Query 009462
Match_columns 534
No_of_seqs 198 out of 1526
Neff 6.3
Searched_HMMs 46136
Date Thu Mar 28 13:24:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009462.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009462hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 1.5E-77 3.2E-82 646.7 24.3 379 52-486 216-628 (634)
2 KOG0782 Predicted diacylglycer 100.0 1.1E-66 2.4E-71 544.4 16.6 338 77-482 361-701 (1004)
3 KOG1170 Diacylglycerol kinase 100.0 1.9E-64 4.2E-69 543.8 6.4 418 54-519 160-838 (1099)
4 PRK13057 putative lipid kinase 100.0 1.4E-41 3E-46 346.7 32.5 274 85-478 1-285 (287)
5 PRK13059 putative lipid kinase 100.0 6.5E-41 1.4E-45 343.3 31.9 278 82-478 2-293 (295)
6 TIGR03702 lip_kinase_YegS lipi 100.0 3.9E-40 8.4E-45 337.1 32.9 283 83-480 1-290 (293)
7 PRK11914 diacylglycerol kinase 100.0 3.5E-40 7.6E-45 339.1 32.3 287 80-479 7-305 (306)
8 PRK13054 lipid kinase; Reviewe 100.0 8.1E-40 1.8E-44 335.8 33.8 286 80-480 2-296 (300)
9 PRK13055 putative lipid kinase 100.0 1E-39 2.3E-44 340.0 32.3 286 81-477 2-300 (334)
10 PRK13337 putative lipid kinase 100.0 1.2E-39 2.6E-44 335.2 32.1 284 82-480 2-296 (304)
11 PRK00861 putative lipid kinase 100.0 7.5E-39 1.6E-43 328.4 34.0 282 81-479 2-298 (300)
12 TIGR00147 lipid kinase, YegS/R 100.0 4.3E-39 9.4E-44 328.6 31.0 279 82-475 2-292 (293)
13 COG1597 LCB5 Sphingosine kinas 100.0 2E-37 4.3E-42 318.4 31.3 286 81-481 2-299 (301)
14 PRK12361 hypothetical protein; 100.0 1.3E-36 2.8E-41 335.9 32.5 287 81-479 242-543 (547)
15 PF00609 DAGK_acc: Diacylglyce 100.0 6.3E-38 1.4E-42 294.6 12.9 160 276-450 2-161 (161)
16 PLN02958 diacylglycerol kinase 100.0 7.4E-36 1.6E-40 324.2 28.9 295 80-476 110-464 (481)
17 PLN02204 diacylglycerol kinase 100.0 1.6E-30 3.5E-35 283.4 32.5 315 80-478 158-598 (601)
18 smart00045 DAGKa Diacylglycero 99.9 6.9E-24 1.5E-28 199.0 10.5 159 276-450 2-160 (160)
19 PF00781 DAGK_cat: Diacylglyce 99.9 5.2E-22 1.1E-26 179.6 12.3 122 83-229 1-128 (130)
20 smart00046 DAGKc Diacylglycero 99.8 4.4E-21 9.5E-26 172.8 11.4 100 85-199 1-101 (124)
21 KOG1116 Sphingosine kinase, in 99.8 1.4E-19 3.1E-24 194.8 24.3 300 80-479 178-568 (579)
22 KOG1115 Ceramide kinase [Lipid 99.5 5.2E-13 1.1E-17 138.1 16.1 295 81-468 158-500 (516)
23 KOG4435 Predicted lipid kinase 98.6 2.2E-07 4.8E-12 96.8 11.2 130 81-225 60-195 (535)
24 PRK03708 ppnK inorganic polyph 98.0 4.1E-05 8.9E-10 78.5 10.6 113 83-221 2-115 (277)
25 PRK02645 ppnK inorganic polyph 97.9 9.4E-05 2E-09 76.8 11.4 122 81-230 3-127 (305)
26 PRK14075 pnk inorganic polypho 97.5 0.035 7.7E-07 56.3 23.0 48 419-476 188-235 (256)
27 PRK03378 ppnK inorganic polyph 97.5 0.00083 1.8E-08 69.4 11.0 124 81-230 5-131 (292)
28 COG3199 Predicted inorganic po 97.3 0.002 4.3E-08 67.1 11.0 55 150-218 102-157 (355)
29 PRK01231 ppnK inorganic polyph 97.0 0.008 1.7E-07 62.3 12.8 122 81-230 4-130 (295)
30 PF01513 NAD_kinase: ATP-NAD k 96.9 0.006 1.3E-07 62.7 10.2 69 148-230 76-144 (285)
31 PRK03372 ppnK inorganic polyph 96.4 0.051 1.1E-06 56.6 13.3 129 80-229 4-139 (306)
32 PRK14077 pnk inorganic polypho 96.3 0.057 1.2E-06 55.8 12.8 123 78-229 7-131 (287)
33 PRK04539 ppnK inorganic polyph 96.1 0.084 1.8E-06 54.8 13.0 128 80-229 4-135 (296)
34 PRK02155 ppnK NAD(+)/NADH kina 96.1 0.073 1.6E-06 55.1 12.4 124 81-230 5-131 (291)
35 PRK02649 ppnK inorganic polyph 95.9 0.13 2.9E-06 53.5 13.5 128 82-229 2-135 (305)
36 PRK03501 ppnK inorganic polyph 95.6 0.17 3.8E-06 51.6 12.6 105 82-229 3-108 (264)
37 PRK01911 ppnK inorganic polyph 95.6 0.2 4.4E-06 51.9 13.1 127 83-229 2-131 (292)
38 PLN02935 Bifunctional NADH kin 95.2 0.26 5.6E-06 54.5 13.0 130 80-228 193-328 (508)
39 PRK00561 ppnK inorganic polyph 94.0 0.61 1.3E-05 47.6 11.6 73 399-474 163-238 (259)
40 PRK14076 pnk inorganic polypho 93.5 0.72 1.6E-05 52.2 12.3 66 149-228 349-414 (569)
41 PRK04885 ppnK inorganic polyph 92.9 0.87 1.9E-05 46.6 10.7 99 84-226 3-101 (265)
42 PRK01185 ppnK inorganic polyph 91.8 1.4 3E-05 45.3 10.6 114 83-229 2-116 (271)
43 PLN02727 NAD kinase 91.7 1.3 2.8E-05 52.3 11.2 123 78-220 675-801 (986)
44 PRK02231 ppnK inorganic polyph 90.7 1.5 3.2E-05 45.1 9.6 67 149-229 43-110 (272)
45 PLN02929 NADH kinase 90.2 1.7 3.7E-05 45.3 9.5 73 148-228 64-147 (301)
46 PRK04761 ppnK inorganic polyph 88.2 0.97 2.1E-05 45.8 5.9 56 420-480 178-233 (246)
47 PF10254 Pacs-1: PACS-1 cytoso 87.7 2 4.3E-05 46.6 8.2 47 148-196 75-128 (414)
48 cd08197 DOIS 2-deoxy-scyllo-in 83.6 4.3 9.4E-05 43.2 8.3 96 82-189 24-125 (355)
49 COG0061 nadF NAD kinase [Coenz 83.3 6.3 0.00014 40.6 9.1 70 148-231 55-124 (281)
50 cd08169 DHQ-like Dehydroquinat 78.1 9.5 0.00021 40.4 8.6 97 82-190 24-125 (344)
51 PF00731 AIRC: AIR carboxylase 75.3 13 0.00028 35.0 7.6 82 92-187 7-89 (150)
52 cd08180 PDD 1,3-propanediol de 73.2 20 0.00044 37.5 9.5 44 148-192 78-127 (332)
53 TIGR03405 Phn_Fe-ADH phosphona 73.2 21 0.00046 37.8 9.7 102 82-195 24-147 (355)
54 cd08195 DHQS Dehydroquinate sy 71.6 14 0.00029 39.1 7.7 91 82-184 25-119 (345)
55 cd08176 LPO Lactadehyde:propan 71.0 17 0.00036 38.9 8.3 49 148-197 85-150 (377)
56 cd08179 NADPH_BDH NADPH-depend 70.4 23 0.00049 37.8 9.2 123 60-195 2-147 (375)
57 PRK00002 aroB 3-dehydroquinate 69.2 18 0.00039 38.4 8.1 98 81-190 31-134 (358)
58 PRK09860 putative alcohol dehy 68.0 31 0.00067 37.1 9.6 126 59-197 5-153 (383)
59 TIGR01357 aroB 3-dehydroquinat 65.9 23 0.0005 37.3 8.0 91 82-184 21-115 (344)
60 cd07766 DHQ_Fe-ADH Dehydroquin 64.8 30 0.00066 36.0 8.6 37 149-187 79-117 (332)
61 cd08187 BDH Butanol dehydrogen 64.4 33 0.00072 36.7 9.0 126 59-197 3-151 (382)
62 cd08181 PPD-like 1,3-propanedi 63.3 38 0.00083 35.9 9.2 47 149-196 84-146 (357)
63 cd08186 Fe-ADH8 Iron-containin 59.6 42 0.00092 35.9 8.8 103 82-196 27-149 (383)
64 PRK10624 L-1,2-propanediol oxi 58.6 42 0.00091 35.9 8.5 124 58-196 3-153 (382)
65 cd08172 GlyDH-like1 Glycerol d 58.5 63 0.0014 34.0 9.7 92 82-193 24-119 (347)
66 PRK15138 aldehyde reductase; P 58.0 48 0.001 35.7 8.8 124 59-196 5-152 (387)
67 TIGR02638 lactal_redase lactal 57.7 63 0.0014 34.6 9.7 125 59-196 3-152 (379)
68 cd08170 GlyDH Glycerol dehydro 57.1 57 0.0012 34.4 9.1 95 82-195 23-122 (351)
69 cd08551 Fe-ADH iron-containing 57.1 44 0.00095 35.5 8.3 47 149-196 81-144 (370)
70 KOG4180 Predicted kinase [Gene 56.8 5.7 0.00012 41.6 1.5 62 149-221 106-169 (395)
71 cd08183 Fe-ADH2 Iron-containin 55.8 45 0.00097 35.6 8.2 95 82-195 23-142 (374)
72 cd08194 Fe-ADH6 Iron-containin 55.4 72 0.0016 34.0 9.6 97 82-193 24-141 (375)
73 cd08173 Gro1PDH Sn-glycerol-1- 55.1 52 0.0011 34.5 8.4 87 82-188 26-114 (339)
74 cd08550 GlyDH-like Glycerol_de 54.8 40 0.00086 35.6 7.5 41 149-193 78-120 (349)
75 cd08199 EEVS 2-epi-5-epi-valio 54.0 49 0.0011 35.2 8.0 33 150-184 90-122 (354)
76 PRK09423 gldA glycerol dehydro 53.0 47 0.001 35.3 7.7 115 58-193 3-127 (366)
77 PLN00180 NDF6 (NDH-dependent f 52.5 3 6.5E-05 39.0 -1.2 14 154-167 130-143 (180)
78 COG1454 EutG Alcohol dehydroge 51.9 1.1E+02 0.0023 33.2 10.1 125 58-197 2-151 (377)
79 cd08185 Fe-ADH1 Iron-containin 51.3 77 0.0017 33.8 9.1 104 82-197 26-153 (380)
80 TIGR02482 PFKA_ATP 6-phosphofr 50.6 59 0.0013 34.0 7.8 39 150-192 93-131 (301)
81 PLN02834 3-dehydroquinate synt 50.0 56 0.0012 35.8 7.9 93 81-185 100-198 (433)
82 PTZ00286 6-phospho-1-fructokin 48.8 22 0.00047 39.4 4.4 57 150-216 178-240 (459)
83 cd08177 MAR Maleylacetate redu 48.8 83 0.0018 33.0 8.7 88 82-189 24-115 (337)
84 TIGR02483 PFK_mixed phosphofru 48.1 59 0.0013 34.3 7.4 37 150-191 96-132 (324)
85 cd08171 GlyDH-like2 Glycerol d 48.0 53 0.0012 34.6 7.2 37 148-188 78-116 (345)
86 cd08189 Fe-ADH5 Iron-containin 47.7 82 0.0018 33.6 8.6 47 149-196 84-148 (374)
87 COG1691 NCAIR mutase (PurE)-re 47.6 28 0.00061 35.0 4.5 57 113-187 150-206 (254)
88 PRK15454 ethanol dehydrogenase 47.2 80 0.0017 34.1 8.5 126 58-196 22-170 (395)
89 cd08192 Fe-ADH7 Iron-containin 46.0 90 0.0019 33.2 8.5 45 148-193 81-146 (370)
90 PF12219 End_tail_spike: Catal 45.0 11 0.00023 34.8 1.1 14 149-162 85-98 (160)
91 cd08188 Fe-ADH4 Iron-containin 44.8 83 0.0018 33.6 8.1 47 148-195 85-148 (377)
92 cd00763 Bacterial_PFK Phosphof 43.4 78 0.0017 33.3 7.4 37 150-191 94-130 (317)
93 PRK00843 egsA NAD(P)-dependent 43.2 1E+02 0.0022 32.6 8.3 37 149-189 88-124 (350)
94 cd08175 G1PDH Glycerol-1-phosp 43.1 69 0.0015 33.7 7.1 34 148-185 80-113 (348)
95 cd08182 HEPD Hydroxyethylphosp 41.0 1.5E+02 0.0032 31.5 9.2 44 149-193 78-142 (367)
96 cd08196 DHQS-like1 Dehydroquin 40.8 1.6E+02 0.0034 31.4 9.3 91 82-184 20-110 (346)
97 cd08174 G1PDH-like Glycerol-1- 40.6 1.7E+02 0.0037 30.5 9.6 36 149-188 76-111 (331)
98 PRK06830 diphosphate--fructose 40.5 30 0.00065 38.2 3.9 48 150-197 174-225 (443)
99 cd08184 Fe-ADH3 Iron-containin 40.5 1.3E+02 0.0029 31.8 8.8 47 149-196 82-145 (347)
100 PRK06203 aroB 3-dehydroquinate 40.5 1.4E+02 0.003 32.3 9.0 92 81-184 42-145 (389)
101 PF00465 Fe-ADH: Iron-containi 39.0 79 0.0017 33.4 6.8 99 83-197 23-144 (366)
102 PLN02564 6-phosphofructokinase 38.7 40 0.00088 37.5 4.6 40 150-191 178-220 (484)
103 PRK14072 6-phosphofructokinase 37.8 89 0.0019 34.2 7.0 40 150-191 105-147 (416)
104 cd00363 PFK Phosphofructokinas 37.7 93 0.002 33.0 7.0 42 150-191 94-136 (338)
105 TIGR01162 purE phosphoribosyla 37.0 1.2E+02 0.0026 28.7 6.8 77 93-187 6-87 (156)
106 cd08178 AAD_C C-terminal alcoh 35.3 2.4E+02 0.0051 30.4 9.8 48 148-196 78-153 (398)
107 PRK03202 6-phosphofructokinase 35.0 1.2E+02 0.0026 32.0 7.2 38 150-192 95-132 (320)
108 cd08198 DHQS-like2 Dehydroquin 33.7 2.5E+02 0.0053 30.3 9.5 93 81-185 30-134 (369)
109 cd01836 FeeA_FeeB_like SGNH_hy 31.8 1.1E+02 0.0024 28.5 5.8 60 150-217 43-102 (191)
110 cd02007 TPP_DXS Thiamine pyrop 30.9 1.4E+02 0.003 28.9 6.4 67 149-215 97-176 (195)
111 PLN02884 6-phosphofructokinase 30.2 1.3E+02 0.0027 33.0 6.6 42 150-191 145-187 (411)
112 COG1979 Uncharacterized oxidor 29.8 2.4E+02 0.0051 30.2 8.1 88 59-157 5-94 (384)
113 KOG2178 Predicted sugar kinase 28.6 29 0.00064 37.4 1.4 57 150-220 170-226 (409)
114 cd08193 HVD 5-hydroxyvalerate 28.0 2.6E+02 0.0055 29.8 8.5 44 149-193 84-144 (376)
115 PLN03028 pyrophosphate--fructo 27.5 1.2E+02 0.0026 34.9 6.1 45 151-197 176-228 (610)
116 cd04502 SGNH_hydrolase_like_7 27.3 68 0.0015 29.4 3.5 61 151-218 26-86 (171)
117 PRK06555 pyrophosphate--fructo 27.2 1.4E+02 0.003 32.6 6.3 40 150-191 114-156 (403)
118 cd08549 G1PDH_related Glycerol 27.0 2.2E+02 0.0048 29.8 7.7 34 148-185 80-113 (332)
119 PRK14071 6-phosphofructokinase 26.7 2.2E+02 0.0048 30.5 7.7 38 150-191 109-146 (360)
120 PRK10586 putative oxidoreducta 25.9 3E+02 0.0064 29.4 8.5 39 149-191 87-127 (362)
121 TIGR02477 PFKA_PPi diphosphate 25.7 1.2E+02 0.0027 34.3 5.7 40 151-192 164-206 (539)
122 PRK07085 diphosphate--fructose 25.1 1.7E+02 0.0038 33.3 6.7 71 151-229 167-246 (555)
123 TIGR03846 sulfopy_beta sulfopy 23.7 2.1E+02 0.0045 27.4 6.2 77 149-225 59-153 (181)
124 cd08191 HHD 6-hydroxyhexanoate 23.6 3.7E+02 0.008 28.8 8.7 48 148-196 79-143 (386)
125 PRK13805 bifunctional acetalde 22.4 4.6E+02 0.01 31.4 10.0 97 59-168 456-558 (862)
126 PRK14021 bifunctional shikimat 21.8 3.6E+02 0.0077 30.5 8.5 42 149-192 270-313 (542)
127 PTZ00287 6-phosphofructokinase 21.7 1.7E+02 0.0037 36.8 6.1 46 150-197 930-983 (1419)
128 PTZ00468 phosphofructokinase f 21.3 1.1E+02 0.0023 38.3 4.3 43 150-192 802-850 (1328)
129 TIGR03590 PseG pseudaminic aci 21.1 4.6E+02 0.01 26.5 8.5 35 141-184 234-268 (279)
130 cd01831 Endoglucanase_E_like E 21.0 1.4E+02 0.0031 27.4 4.4 50 148-218 44-93 (169)
131 TIGR02478 6PF1K_euk 6-phosphof 20.8 2.6E+02 0.0056 33.1 7.3 42 150-191 480-523 (745)
132 PF00365 PFK: Phosphofructokin 20.5 81 0.0017 32.6 2.8 39 150-192 94-132 (282)
133 PF13685 Fe-ADH_2: Iron-contai 20.2 1.4E+02 0.0029 30.4 4.3 36 150-189 77-112 (250)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-77 Score=646.70 Aligned_cols=379 Identities=34% Similarity=0.603 Sum_probs=313.8
Q ss_pred ccccccCcccccCceeecCCccc--------------------------ccCCCCCCeEEEEEcCCCCCCChhhHHHHHH
Q 009462 52 PKSKILNNYYIPNYILVSGSEVQ--------------------------RSSLIPSCPVLVFINSKSGGQLGGKLLLTYR 105 (534)
Q Consensus 52 ~~~~~~~~~~ip~~~~~~~~~~~--------------------------~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~ 105 (534)
+..+.+++.++|++++.+....+ .....+.+|++|||||||||++|..++++|+
T Consensus 216 ~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PLlVfvNpKSGg~~G~~ll~~f~ 295 (634)
T KOG1169|consen 216 CDLGELKDHILPPSTLRPARTARVASDHSGLPGEKSEEVTDAKKMQQLLVTDPPDWRPLLVFVNPKSGGQQGERLLRRFR 295 (634)
T ss_pred ccChhhhhccCCceeeecccccccccccccccccccccccccccccccccCCCCCCcceEEEEecCCcccccHHHHHHHH
Confidence 57889999999999988864431 2335567999999999999999999999999
Q ss_pred HHhccCcEEEEeecC-chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCC---CCCCEEE
Q 009462 106 SLLNENQVIDLGEKA-PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLP---HSPPVAT 181 (534)
Q Consensus 106 ~~L~~~qVfdL~~~~-p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~---~~~plgi 181 (534)
.+|||.|||||+..+ |..++. +++++ ..+||+||||||||+|||+.+.+++.. ..|||||
T Consensus 296 ~lLnp~QVfdl~~~~~p~~gL~-l~~~~---------------~~~riLVcGGDGTvGWVL~~i~~~n~~~~~~~PpVAi 359 (634)
T KOG1169|consen 296 YLLNPVQVFDLLKRGGPRPGLT-LFRDV---------------PDFRILVCGGDGTVGWVLGCIDKLNKQNAIPPPPVAI 359 (634)
T ss_pred HhcChhhEEecccCCCCchhHH-HHHhC---------------CcceEEEecCCCcchhhhhhHHHhhccccCCCCCeEE
Confidence 999999999999874 888886 44443 356999999999999999999987643 4899999
Q ss_pred eeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCCCCCCCCCCCCcccccccccccc
Q 009462 182 VPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQK 261 (534)
Q Consensus 182 IPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 261 (534)
+|+||||||||+|+||.+|++.+.. +.++|+.|..|.++++|+|+|.+++... +.. +.+++.-
T Consensus 360 lPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~-----~~~-----~~~~~~~------ 422 (634)
T KOG1169|consen 360 LPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSG-----ELV-----QYSLKPP------ 422 (634)
T ss_pred EecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeecccc-----ccc-----cccccCC------
Confidence 9999999999999999999997644 9999999999999999999999876432 100 0111100
Q ss_pred cccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhhhccccccCCCCCcCCcceEEE
Q 009462 262 DKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKV 341 (534)
Q Consensus 262 ~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~l~~~i~l 341 (534)
..+...+...|+||||||+||+|+++||..|+++|++|+||++||++|+.+|++. ||+++ ++++...+++
T Consensus 423 ----~~~~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q~-~f~~~-----ck~~~~~i~i 492 (634)
T KOG1169|consen 423 ----EKGDPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQE-TFAAR-----CKNLHLHIKI 492 (634)
T ss_pred ----CcCCCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecchh-hHHHh-----hcCCccceEE
Confidence 0111233457999999999999999999999999999999999999999999866 77765 4554444566
Q ss_pred EEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHHHHHHccCCCc
Q 009462 342 KIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHG 421 (534)
Q Consensus 342 ~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~~~l~~~~~~~ 421 (534)
.+ +++|+.+++|.++++|+++|++|||||.++|++.++.+...+.+..+..|||++|||+|++.||++++++++.++
T Consensus 493 ~~---~~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~~~~~~d~~dgliEvvgv~~~~h~~~~qvgL~~a 569 (634)
T KOG1169|consen 493 EL---DGDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFRGFSEADDDDGLIEVVGVQDSWHLLQEQVGLESA 569 (634)
T ss_pred EE---cccceEccCCCCceeEEEEcccccccCcccccccCccccccccccccCCCcCeEEEEEeccchhhhhhhhccchh
Confidence 66 566668999999999999999999999999998776665666777888889999999999999999999999999
Q ss_pred cEEEe---ecE-EEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeEEeCCCCCcCccc
Q 009462 422 TRLAQ---ANR-VRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATPCCRSRSIN 486 (534)
Q Consensus 422 ~rl~Q---~~~-v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL~~~~~~~~~~~ 486 (534)
+|++| .+. ++|...+ ..|||||||||+|+ |++|+|+|++|+.||++.++......
