc
Confidence            44568999998899999988 89999999999999999887753


No 25 
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=93.85  E-value=0.019  Score=52.83  Aligned_cols=31  Identities=19%  Similarity=0.016  Sum_probs=28.8

Q ss_pred             CCcceeecCcCCCCCeEEEeeeEEeCHHHHh
Q 009453          497 RGWGLRSLDPIRAGTFICEYAGEVVDKFKAR  527 (534)
Q Consensus       497 kGWGVRa~~~I~~G~FIcEY~GEvIt~~E~~  527 (534)
                      .|+||+|.+.|++|+.+.+|.||+++.+|+.
T Consensus        30 ~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~   60 (152)
T 3ihx_A           30 FLGGVFSKRRIPKRTQFGPVEGPLVRGSELK   60 (152)
T ss_dssp             TTCSEEESSCBCSSCEECCCCSCEECSTTCC
T ss_pred             cCCeEEECceecCCCEEEeeccEEcCHHHhc
Confidence            5899999999999999999999999988763


No 26 
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=31.18  E-value=20  Score=24.67  Aligned_cols=16  Identities=31%  Similarity=1.273  Sum_probs=7.4

Q ss_pred             CCcCCCCCCCCCCCccc
Q 009453          424 GCNCYSACGPGNPNCSC  440 (534)
Q Consensus       424 gC~C~~~C~~~~~~C~C  440 (534)
                      .|.|..+|.. +.+|+|
T Consensus        19 scscptgcns-ddkcpc   34 (36)
T 1rju_V           19 SCSCPTGCNS-DDKCPC   34 (36)
T ss_dssp             SCCSCTTCCC-GGGCCT
T ss_pred             cCCCCCCCCC-CCcCCC
Confidence            4555545544 234444


No 27 
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=28.81  E-value=30  Score=25.55  Aligned_cols=22  Identities=27%  Similarity=0.902  Sum_probs=13.2

Q ss_pred             CCCCcCCCCCCCCCCCccccccc
Q 009453          422 SFGCNCYSACGPGNPNCSCVQKN  444 (534)
Q Consensus       422 ~~gC~C~~~C~~~~~~C~C~~~n  444 (534)
                      ...|.|..+|.. +..|+|.++.
T Consensus        21 qkscscptgcns-ddkcpcgnks   42 (53)
T 1aqs_A           21 QKSCSCPTGCNS-DDKCPCGNKS   42 (53)
T ss_dssp             TTSCSCCTTCSS-SSSCCCCC--
T ss_pred             hhcCCCCCCCCC-CCcCCCCCcc
Confidence            346777777776 4577776543


No 28 
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=21.28  E-value=57  Score=34.91  Aligned_cols=29  Identities=24%  Similarity=0.448  Sum_probs=24.4

Q ss_pred             ceEEEEccCCCcceeecCcCCCCCeEEEe
Q 009453          488 RLDVFKTKDRGWGLRSLDPIRAGTFICEY  516 (534)
Q Consensus       488 ~LeVFrT~~kGWGVRa~~~I~~G~FIcEY  516 (534)
                      .++|......|+||++..+|++|+.|..-
T Consensus        94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~I  122 (497)
T 3smt_A           94 GFEMVNFKEEGFGLRATRDIKAEELFLWV  122 (497)
T ss_dssp             TEEEEEETTTEEEEEESSCBCTTCEEEEE
T ss_pred             ceEEEEcCCCccEEEEcccCCCCCEEEEc
Confidence            46677777899999999999999987754


Done!