T Consensus 570 ~rigQ~~a~~~~~~i~~~k----~~PMQiDGEPW~Q~------p~tI~Ithk~q~~mL~~~~~~~~~~~ 628 (634)
T KOG1169|consen 570 LRIGQRLAQCSERVIGTKK----TFPMQIDGEPWMQP------PCTIEITHKNQAPMLMKAAKEKRRRF 628 (634)
T ss_pred hHHHHHhhccEEEEecccc----CcceecCCccccCC------CceEEEEecchHhhhhcccccccCcc
Confidence 99996 333 4477766 79999999999997 79999999999999999887554433
No 2
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-66 Score=544.45 Aligned_cols=338 Identities=36% Similarity=0.613 Sum_probs=282.4
Q ss_pred CCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009462 77 SLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (534)
Q Consensus 77 ~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~G 156 (534)
+..+++|++|||||||||++|.++++.|..+|||.|||||+..+|..+|+ +|+++ ..+||+|||
T Consensus 361 sSplmkPLLVFVNPKSGGNqGsK~lq~f~WyLNPRQVFDlsq~GPK~aLE-myRKV---------------~nLRILaCG 424 (1004)
T KOG0782|consen 361 SSPLMKPLLVFVNPKSGGNQGSKALQTFCWYLNPRQVFDLSQLGPKFALE-MYRKV---------------VNLRILACG 424 (1004)
T ss_pred CCCCCCceEEEecCCCCCcchHHHHHHHHHhcChhhheehhccCcHHHHH-HHHhc---------------cceEEEEec
Confidence 34568999999999999999999999999999999999999999999997 77765 258999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCC
Q 009462 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 236 (534)
Q Consensus 157 GDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~ 236 (534)
|||||+|+|+.|+++++...||+||+|+||||||||.|+||.+|. ++.+.++|..|.++.++.+|+|.+.+++..
T Consensus 425 GDGTVGWiLStLD~L~l~p~PPvailPLGTGNDLARtlnWGGgyt---DEPvSkil~~ve~gtvVqLDRW~lhvEpNp-- 499 (1004)
T KOG0782|consen 425 GDGTVGWILSTLDNLNLPPYPPVAILPLGTGNDLARTLNWGGGYT---DEPVSKILQAVEHGTVVQLDRWRLHVEPNP-- 499 (1004)
T ss_pred CCCceeehhhhhhhcCCCCCCCeeEeecCCcchHHHhcccCCCcC---cchHHHHHHHHhcCcEEeeeeeeecccCCC--
Confidence 999999999999999999999999999999999999999997553 468999999999999999999999876432
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHH
Q 009462 237 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 316 (534)
Q Consensus 237 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 316 (534)
+|.+. |...+. .+.+.. ..|+||||+||||.|+++||+.|+.+|++|+||++||+.|+-.
T Consensus 500 --~~~pE---e~ddG~--------~~~LPL-------~VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrNkmfYaG~ 559 (1004)
T KOG0782|consen 500 --SCNPE---EEDDGM--------QSALPL-------TVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGL 559 (1004)
T ss_pred --CCChh---hhcccc--------hhccch-------hHhhccccccccceEEEEeccccccCHHHHHHHHhhhhhhcch
Confidence 12111 000000 011111 1599999999999999999999999999999999999999999
Q ss_pred HHhhhccccccCCCCCcCCcceEEEEEEecCCc---EEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCC
Q 009462 317 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQ---WEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPP 393 (534)
Q Consensus 317 g~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~---~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a 393 (534)
++.. ++.+++|++.++++|.+ ||. .+.-+| +...|+++|||+|.+|..+|+.|.+. -.|.++
T Consensus 560 afsD------fl~rSskDL~khi~vvC---DG~DlTPkIqeL--K~qCivFlNIprYcaGTmPWG~pgdh----hDfePq 624 (1004)
T KOG0782|consen 560 AFSD------FLKRSSKDLCKHITVVC---DGVDLTPKIQEL--KLQCIVFLNIPRYCAGTMPWGEPGDH----HDFEPQ 624 (1004)
T ss_pred hHHH------HHhhhhHHhhhheEEEe---cCccCChhhhhc--ccceEEEecchhhhcCccCCCCCCcc----ccCCcc
Confidence 9998 67778899999888888 664 111123 46799999999999999999987432 367889
Q ss_pred cccCCcEEEEEecchhHHHHHHccCCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceee
Q 009462 394 YVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 473 (534)
Q Consensus 394 ~~dDGlLEVv~v~~~~~~~~l~~~~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~ 473 (534)
+.|||++||+||+-.+ ++.|++ .+++-|++||++|++.+.+ .+||||||||.... |..|+|...+|++
T Consensus 625 rhdDGyvEViGFTmas-LAALQv-GGhGERl~QCreV~l~T~K----aIPmQVDGEPC~LA------ps~Iri~lrnqa~ 692 (1004)
T KOG0782|consen 625 RHDDGYVEVIGFTMAS-LAALQV-GGHGERLAQCREVRLITNK----AIPMQVDGEPCLLA------PSIIRIGLRNQAP 692 (1004)
T ss_pred ccCCceEEEEeeeHHH-HHHHhh-cCcchhhhhceeEEEEecc----ccceeecCcchhcc------hhheEEeecccch
Confidence 9999999999998764 344343 5788999999999998887 69999999999875 7899999989999
Q ss_pred EEeCCCCCc
Q 009462 474 MLATPCCRS 482 (534)
Q Consensus 474 mL~~~~~~~ 482 (534)
|+.+.--+.
T Consensus 693 Mvqk~KRR~ 701 (1004)
T KOG0782|consen 693 MVQKEKRRG 701 (1004)
T ss_pred HHHHHhhcc
Confidence 997765433
No 3
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-64 Score=543.80 Aligned_cols=418 Identities=30% Similarity=0.492 Sum_probs=324.6
Q ss_pred ccccCcccccCceeecCC-c------ccccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHH
Q 009462 54 SKILNNYYIPNYILVSGS-E------VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLH 126 (534)
Q Consensus 54 ~~~~~~~~ip~~~~~~~~-~------~~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~ 126 (534)
.+.-+--.|||-.+.... . .......+.+|++||+|.|||..+|.+++++|+++||+.|||||..++|.-+|.
T Consensus 160 ~~~~~~svi~ptal~~~~~dg~~v~~~~a~~~~~~spllv~insksgd~qg~~~lrkfkq~lnp~qVfdll~~gp~~gL~ 239 (1099)
T KOG1170|consen 160 LGHSALSVIPPTALKEVTPDGTAVFWEEAYGGPCGSPLLVFINSKSGDSQGQRFLRKFKQILNPIQVFDLIAGGPDFGLT 239 (1099)
T ss_pred cccccccccChhhhcccCCCcceeehhhhcCCCCCCceeEeecccCCCchhHHHHHhhhhhcCHHHHHHHHccCcchhhh
Confidence 444455567766443221 1 124445667999999999999999999999999999999999999999999886
Q ss_pred HHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchH
Q 009462 127 QLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQ 206 (534)
Q Consensus 127 ~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~ 206 (534)
++.++ ..+||+||||||+|+||+..++.++++.++.+|++|+|||||+||+||||..++. ..
T Consensus 240 -~f~~~---------------d~friLvcggdGsv~wvls~~ds~~lh~kcql~vlplgtgndlarvlgwg~a~~d--dt 301 (1099)
T KOG1170|consen 240 -FFSHF---------------ESFRILVCGGDGSVGWVLSAIDRLNLHSKCQLAVLPLGTGNDLARVLGWGHAFYD--DT 301 (1099)
T ss_pred -hhhcc---------------cceEEEEecCCCCCcchHHHHHhccchhhcccccccCCChHHHHHHhcccccCch--hh
Confidence 66654 3689999999999999999999999999999999999999999999999975433 33
Q ss_pred HHHHHHHHHHcCceeeEeEEEEeeeccC----------------------------------------------------
Q 009462 207 AVLSFLEQVKNAKEMQIDSWHILMRMKA---------------------------------------------------- 234 (534)
Q Consensus 207 ~~~~~L~~I~~a~~~~iD~w~V~~~~~~---------------------------------------------------- 234 (534)
.+.++++.+.++.++++|+|.|...-..
T Consensus 302 ~~p~il~~~eRastkmldrwsvm~~e~~~~~~~~~~~~~v~~~~~~~e~~~i~~~e~q~~t~l~kiL~s~~~t~~i~~~~ 381 (1099)
T KOG1170|consen 302 LLPQILRTMERASTKMLDRWSVMAIEGPQADAVRRYIEKVETFLEAEETWDIIHAENQLATTLRKILHSVSHTYSILENN 381 (1099)
T ss_pred ccHHHHHHHHhhhhhhhhcchhhhhhccccchHHHHHHHHHHhcccchhhhhhhhhhhhhhhHHhhhccccchhhhhhhc
Confidence 4568999999999999999997511000
Q ss_pred ----------------------------------------------------------------------------CCCC
Q 009462 235 ----------------------------------------------------------------------------PKEG 238 (534)
Q Consensus 235 ----------------------------------------------------------------------------~~~g 238 (534)
+..|
T Consensus 382 ~~c~~~~~f~~k~~ka~~s~~~nl~~s~a~~~k~spa~e~~~~~~~~~~~es~assv~~~~t~~~~~~l~~gt~~~~~~g 461 (1099)
T KOG1170|consen 382 TLCTKREDFVKKRSKATPSVLSNLSSSSACSPKCSPAGEDLPQLFEILHSESSASSVLTALSARTYDELEIGTVHPPTPG 461 (1099)
T ss_pred cccchHHHHHHHHhhcccchhccCCchhhccccCCccccchhHHHHHhhhhhhhhhccCCCchhhhhhhhhccccCCCCC
Confidence 0000
Q ss_pred C---------CC---CCCC--CCCC---cccc------------cc----------------------------------
Q 009462 239 S---------FD---PIAP--LELP---HSLH------------AF---------------------------------- 255 (534)
Q Consensus 239 ~---------~~---~i~~--~~~~---~~~~------------~~---------------------------------- 255 (534)
+ ++ +|.. .+|+ ++++ ++
T Consensus 462 ~t~~p~~~~~~~~~~~i~~~r~eL~~kans~kks~s~~i~~te~a~De~~~~~~~~L~eseekm~~ks~~~~~~se~d~~ 541 (1099)
T KOG1170|consen 462 ATREPSTAYDDDEENEIVENRKELDQKANSLKKSVSTIIDITEGAPDEPRIYSDTTLNESEEKMKSKSLHPICSSEDDMK 541 (1099)
T ss_pred ccCCCCccccchhhhhhcccHHHHhHHhhhhhccHHHhHHHhhcCCCcccccchhhhhhhHhhhhhccCCCcccCccccc
Confidence 0 00 0000 0000 0000 00
Q ss_pred --------------ccc-------------c-----cccccc--------------cCCcc-e----e--ccceeEEeec
Q 009462 256 --------------HRV-------------S-----QKDKLN--------------VEGHH-T----F--RGGFWNYFSM 282 (534)
Q Consensus 256 --------------~~~-------------~-----~~~~~~--------------~~~~~-~----~--~~~F~NyfsI 282 (534)
.|. + ..|.++ +...| . | ...|+|||||
T Consensus 542 ~~~~s~~~~~~spl~rl~s~~~ls~ggs~~s~~~~~d~dtl~al~~~~~~p~~d~g~seS~L~sa~~y~EkCVMNNYFGI 621 (1099)
T KOG1170|consen 542 QHSDSSLYADYSPLERLSSGGGLSAGGSTLSPARASDSDTLSALKERKRTPGSDLGLSESHLRSAGQYKEKCVMNNYFGI 621 (1099)
T ss_pred cccchhhccccchhhccCCCCCcccCccccCcccccccchhhhhhccccCCcccccccccccccccchhhhhhhcccccc
Confidence 000 0 001111 00000 0 1 2469999999
Q ss_pred chhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEE
Q 009462 283 GMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSI 362 (534)
Q Consensus 283 G~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~i 362 (534)
|+||.|++.||+.|++||+++.||.+|++||++.|.|+ |+|++|||+.++++|++ ||+ ++++| ++++|
T Consensus 622 GlDAKISLDFhnKReEhPeKcrSR~kn~MWYGvLGtKe------LLhrTyrnLEQRV~LEC---DG~--~i~lP-~LQGI 689 (1099)
T KOG1170|consen 622 GLDAKISLDFHNKREEHPEKCRSRSKNFMWYGVLGTKE------LLHRTYRNLEQRVKLEC---DGV--PIDLP-SLQGI 689 (1099)
T ss_pred ccceeEeeecccccccChHHHhHHhhhcchhhhcchHH------HHHHHHHhHHHHeeeec---CCc--ccCCc-cccee
Confidence 99999999999999999999999999999999999999 89999999999888887 898 89999 99999
Q ss_pred EEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHHHHHHccCCCccEEEeecEEEEEEccCCCccc
Q 009462 363 VCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFEKGAADHT 442 (534)
Q Consensus 363 vilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~~~l~~~~~~~~rl~Q~~~v~I~~~~~~~~~~ 442 (534)
||+|||||.||.|+|+.++ .++.|.+|++||+.||||++-++.+++...+.+.++.||+||++|+|.+.. ++++
T Consensus 690 viLNIpSyaGGtNFWGsnk----~dd~f~apSfDDriLEVVAvFGsvqMA~SRvI~LqhHRIAQCr~V~I~IlG--DE~I 763 (1099)
T KOG1170|consen 690 VILNIPSYAGGTNFWGSNK----DDDEFTAPSFDDRILEVVAVFGSVQMATSRVIRLQHHRIAQCRHVRIVILG--DEGI 763 (1099)
T ss_pred EEEecccccCcccccCCCC----CCCcccCCCcccceeEEeeeehhHHHHHHHHHHhhhhhhhhceEEEEEEec--CCCC
Confidence 9999999999999999764 468999999999999999999999988877777888999999999999987 5689
Q ss_pred eeeecCCcCCCCCCCCCCcEEEEEEeCceeeEEeCC----------CCCcCcccCCCCCCCCCCccCCccccCcchhHHH
Q 009462 443 FMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATP----------CCRSRSINDAPSPASIIDEDCESIEDESSEDWEE 512 (534)
Q Consensus 443 ~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (534)
|||||||+|.|| |..|.|.|++.++||+++ +-|++.....++|... ..+..++||. .+
T Consensus 764 PVQvDGEaWlQP------PG~irIvHKNRaQmL~Rnr~fE~tLKsWeeKq~~~s~~~q~~~~---~~e~as~ed~---~q 831 (1099)
T KOG1170|consen 764 PVQVDGEAWLQP------PGIIRIVHKNRAQMLARNRVFEATLKSWEEKQEKASTTPQPSTP---TAEGASTEDI---IQ 831 (1099)
T ss_pred ceeecCccccCC------CceeeeehhhhHHHhhcchHHHHHHHHHHHHhhcccCCCCCCCc---ccccCChhHH---HH
Confidence 999999999998 799999999999999998 4566666666666542 2355566665 66
Q ss_pred hhhcccc
Q 009462 513 RRKFGAA 519 (534)
Q Consensus 513 ~~~f~~~ 519 (534)
+..|+.+
T Consensus 832 ~~~~~~~ 838 (1099)
T KOG1170|consen 832 MLTRARE 838 (1099)
T ss_pred HHHHHHH
Confidence 6766654
No 4
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=1.4e-41 Score=346.67 Aligned_cols=274 Identities=20% Similarity=0.256 Sum_probs=209.4
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009462 85 LVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (534)
Q Consensus 85 lvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL-~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~ 162 (534)
+||+||.||++. ..+..+++.|..... +.+ ....++++.+ +.+.+. .+...|||+|||||||
T Consensus 1 ~~I~Np~sg~~~--~~~~~i~~~l~~~g~~~~~~~t~~~~~a~~-~~~~~~-------------~~~d~iiv~GGDGTv~ 64 (287)
T PRK13057 1 LLLVNRHARSGR--AALAAARAALEAAGLELVEPPAEDPDDLSE-VIEAYA-------------DGVDLVIVGGGDGTLN 64 (287)
T ss_pred CEEECCCCCCcc--hhHHHHHHHHHHcCCeEEEEecCCHHHHHH-HHHHHH-------------cCCCEEEEECchHHHH
Confidence 479999999766 467788888865442 333 2234555433 222211 2346899999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCCCCC
Q 009462 163 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDP 242 (534)
Q Consensus 163 ~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~~~~ 242 (534)
+|+++|.. .++|||+||+||||||||+||++. ++.++++.+..++++.+|+++++-
T Consensus 65 ~v~~~l~~----~~~~lgiiP~GT~Ndfar~Lg~~~--------~~~~a~~~i~~~~~~~vD~g~~~~------------ 120 (287)
T PRK13057 65 AAAPALVE----TGLPLGILPLGTANDLARTLGIPL--------DLEAAARVIATGQVRRIDLGWVNG------------ 120 (287)
T ss_pred HHHHHHhc----CCCcEEEECCCCccHHHHHcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC------------
Confidence 99999975 468999999999999999999985 578889999999999999998740
Q ss_pred CCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhhhc
Q 009462 243 IAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGW 322 (534)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~ 322 (534)
++|+|++|+|+||.|++.++..++ +..++++|++.+++.
T Consensus 121 -------------------------------~~f~n~~g~G~da~v~~~~~~~~k--------~~~G~~aY~~~~~~~-- 159 (287)
T PRK13057 121 -------------------------------HYFFNVASLGLSAELARRLTKELK--------RRWGTLGYAIAALRV-- 159 (287)
T ss_pred -------------------------------EEEEEEEecCccHHHHHHhhHHhh--------ccCChhHHHHHHHHH--
Confidence 269999999999999998875543 345899999999998
Q ss_pred cccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEE
Q 009462 323 FLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEI 402 (534)
Q Consensus 323 f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEV 402 (534)
+++ ++.+ .++|++ ||+ ..+. +...++|+|.++||||+.++|. ++++||+|||
T Consensus 160 ----l~~--~~~~--~~~l~~---d~~--~~~~--~~~~~~v~N~~~~gg~~~~~p~-------------a~~~DG~ldv 211 (287)
T PRK13057 160 ----LRR--SRPF--TAEIEH---DGR--TERV--KTLQVAVGNGRYYGGGMTVAHD-------------ATIDDGRLDL 211 (287)
T ss_pred ----Hhh--CCCe--EEEEEE---CCE--EEEE--EEEEEEEecCcccCCCcccCCC-------------CCCCCceEEE
Confidence 542 2232 456666 665 3333 4567889999999999998874 7899999999
Q ss_pred EEecchhH--HHHHH--cc-----CCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceee
Q 009462 403 VGFRDAWH--GLVLL--AP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 473 (534)
Q Consensus 403 v~v~~~~~--~~~l~--~~-----~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~ 473 (534)
++++.... ++.++ +. ..+.++..++++++|++.+ ++++|+|||.+... |++|+|.+ +.++
T Consensus 212 ~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~~----~~~~~~DGE~~~~~------p~~i~v~p-~al~ 280 (287)
T PRK13057 212 YSLEVAHWWRLLALLPALRRGRHGEWPDVRAFRTTELELRTRK----PRPINTDGELTTYT------PAHFRVLP-KALR 280 (287)
T ss_pred EEecCCCHHHHHHHHHHHhcCCccCCCcEEEEEeeEEEEEeCC----CcEEeeCCccCCCC------CEEEEEEC-CeEE
Confidence 99987643 22221 11 2345889999999999876 78999999999764 79999997 5999
Q ss_pred EEeCC
Q 009462 474 MLATP 478 (534)
Q Consensus 474 mL~~~ 478 (534)
++++.
T Consensus 281 v~~p~ 285 (287)
T PRK13057 281 VLAPP 285 (287)
T ss_pred EEcCC
Confidence 99864
No 5
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=6.5e-41 Score=343.33 Aligned_cols=278 Identities=19% Similarity=0.187 Sum_probs=208.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--V--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++||+||.||++++.+.+..+++.|.... + +.++. +.. .+...+.. .+....|||+||
T Consensus 2 ~~~~~I~NP~aG~g~~~~~~~~i~~~l~~~g~~~~~~~~~~--~~~-~~~~~~~~-------------~~~~d~vi~~GG 65 (295)
T PRK13059 2 KKVKFIYNPYSGENAIISELDKVIRIHQEKGYLVVPYRISL--EYD-LKNAFKDI-------------DESYKYILIAGG 65 (295)
T ss_pred cEEEEEECCcccchhHHHHHHHHHHHHHHCCcEEEEEEccC--cch-HHHHHHHh-------------hcCCCEEEEECC
Confidence 5789999999999988888888888886543 2 22221 222 22111110 123457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~ 237 (534)
|||||+|+++|.+. ..++||||||+||||||||+||++. ++.++++.|..++++.+|+++++-
T Consensus 66 DGTv~evv~gl~~~--~~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~v~~------- 128 (295)
T PRK13059 66 DGTVDNVVNAMKKL--NIDLPIGILPVGTANDFAKFLGMPT--------DIGEACEQILKSKPKKVDLGKIND------- 128 (295)
T ss_pred ccHHHHHHHHHHhc--CCCCcEEEECCCCHhHHHHHhCCCC--------CHHHHHHHHHhCCcEEeeEEEECC-------
Confidence 99999999999853 2468999999999999999999985 688899999999999999998741
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHH
Q 009462 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (534)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (534)
++|+|++|+|+||+|++..+...+ +..++++|+..+
T Consensus 129 ------------------------------------~~f~n~~~~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~ 164 (295)
T PRK13059 129 ------------------------------------KYFINVASTGLFTDVSQKTDVNLK--------NTIGKLAYYLKG 164 (295)
T ss_pred ------------------------------------EEEEEEEeeeechhhhhhccHHHh--------hCcchHHHHHHH
Confidence 269999999999999988764322 345899999999
Q ss_pred HhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccC
Q 009462 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (534)
Q Consensus 318 ~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (534)
++. ++. ++. ..++|++ ||+ .++. +...++|+|.+++| |+.++| .++++|
T Consensus 165 ~~~------l~~--~~~--~~~~i~~---d~~--~~~~--~~~~~~v~N~~~~G-g~~~~p-------------~a~~~D 213 (295)
T PRK13059 165 LEE------LPN--FRK--LKVKVTS---EEV--NFDG--DMYLMLVFNGQTAG-NFNLAY-------------KAEVDD 213 (295)
T ss_pred HHH------Hhc--CCC--eeEEEEE---CCE--EEEe--eEEEEEEEcCcccc-CcccCC-------------cccCCC
Confidence 998 432 222 2356666 665 3432 56678899999877 567766 378999
Q ss_pred CcEEEEEecchhHH--HHHH--ccC-----CCc-cEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEE
Q 009462 398 GLLEIVGFRDAWHG--LVLL--APN-----GHG-TRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 467 (534)
Q Consensus 398 GlLEVv~v~~~~~~--~~l~--~~~-----~~~-~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~ 467 (534)
|+|||+++++...+ +.++ ... ... +++.++++++|+..+ ++++|+|||+.... |++|++.
T Consensus 214 G~Ldv~i~~~~~~~~~l~~~~~~~~G~~~~~~~~v~~~~~~~i~i~~~~----~~~~~~DGE~~~~~------p~~i~v~ 283 (295)
T PRK13059 214 GLLDVIIIKACPIIDLIPLFIKVLKGEHLEDVNGLIYFKTDKLEIESNE----EIVTDIDGERGPDF------PLNIECI 283 (295)
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHcCCccCCCccEEEEEeeEEEEEeCC----CceEEeCCCcCCCC------cEEEEEe
Confidence 99999999987542 2221 111 234 788999999999865 79999999998763 8999999
Q ss_pred eCceeeEEeCC
Q 009462 468 HLRQVNMLATP 478 (534)
Q Consensus 468 ~~~~v~mL~~~ 478 (534)
+ ++++++++.
T Consensus 284 p-~al~v~~p~ 293 (295)
T PRK13059 284 K-GGLKVLGIL 293 (295)
T ss_pred c-CeeEEEecC
Confidence 7 599999964
No 6
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=3.9e-40 Score=337.08 Aligned_cols=283 Identities=17% Similarity=0.155 Sum_probs=204.2
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL-~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGT 160 (534)
.+++|+||+||..+ .+..+.+.|....+ +.+ ....++++.+ +.+.+. .++...|||||||||
T Consensus 1 ~~~~I~N~~~~~~~---~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDGT 64 (293)
T TIGR03702 1 KALLILNGKQADNE---DVREAVGDLRDEGIQLHVRVTWEKGDAQR-YVAEAL------------ALGVSTVIAGGGDGT 64 (293)
T ss_pred CEEEEEeCCccchh---HHHHHHHHHHHCCCeEEEEEecCCCCHHH-HHHHHH------------HcCCCEEEEEcCChH
Confidence 37899999987332 34455555654432 332 2234555543 322211 123458999999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCCC
Q 009462 161 ASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSF 240 (534)
Q Consensus 161 V~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~~ 240 (534)
||+|+++|........+|||+||+||||||||+||++. +++++++.+..++++++|+++++-
T Consensus 65 i~ev~ngl~~~~~~~~~~lgiiP~GTgNdfAr~l~ip~--------~~~~a~~~i~~g~~~~iDlg~v~~---------- 126 (293)
T TIGR03702 65 LREVATALAQIRDDAAPALGLLPLGTANDFATAAGIPL--------EPAKALKLALNGAAQPIDLARVNG---------- 126 (293)
T ss_pred HHHHHHHHHhhCCCCCCcEEEEcCCchhHHHHhcCCCC--------CHHHHHHHHHhCCceeeeEEEECC----------
Confidence 99999999753222357899999999999999999985 578889999999999999998740
Q ss_pred CCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhh
Q 009462 241 DPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQ 320 (534)
Q Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~ 320 (534)
.++|+|.+|+|+||+|+...+...+ +..++++|+..+++.
T Consensus 127 --------------------------------~~~f~n~~~~G~da~v~~~~~~~~k--------~~~G~~aY~~~~l~~ 166 (293)
T TIGR03702 127 --------------------------------KHYFLNMATGGFGTRVTTETSEKLK--------KALGGAAYLITGLTR 166 (293)
T ss_pred --------------------------------ccEEEEEeecccchHhhhhhhHHHH--------hccchHHHHHHHHHH
Confidence 0269999999999999988875433 356899999999988
Q ss_pred hccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcE
Q 009462 321 GWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLL 400 (534)
Q Consensus 321 ~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlL 400 (534)
++. .+.+ .++++. |+. .+. .+...++|+|+++||||+.+.|. +.++||+|
T Consensus 167 ------l~~--~~~~--~~~i~~---~~~--~~~--~~~~~~~v~N~~~~GGg~~i~P~-------------A~~~DG~L 216 (293)
T TIGR03702 167 ------FSE--LTAA--SCEFRG---PDF--HWE--GDFLALGIGNGRQAGGGQVLCPD-------------ALINDGLL 216 (293)
T ss_pred ------Hhh--CCCe--EEEEEE---CCE--EEE--eeEEEEEEECCCcCCCCceeCCC-------------CccCCceE
Confidence 431 2222 234444 453 222 25678889999999999999874 78999999
Q ss_pred EEEEecchhHHHHHH--ccCC---CccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeEE
Q 009462 401 EIVGFRDAWHGLVLL--APNG---HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNML 475 (534)
Q Consensus 401 EVv~v~~~~~~~~l~--~~~~---~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL 475 (534)
||++++..+.++.++ ...+ ..+...++++++|+..+ ++++|+|||++... |++|+|.+ ++++++
T Consensus 217 dv~~v~~~~~~~~~l~~~~~g~~~~~~~~~~~~~i~i~~~~----~~~~~vDGE~~~~~------p~~i~v~p-~al~v~ 285 (293)
T TIGR03702 217 DVRILPAPELLPATLSTLFGGDKNPEFVRARLPWLEIEAPQ----PLTFNLDGEPLSGR------HFRIEVLP-GALRCH 285 (293)
T ss_pred EEEEeCCHHHHHHHHHHHhcCCCCCcEEEEEcCEEEEEeCC----CcEEEECCCcCCCc------eEEEEEEc-CeEEEE
Confidence 999998844332221 1122 23455677889998865 79999999999764 89999997 599999
Q ss_pred eCCCC
Q 009462 476 ATPCC 480 (534)
Q Consensus 476 ~~~~~ 480 (534)
++..|
T Consensus 286 ~p~~~ 290 (293)
T TIGR03702 286 LPPGC 290 (293)
T ss_pred cCCCC
Confidence 97653
No 7
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=3.5e-40 Score=339.12 Aligned_cols=287 Identities=20% Similarity=0.156 Sum_probs=214.3
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL-~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
.+++++||+||.||++.+.+.+..+.+.|..... +.+ ....++++.+ +.+.+. ......|||+||
T Consensus 7 ~~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~~~~~~-~a~~~~------------~~~~d~vvv~GG 73 (306)
T PRK11914 7 EIGKVTVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDAHDARH-LVAAAL------------AKGTDALVVVGG 73 (306)
T ss_pred CCceEEEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCHHHHHH-HHHHHH------------hcCCCEEEEECC
Confidence 3588999999999999998888888888865432 322 2234555443 222211 123457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~ 237 (534)
|||||+|++++.. .++|||+||+||||||||+||++.+ +++++++.+.+++++.+|+++|+...
T Consensus 74 DGTi~evv~~l~~----~~~~lgiiP~GT~NdfAr~lg~~~~-------~~~~a~~~i~~g~~~~iDlg~v~~~~----- 137 (306)
T PRK11914 74 DGVISNALQVLAG----TDIPLGIIPAGTGNDHAREFGIPTG-------DPEAAADVIVDGWTETVDLGRIQDDD----- 137 (306)
T ss_pred chHHHHHhHHhcc----CCCcEEEEeCCCcchhHHHcCCCCC-------CHHHHHHHHHcCCceEEEEEEEecCC-----
Confidence 9999999999964 4689999999999999999999841 57788899999999999999986210
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHH
Q 009462 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (534)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (534)
+. .++|+|++|+|+||.|+...++.|+ ..++++|.+.+
T Consensus 138 ------------------------------~~---~~~f~n~~~~G~~a~v~~~~~~~k~---------~~G~~aY~~~~ 175 (306)
T PRK11914 138 ------------------------------GI---VKWFGTVAATGFDSLVTDRANRMRW---------PHGRMRYNLAM 175 (306)
T ss_pred ------------------------------CC---cEEEEEEEeeehHHHHHHHHHhccc---------cCCchhhHHHH
Confidence 00 1379999999999999988764332 24889999999
Q ss_pred HhhhccccccCCCCCcCCcceEEEEEEecCC-cEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCccc
Q 009462 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQG-QWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 396 (534)
Q Consensus 318 ~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG-~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~d 396 (534)
++. +++ .+.+ .++|++ || + .++ .++..++|+|.++||||+.++|. ++++
T Consensus 176 l~~------l~~--~~~~--~~~i~~---dg~~--~~~--~~~~~~~v~N~~~~GG~~~~~p~-------------a~~~ 225 (306)
T PRK11914 176 LAE------LSK--LRPL--PFRLVL---DGTE--EIV--TDLTLAAFGNTRSYGGGMLICPN-------------ADHT 225 (306)
T ss_pred HHH------HHh--cCCC--cEEEEE---eCCe--EEE--eeEEEEEEeCcccccCCceeCCC-------------CcCC
Confidence 988 432 2232 467777 55 3 233 25678889999999999999874 7899
Q ss_pred CCcEEEEEecchhHH--HHHH--ccC-----CCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEE
Q 009462 397 DGLLEIVGFRDAWHG--LVLL--APN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 467 (534)
Q Consensus 397 DGlLEVv~v~~~~~~--~~l~--~~~-----~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~ 467 (534)
||+|||++++..... +.++ +.. ...+++.++++++|+.. ++++++|||+.... |++|++.
T Consensus 226 DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~i~i~~~-----~~~~~~DGE~~~~~------p~~i~v~ 294 (306)
T PRK11914 226 DGLLDITMVQSASRTRLLRLFPTVFKGTHVELDEVSTARAKTVHVECP-----GINAYADGDFACPL------PAEISAV 294 (306)
T ss_pred CCcEEEEEEecCCHHHHHHHHHHhcCCcccCCCcEEEEEeEEEEEEcC-----CcceecCCCcCCCC------ceEEEEE
Confidence 999999999876542 2221 122 23478889999999874 37899999998753 7999999
Q ss_pred eCceeeEEeCCC
Q 009462 468 HLRQVNMLATPC 479 (534)
Q Consensus 468 ~~~~v~mL~~~~ 479 (534)
+ +.++++++.+
T Consensus 295 p-~al~v~vp~~ 305 (306)
T PRK11914 295 P-GALQILRPRP 305 (306)
T ss_pred c-CeEEEECCCC
Confidence 7 5999998653
No 8
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=8.1e-40 Score=335.77 Aligned_cols=286 Identities=18% Similarity=0.165 Sum_probs=208.8
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
+++.++||+||+|++ .+.+..+.+.|....+ +++.. ..++++.+ +.+... ..+...|||+||
T Consensus 2 ~~~~~~~i~N~~~~~---~~~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GG 65 (300)
T PRK13054 2 TFPKSLLILNGKSAG---NEELREAVGLLREEGHTLHVRVTWEKGDAAR-YVEEAL------------ALGVATVIAGGG 65 (300)
T ss_pred CCceEEEEECCCccc---hHHHHHHHHHHHHcCCEEEEEEecCCCcHHH-HHHHHH------------HcCCCEEEEECC
Confidence 467899999999863 3444555555654432 33322 34555443 222211 123457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~ 237 (534)
|||||+|++++.......++|||+||+||||||||+||++. ++.++++.|.+++++.+|+++++-
T Consensus 66 DGTl~evv~~l~~~~~~~~~~lgiiP~GTgNdfar~lgi~~--------~~~~a~~~i~~g~~~~iDlg~v~~------- 130 (300)
T PRK13054 66 DGTINEVATALAQLEGDARPALGILPLGTANDFATAAGIPL--------EPDKALKLAIEGRAQPIDLARVND------- 130 (300)
T ss_pred ccHHHHHHHHHHhhccCCCCcEEEEeCCcHhHHHHhcCCCC--------CHHHHHHHHHhCCceEEEEEEEcC-------
Confidence 99999999999753223468999999999999999999985 578889999999999999998741
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHH
Q 009462 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (534)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (534)
+++|+|.+|+|+||+|++..++..+ +..++++|+..+
T Consensus 131 -----------------------------------~~~f~n~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~ 167 (300)
T PRK13054 131 -----------------------------------RTYFINMATGGFGTRVTTETPEKLK--------AALGGVAYLIHG 167 (300)
T ss_pred -----------------------------------ceEEEEEeecchhHHHHHhhHHHHH--------hccchHHHHHHH
Confidence 0169999999999999988764322 346899999999
Q ss_pred HhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccC
Q 009462 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (534)
Q Consensus 318 ~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (534)
++. +++ ++.+ .++++. ||+ ..+. ....++|+|.+++|||+.++|. +.++|
T Consensus 168 l~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~ggg~~~~p~-------------a~~~D 217 (300)
T PRK13054 168 LMR------MDT--LKPD--RCEIRG---PDF--HWQG--DALVIGIGNGRQAGGGQQLCPE-------------ALIND 217 (300)
T ss_pred HHH------Hhh--CCCe--EEEEEe---CCc--EEEe--eEEEEEEECCCcCCCCcccCCC-------------CcCCC
Confidence 988 432 2332 345555 554 2332 5678889999999999998874 78999
Q ss_pred CcEEEEEecchhHHHHH----Hcc---CCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCc
Q 009462 398 GLLEIVGFRDAWHGLVL----LAP---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLR 470 (534)
Q Consensus 398 GlLEVv~v~~~~~~~~l----~~~---~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~ 470 (534)
|+|||+.+++.+..+.+ +.+ ....++..++++++|+..+ ++++|+|||++... |++|+|.+ +
T Consensus 218 G~ldv~~~~~~~~~l~~l~~~~~g~~~~~~~v~~~~~~~v~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p-~ 286 (300)
T PRK13054 218 GLLDLRILPAPQELLPTLLSTLTGGSEDNPNIIRARLPWLEIQAPH----ELTFNLDGEPLSGR------HFRIEVLP-A 286 (300)
T ss_pred CeEEEEEECCHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEcCC----CCEEEeCCCcCCCc------cEEEEEEc-C
Confidence 99999999982222221 111 1234778899999999765 79999999998763 89999997 5
Q ss_pred eeeEEeCCCC
Q 009462 471 QVNMLATPCC 480 (534)
Q Consensus 471 ~v~mL~~~~~ 480 (534)
.+++|++.+|
T Consensus 287 al~vl~p~~~ 296 (300)
T PRK13054 287 ALRCRLPPDC 296 (300)
T ss_pred eeEEEeCCCC
Confidence 9999997654
No 9
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=1e-39 Score=339.97 Aligned_cols=286 Identities=16% Similarity=0.167 Sum_probs=214.2
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEE--eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL--GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL--~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
+++++||+||+||++++.+.+..+++.|....+ +.+ +...+.++.+ +.+.+. ..+...|||+||
T Consensus 2 ~~r~~iI~NP~sG~~~~~~~~~~i~~~l~~~g~~~~i~~t~~~~~~a~~-~~~~~~------------~~~~d~vvv~GG 68 (334)
T PRK13055 2 QKRARLIYNPTSGQEIMKKNVADILDILEQAGYETSAFQTTPEPNSAKN-EAKRAA------------EAGFDLIIAAGG 68 (334)
T ss_pred CceEEEEECCCCCchhHHHHHHHHHHHHHHcCCeEEEEEeecCCccHHH-HHHHHh------------hcCCCEEEEECC
Confidence 368999999999999988999999998876543 332 3223444433 222211 123458999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~ 237 (534)
|||||+|+++|... ...++|||||+||||||||+||++.+ ++.++++.+.+++++++|+++++-
T Consensus 69 DGTl~evvngl~~~--~~~~~LgiiP~GTgNdfAr~Lgi~~~-------~~~~a~~~l~~g~~~~vD~g~v~~------- 132 (334)
T PRK13055 69 DGTINEVVNGIAPL--EKRPKMAIIPAGTTNDYARALKIPRD-------NPVEAAKVILKNQTIKMDIGRANE------- 132 (334)
T ss_pred CCHHHHHHHHHhhc--CCCCcEEEECCCchhHHHHHcCCCCc-------CHHHHHHHHHcCCcEEeeEEEECC-------
Confidence 99999999999752 34689999999999999999999841 477888999999999999998730
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHH
Q 009462 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (534)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (534)
.++|+|.+|+|+||.|+...+..++ +..++++|+..+
T Consensus 133 -----------------------------------~~~F~n~ag~G~da~v~~~~~~~~k--------~~~G~laY~~~~ 169 (334)
T PRK13055 133 -----------------------------------DKYFINIAAGGSLTELTYSVPSQLK--------SMFGYLAYLAKG 169 (334)
T ss_pred -----------------------------------CcEEEEEehhccchHHHHhcCHHHH--------hhccHHHHHHHH
Confidence 0279999999999999988765443 245899999999
Q ss_pred HhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccC
Q 009462 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (534)
Q Consensus 318 ~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (534)
++. +++ ++.+ .++|++ ||+ ..+. ....++++|.+++|||+.++|. +.++|
T Consensus 170 ~~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~Gg~~~~~p~-------------a~~~D 219 (334)
T PRK13055 170 AEL------LPR--VSPV--PVRITY---DEG--VFEG--KISMFFLALTNSVGGFEQIVPD-------------AKLDD 219 (334)
T ss_pred HHH------HHh--cCCe--eEEEEE---CCE--EEEE--EEEEEEEEcCcccCCccccCCC-------------CcCCC
Confidence 988 442 2222 356666 565 2222 4567889999999999988774 78999
Q ss_pred CcEEEEEecchhH--HHHH----Hc-c---CCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEE
Q 009462 398 GLLEIVGFRDAWH--GLVL----LA-P---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 467 (534)
Q Consensus 398 GlLEVv~v~~~~~--~~~l----~~-~---~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~ 467 (534)
|+|+|++++.... ++.+ +. + ..+.+++.++++++|+... ..++++|+|||+.... |++|++.
T Consensus 220 G~ldv~i~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~~--~~~~~~~iDGE~~~~~------pv~i~v~ 291 (334)
T PRK13055 220 GKFTLIIVKTANLFELLHLMALILNGGKHIDDPRVIYIKTSKLTIEPLG--DDRLMVNLDGEYGGDA------PMTFENL 291 (334)
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCCCCcEEEEEccEEEEEeCC--CCcceEeeCCCcCCCC------cEEEEEE
Confidence 9999999998743 2222 12 2 1235788899999998753 1258999999998764 8999999
Q ss_pred eCceeeEEeC
Q 009462 468 HLRQVNMLAT 477 (534)
Q Consensus 468 ~~~~v~mL~~ 477 (534)
+ ++++|+++
T Consensus 292 p-~al~v~~p 300 (334)
T PRK13055 292 K-QHIEFFAN 300 (334)
T ss_pred c-CeEEEEeC
Confidence 7 59999984
No 10
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=1.2e-39 Score=335.16 Aligned_cols=284 Identities=17% Similarity=0.141 Sum_probs=214.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++||+||+||++.+.+.+..+.+.|....+ +++.. ..++++.+ +.+.+. .++...|||+||||
T Consensus 2 ~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GGDG 68 (304)
T PRK13337 2 KRARIIYNPTSGRELFKKNLPDVLQKLEQAGYETSAHATTGPGDATL-AAERAV------------ERKFDLVIAAGGDG 68 (304)
T ss_pred ceEEEEECCcccchhHHHHHHHHHHHHHHcCCEEEEEEecCCCCHHH-HHHHHH------------hcCCCEEEEEcCCC
Confidence 57899999999998877778887777765443 33322 24555543 222211 12345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCC
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~ 239 (534)
|||+|++++... ...+||||||.||||||||.||++. +++++++.+..+.++.+|+++++-
T Consensus 69 Tl~~vv~gl~~~--~~~~~lgiiP~GT~NdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~vn~--------- 129 (304)
T PRK13337 69 TLNEVVNGIAEK--ENRPKLGIIPVGTTNDFARALHVPR--------DIEKAADVIIEGHTVPVDIGKANN--------- 129 (304)
T ss_pred HHHHHHHHHhhC--CCCCcEEEECCcCHhHHHHHcCCCC--------CHHHHHHHHHcCCeEEEEEEEECC---------
Confidence 999999999753 3468999999999999999999985 578889999999999999998741
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHh
Q 009462 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 319 (534)
Q Consensus 240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k 319 (534)
++|+|.+|+|+||.|++..+...+ +..++++|+..+++
T Consensus 130 ----------------------------------~~fln~~g~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~~~ 167 (304)
T PRK13337 130 ----------------------------------RYFINIAGGGRLTELTYEVPSKLK--------TMLGQLAYYLKGIE 167 (304)
T ss_pred ----------------------------------EEEEeeehhhHHHHHHHhcCHHHh--------cCcccHHHHHHHHH
Confidence 269999999999999987754322 34578999999988
Q ss_pred hhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCc
Q 009462 320 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGL 399 (534)
Q Consensus 320 ~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGl 399 (534)
. +.+ .+.+ .+++++ ||+ ..+. +...++|+|.++||||+.++|. +.++||+
T Consensus 168 ~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p~-------------a~~~DG~ 217 (304)
T PRK13337 168 M------LPS--LKAT--DVRIEY---DGK--LFQG--EIMLFLLGLTNSVGGFEKLAPD-------------ASLDDGY 217 (304)
T ss_pred H------Hhh--CCCc--eEEEEE---CCe--EEEe--EEEEEEEEcCcccCCccccCCc-------------ccCCCCe
Confidence 7 432 2332 356666 675 2332 4567889999999999988774 7899999
Q ss_pred EEEEEecchhH--HHHHH--ccC-----CCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCc
Q 009462 400 LEIVGFRDAWH--GLVLL--APN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLR 470 (534)
Q Consensus 400 LEVv~v~~~~~--~~~l~--~~~-----~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~ 470 (534)
|||++++.... ++.++ +.. ...+++.++++++|+..+ ++++|+|||+.... |++|++.+ +
T Consensus 218 ldv~iv~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p-~ 286 (304)
T PRK13337 218 FDLIIVKKANLAELIHIATLALRGEHIKHPKVIYTKANRIKVSSFD----KMQLNLDGEYGGKL------PAEFENLY-R 286 (304)
T ss_pred EEEEEEcCCCHHHHHHHHHHHHcCCcCCCCcEEEEEccEEEEEcCC----CCeEEeCCCcCCCC------CEEEEEec-c
Confidence 99999988643 22221 112 235788899999999875 78999999999863 79999997 5
Q ss_pred eeeEEeCCCC
Q 009462 471 QVNMLATPCC 480 (534)
Q Consensus 471 ~v~mL~~~~~ 480 (534)
+++++++.+.
T Consensus 287 al~v~~p~~~ 296 (304)
T PRK13337 287 HIEVFVPKDQ 296 (304)
T ss_pred eEEEEecccc
Confidence 8999986544
No 11
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=7.5e-39 Score=328.40 Aligned_cols=282 Identities=18% Similarity=0.179 Sum_probs=207.7
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
+++++||+||.||++.+.+.++.++..|.+.--+++.. ..++++.+ +.+... ..+...||++||||
T Consensus 2 ~~~~~iI~NP~sG~~~~~~~~~~i~~~l~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDG 68 (300)
T PRK00861 2 TRSACLIFNPVAGQGNPEVDLALIRAILEPEMDLDIYLTTPEIGADQ-LAQEAI------------ERGAELIIASGGDG 68 (300)
T ss_pred CceEEEEECCCCCCCchhhhHHHHHHHHHhcCceEEEEccCCCCHHH-HHHHHH------------hcCCCEEEEECChH
Confidence 36799999999999988888888888887531133322 23444433 222211 12346799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCC
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~ 239 (534)
|||+|++++.. ..++||+||+||||||||+||++. +++++++.+.+++++++|+++++-
T Consensus 69 Tl~evv~~l~~----~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~iDlg~vn~--------- 127 (300)
T PRK00861 69 TLSAVAGALIG----TDIPLGIIPRGTANAFAAALGIPD--------TIEEACRTILQGKTRRVDVAYCNG--------- 127 (300)
T ss_pred HHHHHHHHHhc----CCCcEEEEcCCchhHHHHHcCCCC--------CHHHHHHHHHcCCcEEeeEEEECC---------
Confidence 99999999975 468999999999999999999985 678889999999999999998741
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHh
Q 009462 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 319 (534)
Q Consensus 240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k 319 (534)
++|+|.+|+|+||+|++..++.++ +..++++|++.+++
T Consensus 128 ----------------------------------~~fin~a~~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~l~ 165 (300)
T PRK00861 128 ----------------------------------QPMILLAGIGFEAETVEEADREAK--------NRFGILAYILSGLQ 165 (300)
T ss_pred ----------------------------------EEEEEEEeccHHHHHHHHhhHHHH--------hcccHHHHHHHHHH
Confidence 269999999999999988765443 34579999999999
Q ss_pred hhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCC-CCCCccccccccCCCCCcccCC
Q 009462 320 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDP-WGKPFRKKLRERGLTPPYVDDG 398 (534)
Q Consensus 320 ~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~-w~~~~~~~~~~~~~~~a~~dDG 398 (534)
. +++ ++.+ .+++++ ||+ .++. +...++|+|.+++++.+-. .+ .+.++||
T Consensus 166 ~------l~~--~~~~--~~~i~~---dg~--~~~~--~~~~i~v~N~~~~~~~~~~g~p-------------~a~~~DG 215 (300)
T PRK00861 166 Q------LRE--LESF--EVEIET---EDQ--IITT--NAVAVTVANAAPPTSVLAQGPG-------------AVIPDDG 215 (300)
T ss_pred H------hcc--CCCe--eEEEEE---CCe--EEEE--EEEEEEEECCCCcccccccCCC-------------CCCCCCc
Confidence 8 542 2332 356666 665 3332 4568899999855322100 11 3789999
Q ss_pred cEEEEEecchhH--HHH----HH--ccCC-----CccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEE
Q 009462 399 LLEIVGFRDAWH--GLV----LL--APNG-----HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVE 465 (534)
Q Consensus 399 lLEVv~v~~~~~--~~~----l~--~~~~-----~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~ 465 (534)
+|||++++.... ++. ++ +..+ ..+++.++++++|+..+ ++++|+|||+.... |++|+
T Consensus 216 ~ldv~iv~~~~~~~~l~~~~~l~~~~~~g~~~~~~~v~~~~~~~i~I~~~~----~~~~~~DGE~~~~~------p~~i~ 285 (300)
T PRK00861 216 LLDVTIVAPKNLAEAVAASYHLLQTALQGNPAERDDIGYLRAKQVKITTDP----PQKVVIDGEVVGTT------PIEIE 285 (300)
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCCCCceEEEEccEEEEEeCC----CeEEEECCccCCCc------eEEEE
Confidence 999999987653 221 11 1112 35788999999999876 79999999998753 89999
Q ss_pred EEeCceeeEEeCCC
Q 009462 466 ISHLRQVNMLATPC 479 (534)
Q Consensus 466 I~~~~~v~mL~~~~ 479 (534)
|.+ +.++++++.+
T Consensus 286 v~p-~al~v~~p~~ 298 (300)
T PRK00861 286 CLP-RSLKVFAPLQ 298 (300)
T ss_pred EEC-CEEEEEeCCC
Confidence 997 5999998653
No 12
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=4.3e-39 Score=328.61 Aligned_cols=279 Identities=18% Similarity=0.207 Sum_probs=209.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++||+||.||++.+.+.+..+++.|...++ +.+.. ..++++.+ +.+.. . ..+...||++||||
T Consensus 2 ~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~~~~-~~~~~---~---------~~~~d~ivv~GGDG 68 (293)
T TIGR00147 2 AEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHVRVTWEKGDAAR-YVEEA---R---------KFGVDTVIAGGGDG 68 (293)
T ss_pred ceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEEEEecCcccHHH-HHHHH---H---------hcCCCEEEEECCCC
Confidence 68899999999998888889999988866543 33322 23323322 11111 0 02345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCC
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~ 239 (534)
|+++|++++... ...|+||+||+||||||||+||++. ++.++++.+.+++.+++|+++++-
T Consensus 69 Tl~~v~~~l~~~--~~~~~lgiiP~Gt~N~~a~~l~i~~--------~~~~~~~~l~~~~~~~~Dlg~v~~--------- 129 (293)
T TIGR00147 69 TINEVVNALIQL--DDIPALGILPLGTANDFARSLGIPE--------DLDKAAKLVIAGDARAIDMGQVNK--------- 129 (293)
T ss_pred hHHHHHHHHhcC--CCCCcEEEEcCcCHHHHHHHcCCCC--------CHHHHHHHHHcCCceEEEEEEECC---------
Confidence 999999999753 2457999999999999999999985 577888999999999999998741
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccc-eeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHH
Q 009462 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGG-FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (534)
Q Consensus 240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (534)
++ |+|++|+|+||++++.++...+ +..++++|++.++
T Consensus 130 ----------------------------------~~~fln~~g~G~~a~v~~~~~~~~k--------~~~g~~~Y~~~~l 167 (293)
T TIGR00147 130 ----------------------------------QYCFINMAGGGFGTEITTETPEKLK--------AALGSLSYILSGL 167 (293)
T ss_pred ----------------------------------eEEEEEEEeechhhHhHhhCCHHHH--------hccchHHHHHHHH
Confidence 27 9999999999999988754322 3458999999999
Q ss_pred hhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCC
Q 009462 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (534)
Q Consensus 319 k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (534)
+. +. .++++ .++|++ ||+ .++. ....++++|.++||||+.++|. ++++||
T Consensus 168 ~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p~-------------a~~~DG 217 (293)
T TIGR00147 168 MR------MD--TLQPF--RCEIRG---EGE--HWQG--EAVVFLVGNGRQAGGGQKLAPD-------------ASINDG 217 (293)
T ss_pred HH------Hh--hCCCe--eEEEEE---CCe--EEEe--eEEEEEEeCCcccCCCcccCCc-------------cccCCC
Confidence 87 43 22332 356666 665 3443 4456778899999999998874 689999
Q ss_pred cEEEEEecchhH--HHHH----Hcc---CCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeC
Q 009462 399 LLEIVGFRDAWH--GLVL----LAP---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHL 469 (534)
Q Consensus 399 lLEVv~v~~~~~--~~~l----~~~---~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~ 469 (534)
+|||+++++.+. ++.+ +.+ ..+.+++.++++++|+.++ ++++|+|||++... |+.|+|.+
T Consensus 218 ~l~v~~v~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p- 286 (293)
T TIGR00147 218 LLDLRIFTNDNLLPALVLTLMSDEGKHTDNPNIIYGKASRIDIQTPH----KITFNLDGEPLGGT------PFHIEILP- 286 (293)
T ss_pred eeEEEEEcCCCHHHHHHHHHHHhcCCCCCCCcEEEEEccEEEEEcCC----CcEEEeCCCcCCCC------cEEEEEEh-
Confidence 999999987643 2221 111 1345788999999999876 68999999999874 79999997
Q ss_pred ceeeEE
Q 009462 470 RQVNML 475 (534)
Q Consensus 470 ~~v~mL 475 (534)
++++++
T Consensus 287 ~al~~~ 292 (293)
T TIGR00147 287 AHLRCR 292 (293)
T ss_pred hccEEe
Confidence 588886
No 13
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=2e-37 Score=318.44 Aligned_cols=286 Identities=23% Similarity=0.300 Sum_probs=219.3
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV---fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++.+.+|+||.||.+++.+.++.+++.|..... ...+. .++++.+.+ +.+. ......||++||
T Consensus 2 ~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~g~~~~~~~t~-~~g~a~~~a-~~a~------------~~~~D~via~GG 67 (301)
T COG1597 2 MKKALLIYNPTSGKGKAKKLLREVEELLEEAGHELSVRVTE-EAGDAIEIA-REAA------------VEGYDTVIAAGG 67 (301)
T ss_pred CceEEEEEcccccccchhhHHHHHHHHHHhcCCeEEEEEee-cCccHHHHH-HHHH------------hcCCCEEEEecC
Confidence 467899999999999999999999998876432 22232 235655422 2211 123568999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~ 237 (534)
|||||+|+|+|... ..++|||||+||+|||||+|||+. .++.++++.+.+++++.+|+++++
T Consensus 68 DGTv~evingl~~~---~~~~LgilP~GT~NdfAr~Lgip~-------~~~~~Al~~i~~g~~~~vDlg~~~-------- 129 (301)
T COG1597 68 DGTVNEVANGLAGT---DDPPLGILPGGTANDFARALGIPL-------DDIEAALELIKSGETRKVDLGQVN-------- 129 (301)
T ss_pred cchHHHHHHHHhcC---CCCceEEecCCchHHHHHHcCCCc-------hhHHHHHHHHHcCCeEEEeehhcC--------
Confidence 99999999999874 222399999999999999999996 248999999999999999998542
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHH
Q 009462 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (534)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (534)
++ .||+|.+|+|+||+|+++.+..|++ ..++++|++.+
T Consensus 130 ------------------------------~~----~~fin~a~~G~~a~~~~~~~~~~k~--------~~g~~~y~~~~ 167 (301)
T COG1597 130 ------------------------------GR----RYFINNAGIGFDAEVVAAVEEERKK--------GFGRLAYALAG 167 (301)
T ss_pred ------------------------------Cc----ceEEEEeecchhHHHHHhhcHHHHh--------ccchHHHHHHH
Confidence 10 1799999999999999999888773 45889999999
Q ss_pred HhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccC
Q 009462 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (534)
Q Consensus 318 ~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (534)
++. +. ..++. .++|++ |++ ..+. ....+++.|.+++|||..+.+ +++++|
T Consensus 168 ~~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~~~~~~~~gg~~~~~p-------------~a~~~d 217 (301)
T COG1597 168 LAV------LA--RLKPF--RIEIEY---DGK--TFEG--EALALLVFNGNSYGGGMKLAP-------------DASLDD 217 (301)
T ss_pred HHh------cc--ccCCC--cEEEEE---cCc--EEEE--EEEEEEEecCcccccccccCC-------------cCCCCC
Confidence 887 32 22332 467887 454 2222 456777888889999998876 378999
Q ss_pred CcEEEEEecchhH--HHHHH--ccCC-----CccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEe
Q 009462 398 GLLEIVGFRDAWH--GLVLL--APNG-----HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 468 (534)
Q Consensus 398 GlLEVv~v~~~~~--~~~l~--~~~~-----~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~ 468 (534)
|+|+++.++.... +..++ +..+ ..+.+.+++.++|+.+. ++++++|||+.... |++|++.+
T Consensus 218 G~l~~~i~~~~~~~~~~~l~~~~~~G~~~~~~~v~~~~~~~~~i~~~~----~~~~~~DGE~~~~~------p~~i~~~p 287 (301)
T COG1597 218 GLLDVYILKPQSLLELLALLPDLLRGKHLENPDVEYLRAKKLEITSDP----PIPVNLDGEYLGKT------PVTIEVLP 287 (301)
T ss_pred ceEEEEEEccccHHHHHHHHHHHhCCCccCCCCeEEEeccEEEEEcCC----CceEeeCCccCCCC------cEEEEEec
Confidence 9999999999632 22221 2222 34788999999999885 79999999999875 79999997
Q ss_pred CceeeEEeCCCCC
Q 009462 469 LRQVNMLATPCCR 481 (534)
Q Consensus 469 ~~~v~mL~~~~~~ 481 (534)
++++|+++..+.
T Consensus 288 -~al~vl~p~~~~ 299 (301)
T COG1597 288 -GALRVLVPPDRP 299 (301)
T ss_pred -ccEEEEcCCCCC
Confidence 699999998764
No 14
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=335.88 Aligned_cols=287 Identities=20% Similarity=0.214 Sum_probs=209.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
.++++||+||+||++++.+.++.+++.|.+.--+.+.. ..++++.+ +.++.. .++...||||||||
T Consensus 242 ~~~~~iI~NP~SG~g~~~~~~~~i~~~L~~~~~~~v~~t~~~~~a~~-la~~~~------------~~~~d~Viv~GGDG 308 (547)
T PRK12361 242 HKRAWLIANPVSGGGKWQEYGEQIQRELKAYFDLTVKLTTPEISAEA-LAKQAR------------KAGADIVIACGGDG 308 (547)
T ss_pred CCceEEEECCCCCCCcHHHHHHHHHHHHhcCCceEEEECCCCccHHH-HHHHHH------------hcCCCEEEEECCCc
Confidence 57899999999999999999999999988641133222 23344432 322211 02345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhcc-CCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCC
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSF-GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~L-Gwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g 238 (534)
|||+|++++.+ .+++|||||+||||||||+| ||+.. ..+++++++.|.+++++++|++.++-
T Consensus 309 Tl~ev~~~l~~----~~~~lgiiP~GTgNdfAr~L~gi~~~-----~~~~~~a~~~i~~g~~~~iD~g~vn~-------- 371 (547)
T PRK12361 309 TVTEVASELVN----TDITLGIIPLGTANALSHALFGLGSK-----LIPVEQACDNIIQGHTQRIDTARCND-------- 371 (547)
T ss_pred HHHHHHHHHhc----CCCCEEEecCCchhHHHHHhcCCCCC-----CccHHHHHHHHHhCCCeEEEEEEEcC--------
Confidence 99999999975 46899999999999999999 99841 02578889999999999999998740
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHH
Q 009462 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (534)
Q Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (534)
++|+|++|+|+||+|+...++.++ +..++++|+..++
T Consensus 372 -----------------------------------~~fln~agiG~da~v~~~~~~~~k--------~~~G~laY~~~~~ 408 (547)
T PRK12361 372 -----------------------------------RLMLLLVGIGFEQKMIESADRERK--------NALGQLAYLDGLW 408 (547)
T ss_pred -----------------------------------eEEEEEEeechhHHHHHhccHHHH--------hccCHHHHHHHHH
Confidence 269999999999999998876554 3458999999999
Q ss_pred hhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCC
Q 009462 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (534)
Q Consensus 319 k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (534)
+. +++ ++. ..++|++ ||+. ..+. +..+++|+|...|++.... +. ..++++||
T Consensus 409 ~~------l~~--~~~--~~l~i~~---dg~~-~~~~--~~~~l~v~N~~~~~~~~~~-Gg-----------g~~~~~DG 460 (547)
T PRK12361 409 RA------VNE--NET--LTLTVTL---DDAE-PQTI--STHSLVVANAAPFTSLLAQ-GG-----------GEPNMTDG 460 (547)
T ss_pred HH------hhc--CCC--eeEEEEE---CCCC-ceEE--EEEEEEEEcCCCccccccc-CC-----------CCCCCCCc
Confidence 88 543 222 2467777 5541 1122 5678889998765331100 00 02578999
Q ss_pred cEEEEEecchh----HHHHH----Hcc-----CCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEE
Q 009462 399 LLEIVGFRDAW----HGLVL----LAP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVE 465 (534)
Q Consensus 399 lLEVv~v~~~~----~~~~l----~~~-----~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~ 465 (534)
+|||+++++.. ++..+ +.+ ....+++.++++++|+.++ ++++|+|||+.... |++|+
T Consensus 461 ~Ldv~~v~~~~~~~~~l~~l~~~~~~g~~~~~~~~~v~~~~~k~v~I~~~~----~~~~~iDGE~~~~~------p~~i~ 530 (547)
T PRK12361 461 LLDITWLDSGGEPGEQLLSLAELALSGLGKEPEANKVHHAHAKKVTISSQK----PIKYVIDGELFEDE------DLTIE 530 (547)
T ss_pred eeEEEEEcCCCcchHHHHHHHHHHHHHhcccCCCCceEEEEeeEEEEEeCC----ceEEEECCccCCce------EEEEE
Confidence 99999998753 32221 111 2346888999999999875 79999999999864 89999
Q ss_pred EEeCceeeEEeCCC
Q 009462 466 ISHLRQVNMLATPC 479 (534)
Q Consensus 466 I~~~~~v~mL~~~~ 479 (534)
|.+ ++++++++.+
T Consensus 531 v~p-~al~vlvp~~ 543 (547)
T PRK12361 531 VQP-ASLKVFVPYQ 543 (547)
T ss_pred Eec-CceEEEecCc
Confidence 997 5999999654
No 15
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=100.00 E-value=6.3e-38 Score=294.63 Aligned_cols=160 Identities=36% Similarity=0.654 Sum_probs=141.9
Q ss_pred eeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEe
Q 009462 276 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 355 (534)
Q Consensus 276 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~l 355 (534)
|+||||||+||+|+++||+.|+++|++|+||+.||++|+..|+++ ++.+.++++.+.+++++ ||+ .+++
T Consensus 2 ~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~------~~~~~~~~~~~~i~l~~---dg~--~~~l 70 (161)
T PF00609_consen 2 MNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKA------LFQRSCKNLPKKIELEV---DGK--EVDL 70 (161)
T ss_pred eEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHH------HHhchhcCchhhccccc---CCe--eEee
Confidence 899999999999999999999999999999999999999999999 44445677777788887 776 7888
Q ss_pred ccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHHHHHHccCCCccEEEeecEEEEEEc
Q 009462 356 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFE 435 (534)
Q Consensus 356 p~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~~~l~~~~~~~~rl~Q~~~v~I~~~ 435 (534)
|.++++|+++|+|||+||.++|+........ ..+.+++++||+|||+++++++|++..+++.++++|++|++.|+|+++
T Consensus 71 p~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~~~i~i~~~ 149 (161)
T PF00609_consen 71 PSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQGRPIRIETK 149 (161)
T ss_pred ecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecCCEEEEEEC
Confidence 8889999999999999999999875432111 367889999999999999999999988888889999999999999998
Q ss_pred cCCCccceeeecCCc
Q 009462 436 KGAADHTFMRIDGEP 450 (534)
Q Consensus 436 ~~~~~~~~vqiDGE~ 450 (534)
++ ++||||||||
T Consensus 150 ~~---~~~~QvDGEp 161 (161)
T PF00609_consen 150 EN---KVPFQVDGEP 161 (161)
T ss_pred CC---ceeEEeCCCC
Confidence 61 6999999997
No 16
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=7.4e-36 Score=324.25 Aligned_cols=295 Identities=16% Similarity=0.192 Sum_probs=204.4
Q ss_pred CCCeEEEEEcCCCCCCChhhHHH-HHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLL-TYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~-~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~G 156 (534)
.+++++||+||.||++++.+++. .++.+|....+ +++.. ..++++.+ +.+.+. ......|||+|
T Consensus 110 ~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T~~~ghA~~-la~~~~------------~~~~D~VV~vG 176 (481)
T PLN02958 110 RPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQETKYQLHAKE-VVRTMD------------LSKYDGIVCVS 176 (481)
T ss_pred CCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEeccCccHHHH-HHHHhh------------hcCCCEEEEEc
Confidence 45789999999999999888764 68878876543 44322 35666654 222211 12346799999
Q ss_pred CchHHHHHHHHHhcCCC---CCCCCEEEeeCCCccchhhcc----CCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 157 GDGTASWLLGVVSDLKL---PHSPPVATVPLGTGNNIPFSF----GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 157 GDGTV~~Vl~~l~~~~l---~~~~plgiIPlGTGNDlAR~L----Gwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
||||||+|+|+|..... ..++||||||+||||||||+| |++. ++.+++..|..++.+.+|+++|+
T Consensus 177 GDGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gip~--------~~~~A~~~I~~g~~~~vDlg~v~ 248 (481)
T PLN02958 177 GDGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGEPC--------SATNAVLAIIRGHKCSLDVATIL 248 (481)
T ss_pred CCCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCCCc--------CHHHHHHHHHcCCceEEeEEEEE
Confidence 99999999999975310 136899999999999999999 8875 67788888999999999999985
Q ss_pred eeccCCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccc
Q 009462 230 MRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVN 309 (534)
Q Consensus 230 ~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~n 309 (534)
.. + +.| +|+|.+|+|+||+|....+ + .|+.+
T Consensus 249 ~~-----------------------------------~--~~~--f~vn~~g~GfdAdV~~~se--~--------kr~lG 279 (481)
T PLN02958 249 QG-----------------------------------E--TKF--FSVLMLAWGLVADIDIESE--K--------YRWMG 279 (481)
T ss_pred cC-----------------------------------C--ceE--EEEEeeeeehhhhhhcccc--c--------ccccc
Confidence 10 0 011 3589999999999965422 1 34568
Q ss_pred hHHHHHHHHhhhccccccCCCCCcCCcceEEEEEE---------------ec-C----------------------CcEE
Q 009462 310 QSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIM---------------KK-Q----------------------GQWE 351 (534)
Q Consensus 310 kl~Y~~~g~k~~~f~~~l~~~~~k~l~~~i~l~v~---------------~~-d----------------------G~~~ 351 (534)
+++|.+.+++. +++ .+.+ ..+|++. .. + .+|+
T Consensus 280 ~lrY~~~~l~~------l~~--~r~y--~~~I~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 349 (481)
T PLN02958 280 SARLDFYGLQR------ILC--LRQY--NGRISFVPAPGFEAYGEPTSYNGESTSKEESGKDKQHGYQGPDVKLENLDWR 349 (481)
T ss_pred hHHHHHHHHHH------HHh--cCCc--ceEEEEEeccccccccccccccccccccccccccccccccCCccccCCccce
Confidence 99999999998 432 1222 2233320 00 0 0122
Q ss_pred EEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHH--HHHH--ccC-----CCcc
Q 009462 352 ELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG--LVLL--APN-----GHGT 422 (534)
Q Consensus 352 ~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~--~~l~--~~~-----~~~~ 422 (534)
.++. ...+++++|.+++|||+.+.|. |.++||+|||+.+++.+.+ +.++ +.. .+.+
T Consensus 350 ~~~~--~fl~v~v~N~~~~Ggg~~iaP~-------------A~l~DG~LDlviv~~~s~~~lL~~l~~~~~G~h~~~~~V 414 (481)
T PLN02958 350 TIKG--PFVSVWLHNVPWGGEDTLAAPD-------------AKFSDGYLDLILIKDCPKLALLALMTKLSDGTHVKSPYV 414 (481)
T ss_pred Eeec--ceeEEeeccCcccCCCcccCCc-------------ccCCCCeEEEEEEcCCCHHHHHHHHHHHhCCCccCCCce
Confidence 2211 1233558999999999988774 7899999999999987542 2221 222 2457
Q ss_pred EEEeecEEEEEEccCC---CccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeEEe
Q 009462 423 RLAQANRVRFEFEKGA---ADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 476 (534)
Q Consensus 423 rl~Q~~~v~I~~~~~~---~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL~ 476 (534)
.+.++++++|+..... ..+.++|+|||..... |++|++.+. ++.++-
T Consensus 415 ~~~k~k~~~I~~~~~~~~~~~~~~i~iDGE~~~~~------p~~i~v~~~-al~~~~ 464 (481)
T PLN02958 415 MYLKVKAFVLEPGPRTDDPTKGGIIDSDGEVLARG------NGSYKCDQK-ALMSYD 464 (481)
T ss_pred EEEEEEEEEEEECCcccCcCcCCeEEECCcccCCC------Cceeeeccc-cccccC
Confidence 8899999999874210 1246899999998764 799999874 666663
No 17
>PLN02204 diacylglycerol kinase
Probab=100.00 E-value=1.6e-30 Score=283.41 Aligned_cols=315 Identities=16% Similarity=0.166 Sum_probs=206.4
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~-~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
..++++|||||.||++.+.+.|..+..+|....+ +++. ...++++.+ +.+.+..+ .......||||||
T Consensus 158 r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v~~T~~aghA~d-~~~~~~~~---------~l~~~D~VVaVGG 227 (601)
T PLN02204 158 RPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKVIVTERAGHAFD-VMASISNK---------ELKSYDGVIAVGG 227 (601)
T ss_pred CCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHHhhh---------hccCCCEEEEEcC
Confidence 4578999999999999999999999999876544 3332 235666654 22221100 0123467999999
Q ss_pred chHHHHHHHHHhcCCC----------------------------------------------------------------
Q 009462 158 DGTASWLLGVVSDLKL---------------------------------------------------------------- 173 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l---------------------------------------------------------------- 173 (534)
|||+|+|+|+|...+.
T Consensus 228 DGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (601)
T PLN02204 228 DGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDNEDHSPLLSDSVQEVMNFRTENGSCEGDQD 307 (601)
T ss_pred ccHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999963110
Q ss_pred ------CCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCCCCCCCCCCC
Q 009462 174 ------PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLE 247 (534)
Q Consensus 174 ------~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g~~~~i~~~~ 247 (534)
...++|||||+|||||||+.++.+. ++...+..|..|+.+.+|+++|+-.... .
T Consensus 308 ~~~~~~~~~~~lGIIPaGSgN~~a~~~~g~~--------dp~taa~~Ii~G~~~~lDig~V~~~~~~----~-------- 367 (601)
T PLN02204 308 SDFPFPNERFRFGIIPAGSTDAIVMCTTGER--------DPVTSALHIILGRRVCLDIAQVVRWKTT----S-------- 367 (601)
T ss_pred ccccccCCCceEEEECCccHHHHHHHccCCC--------CHHHHHHHHHhCCCeEeeEEEEeccccc----c--------
Confidence 1357899999999999998887664 5777788899999999999998631100 0
Q ss_pred CCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhhhcccccc
Q 009462 248 LPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPL 327 (534)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l 327 (534)
.+ +. ..+.+||.|.+|+||||+|+.+-++ .|+.|+++|.+.+++. +
T Consensus 368 ----------------~~-~~-~~~~ryf~s~ag~Gf~gdVi~esek----------~R~mG~~rY~~~g~k~------~ 413 (601)
T PLN02204 368 ----------------TS-EI-EPYVRYAASFAGYGFYGDVISESEK----------YRWMGPKRYDYAGTKV------F 413 (601)
T ss_pred ----------------cc-cc-cccceEEEEEeecchHHHHHHHhhh----------hcccchHHHHHHHHHH------H
Confidence 00 00 0122589999999999999977433 3457999999999998 4
Q ss_pred CCCCCcCCcceEEEEEEecCCcEEEEEe------------ccc---e---eEEEEEcCCC--------------------
Q 009462 328 LHPSSRNIAQMAKVKIMKKQGQWEELHI------------PRY---I---RSIVCLNLPS-------------------- 369 (534)
Q Consensus 328 ~~~~~k~l~~~i~l~v~~~dG~~~~i~l------------p~~---i---~~ivilNi~s-------------------- 369 (534)
+. .+.+ .++|.+ ++. ..+. +.. + ..+.|+|.++
T Consensus 414 ~~--~r~y--~~~V~~---d~~--~~~~~~~~~~~~~~~~~~~~~~~~c~~~c~Vcn~~~~~~~~~~~p~~~~~~~~W~~ 484 (601)
T PLN02204 414 LK--HRSY--EAEVAY---LET--ESEKSKASSEARKRTGPKKSEKIVCRTNCSVCNTKVSTNSPSTTPNSCPEETRWLR 484 (601)
T ss_pred Hh--CCCc--eEEEEE---CCe--Eeeecccccccccccccccccchhhhhheeeeccccccccccccccccccccccee
Confidence 42 2232 356766 443 1111 000 0 1355667541
Q ss_pred -CC----CCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHH--HHH---Hcc------CCCccEEEeecEEEEE
Q 009462 370 -FS----GGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG--LVL---LAP------NGHGTRLAQANRVRFE 433 (534)
Q Consensus 370 -~g----GG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~--~~l---~~~------~~~~~rl~Q~~~v~I~ 433 (534)
+| +|..+....+.+ ..+.-.+.|.++||.|+|+.+++..+. +.+ +.. ....+.+.+++.++|+
T Consensus 485 ~~G~f~~vG~~iis~~~~r-ap~gl~pdA~l~DG~LDLilVr~~s~~~~L~~L~~l~~~gG~~l~~~~Ve~~ktk~f~~~ 563 (601)
T PLN02204 485 SKGRFLSVGAAIISNRNER-APDGLVADAHLSDGFLHLILIKDCPHPLYLWHLTQLAKRGGEPLNFEFVEHHKTPAFTFT 563 (601)
T ss_pred ecCceEEeeeecccccccc-cccccCCCCcCCCCeEEEEEECCCCHHHHHHHHHHHHhhcCccCCCCcEEEEEeeEEEEE
Confidence 22 221111100000 000112368999999999999988642 211 121 1234788999999998
Q ss_pred EccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeEEeCC
Q 009462 434 FEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATP 478 (534)
Q Consensus 434 ~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL~~~ 478 (534)
... ++.++++|||..... |+.|+|.+ +.++++++-
T Consensus 564 s~~---~~~~~niDGE~~~~~------~v~v~V~~-~al~lfa~g 598 (601)
T PLN02204 564 SFG---DESVWNLDGEIFQAH------QLSAQVFR-GLVNLFASG 598 (601)
T ss_pred ECC---CCceEEeCCCcCCCc------cEEEEEEc-CeeEEEecC
Confidence 753 147799999998764 79999996 699999864
No 18
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.90 E-value=6.9e-24 Score=199.02 Aligned_cols=159 Identities=32% Similarity=0.637 Sum_probs=123.5
Q ss_pred eeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHHhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEe
Q 009462 276 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 355 (534)
Q Consensus 276 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~l 355 (534)
|+||+|||+||.|++.+++.|+++|.+|++++.|+++|+..+++. ++...++++...++|++ ||+ ..++
T Consensus 2 ~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~------l~~~~~~~~~~~~~i~~---dg~--~~~~ 70 (160)
T smart00045 2 MNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKD------LFFRTCKDLHERIELEC---DGV--DVDL 70 (160)
T ss_pred ccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHH------hhhccccchhhceEEEE---CCE--eccC
Confidence 899999999999999999999999999988889999999999998 32222333323467777 676 4444
Q ss_pred ccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHHHHHHccCCCccEEEeecEEEEEEc
Q 009462 356 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFE 435 (534)
Q Consensus 356 p~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~~~l~~~~~~~~rl~Q~~~v~I~~~ 435 (534)
+..+.+++++|++|||||+.+||..+. ..+.+++++++||+|||+++++.+++..++....+.+++.|+++++|++.
T Consensus 71 ~~~~~~v~v~N~~~~ggG~~i~p~~~~---~~~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~~~v~i~i~ 147 (160)
T smart00045 71 PNSLEGIAVLNIPSYGGGTNLWGTTDK---EDLNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQCSEVRITIK 147 (160)
T ss_pred CCCccEEEEECCCccccCcccccCCcc---cccccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecCceEEEEEe
Confidence 324788999999999999999976321 12346679999999999999998776544434456789999999985543
Q ss_pred cCCCccceeeecCCc
Q 009462 436 KGAADHTFMRIDGEP 450 (534)
Q Consensus 436 ~~~~~~~~vqiDGE~ 450 (534)
. .+++++|+|||+
T Consensus 148 ~--~~~~~~q~DGE~ 160 (160)
T smart00045 148 T--SKTIPMQVDGEP 160 (160)
T ss_pred c--CCceeeecCCCC
Confidence 2 237999999996
No 19
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.87 E-value=5.2e-22 Score=179.61 Aligned_cols=122 Identities=25% Similarity=0.320 Sum_probs=80.6
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcc----CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccC-cEEEEEcC
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNE----NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKR-LRLIVAGG 157 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~----~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~-~~IIv~GG 157 (534)
+++||+||+||++++. ++.+++.|.. .+++.+...++..++. + ... .... ..||++||
T Consensus 1 k~~vi~Np~sG~~~~~--~~~v~~~l~~~~~~~~~~~t~~~~~~~~~~---~-~~~-----------~~~~~~~ivv~GG 63 (130)
T PF00781_consen 1 KVLVIINPKSGGGRAK--WKKVEPALRAAGIDYEVIETESAGHAEALA---R-ILA-----------LDDYPDVIVVVGG 63 (130)
T ss_dssp SEEEEEETTSTTSHHH--HHHHHHHHHHTTCEEEEEEESSTTHHHHHH---H-HHH-----------HTTS-SEEEEEES
T ss_pred CEEEEECCCCCCCchh--HHHHHHHHHHcCCceEEEEEeccchHHHHH---H-HHh-----------hccCccEEEEEcC
Confidence 4799999999999988 3555555543 3444443323333222 1 111 1233 68999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHH-HHHHHHcCceeeEeEEEEe
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLS-FLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~-~L~~I~~a~~~~iD~w~V~ 229 (534)
||||++|++++........++||+||+||||||||+|||+. +... .+..+..+...++|+.+|+
T Consensus 64 DGTl~~vv~~l~~~~~~~~~~l~iiP~GT~N~~ar~lg~~~--------~~~~~a~~~~~~~~~~~~d~~~v~ 128 (130)
T PF00781_consen 64 DGTLNEVVNGLMGSDREDKPPLGIIPAGTGNDFARSLGIPS--------DPEANAALLIILGRVRKIDVGKVN 128 (130)
T ss_dssp HHHHHHHHHHHCTSTSSS--EEEEEE-SSS-HHHHHTT--S--------SHHH-HHHHHHHSEEEEEEEEEET
T ss_pred ccHHHHHHHHHhhcCCCccceEEEecCCChhHHHHHcCCCC--------CcHHHHHHHHHhCCCcEeEEEEeC
Confidence 99999999999875433467999999999999999999996 3333 4555556667799998874
No 20
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.85 E-value=4.4e-21 Score=172.83 Aligned_cols=100 Identities=49% Similarity=0.867 Sum_probs=77.0
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHH
Q 009462 85 LVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWL 164 (534)
Q Consensus 85 lvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~V 164 (534)
+||+||+||++++.+++..+++.+.+.+++.+......++.+ +.+. ......|+++|||||+++|
T Consensus 1 lvi~NP~sG~~~~~~~~~~~~~~l~~~~v~~t~~~~~~~~~~-~~~~--------------~~~~d~vvv~GGDGTi~~v 65 (124)
T smart00046 1 LVFVNPKSGGGKGVKLLRKFRLLLNPAQVFDLTKKGPAAALV-IFRD--------------LPKFDRVLVCGGDGTVGWV 65 (124)
T ss_pred CEEEcCCCCCCccHHHHHHHHHHcCCceEEEEecCChHHHHH-HHhh--------------cCcCCEEEEEccccHHHHH
Confidence 589999999999999999999999888877665433333332 1111 1233489999999999999
Q ss_pred HHHHhcCCCC-CCCCEEEeeCCCccchhhccCCCCC
Q 009462 165 LGVVSDLKLP-HSPPVATVPLGTGNNIPFSFGWGKK 199 (534)
Q Consensus 165 l~~l~~~~l~-~~~plgiIPlGTGNDlAR~LGwg~~ 199 (534)
++++...... ..+|||+||+||||||||+|||+.+
T Consensus 66 vn~l~~~~~~~~~~plgiiP~GTgNdfar~lgi~~~ 101 (124)
T smart00046 66 LNALDKRELPLPEPPVAVLPLGTGNDLARSLGWGGG 101 (124)
T ss_pred HHHHHhcccccCCCcEEEeCCCChhHHHHHcCCCCC
Confidence 9999764211 1289999999999999999999975
No 21
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.85 E-value=1.4e-19 Score=194.80 Aligned_cols=300 Identities=19% Similarity=0.214 Sum_probs=191.3
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHH-HHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLT-YRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~-~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~G 156 (534)
..+.++||+||.+|.+++.+++.. .+-+|....+ |++.. ++|.+|.+ +.+.+. .....-||++|
T Consensus 178 r~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~evv~T~~~~HAre-i~rt~d------------l~kyDgIv~vs 244 (579)
T KOG1116|consen 178 RPRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEVVLTTRPNHARE-IVRTLD------------LGKYDGIVCVS 244 (579)
T ss_pred CCccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEEEEecCccHHHH-HHHhhh------------ccccceEEEec
Confidence 458899999999999999887765 4446666555 55433 57888876 444321 22455799999
Q ss_pred CchHHHHHHHHHhcCC---CCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeecc
Q 009462 157 GDGTASWLLGVVSDLK---LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMK 233 (534)
Q Consensus 157 GDGTV~~Vl~~l~~~~---l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~ 233 (534)
|||+++||||+|.+-. .....|||+||+||||+||.++.|-.++ + -+..+.-.+.+|....+|+..+.....
T Consensus 245 GDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~~---~--~~~~a~l~iirg~~t~~dv~~v~~~~~ 319 (579)
T KOG1116|consen 245 GDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNGP---D--LPLLATLLIIRGRLTPMDVSVVEYAGK 319 (579)
T ss_pred CCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccCc---c--cchHHHHHHHccCCCchheeehhhccC
Confidence 9999999999997632 2257899999999999999999998642 1 133344556778889999987753210
Q ss_pred CCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHH
Q 009462 234 APKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTY 313 (534)
Q Consensus 234 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y 313 (534)
. . .++.+..+-|+-|+|-.+-++.|+ .|...|
T Consensus 320 ----------------------------------~-~---~fSfLs~~wGlIADiDI~SEk~R~----------mG~~Rf 351 (579)
T KOG1116|consen 320 ----------------------------------D-R---HFSFLSAAWGLIADVDIESEKYRW----------MGPARF 351 (579)
T ss_pred ----------------------------------c-c---eEEEEeeeeeeEEecccchHHHHh----------hcchhh
Confidence 0 0 156788999999999877665554 466666
Q ss_pred HHHHHhhhccccccCCCCCcCCcceEEEEEEe---c--------------------------------------------
Q 009462 314 LKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMK---K-------------------------------------------- 346 (534)
Q Consensus 314 ~~~g~k~~~f~~~l~~~~~k~l~~~i~l~v~~---~-------------------------------------------- 346 (534)
.+.++.. .+| + ++|+. ++.... +
T Consensus 352 ~lg~~~r-l~~--l--r~Y~g-----ri~ylp~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~~~~~~ 421 (579)
T KOG1116|consen 352 TLGAFLR-LIQ--L--RKYKG-----RIEYLPAKGKSAEPLPAHELEAADSEGCLSTHADTEPSEYPRLSVPKMSPKSVL 421 (579)
T ss_pred hHHHHHH-HHh--c--cCCCc-----eEEEecccccccCcccchhhccccccccccccccccccccccccccccCccccc
Confidence 6666665 111 1 22211 111110 0
Q ss_pred --------------------------CCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCCcE
Q 009462 347 --------------------------QGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLL 400 (534)
Q Consensus 347 --------------------------dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlL 400 (534)
...|+.+.- .+...+...=.++.|+.+.+.| .|..+||.+
T Consensus 422 ~s~~~e~s~~~~~~~~~~~p~~~~p~psdw~~~~~-~d~~~~~a~~~sy~~~d~~~~P-------------~A~~~dg~I 487 (579)
T KOG1116|consen 422 RSPVSETSPVIPEDPLHLSPPLEEPLPSDWEVVPG-VDFVCILAILLSYLGADMKFAP-------------AARPDDGLI 487 (579)
T ss_pred cCcccccCcccCCccccCCCcccCCCCcceeeecC-cceeeeehhhhhhccCCccccc-------------ccccCCCeE
Confidence 011211100 0111111111225566555554 589999999
Q ss_pred EEEEecchh--H-HHHHHcc--CC-------CccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEe
Q 009462 401 EIVGFRDAW--H-GLVLLAP--NG-------HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 468 (534)
Q Consensus 401 EVv~v~~~~--~-~~~l~~~--~~-------~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~ 468 (534)
+++++.... + ++.++.. ++ ..+.+..++.++++.... ...+++|||.+... |..+++.+
T Consensus 488 ~lv~~~~~~~r~~ll~~llald~gsh~~~~~p~v~~~~vra~r~epv~~---~~~~~vDGE~~~~e------p~q~~v~p 558 (579)
T KOG1116|consen 488 HLVIVRAGGSRTQLLRLLLALDKGSHLHVECPFVKYVKVRAFRLEPVTP---SGYFAVDGELVPLE------PLQVQVLP 558 (579)
T ss_pred EEEEEccCCcHHHHHHHHHhhcccccccccCCceeEEEeEEEEEEEecC---CceEEecccEeecc------ceeEEecc
Confidence 999998762 2 3333221 22 224556777777776542 47899999998774 79999986
Q ss_pred CceeeEEeCCC
Q 009462 469 LRQVNMLATPC 479 (534)
Q Consensus 469 ~~~v~mL~~~~ 479 (534)
+.+.++.+..
T Consensus 559 -~~i~~~s~~~ 568 (579)
T KOG1116|consen 559 -GLILTLSGRG 568 (579)
T ss_pred -cceeEEeccC
Confidence 5888887754
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.49 E-value=5.2e-13 Score=138.11 Aligned_cols=295 Identities=17% Similarity=0.181 Sum_probs=180.5
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV---fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++.++|||||.+|+++|.++++.+..++--..| +.+++ ...+|.+-++. +. ..++...+=||++||
T Consensus 158 PknllvFinPfgGkG~g~ki~e~V~~~F~la~v~tkvivTE-rAnhA~d~~~e-i~---------~~~~~~yDGiv~VGG 226 (516)
T KOG1115|consen 158 PKNLLVFINPFGGKGNGSKIWETVSKIFILAKVNTKVIVTE-RANHAFDVMAE-IQ---------NKELHTYDGIVAVGG 226 (516)
T ss_pred CccEEEEEcCCCCCCcccchhhhhhhhEEeeecceeEEEEc-cccchhhhhhh-CC---------HhhhhhcccEEEecC
Confidence 488999999999999999999997776532222 22343 44555442211 10 012223345999999
Q ss_pred chHHHHHHHHHhc-------CC--------CCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceee
Q 009462 158 DGTASWLLGVVSD-------LK--------LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQ 222 (534)
Q Consensus 158 DGTV~~Vl~~l~~-------~~--------l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~ 222 (534)
||-.||+|++..- .+ ....|-+||||+|+.|-..-+--=.. | .+.++| .|.-|+...
T Consensus 227 DG~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~gt~-----D--~~TSAl-HI~lG~~l~ 298 (516)
T KOG1115|consen 227 DGFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTTGTR-----D--PVTSAL-HIILGRKLF 298 (516)
T ss_pred chhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEeccCC-----c--ccccee-eeEecccee
Confidence 9999999998732 11 12567799999999998766643222 1 233444 345688899
Q ss_pred EeEEEEeeeccCCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchh
Q 009462 223 IDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEK 302 (534)
Q Consensus 223 iD~w~V~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~ 302 (534)
+|+.+|.-. + .+-||-.|.+|.||-.+|...-++.|
T Consensus 299 vDVctVht~-----------------------------------~---kLiRysaSa~gYGFyGDvl~dSEKYR------ 334 (516)
T KOG1115|consen 299 VDVCTVHTI-----------------------------------E---KLIRYSASAAGYGFYGDVLSDSEKYR------ 334 (516)
T ss_pred eeeeeeeec-----------------------------------c---hheeeehhhhcccccchhhhhhhhhh------
Confidence 999988510 0 11236678999999999998877655
Q ss_pred hhhcccchHHHHHHHHhhhccccccCCCCCcCCcceEEE-----------------EEEecCCcEEEEEeccceeEEEEE
Q 009462 303 FQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKV-----------------KIMKKQGQWEELHIPRYIRSIVCL 365 (534)
Q Consensus 303 f~srl~nkl~Y~~~g~k~~~f~~~l~~~~~k~l~~~i~l-----------------~v~~~dG~~~~i~lp~~i~~ivil 365 (534)
+.+...|=+.|+|. | +.|+.++. .+.. ...+.+.+|..+. .....|.|.
T Consensus 335 ----WmGp~RYDfsglKt--f---lkH~~Yeg---eVsFlpa~sen~~qe~~~~g~~~~~~~k~Wq~~~--g~Fl~V~c~ 400 (516)
T KOG1115|consen 335 ----WMGPKRYDFSGLKT--F---LKHRSYEG---EVSFLPAESENPCQEPCPSGASLHTRSKTWQRNT--GRFLKVLCR 400 (516)
T ss_pred ----ccCchhhhhHHHHH--H---Hhccccce---EEEecccccCCchhccccccCCcccCcchhhhhh--hheeeeeEe
Confidence 45678999999998 2 22332221 1111 0000022343222 134567777
Q ss_pred cCCCCCCCCCCCCCCccccccccCCCCCcccCCcEEEEEecchhHH--HHHH---cc-----CCCccEEEeecEEEEEEc
Q 009462 366 NLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG--LVLL---AP-----NGHGTRLAQANRVRFEFE 435 (534)
Q Consensus 366 Ni~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDGlLEVv~v~~~~~~--~~l~---~~-----~~~~~rl~Q~~~v~I~~~ 435 (534)
|+|....-..-|-. +...++||-++++.++..+.. +..+ .. ...-+....+.+|.....
T Consensus 401 aipciC~~~PrGLa-----------P~T~LndGs~dLil~R~~SRF~fi~fl~r~a~~~~qfdf~fVe~y~v~~v~~~s~ 469 (516)
T KOG1115|consen 401 AIPCICNSKPRGLA-----------PSTTLNDGSEDLILCRTKSRFLFIGFLVRSARNERQFDFLFVEAYLVDGVLHLSL 469 (516)
T ss_pred eccccccCCCCCcC-----------CccccCCCccceeeeecccchHHHHHHHHHhhcccccCceeeeeeeeeeEEEEee
Confidence 87764422111111 136799999999999987643 2222 11 122345566667666554
Q ss_pred cC---CCccceeeecCCcCCCCCCCCCCcEEEEEEe
Q 009462 436 KG---AADHTFMRIDGEPWKQPLPVDEDTVVVEISH 468 (534)
Q Consensus 436 ~~---~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~ 468 (534)
.. ..++....+|||.+.++ .|+.|++.+
T Consensus 470 ~~d~~~~d~~eWN~DGeile~p-----~~lh~rlHp 500 (516)
T KOG1115|consen 470 IKDCSRPDYLEWNLDGEILEQP-----KPLHFRLHP 500 (516)
T ss_pred cCCCCCCCcceeccCcchhcCC-----cceEEEech
Confidence 31 13346689999999997 478888875
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.62 E-value=2.2e-07 Score=96.77 Aligned_cols=130 Identities=18% Similarity=0.096 Sum_probs=75.4
Q ss_pred CCeEEEEEcCCCCCCChhhHHHH-HHHHhcc--CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLT-YRSLLNE--NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~-~~~~L~~--~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
.++++|++||.+-.+.......+ ..-+|+- .||=.+.....+++.. +...+ + ...+.|+|+||
T Consensus 60 ~Kkv~V~~Np~ank~~~r~~f~kna~P~lHLaG~~V~Ivktd~~gqak~-l~e~~----------~---t~~Dii~VaGG 125 (535)
T KOG4435|consen 60 PKKVFVLVNPEANKRGCRDQFNKNALPLLHLAGVQVDIVKTDNQGQAKA-LAEAV----------D---TQEDIIYVAGG 125 (535)
T ss_pred cceEEEEechhhccchhhhhhhcccchheeeccceEEEEecCcHHHHHH-HHHHh----------c---cCCCeEEEecC
Confidence 48999999999876554443332 2234443 3442222222333211 11111 1 12378999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCce---eeEeE
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE---MQIDS 225 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~---~~iD~ 225 (534)
|||+++|+.++...+ ....|++++|.|--|--..+.-..-...+++.+.+-+++..+.+++. ..+|+
T Consensus 126 DGT~~eVVTGi~Rrr-~~~~pv~~~P~G~~~l~~~s~l~~vfe~~d~V~h~~~a~~avikde~ksv~~fdv 195 (535)
T KOG4435|consen 126 DGTIGEVVTGIFRRR-KAQLPVGFYPGGYDNLWLKSMLPSVFENSDDVRHACEAAMAVIKDEKKSVYAFDV 195 (535)
T ss_pred CCcHHHhhHHHHhcc-cccCceeeccCccchHhhhhhchhhhccchHHHHHHHHHHHHhcccccceEEEEe
Confidence 999999999998743 45789999999988764443322221223334445555556666665 55665
No 24
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.98 E-value=4.1e-05 Score=78.49 Aligned_cols=113 Identities=13% Similarity=0.102 Sum_probs=71.4
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV 161 (534)
++.+|+|+. ...+.++++++.+.|....+ +.+....... .. ...... + ... ...+...||++|||||+
T Consensus 2 ~v~iv~~~~--k~~~~~~~~~I~~~L~~~g~~v~v~~~~~~~-~~-~~~~~~-~----~~~--~~~~~d~vi~iGGDGTl 70 (277)
T PRK03708 2 RFGIVARRD--KEEALKLAYRVYDFLKVSGYEVVVDSETYEH-LP-EFSEED-V----LPL--EEMDVDFIIAIGGDGTI 70 (277)
T ss_pred EEEEEecCC--CHHHHHHHHHHHHHHHHCCCEEEEecchhhh-cC-cccccc-c----ccc--cccCCCEEEEEeCcHHH
Confidence 367788864 45777888899888865433 2222100000 00 000000 0 000 00134579999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCcee
Q 009462 162 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (534)
Q Consensus 162 ~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~ 221 (534)
.++++ +.. ..+||..||+||. +|...+.. .++.++|+.+.++...
T Consensus 71 L~a~~-~~~----~~~pi~gIn~G~l-GFl~~~~~---------~~~~~~l~~i~~g~~~ 115 (277)
T PRK03708 71 LRIEH-KTK----KDIPILGINMGTL-GFLTEVEP---------EETFFALSRLLEGDYF 115 (277)
T ss_pred HHHHH-hcC----CCCeEEEEeCCCC-CccccCCH---------HHHHHHHHHHHcCCce
Confidence 99999 654 4789999999999 88887762 3688899999998654
No 25
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.88 E-value=9.4e-05 Score=76.84 Aligned_cols=122 Identities=16% Similarity=0.100 Sum_probs=73.5
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
.+++++|+|| |.....+++..+.+.|.... ++................. .......||++|||
T Consensus 3 ~kkv~lI~n~--~~~~~~~~~~~i~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-------------~~~~~d~vi~~GGD 67 (305)
T PRK02645 3 LKQVIIAYKA--GSSQAKEAAERCAKQLEARGCKVLMGPSGPKDNPYPVFLAS-------------ASELIDLAIVLGGD 67 (305)
T ss_pred cCEEEEEEeC--CCHHHHHHHHHHHHHHHHCCCEEEEecCchhhccccchhhc-------------cccCcCEEEEECCc
Confidence 4679999998 44566677888887775433 3221111111111100000 01124579999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC-CCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEee
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPl-GTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~ 230 (534)
||+..+++.+.. ..+||..|.+ |+-.=|+..-... .. .++|+.+.+++..--.+..+..
T Consensus 68 GT~l~~~~~~~~----~~~pv~gin~~G~lGFL~~~~~~~--------~~-~~~l~~i~~g~~~i~~r~~L~~ 127 (305)
T PRK02645 68 GTVLAAARHLAP----HDIPILSVNVGGHLGFLTHPRDLL--------QD-ESVWDRLQEDRYAIERRMMLQA 127 (305)
T ss_pred HHHHHHHHHhcc----CCCCEEEEecCCcceEecCchhhc--------ch-HHHHHHHHcCCceEEEeeEEEE
Confidence 999999998864 4688888998 7654444321111 13 6789999999876556665554
No 26
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.49 E-value=0.035 Score=56.35 Aligned_cols=48 Identities=19% Similarity=0.284 Sum_probs=37.0
Q ss_pred CCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeEEe
Q 009462 419 GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 476 (534)
Q Consensus 419 ~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL~ 476 (534)
+.++.+-+.++|+|++.+ +..+++|||..... .+++|++++ .+++++.
T Consensus 188 ~rpiVlp~~~~I~I~~~~----~~~l~iDGe~~~~~-----~~I~I~~s~-~~l~li~ 235 (256)
T PRK14075 188 TRSIVIPSNEKVTVESQR----DINLIVDGVLVGKT-----NRITVKKSR-RYVRILR 235 (256)
T ss_pred CCceEcCCCCEEEEEECC----ceEEEECCCCcCCC-----cEEEEEECC-CEEEEEE
Confidence 344555578889998865 68899999986542 489999997 4899998
No 27
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.47 E-value=0.00083 Score=69.44 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=75.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEcCc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAGGD 158 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~-~~~~~IIv~GGD 158 (534)
.+.+.+|.|+.+ ....+++..+.+.|....+ +.+... ....+. .. .. . .... ... .....||+.|||
T Consensus 5 ~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~~-~~~~~~-~~-~~---~--~~~~-~~~~~~~d~vi~lGGD 73 (292)
T PRK03378 5 FKCIGIVGHPRH--PTALTTHEMLYHWLTSKGYEVIVEQQ-IAHELQ-LK-NV---K--TGTL-AEIGQQADLAIVVGGD 73 (292)
T ss_pred CCEEEEEEeCCC--HHHHHHHHHHHHHHHHCCCEEEEecc-hhhhcC-cc-cc---c--ccch-hhcCCCCCEEEEECCc
Confidence 467899999755 5677788888887765443 212211 000000 00 00 0 0000 011 124579999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCcc-chhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEee
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGN-NIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPlGTGN-DlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~ 230 (534)
||+..++..+... .+.+||.++|| +|...+.. .++.++|+.+.++....-.+..+..
T Consensus 74 GT~L~aa~~~~~~------~~Pilgin~G~lGFl~~~~~---------~~~~~~l~~i~~g~~~i~~r~~L~~ 131 (292)
T PRK03378 74 GNMLGAARVLARY------DIKVIGINRGNLGFLTDLDP---------DNALQQLSDVLEGHYISEKRFLLEA 131 (292)
T ss_pred HHHHHHHHHhcCC------CCeEEEEECCCCCcccccCH---------HHHHHHHHHHHcCCceEEEEEEEEE
Confidence 9999999877541 24578888888 77776552 3788899999999865555655543
No 28
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.27 E-value=0.002 Score=67.11 Aligned_cols=55 Identities=27% Similarity=0.396 Sum_probs=41.4
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh-hccCCCCCCCCCchHHHHHHHHHHHcC
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP-FSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA-R~LGwg~~~~~~~~~~~~~~L~~I~~a 218 (534)
..|+.+|||||...|++++. .++||--||+||-|=++ .++ . +++...++..+.++
T Consensus 102 dlIvfaGGDGTarDVa~av~-----~~vPvLGipaGvk~~SgvfA~--~-------P~~aa~l~~~~lkg 157 (355)
T COG3199 102 DLIVFAGGDGTARDVAEAVG-----ADVPVLGIPAGVKNYSGVFAL--S-------PEDAARLLGAFLKG 157 (355)
T ss_pred eEEEEeCCCccHHHHHhhcc-----CCCceEeeccccceecccccc--C-------hHHHHHHHHHHhcc
Confidence 46999999999999999984 36777778999988654 222 2 24667777777777
No 29
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.04 E-value=0.008 Score=62.28 Aligned_cols=122 Identities=19% Similarity=0.184 Sum_probs=71.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeec-C---chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK-A---PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~-~---p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~ 155 (534)
++.+.||+|+.+ ..+.++++.+.+.|....+ +.+... . +..+.. ....+ .+ ......||++
T Consensus 4 ~~~v~iv~~~~k--~~a~e~~~~i~~~L~~~giev~v~~~~~~~~~~~~~~--~~~~~-------~~---~~~~d~vi~~ 69 (295)
T PRK01231 4 FRNIGLIGRLGS--SSVVETLRRLKDFLLDRGLEVILDEETAEVLPGHGLQ--TVSRK-------LL---GEVCDLVIVV 69 (295)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecchhhhcCccccc--ccchh-------hc---ccCCCEEEEE
Confidence 356899999776 4667788888887754432 222111 0 100000 00000 00 1124579999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEee
Q 009462 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (534)
Q Consensus 156 GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~ 230 (534)
|||||+..++..+.. ..+||--|.+|+ ||.-.. .+..++.++|+.+.+|...--.+..+..
T Consensus 70 GGDGt~l~~~~~~~~----~~~Pvlgin~G~-------lGFl~~---~~~~~~~~~l~~~~~g~~~i~~r~~L~~ 130 (295)
T PRK01231 70 GGDGSLLGAARALAR----HNVPVLGINRGR-------LGFLTD---IRPDELEFKLAEVLDGHYQEEERFLLEA 130 (295)
T ss_pred eCcHHHHHHHHHhcC----CCCCEEEEeCCc-------cccccc---CCHHHHHHHHHHHHcCCceEEEEEEEEE
Confidence 999999999987753 356655566664 332221 2235788999999998765555655543
No 30
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=96.88 E-value=0.006 Score=62.73 Aligned_cols=69 Identities=20% Similarity=0.203 Sum_probs=49.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEE
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~ 227 (534)
+...||++|||||+-.++..+.. ..+||--|++||-|=|+ .+.. .++..+++.+.++....-.+..
T Consensus 76 ~~D~ii~lGGDGT~L~~~~~~~~----~~~Pilgin~G~lgfl~-~~~~---------~~~~~~l~~~~~g~~~~~~r~~ 141 (285)
T PF01513_consen 76 GVDLIIVLGGDGTFLRAARLFGD----YDIPILGINTGTLGFLT-EFEP---------EDIEEALEKILAGEYSIEERMR 141 (285)
T ss_dssp CSSEEEEEESHHHHHHHHHHCTT----ST-EEEEEESSSSTSSS-SEEG---------CGHHHHHHHHHHTHCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHhcc----CCCcEEeecCCCccccc-cCCH---------HHHHHHHHHHhcCCeEEEEeee
Confidence 44689999999999999988754 36788888999854333 3322 3688889999888766666655
Q ss_pred Eee
Q 009462 228 ILM 230 (534)
Q Consensus 228 V~~ 230 (534)
+..
T Consensus 142 l~~ 144 (285)
T PF01513_consen 142 LEV 144 (285)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 31
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.40 E-value=0.051 Score=56.64 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=71.5
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhh-----hccchhhhhh-ccCcEE
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFK-----AAGDVFASEI-EKRLRL 152 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~-----~~~d~~a~~~-~~~~~I 152 (534)
+.+.+.+|.|+.. ..+.++...+.+.|....+ +.+.... ...+. ....... ...+. .... .....|
T Consensus 4 ~~~~I~iv~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~D~v 76 (306)
T PRK03372 4 ASRRVLLVAHTGR--DEATEAARRVAKQLGDAGIGVRVLDAE-AVDLG---ATHPAPDDFRAMEVVDA-DPDAADGCELV 76 (306)
T ss_pred CccEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEeech-hhhhc---ccccccccccccccccc-hhhcccCCCEE
Confidence 4567899988754 5667788888887765443 1121110 00000 0000000 00000 0001 124579
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 153 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 153 Iv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
|+.|||||+-.++..+.. ..+||--|.+|+ ||.=.. .+..++..+|+.+.++...--.+..+.
T Consensus 77 i~lGGDGT~L~aar~~~~----~~~PilGIN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~y~i~~R~~L~ 139 (306)
T PRK03372 77 LVLGGDGTILRAAELARA----ADVPVLGVNLGH-------VGFLAE---AEAEDLDEAVERVVDRDYRVEERMTLD 139 (306)
T ss_pred EEEcCCHHHHHHHHHhcc----CCCcEEEEecCC-------Cceecc---CCHHHHHHHHHHHHcCCceEEEeeeEE
Confidence 999999999999887654 356666678887 333221 123578889999999986554544443
No 32
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.29 E-value=0.057 Score=55.80 Aligned_cols=123 Identities=18% Similarity=0.162 Sum_probs=71.1
Q ss_pred CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEE
Q 009462 78 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVA 155 (534)
Q Consensus 78 ~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~-~~~~~IIv~ 155 (534)
+...+.+.+|+|+.. .+.+++..+.+.|...++ +-+.. .....+ . . .+-.. ... ++...||+.
T Consensus 7 ~~~~~~i~ii~~~~~---~~~~~~~~i~~~l~~~g~~~~~~~-~~~~~~----~-~-----~~~~~-~~~~~~~Dlvi~i 71 (287)
T PRK14077 7 HKNIKKIGLVTRPNV---SLDKEILKLQKILSIYKVEILLEK-ESAEIL----D-L-----PGYGL-DELFKISDFLISL 71 (287)
T ss_pred cccCCEEEEEeCCcH---HHHHHHHHHHHHHHHCCCEEEEec-chhhhh----c-c-----cccch-hhcccCCCEEEEE
Confidence 344678999999863 677888888888865443 22221 110000 0 0 00000 001 134579999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 156 GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
|||||+-.++..+.. ..+||--|-+|+ ||.=. ..+..+++++|+.+.+|....-.+..+.
T Consensus 72 GGDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFLt---~~~~~~~~~~l~~i~~g~y~ie~r~~L~ 131 (287)
T PRK14077 72 GGDGTLISLCRKAAE----YDKFVLGIHAGH-------LGFLT---DITVDEAEKFFQAFFQGEFEIEKPYMLS 131 (287)
T ss_pred CCCHHHHHHHHHhcC----CCCcEEEEeCCC-------cccCC---cCCHHHHHHHHHHHHcCCCeEEEEEEEE
Confidence 999999888877654 245544456665 34322 1223578889999999875544444444
No 33
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.12 E-value=0.084 Score=54.80 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=71.6
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeec--CchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEE
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK--APDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVA 155 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~--~p~~al~~l~~~l~~l~~~~d~~a~~~-~~~~~IIv~ 155 (534)
+.+.+.+|+|+.. ....+++..+.+.|....+ +.+... .+......-...... .+ . ... .....||+.
T Consensus 4 ~~~~i~ii~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~----~~-~-~~~~~~~D~vi~l 75 (296)
T PRK04539 4 PFHNIGIVTRPNT--PDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGCHI----VN-K-TELGQYCDLVAVL 75 (296)
T ss_pred CCCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecccccccchhccccccccc----cc-h-hhcCcCCCEEEEE
Confidence 3577999999865 4667788888887765442 222210 000000000000000 00 0 011 124579999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 156 GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++..+|+.+.++....-.+..+.
T Consensus 76 GGDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l~ 135 (296)
T PRK04539 76 GGDGTFLSVAREIAP----RAVPIIGINQGH-------LGFLTQ---IPREYMTDKLLPVLEGKYLAEERILIE 135 (296)
T ss_pred CCcHHHHHHHHHhcc----cCCCEEEEecCC-------CeEeec---cCHHHHHHHHHHHHcCCceEEEeeeEE
Confidence 999999999887654 245554467776 444332 123578889999999876555555544
No 34
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=96.09 E-value=0.073 Score=55.12 Aligned_cols=124 Identities=13% Similarity=0.087 Sum_probs=70.2
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhh-hhh-ccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFA-SEI-EKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a-~~~-~~~~~IIv~GG 157 (534)
.+.+.+|+|+.+ ....+++..+.+.|....+ +-+..... ..+. . ..+. . +. ... .....||++||
T Consensus 5 ~~~v~iv~~~~~--~~~~e~~~~i~~~L~~~g~~v~v~~~~~-~~~~-~-~~~~-----~--~~~~~~~~~~d~vi~~GG 72 (291)
T PRK02155 5 FKTVALIGRYQT--PGIAEPLESLAAFLAKRGFEVVFEADTA-RNIG-L-TGYP-----A--LTPEEIGARADLAVVLGG 72 (291)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecchh-hhcC-c-cccc-----c--cChhHhccCCCEEEEECC
Confidence 356888888765 4666778888887755432 21211100 0000 0 0000 0 00 011 12457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEee
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~ 230 (534)
|||+..++..+.. ..+||--|.+|+=.=|+ .+ ..+++.++|+.+.+|...--.++.+.+
T Consensus 73 DGt~l~~~~~~~~----~~~pilGIn~G~lGFL~---~~-------~~~~~~~~l~~~~~g~~~i~~r~~L~~ 131 (291)
T PRK02155 73 DGTMLGIGRQLAP----YGVPLIGINHGRLGFIT---DI-------PLDDMQETLPPMLAGNYEEEERMLLEA 131 (291)
T ss_pred cHHHHHHHHHhcC----CCCCEEEEcCCCccccc---cC-------CHHHHHHHHHHHHcCCceEEEeEEEEE
Confidence 9999999988754 24554446666642222 12 235788899999999865555665543
No 35
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.93 E-value=0.13 Score=53.55 Aligned_cols=128 Identities=13% Similarity=0.047 Sum_probs=68.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHH---H-HHhhhccchhhhhh-ccCcEEEEE
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVT---L-EKFKAAGDVFASEI-EKRLRLIVA 155 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~---l-~~l~~~~d~~a~~~-~~~~~IIv~ 155 (534)
+.+.+|+|+.. ..+.++...+.+.|...++ +.+... ....+. .... + ..-..+.+ . ... +....||+.
T Consensus 2 ~~igiv~n~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~Dlvi~i 75 (305)
T PRK02649 2 PKAGIIYNDGK--PLAVRTAEELQDKLEAAGWEVVRASS-SGGILG-YANPDQPVCHTGIDQLV-P-PGFDSSMKFAIVL 75 (305)
T ss_pred CEEEEEEcCCC--HHHHHHHHHHHHHHHHCCCEEEEecc-hhhhcC-ccccccccccccccccC-h-hhcccCcCEEEEE
Confidence 46888999743 4577788888887765443 222211 000000 0000 0 00000000 0 001 124579999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 156 GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
|||||+-.++..+.. ..+||--|-+|+ ||.=.. ....++.++|+.+.++...--.+-.+.
T Consensus 76 GGDGTlL~aar~~~~----~~iPilGIN~G~-------lGFLt~---~~~~~~~~~l~~l~~g~y~ie~r~~L~ 135 (305)
T PRK02649 76 GGDGTVLSAARQLAP----CGIPLLTINTGH-------LGFLTE---AYLNQLDEAIDQVLAGQYTIEERTMLT 135 (305)
T ss_pred eCcHHHHHHHHHhcC----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHcCCcEEEEeeeEE
Confidence 999999999887654 345544456665 442221 123578899999999876544444443
No 36
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.61 E-value=0.17 Score=51.65 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=63.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV 161 (534)
+.+.+|+|+.. .+.++...++++|...++-.... . .+...||+.|||||+
T Consensus 3 ~~i~iv~~~~~---~a~~~~~~l~~~l~~~g~~~~~~--~-------------------------~~~D~vi~lGGDGT~ 52 (264)
T PRK03501 3 RNLFFFYKRDK---ELVEKVKPLKKIAEEYGFTVVDH--P-------------------------KNANIIVSIGGDGTF 52 (264)
T ss_pred cEEEEEECCCH---HHHHHHHHHHHHHHHCCCEEEcC--C-------------------------CCccEEEEECCcHHH
Confidence 46778888765 66677888888776544311110 0 013569999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC-CCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 162 SWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 162 ~~Vl~~l~~~~l~~~~plgiIPl-GTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
-.++..+.. ...+|+--|.+ | .||.=.. .+.+++.++++.+.+++..--.+..+.
T Consensus 53 L~a~~~~~~---~~~~pilgIn~~G-------~lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l~ 108 (264)
T PRK03501 53 LQAVRKTGF---REDCLYAGISTKD-------QLGFYCD---FHIDDLDKMIQAITKEEIEVRKYPTIE 108 (264)
T ss_pred HHHHHHhcc---cCCCeEEeEecCC-------CCeEccc---CCHHHHHHHHHHHHcCCcEEEEeeeEE
Confidence 888876543 12455333455 5 3343221 123578899999999876544444443
No 37
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.56 E-value=0.2 Score=51.88 Aligned_cols=127 Identities=14% Similarity=0.165 Sum_probs=68.7
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHH-HHhhhccchhhhhh-ccCcEEEEEcCch
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTL-EKFKAAGDVFASEI-EKRLRLIVAGGDG 159 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l-~~l~~~~d~~a~~~-~~~~~IIv~GGDG 159 (534)
.+.+|+|+.. ..+.+++..+.+.|....+ +.+... ....+. ....+ .... ..+.. ... +....||+.||||
T Consensus 2 ~igii~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~~-~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~dlvi~lGGDG 75 (292)
T PRK01911 2 KIAIFGQTYQ--ESASPYIQELFDELEERGAEVLIEEK-FLDFLK-QDLKFHPSYD-TFSDN-EELDGSADMVISIGGDG 75 (292)
T ss_pred EEEEEeCCCC--HHHHHHHHHHHHHHHHCCCEEEEecc-hhhhhc-cccccccccc-cccch-hhcccCCCEEEEECCcH
Confidence 3678888744 5667788888887765443 222211 000000 00000 0000 00000 011 1346799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
|+-.++..+.. ..+||--|-+|+ ||.=.. .+..+++++|+.+.++...--.+..+.
T Consensus 76 T~L~aa~~~~~----~~~PilGIN~G~-------lGFLt~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 131 (292)
T PRK01911 76 TFLRTATYVGN----SNIPILGINTGR-------LGFLAT---VSKEEIEETIDELLNGDYTIEERSLLQ 131 (292)
T ss_pred HHHHHHHHhcC----CCCCEEEEecCC-------CCcccc---cCHHHHHHHHHHHHcCCceEEEEeeEE
Confidence 99988887654 245554467776 444321 223578889999999986555555444
No 38
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=95.22 E-value=0.26 Score=54.46 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=67.4
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhcc---CcEEEEeecCchhHHHH--HHHHHHHhhhccchhhhhh-ccCcEEE
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQ--LYVTLEKFKAAGDVFASEI-EKRLRLI 153 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~---~qVfdL~~~~p~~al~~--l~~~l~~l~~~~d~~a~~~-~~~~~II 153 (534)
+++.++||.||.. ....+++..+.+.|.. .+|+. .. .....+.. ........-.....+ ... .....||
T Consensus 193 ~p~~VgIV~n~~k--~~a~el~~~I~~~L~~~~gi~V~v-e~-~~a~~l~~~~~~~~~~~~~~~~~~~-~~l~~~~DlVI 267 (508)
T PLN02935 193 DPQTVLIITKPNS--TSVRVLCAEMVRWLREQKGLNIYV-EP-RVKKELLSESSYFNFVQTWEDEKEI-LLLHTKVDLVI 267 (508)
T ss_pred CCCEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCEEEE-ec-hhhhhhccccccccccccccccchh-hhcccCCCEEE
Confidence 3588999999865 4666778888877752 33332 11 00000000 000000000000000 001 1346799
Q ss_pred EEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEE
Q 009462 154 VAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 228 (534)
Q Consensus 154 v~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V 228 (534)
+.|||||+-+++..+.. ..+||--|.+|+ ||.=.. ....++.++|+.|.++...--.+-.+
T Consensus 268 siGGDGTlL~Aar~~~~----~~iPILGIN~G~-------LGFLt~---i~~~e~~~~Le~il~G~y~Ie~R~~L 328 (508)
T PLN02935 268 TLGGDGTVLWAASMFKG----PVPPVVPFSMGS-------LGFMTP---FHSEQYRDCLDAILKGPISITLRHRL 328 (508)
T ss_pred EECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------cceecc---cCHHHHHHHHHHHHcCCceEEEEeEE
Confidence 99999999999987654 245544456654 232111 12357888999999987543333333
No 39
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.03 E-value=0.61 Score=47.57 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=41.0
Q ss_pred cEEEEEecchh-HHHHHHccCCCccEEEeecEEEEEEccCC--CccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeE
Q 009462 399 LLEIVGFRDAW-HGLVLLAPNGHGTRLAQANRVRFEFEKGA--ADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNM 474 (534)
Q Consensus 399 lLEVv~v~~~~-~~~~l~~~~~~~~rl~Q~~~v~I~~~~~~--~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~m 474 (534)
.++++.+..+. |....+....+++-+-....|+|++.... .....+.+||+......+ .+.+.|+.+. ..+++
T Consensus 163 ~~~~~~itPI~Ph~~~~~~~~~rplVl~~~~~I~i~~~~~~~~~~~~~l~~DG~~~~~l~~--~d~v~i~~s~-~~~~~ 238 (259)
T PRK00561 163 RIDVIQIIELNPLLHPNQTTIQSPIILPIDTKVEFEIKKAFDHDQFPRFYADGAKLRLGNS--DTTIEISLVR-SQAMF 238 (259)
T ss_pred CCCeEEEEeeCCCCcccccccCCCeEECCCCEEEEEEccCCCCCCcEEEEEcCCeeecCCC--CCEEEEEEcC-ccceE
Confidence 46677776653 21111111235566667777888775411 124578999998765321 2346777775 36774
No 40
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.54 E-value=0.72 Score=52.19 Aligned_cols=66 Identities=17% Similarity=0.303 Sum_probs=44.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEE
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 228 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V 228 (534)
...||+.|||||+-.++..+.. ..+||--|-+|+ ||.=.. ....++.++|+.+.++...--.+-.+
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~----~~~PilGin~G~-------lGFL~~---~~~~~~~~~l~~~~~g~~~i~~r~~L 414 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNG----EEIPIICINMGT-------VGFLTE---FSKEEIFKAIDSIISGEYEIEKRTKL 414 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcC----CCCCEEEEcCCC-------CCcCcc---cCHHHHHHHHHHHHcCCceEEEeEEE
Confidence 3579999999999999887653 345655578887 443321 22357888999999997554344333
No 41
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=92.92 E-value=0.87 Score=46.61 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=59.3
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHH
Q 009462 84 VLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASW 163 (534)
Q Consensus 84 vlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~ 163 (534)
+.+|.|+ ...+.++...+.+.|...++ .+.. ++...||+.|||||+-.
T Consensus 3 i~Ii~~~---~~~~~~~~~~l~~~l~~~g~-~~~~----------------------------~~~Dlvi~iGGDGT~L~ 50 (265)
T PRK04885 3 VAIISNG---DPKSKRVASKLKKYLKDFGF-ILDE----------------------------KNPDIVISVGGDGTLLS 50 (265)
T ss_pred EEEEeCC---CHHHHHHHHHHHHHHHHcCC-ccCC----------------------------cCCCEEEEECCcHHHHH
Confidence 5666663 24566777777777754332 1100 12357999999999998
Q ss_pred HHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEE
Q 009462 164 LLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSW 226 (534)
Q Consensus 164 Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w 226 (534)
.+..+... ...+|+--|.+|+-.=|+ .+ +..++.++++.+.++......+-
T Consensus 51 a~~~~~~~--~~~iPilGIN~G~lGFL~---~~-------~~~~~~~~l~~i~~g~y~i~~r~ 101 (265)
T PRK04885 51 AFHRYENQ--LDKVRFVGVHTGHLGFYT---DW-------RPFEVDKLVIALAKDPGQVVSYP 101 (265)
T ss_pred HHHHhccc--CCCCeEEEEeCCCceecc---cC-------CHHHHHHHHHHHHcCCceEEEEe
Confidence 88776531 124554445666532222 12 22468889999999875544443
No 42
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=91.78 E-value=1.4 Score=45.26 Aligned_cols=114 Identities=20% Similarity=0.198 Sum_probs=61.7
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV 161 (534)
++.+|+|+.. ....+++..+.+.|. .++ +.+.. .....+. . ..... ... +...||+.|||||+
T Consensus 2 ~i~iv~~~~~--~~~~~~~~~i~~~l~-~g~~~~~~~-~~~~~~~-----~-----~~~~~-~~~-~~D~vi~lGGDGT~ 65 (271)
T PRK01185 2 KVAFVIRKDC--KRCIKIAKSIIELLP-PDWEIIYEM-EAAKALG-----M-----DGLDI-EEI-NADVIITIGGDGTI 65 (271)
T ss_pred EEEEEecCCC--HHHHHHHHHHHHHHh-cCCEEEEec-hhhhhcC-----c-----ccCcc-ccc-CCCEEEEEcCcHHH
Confidence 3778888754 466677888887773 332 22221 1111000 0 00000 001 34679999999998
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 162 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 162 ~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
-.++..+ ..|.+| |-+|+= |.=.. ....++.++|+.+.++...--.+..+.
T Consensus 66 L~a~~~~------~~PilG-IN~G~l-------GFL~~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 116 (271)
T PRK01185 66 LRTLQRA------KGPILG-INMGGL-------GFLTE---IEIDEVGSAIKKLIRGEYFIDERMKLK 116 (271)
T ss_pred HHHHHHc------CCCEEE-EECCCC-------ccCcc---cCHHHHHHHHHHHHcCCcEEEEeeEEE
Confidence 7666543 124444 466653 33221 123578889999999876544455444
No 43
>PLN02727 NAD kinase
Probab=91.72 E-value=1.3 Score=52.25 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=65.2
Q ss_pred CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC-cE-EEEeecCchhHHHHHHHHHHHhhh-ccchhhhhh-ccCcEEE
Q 009462 78 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV-IDLGEKAPDKVLHQLYVTLEKFKA-AGDVFASEI-EKRLRLI 153 (534)
Q Consensus 78 ~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~-qV-fdL~~~~p~~al~~l~~~l~~l~~-~~d~~a~~~-~~~~~II 153 (534)
..|.+.|+||.+++. .....+..+.+.|... .+ +-+.. ...+.+... ..+..... .... .... ...+.||
T Consensus 675 ~~p~rtVgIV~K~~~---ea~~~~~eL~~~L~~~~gi~V~VE~-~~a~~l~~~-~~~~~~~~~~~~~-~~el~~~~DLVI 748 (986)
T PLN02727 675 KSTPKTVLLLKKLGQ---ELMEEAKEVASFLYHQEKMNVLVEP-DVHDIFARI-PGFGFVQTFYSQD-TSDLHERVDFVA 748 (986)
T ss_pred CCCCCEEEEEcCCcH---HHHHHHHHHHHHHHhCCCeEEEEec-chHHHhhcc-ccccccceecccc-hhhcccCCCEEE
Confidence 345688999999875 4556666677776653 33 11221 111111000 00000000 0000 0011 1245799
Q ss_pred EEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCce
Q 009462 154 VAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE 220 (534)
Q Consensus 154 v~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~ 220 (534)
+.|||||+-.++..+.. ..+||--|-+|+ ||.=.. .+..++.+.|+.|.++..
T Consensus 749 vLGGDGTlLrAar~~~~----~~iPILGINlGr-------LGFLTd---i~~ee~~~~L~~Il~G~y 801 (986)
T PLN02727 749 CLGGDGVILHASNLFRG----AVPPVVSFNLGS-------LGFLTS---HYFEDFRQDLRQVIHGNN 801 (986)
T ss_pred EECCcHHHHHHHHHhcC----CCCCEEEEeCCC-------cccccc---CCHHHHHHHHHHHHcCCc
Confidence 99999999999887654 345655567774 443221 223567788888888753
No 44
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=90.72 E-value=1.5 Score=45.08 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=41.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHc-CceeeEeEEE
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN-AKEMQIDSWH 227 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~-a~~~~iD~w~ 227 (534)
...||+.|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.+.|+.+.+ +...--.+..
T Consensus 43 ~d~vi~iGGDGT~L~aa~~~~~----~~~PilgIn~G~-------lGFL~~---~~~~~~~~~l~~~~~~g~~~i~~r~~ 108 (272)
T PRK02231 43 AQLAIVIGGDGNMLGRARVLAK----YDIPLIGINRGN-------LGFLTD---IDPKNAYEQLEACLERGEFFVEERFL 108 (272)
T ss_pred CCEEEEECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHhcCCceEEEeee
Confidence 4579999999999988877653 245544457776 443221 122456667777766 6554444444
Q ss_pred Ee
Q 009462 228 IL 229 (534)
Q Consensus 228 V~ 229 (534)
+.
T Consensus 109 L~ 110 (272)
T PRK02231 109 LE 110 (272)
T ss_pred EE
Confidence 43
No 45
>PLN02929 NADH kinase
Probab=90.21 E-value=1.7 Score=45.32 Aligned_cols=73 Identities=21% Similarity=0.148 Sum_probs=46.4
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCc---------cch--hhccCCCCCCCCCchHHHHHHHHHHH
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG---------NNI--PFSFGWGKKNPNTDQQAVLSFLEQVK 216 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTG---------NDl--AR~LGwg~~~~~~~~~~~~~~L~~I~ 216 (534)
....||++|||||+-.++..+ . ..+||--|-.|+. |.| .|.+|.=.. ...+++.++|+.+.
T Consensus 64 ~~Dlvi~lGGDGT~L~aa~~~-~----~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~---~~~~~~~~~L~~il 135 (301)
T PLN02929 64 DVDLVVAVGGDGTLLQASHFL-D----DSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCA---ATAEDFEQVLDDVL 135 (301)
T ss_pred CCCEEEEECCcHHHHHHHHHc-C----CCCcEEEEECCCcccccccccccccccccCcccccc---CCHHHHHHHHHHHH
Confidence 346799999999998888776 3 2455444567742 222 346665332 23457889999999
Q ss_pred cCceeeEeEEEE
Q 009462 217 NAKEMQIDSWHI 228 (534)
Q Consensus 217 ~a~~~~iD~w~V 228 (534)
+|....-.+-.+
T Consensus 136 ~g~~~~~~r~~L 147 (301)
T PLN02929 136 FGRLKPTELSRI 147 (301)
T ss_pred cCCceEEEeeeE
Confidence 987544343333
No 46
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=88.24 E-value=0.97 Score=45.77 Aligned_cols=56 Identities=18% Similarity=0.179 Sum_probs=33.0
Q ss_pred CccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceeeEEeCCCC
Q 009462 420 HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATPCC 480 (534)
Q Consensus 420 ~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~mL~~~~~ 480 (534)
+++-+-....|+|++......++.+-+||...... ..+.|+.+.+..++++....+
T Consensus 178 RplVlp~~~~I~i~~~~~~~~~~~l~~DG~~~~~~-----~~v~I~~s~~~~~~l~~~~~~ 233 (246)
T PRK04761 178 RGALLPNSATVRFDVLEPDKRPVSAVADNTEVRDV-----VEVTIREDKDITVTLLFDPGH 233 (246)
T ss_pred ccEEECCCCEEEEEEecCCCCcEEEEEcCCCcccC-----cEEEEEEcCCccEEEEECCCC
Confidence 44555566678887653212257789999886432 356666664323666665544
No 47
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=87.74 E-value=2 Score=46.57 Aligned_cols=47 Identities=23% Similarity=0.354 Sum_probs=37.5
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCC-------CCCCEEEeeCCCccchhhccCC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLP-------HSPPVATVPLGTGNNIPFSFGW 196 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~-------~~~plgiIPlGTGNDlAR~LGw 196 (534)
...+|+|||||-=++.||....++ +. .-.-+-+||+|. |.+||.||=
T Consensus 75 ~~vKV~v~G~~~y~~~VLr~yVE~-Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 75 PPVKVAVAGGQSYLSAVLRAYVEQ-LSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred CceEEEEEccHHHHHHHHHHHHHH-hccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 456899999999999999877653 22 234488999999 999999974
No 48
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=83.55 E-value=4.3 Score=43.23 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=50.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~----qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+..+..- ..+...+.+.|... .++.+....+.+.++.+.+.++.+++. .......||++||
T Consensus 24 ~rvlvVtd~~v~----~~~~~~l~~~L~~~g~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~------~~dr~~~IIAvGG 93 (355)
T cd08197 24 DKYLLVTDSNVE----DLYGHRLLEYLREAGAPVELLSVPSGEEHKTLSTLSDLVERALAL------GATRRSVIVALGG 93 (355)
T ss_pred CeEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc------CCCCCcEEEEECC
Confidence 678888875432 22455566666432 223333322333233222222222211 1112235777776
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC--CCccc
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPL--GTGNN 189 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGND 189 (534)
|++..+...+... ....+|+..||. ||+.|
T Consensus 94 -Gsv~D~ak~~A~~-~~rgip~I~IPTTlla~~d 125 (355)
T cd08197 94 -GVVGNIAGLLAAL-LFRGIRLVHIPTTLLAQSD 125 (355)
T ss_pred -cHHHHHHHHHHHH-hccCCCEEEecCccccccc
Confidence 8999888876532 124678999998 66666
No 49
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=83.29 E-value=6.3 Score=40.59 Aligned_cols=70 Identities=20% Similarity=0.275 Sum_probs=47.5
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEE
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~ 227 (534)
....|++.|||||+-.++...... .+|+--|-.|+ ||.=.++ ....++++++.+.+++.+..-+..
T Consensus 55 ~~d~ivvlGGDGtlL~~~~~~~~~----~~pilgin~G~-------lGFLt~~---~~~~~~~~~~~~~~~~~~~~~r~~ 120 (281)
T COG0061 55 KADLIVVLGGDGTLLRAARLLARL----DIPVLGINLGH-------LGFLTDF---EPDELEKALDALLEGEYRIEERLL 120 (281)
T ss_pred CceEEEEeCCcHHHHHHHHHhccC----CCCEEEEeCCC-------ccccccc---CHHHHHHHHHHHhcCceEEEEeEE
Confidence 345799999999999999877652 34544445552 3332211 235788999999988777777777
Q ss_pred Eeee
Q 009462 228 ILMR 231 (534)
Q Consensus 228 V~~~ 231 (534)
+...
T Consensus 121 l~~~ 124 (281)
T COG0061 121 LEVS 124 (281)
T ss_pred EEEE
Confidence 7643
No 50
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=78.07 E-value=9.5 Score=40.38 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=51.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhcc---CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~---~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
++++|+..+..-. .+.+.+.+.|.. ..++.+....+.+.++.+.+.++.+.+.+ ..+...||++||
T Consensus 24 ~k~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~------~~r~d~IIaiGG- 92 (344)
T cd08169 24 DQYFFISDSGVAD----LIAHYIAEYLSKILPVHILVIEGGEEYKTFETVTRILERAIALG------ANRRTAIVAVGG- 92 (344)
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHhhcCceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-
Confidence 6777877754422 355666666643 23333333223333332222222222111 122456777776
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC--CCccch
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 190 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDl 190 (534)
|++..+...+... ....+|+-.||. ++++|-
T Consensus 93 Gsv~D~ak~vA~~-~~rgip~i~VPTTlla~~ds 125 (344)
T cd08169 93 GATGDVAGFVAST-LFRGIAFIRVPTTLLAQSDS 125 (344)
T ss_pred cHHHHHHHHHHHH-hccCCcEEEecCCccccccc
Confidence 8888888776542 124678999997 677763
No 51
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=75.27 E-value=13 Score=34.97 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=45.3
Q ss_pred CCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc
Q 009462 92 SGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD 170 (534)
Q Consensus 92 SGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~ 170 (534)
+|+..-....++.+..|....+ |++.........+++..-++.+... .-...|.++|+++-+.-|+.++..
T Consensus 7 ~gs~SD~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~~~~~~~~~~--------~~~viIa~AG~~a~Lpgvva~~t~ 78 (150)
T PF00731_consen 7 MGSTSDLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLLEFVKEYEAR--------GADVIIAVAGMSAALPGVVASLTT 78 (150)
T ss_dssp ESSGGGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHTTTT--------TESEEEEEEESS--HHHHHHHHSS
T ss_pred eCCHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHhccC--------CCEEEEEECCCcccchhhheeccC
Confidence 3555556677788888877666 7765533332222233322211110 113568999999999999988764
Q ss_pred CCCCCCCCEEEeeCCCc
Q 009462 171 LKLPHSPPVATVPLGTG 187 (534)
Q Consensus 171 ~~l~~~~plgiIPlGTG 187 (534)
.|.||+ |.-++
T Consensus 79 -----~PVIgv-P~~~~ 89 (150)
T PF00731_consen 79 -----LPVIGV-PVSSG 89 (150)
T ss_dssp -----S-EEEE-EE-ST
T ss_pred -----CCEEEe-ecCcc
Confidence 466776 87665
No 52
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=73.17 E-value=20 Score=37.50 Aligned_cols=44 Identities=27% Similarity=0.366 Sum_probs=27.3
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC--C--CCCCCCEEEeeC--CCccchhh
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDL--K--LPHSPPVATVPL--GTGNNIPF 192 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~--~--l~~~~plgiIPl--GTGNDlAR 192 (534)
+...||++|| |++..+...+.-+ . ....+|+..||. |||--...
T Consensus 78 ~~d~IiaiGG-Gs~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t~ 127 (332)
T cd08180 78 KPDIVIALGG-GSAIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVTS 127 (332)
T ss_pred CCCEEEEECC-chHHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhCC
Confidence 3467888998 6766666644211 1 123578999995 77755444
No 53
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase. 2-hydroxyethylphosphonate (2-HEP), the presumed product of the reaction of Pald with an alcohol dehydrogenase, is a biologically novel but reasonable analog of 2-AEP and may be a constituent of as-yet undescribed natural products. In the case of Azoarcus, downstream of the dehydrogenase is a CDP-glycerol:glycerophosphate transferase homolog that may indicate the existence of a pathway for 2-HEP-derived phosphonolipid biosynthesis.
Probab=73.17 E-value=21 Score=37.82 Aligned_cols=102 Identities=19% Similarity=0.128 Sum_probs=51.9
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEcCchH
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAGGDGT 160 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~-~~~~~IIv~GGDGT 160 (534)
++++|+..+.. ....+++.+...|....++......|..-++.+.+..+.+ ++. .+...||++|| |+
T Consensus 24 ~r~lvVtd~~~---~~~g~~~~v~~~L~~~~~~~~~~v~~~pt~~~v~~~~~~~--------~~~~~~~D~IIaiGG-GS 91 (355)
T TIGR03405 24 RRVVVVTFPEA---RALGLARRLEALLGGRLAALIDDVAPNPDVAQLDGLYARL--------WGDEGACDLVIALGG-GS 91 (355)
T ss_pred CeEEEEECcch---hhcchHHHHHHHhccCcEEEeCCCCCCcCHHHHHHHHHHH--------HhcCCCCCEEEEeCC-cc
Confidence 67888776533 2224566677777543332222222222222222222211 111 12457888888 77
Q ss_pred HHHHHHHHhcC---C----------------CCCCCCEEEeeC--CCccchhhccC
Q 009462 161 ASWLLGVVSDL---K----------------LPHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 161 V~~Vl~~l~~~---~----------------l~~~~plgiIPl--GTGNDlAR~LG 195 (534)
+..+...+.-. . ....+|+..||. |||-...+.--
T Consensus 92 viD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~P~IaVPTTagTGSE~t~~av 147 (355)
T TIGR03405 92 VIDTAKVLAVGLRRGEFDLLLQLLRNGRDFAPTARLPLVAIPTTAGTGSEVTPWAT 147 (355)
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHhcCCccCCCCCCCEEEEcCCCcchhhhcCeEE
Confidence 77666544221 0 113568888896 78876665543
No 54
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol
Probab=71.63 E-value=14 Score=39.07 Aligned_cols=91 Identities=20% Similarity=0.308 Sum_probs=49.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~----qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+..+..-. .+.+.+++.|... .++.+....+.+-++.+.+.++.+.+.+ ..+...||++||
T Consensus 25 ~~~livtd~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIaiGG 94 (345)
T cd08195 25 SKILIVTDENVAP----LYLEKLKAALEAAGFEVEVIVIPAGEASKSLETLEKLYDALLEAG------LDRKSLIIALGG 94 (345)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCCCcCCHHHHHHHHHHHHHcC------CCCCCeEEEECC
Confidence 6788888766542 3566677766542 2333333233333333333333222110 112356777777
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
|++..+...+... ....+|+..||.
T Consensus 95 -Gsv~D~ak~vA~~-~~rgip~i~VPT 119 (345)
T cd08195 95 -GVVGDLAGFVAAT-YMRGIDFIQIPT 119 (345)
T ss_pred -hHHHhHHHHHHHH-HhcCCCeEEcch
Confidence 8888888776521 124678888885
No 55
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=70.98 E-value=17 Score=38.92 Aligned_cols=49 Identities=16% Similarity=0.239 Sum_probs=30.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCccchhhccCCC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFGWG 197 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~--------------~-l~~~~plgiIPl--GTGNDlAR~LGwg 197 (534)
+.+.||++|| |++..+...+.-+ . ....+|+..||. |||-...+.--+.
T Consensus 85 ~~D~IIavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagTgSe~t~~avi~ 150 (377)
T cd08176 85 GCDFIISIGG-GSPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTTAGTASEVTINYVIT 150 (377)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCCCcchhccCCcEEEE
Confidence 3457888888 7776666554210 0 124578999996 8887666655443
No 56
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=70.36 E-value=23 Score=37.82 Aligned_cols=123 Identities=15% Similarity=0.135 Sum_probs=56.7
Q ss_pred ccccCceeecCCc-ccccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHHHHhh
Q 009462 60 YYIPNYILVSGSE-VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFK 136 (534)
Q Consensus 60 ~~ip~~~~~~~~~-~~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qVfdL~~~~p~~al~~l~~~l~~l~ 136 (534)
|..|..++.-... ..... ...++++|+.-+.+-. ...+++.+.+.|... .+.......|..-.+.+.+.++.
T Consensus 2 ~~~p~~i~~G~g~l~~l~~-~~~~r~livt~~~~~~--~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~~~~v~~~~~~-- 76 (375)
T cd08179 2 FTLPRDIYFGKGSLEYLKT-LKGKKAFIVTGGGSMK--KFGFLDKVEAYLKEAGIEVEVFEGVEPDPSVETVLKGAEA-- 76 (375)
T ss_pred ccCCceEEECcCHHHHHHH-hcCCeEEEEeCchHHH--hCChHHHHHHHHHHcCCeEEEeCCCCCCcCHHHHHHHHHH--
Confidence 5567776654322 11111 1236677776544322 123455666666532 22222221222222222222221
Q ss_pred hccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C------------C---CCCCCCEEEeeC--CCccchhhccC
Q 009462 137 AAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L------------K---LPHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 137 ~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~---~------------~---l~~~~plgiIPl--GTGNDlAR~LG 195 (534)
+++ .+...||++|| |++..+...+.- . . ....+|+..||. |||--..+.--
T Consensus 77 ------~~~-~~~D~IIavGG-GSviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTtagTGSE~t~~av 147 (375)
T cd08179 77 ------MRE-FEPDWIIALGG-GSPIDAAKAMWIFYEYPELTFEDIVKPFTLPELRNKARFCAIPSTSGTATEVTAFSV 147 (375)
T ss_pred ------HHh-cCCCEEEEeCC-ccHHHHHHHHHHHHhCCCcCHHHHhccccccccCCCCCEEEeCCCCchhHhhCCeEE
Confidence 111 13457888888 666665554421 0 0 112468888896 78765554433
No 57
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed
Probab=69.24 E-value=18 Score=38.38 Aligned_cols=98 Identities=20% Similarity=0.211 Sum_probs=51.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q----VfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~G 156 (534)
.++++|+..+... ..+.+.+.+.|.... ++.+....+...++.+.+.++.+.+.+ ..+...||++|
T Consensus 31 ~~~~livtd~~~~----~~~~~~v~~~L~~~gi~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavG 100 (358)
T PRK00002 31 GKKVAIVTDETVA----PLYLEKLRASLEAAGFEVDVVVLPDGEQYKSLETLEKIYDALLEAG------LDRSDTLIALG 100 (358)
T ss_pred CCeEEEEECCchH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEc
Confidence 4678888865542 236667777765432 232333223322332323222221110 11235677777
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeC--CCccch
Q 009462 157 GDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 190 (534)
Q Consensus 157 GDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDl 190 (534)
| |++..+...+... ....+|+..||. ++.+|-
T Consensus 101 G-Gsv~D~aK~iA~~-~~~gip~i~IPTT~~s~~ds 134 (358)
T PRK00002 101 G-GVIGDLAGFAAAT-YMRGIRFIQVPTTLLAQVDS 134 (358)
T ss_pred C-cHHHHHHHHHHHH-hcCCCCEEEcCchhhhcccc
Confidence 6 8888888876521 124678999997 444443
No 58
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=68.00 E-value=31 Score=37.07 Aligned_cols=126 Identities=12% Similarity=0.124 Sum_probs=62.5
Q ss_pred cccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE--EEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV--fdL~~~~p~~al~~l~~~l 132 (534)
.|.+|++++.-... . ........++++|+.-+. -....+++.+++.|....+ .......|..-.+.+.+.+
T Consensus 5 ~~~~p~~i~~G~g~~~~l~~~~~~~g~~~~livt~~~---~~~~g~~~~v~~~L~~~~i~~~~f~~v~~np~~~~v~~~~ 81 (383)
T PRK09860 5 TFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNM---LTKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGL 81 (383)
T ss_pred ccccCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcc---hhhCccHHHHHHHHHHcCCeEEEeCCCCCCcCHHHHHHHH
Confidence 46678887765432 1 112222336777765421 1223356677777764432 2222222222222232322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C-----------C-CCCCCCEEEeeC--CCccchhhccC
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L-----------K-LPHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~---~-----------~-l~~~~plgiIPl--GTGNDlAR~LG 195 (534)
+. +++ .+...||++|| |++-.+..++.- . . ....+|+..||. |||-...+.--
T Consensus 82 ~~--------~~~-~~~D~IiaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTTagTGSE~t~~av 151 (383)
T PRK09860 82 KL--------LKE-NNCDSVISLGG-GSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCI 151 (383)
T ss_pred HH--------HHH-cCCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcCccCCCCCCEEEEeCCCcchhccCceEE
Confidence 21 111 23467888888 555555444321 0 0 123578999997 89977776655
Q ss_pred CC
Q 009462 196 WG 197 (534)
Q Consensus 196 wg 197 (534)
+.
T Consensus 152 i~ 153 (383)
T PRK09860 152 IT 153 (383)
T ss_pred EE
Confidence 53
No 59
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=65.89 E-value=23 Score=37.27 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=47.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--V--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+..+..- ..+.+.+.+.|.... + +.+....+..-++.+.+.++.+++.+ ..+...||++||
T Consensus 21 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavGG 90 (344)
T TIGR01357 21 SKLVIITDETVA----DLYADKLLEALQALGYNVLKLTVPDGEESKSLETVQRLYDQLLEAG------LDRSSTIIALGG 90 (344)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEcC
Confidence 678888765542 235666766665432 1 23332222222332323222221110 112356788877
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
|++..+...+... ....+|+..||.
T Consensus 91 -Gsv~D~aK~iA~~-~~~~~p~i~VPT 115 (344)
T TIGR01357 91 -GVVGDLAGFVAAT-YMRGIRFIQVPT 115 (344)
T ss_pred -hHHHHHHHHHHHH-HccCCCEEEecC
Confidence 8888888776521 124678999997
No 60
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=64.76 E-value=30 Score=35.96 Aligned_cols=37 Identities=32% Similarity=0.443 Sum_probs=26.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTG 187 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTG 187 (534)
...||++|| |++..+...+... ....+|+..||. |||
T Consensus 79 ~d~IIaiGG-Gs~~D~aK~ia~~-~~~~~p~i~iPTt~~tg 117 (332)
T cd07766 79 VDAVIAVGG-GSTLDTAKAVAAL-LNRGLPIIIVPTTAATG 117 (332)
T ss_pred cCEEEEeCC-chHHHHHHHHHHH-hcCCCCEEEEeCCCchh
Confidence 456777776 8888888776543 223689999996 555
No 61
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=64.40 E-value=33 Score=36.69 Aligned_cols=126 Identities=22% Similarity=0.240 Sum_probs=62.1
Q ss_pred cccccCceeecCCcc----cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSEV----QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~~----~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qVfdL~~~~p~~al~~l~~~l 132 (534)
.|..|..+..-.... ...... .++++|+.-+.+... ..+++.+.+.|... ++...+...+..-++.+...+
T Consensus 3 ~~~~p~~i~~G~g~~~~l~~~~~~~-~~r~livt~~~~~~~--~~~~~~v~~~L~~~g~~~~~~~~v~~~p~~~~v~~~~ 79 (382)
T cd08187 3 TFYNPTKIIFGKGTESELGKELKKY-GKKVLLVYGGGSIKK--NGLYDRVIASLKEAGIEVVELGGVEPNPRLETVREGI 79 (382)
T ss_pred eecCCCEEEECCCHHHHHHHHHHHh-CCEEEEEeCCcHHHh--cCcHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 355677666543220 111122 367777766555432 23456666666542 232222222222222222222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCccchhhccC
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~--------------~-l~~~~plgiIPl--GTGNDlAR~LG 195 (534)
+.++ + .+.+.||++|| |++..+...+.-+ + ....+|+-.||. |||--..+.--
T Consensus 80 ~~~~--------~-~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGsE~t~~av 149 (382)
T cd08187 80 ELCK--------E-EKVDFILAVGG-GSVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTLAATGSEMNGGAV 149 (382)
T ss_pred HHHH--------H-cCCCEEEEeCC-hHHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCCCchhhccCCCEE
Confidence 2111 1 23467898998 7777776654321 0 023578888895 78876665554
Q ss_pred CC
Q 009462 196 WG 197 (534)
Q Consensus 196 wg 197 (534)
+.
T Consensus 150 i~ 151 (382)
T cd08187 150 IT 151 (382)
T ss_pred Ee
Confidence 43
No 62
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=63.25 E-value=38 Score=35.87 Aligned_cols=47 Identities=23% Similarity=0.270 Sum_probs=30.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-------------C-CCCCCCEEEeeC--CCccchhhccCC
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDL-------------K-LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~-------------~-l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
...||++|| |++..+...+.-+ + ....+|+..||. |||...++.--+
T Consensus 84 ~D~IIavGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagTGsE~t~~avi 146 (357)
T cd08181 84 ADFVIGIGG-GSPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTTAGTGSEVTQYSVL 146 (357)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCCCcchhhhCCeEEE
Confidence 457888888 7777777654310 0 123578999996 888777765433
No 63
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=59.59 E-value=42 Score=35.93 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=52.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++|+..+.+-... .+++.+.+.|.... +.......|..-++.+.+.++.++ + .+...||++|| |
T Consensus 27 kr~livtd~~~~~~~--g~~~~v~~~L~~~gi~~~~f~~v~~~p~~~~v~~~~~~~~--------~-~~~D~IIaiGG-G 94 (383)
T cd08186 27 SKVLLVTGKSAYKKS--GAWDKVEPALDEHGIEYVLYNKVTPNPTVDQVDEAAKLGR--------E-FGAQAVIAIGG-G 94 (383)
T ss_pred CEEEEEcCccHHhhc--ChHHHHHHHHHHcCCeEEEeCCCCCCCCHHHHHHHHHHHH--------H-cCCCEEEEeCC-c
Confidence 678888776654322 23455555554332 222222222222222222222111 1 23457888888 7
Q ss_pred HHHHHHHHHhcC--------------C--CCCCCCEEEeeC--CCccchhhccCC
Q 009462 160 TASWLLGVVSDL--------------K--LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 160 TV~~Vl~~l~~~--------------~--l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
++..+...+.-. . ....+|+..||. |||...++.--+
T Consensus 95 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGSE~t~~avi 149 (383)
T cd08186 95 SPIDSAKSAAILLEHPGKTARDLYEFKFTPEKALPLIAINLTHGTGTEVDRFAVA 149 (383)
T ss_pred cHHHHHHHHHHHHhCCCCcHHHHhCCCcccCCCCCEEEEeCCChhhhhhCCeEEE
Confidence 777666554321 0 013468888997 898776665544
No 64
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=58.56 E-value=42 Score=35.93 Aligned_cols=124 Identities=14% Similarity=0.154 Sum_probs=60.4
Q ss_pred CcccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHH
Q 009462 58 NNYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLY 129 (534)
Q Consensus 58 ~~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~----qVfdL~~~~p~~al~~l~ 129 (534)
..|+.|+.++.-... . ........++++|+.-+..-. ..+++.+...|... .+|+-.+..|. .+.+.
T Consensus 3 ~~~~~~~~i~~G~g~l~~l~~~~~~~g~~~~lvvtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~v~~~p~--~~~v~ 77 (382)
T PRK10624 3 NRMILNETAYFGRGAIGALTDEVKRRGFKKALIVTDKTLVK---CGVVAKVTDVLDAAGLAYEIYDGVKPNPT--IEVVK 77 (382)
T ss_pred ccccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEeCcchhh---CcchHHHHHHHHHCCCeEEEeCCCCCCcC--HHHHH
Confidence 457778877664322 1 111222336788877643221 12455566666432 23431112232 22222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C--------------CCCCCCCEEEeeC--CCccch
Q 009462 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L--------------KLPHSPPVATVPL--GTGNNI 190 (534)
Q Consensus 130 ~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~---~--------------~l~~~~plgiIPl--GTGNDl 190 (534)
+.++.+ ++ .+...||++|| |++..+...+.- . .....+|+..||. |||--.
T Consensus 78 ~~~~~~--------~~-~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTTagTGse~ 147 (382)
T PRK10624 78 EGVEVF--------KA-SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGVAPTKKPSVPIIAIPTTAGTAAEV 147 (382)
T ss_pred HHHHHH--------Hh-cCCCEEEEeCC-hHHHHHHHHHHHHHHCCCCCCHHHHhCcCcccCCCCCEEEECCCCchhhhh
Confidence 222111 11 13456888888 677766654321 0 0113478889996 788666
Q ss_pred hhccCC
Q 009462 191 PFSFGW 196 (534)
Q Consensus 191 AR~LGw 196 (534)
.+..-+
T Consensus 148 t~~avi 153 (382)
T PRK10624 148 TINYVI 153 (382)
T ss_pred cceeee
Confidence 665544
No 65
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=58.53 E-value=63 Score=34.04 Aligned_cols=92 Identities=20% Similarity=0.136 Sum_probs=52.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EE-EeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fd-L~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++|+..+.+ ...+.+.+++.|....+ +. .....+.+.++++...+ + + .+...||++|| |
T Consensus 24 ~~~liv~d~~~----~~~~~~~l~~~L~~~~~~~~~~~~~p~~~~v~~~~~~~---~--------~-~~~D~iIavGG-G 86 (347)
T cd08172 24 KRPLIVTGPRS----WAAAKPYLPESLAAGEAFVLRYDGECSEENIERLAAQA---K--------E-NGADVIIGIGG-G 86 (347)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHhcCeEEEEEeCCCCCHHHHHHHHHHH---H--------h-cCCCEEEEeCC-c
Confidence 67888887666 23567777777743333 11 12122222222222211 1 1 13456888887 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeC--CCccchhhc
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlAR~ 193 (534)
++..+...+... ..+|+..||. |||-..++.
T Consensus 87 s~~D~aK~ia~~---~~~p~i~VPTT~gtgse~t~~ 119 (347)
T cd08172 87 KVLDTAKAVADR---LGVPVITVPTLAATCAAWTPL 119 (347)
T ss_pred HHHHHHHHHHHH---hCCCEEEecCccccCccccee
Confidence 988888877643 2578888886 677665543
No 66
>PRK15138 aldehyde reductase; Provisional
Probab=58.02 E-value=48 Score=35.69 Aligned_cols=124 Identities=19% Similarity=0.204 Sum_probs=59.5
Q ss_pred cccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 134 (534)
Q Consensus 59 ~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~ 134 (534)
.|..|..++.-... . ..... .++++|+.-+.|= ....++..+.+.|....+.......|..-.+.+.+..+.
T Consensus 5 ~~~~P~~i~~G~g~~~~l~~~l~~--~~~~livt~~~~~--~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~ 80 (387)
T PRK15138 5 NLHTPTRILFGKGAIAGLREQIPA--DARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPTYETLMKAVKL 80 (387)
T ss_pred EEeCCceEEECcCHHHHHHHHHhc--CCeEEEECCCchH--HhcCcHHHHHHHhcCCeEEEECCccCCCCHHHHHHHHHH
Confidence 35567777665422 1 11112 2567776543331 223456677777754433222222222222222222221
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC----------------C--CCCCCCEEEeeC--CCccchhhcc
Q 009462 135 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL----------------K--LPHSPPVATVPL--GTGNNIPFSF 194 (534)
Q Consensus 135 l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~----------------~--l~~~~plgiIPl--GTGNDlAR~L 194 (534)
+++ .+...||++|| |++..+...+.-+ . ....+|+..||. |||-.....-
T Consensus 81 --------~~~-~~~D~IIaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~iaVPTTaGTGSE~t~~a 150 (387)
T PRK15138 81 --------VRE-EKITFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILETGGKEIKSAIPMGSVLTLPATGSESNAGA 150 (387)
T ss_pred --------HHH-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHHhccCCCcCCCCCEEEEecCCccccccCCCE
Confidence 111 23467898998 5555444433210 0 113468888896 8887666554
Q ss_pred CC
Q 009462 195 GW 196 (534)
Q Consensus 195 Gw 196 (534)
-+
T Consensus 151 vi 152 (387)
T PRK15138 151 VI 152 (387)
T ss_pred EE
Confidence 44
No 67
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=57.70 E-value=63 Score=34.55 Aligned_cols=125 Identities=13% Similarity=0.102 Sum_probs=60.2
Q ss_pred cccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p~~al~~l~~~l 132 (534)
+|.+|+.++.-... . ........++++|+.-+..- ...+++.++..|.... +.......|..-++.+.+..
T Consensus 3 ~~~~p~~i~fG~g~l~~l~~~l~~~g~~r~lvvt~~~~~---~~g~~~~v~~~L~~~~i~~~~~~~v~~~p~~~~v~~~~ 79 (379)
T TIGR02638 3 RLILNETSYFGAGAIEDIVDEVKRRGFKKALVVTDKDLI---KFGVADKVTDLLDEAGIAYELFDEVKPNPTITVVKAGV 79 (379)
T ss_pred cccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcchh---hccchHHHHHHHHHCCCeEEEECCCCCCcCHHHHHHHH
Confidence 46778877765422 1 11122234678887764321 1225566666665432 22222222222222222222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---------------C--CCCCCCEEEeeC--CCccchhhc
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---------------K--LPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~---------------~--l~~~~plgiIPl--GTGNDlAR~ 193 (534)
+. +++ .+...||++|| |++..+..++.-+ . ....+|+..||. |||-...+.
T Consensus 80 ~~--------~~~-~~~D~IiaiGG-GSviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagTGse~t~~ 149 (379)
T TIGR02638 80 AA--------FKA-SGADYLIAIGG-GSPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTTAGTAAEVTIN 149 (379)
T ss_pred HH--------HHh-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCCCchhhhhCCE
Confidence 21 111 23457888888 6766666443210 0 013478888886 777655555
Q ss_pred cCC
Q 009462 194 FGW 196 (534)
Q Consensus 194 LGw 196 (534)
.-+
T Consensus 150 avi 152 (379)
T TIGR02638 150 YVI 152 (379)
T ss_pred EEE
Confidence 443
No 68
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=57.08 E-value=57 Score=34.36 Aligned_cols=95 Identities=16% Similarity=0.055 Sum_probs=51.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV---fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
++++|+.-+.+ ...+++.+...|....+ |+.....|. .+.+.+.++. +++ .+...||++||
T Consensus 23 ~r~livt~~~~----~~~~~~~v~~~L~~~~i~~~~~~~~~~p~--~~~v~~~~~~--------~~~-~~~D~IIavGG- 86 (351)
T cd08170 23 KRALIIADEFV----LDLVGAKIEESLAAAGIDARFEVFGGECT--RAEIERLAEI--------ARD-NGADVVIGIGG- 86 (351)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHHhCCCeEEEEEeCCcCC--HHHHHHHHHH--------Hhh-cCCCEEEEecC-
Confidence 66777653222 22567777777765432 332222222 1222222211 111 23457899988
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC--CCccchhhccC
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlAR~LG 195 (534)
|++..+...+.-. ..+|+..||. |||--.+..-.
T Consensus 87 GS~iD~aK~ia~~---~~~P~iaIPTTagTgse~t~~av 122 (351)
T cd08170 87 GKTLDTAKAVADY---LGAPVVIVPTIASTDAPTSALSV 122 (351)
T ss_pred chhhHHHHHHHHH---cCCCEEEeCCccccCcccccceE
Confidence 7888777776542 3578888896 77765555433
No 69
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=57.07 E-value=44 Score=35.45 Aligned_cols=47 Identities=21% Similarity=0.274 Sum_probs=29.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCccchhhccCC
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~---------------l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
...||++|| |++..+...+.-.- ....+|+..||. |||--..+...+
T Consensus 81 ~d~IiaiGG-Gs~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~~avi 144 (370)
T cd08551 81 CDGVIAVGG-GSVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTPFAVI 144 (370)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCCeEEE
Confidence 456888888 77776666553210 013578999997 677555555444
No 70
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=56.82 E-value=5.7 Score=41.65 Aligned_cols=62 Identities=23% Similarity=0.266 Sum_probs=37.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEe--eCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCcee
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATV--PLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiI--PlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~ 221 (534)
-+.||-+|||||.--...-+.+ +..|.|||= |.|+---+ -++..|+. ++..+|..+..|.-.
T Consensus 106 aD~VisvGGDGTfL~Aasrv~~---~~~PViGvNtDP~~Seg~l----cL~~~~~~----n~~~al~k~~sgnF~ 169 (395)
T KOG4180|consen 106 ADMVISVGGDGTFLLAASRVID---DSKPVIGVNTDPTGSEGHL----CLPDKYPS----NPAGALCKLTSGNFE 169 (395)
T ss_pred hhEEEEecCccceeehhhhhhc---cCCceeeecCCCCcCcceE----eccccCCC----CcHHHHHHHHhccHH
Confidence 3569999999998777763333 246777763 55544322 24444442 455667776666543
No 71
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases (Fe-ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown. They are mainly found in bacteria.
Probab=55.84 E-value=45 Score=35.57 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=49.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~----qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+..+.+. .++.+...|... .+|+.. ..|. .+.+.+.++.. ++ .+...||++||
T Consensus 23 ~r~livtd~~~~------~~~~v~~~L~~~g~~~~~~~~~-~~p~--~~~v~~~~~~~--------~~-~~~D~IIaiGG 84 (374)
T cd08183 23 RRVLLVTGASSL------RAAWLIEALRAAGIEVTHVVVA-GEPS--VELVDAAVAEA--------RN-AGCDVVIAIGG 84 (374)
T ss_pred CcEEEEECCchH------HHHHHHHHHHHcCCeEEEecCC-CCcC--HHHHHHHHHHH--------Hh-cCCCEEEEecC
Confidence 677888766553 555666666542 235432 2332 22222222211 11 23457888888
Q ss_pred chHHHHHHHHHhcC------------C-------CCCCCCEEEeeC--CCccchhhccC
Q 009462 158 DGTASWLLGVVSDL------------K-------LPHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 158 DGTV~~Vl~~l~~~------------~-------l~~~~plgiIPl--GTGNDlAR~LG 195 (534)
|++..+...+.-+ . ....+|+..||. |||.-..+.--
T Consensus 85 -GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGSE~t~~av 142 (374)
T cd08183 85 -GSVIDAGKAIAALLPNPGSVLDYLEGVGRGLPLDGPPLPFIAIPTTAGTGSEVTKNAV 142 (374)
T ss_pred -chHHHHHHHHHHHHcCCCCHHHHHhccCccccCCCCCCCEEEecCCCchhHHhCCeEE
Confidence 7777666554311 0 013568888885 67766555433
No 72
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=55.37 E-value=72 Score=34.04 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=48.6
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q----VfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+..+.+- . ..+++.+.+.|.... +|+-....|. ++.+.+.++.++ + .+...||++||
T Consensus 24 ~r~livt~~~~~-~--~g~~~~v~~~L~~~gi~~~~~~~v~~~p~--~~~v~~~~~~~~--------~-~~~D~IIaiGG 89 (375)
T cd08194 24 KRPLIVTDKVMV-K--LGLVDKLTDSLKKEGIESAIFDDVVSEPT--DESVEEGVKLAK--------E-GGCDVIIALGG 89 (375)
T ss_pred CeEEEEcCcchh-h--cchHHHHHHHHHHCCCeEEEECCCCCCcC--HHHHHHHHHHHH--------h-cCCCEEEEeCC
Confidence 577787765443 1 124556666665432 2332222222 222223222111 1 23456888888
Q ss_pred chHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCccchhhc
Q 009462 158 DGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 158 DGTV~~Vl~~l~~~--------------~-l~~~~plgiIPl--GTGNDlAR~ 193 (534)
|++..+...+.-+ . ....+|+..||. |||--..+.
T Consensus 90 -GS~~D~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagtGsE~t~~ 141 (375)
T cd08194 90 -GSPIDTAKAIAVLATNGGSIRDYKGPRIVDKPGLPLIAIPTTAGTGSEVTRF 141 (375)
T ss_pred -chHHHHHHHHHHHHhCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCe
Confidence 7777766655310 0 123578888896 666554433
No 73
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH, EC 1.1.1.261) plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids. It catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. The activity is zinc-dependent. One characteristic feature of archaea is that their cellular membrane has an ether linkage between the glycerol backbone and the hydrocarbon residues. The polar lipids of the members of Archaea consist of di- and tetraethers of glycerol with isoprenoid alcohols bound at the sn-2 and sn-3 positions of the glycerol moiety. The archaeal polar lipids have the enantiomeric configuration of a glycerophosph
Probab=55.11 E-value=52 Score=34.52 Aligned_cols=87 Identities=16% Similarity=0.121 Sum_probs=47.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC-cEEEEeecCc-hhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAP-DKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~-qVfdL~~~~p-~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++|+..+... ..+.+.+...|... .+.......| .+.++++...+ + + .+...||++|| |
T Consensus 26 ~~~liv~d~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~---~--------~-~~~d~iIaiGG-G 88 (339)
T cd08173 26 GRVLVVTGPTTK----SIAGKKVEALLEDEGEVDVVIVEDATYEEVEKVESSA---R--------D-IGADFVIGVGG-G 88 (339)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHh---h--------h-cCCCEEEEeCC-c
Confidence 677888765543 24566667666543 2221222222 22222222221 1 1 13456888887 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCcc
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTGN 188 (534)
++..+...+.-. ..+|+..||.=.|+
T Consensus 89 s~~D~aK~~a~~---~~~p~i~iPTT~~t 114 (339)
T cd08173 89 RVIDVAKVAAYK---LGIPFISVPTAASH 114 (339)
T ss_pred hHHHHHHHHHHh---cCCCEEEecCcccC
Confidence 999888877632 36789999965443
No 74
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=54.77 E-value=40 Score=35.57 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=28.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCccchhhc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlAR~ 193 (534)
...||++|| |++..+...+... ..+|+..||. |||-..++.
T Consensus 78 ~d~IIavGG-Gs~~D~aK~ia~~---~~~p~i~VPTtagtgse~t~~ 120 (349)
T cd08550 78 ADVIIGVGG-GKTLDTAKAVADR---LDKPIVIVPTIASTCAASSNL 120 (349)
T ss_pred CCEEEEecC-cHHHHHHHHHHHH---cCCCEEEeCCccccCccccce
Confidence 456888887 8888888877542 3578889996 666554443
No 75
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=54.02 E-value=49 Score=35.22 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=23.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
..||++|| |++.-+...+..+ ....+|+..||.
T Consensus 90 d~IVaiGG-G~v~D~ak~~A~~-~~rg~p~i~VPT 122 (354)
T cd08199 90 EPVLAIGG-GVLTDVAGLAASL-YRRGTPYVRIPT 122 (354)
T ss_pred CEEEEECC-cHHHHHHHHHHHH-hcCCCCEEEEcC
Confidence 45666666 8988888877632 124678888887
No 76
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=52.97 E-value=47 Score=35.32 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=60.9
Q ss_pred CcccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E-EEEeecCch-hHHHHHH
Q 009462 58 NNYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAPD-KVLHQLY 129 (534)
Q Consensus 58 ~~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--V-fdL~~~~p~-~al~~l~ 129 (534)
+.|.+|+.++.-... . ....... ++++||.-+.+- ..+.+.+...|.... + |+.....|. +.++.+.
T Consensus 3 ~~f~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~ep~~~~v~~~~ 77 (366)
T PRK09423 3 RIFISPSKYVQGKGALARLGEYLKPLG-KRALVIADEFVL----GIVGDRVEASLKEAGLTVVFEVFNGECSDNEIDRLV 77 (366)
T ss_pred ccccCCceEEECCCHHHHHHHHHHHcC-CEEEEEEChhHH----HHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHH
Confidence 456778877764322 1 1111222 677777754432 236677777775432 2 432222222 2222222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCccchhhc
Q 009462 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 130 ~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlAR~ 193 (534)
..+ ++ .+...||++|| |++..+...+.-. ..+|+..||. |||--....
T Consensus 78 ~~~-----------~~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPTtagtgSe~t~~ 127 (366)
T PRK09423 78 AIA-----------EE-NGCDVVIGIGG-GKTLDTAKAVADY---LGVPVVIVPTIASTDAPTSAL 127 (366)
T ss_pred HHH-----------Hh-cCCCEEEEecC-hHHHHHHHHHHHH---cCCCEEEeCCccccCccccCc
Confidence 111 11 13467888888 8888888777542 3578888897 555544443
No 77
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=52.48 E-value=3 Score=39.03 Aligned_cols=14 Identities=43% Similarity=0.878 Sum_probs=11.6
Q ss_pred EEcCchHHHHHHHH
Q 009462 154 VAGGDGTASWLLGV 167 (534)
Q Consensus 154 v~GGDGTV~~Vl~~ 167 (534)
-.|||||++|+-+.
T Consensus 130 gdGGDGT~hW~Yd~ 143 (180)
T PLN00180 130 GDGGDGTGHWVYER 143 (180)
T ss_pred ccCCCCceeeEeeh
Confidence 45999999998754
No 78
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion]
Probab=51.95 E-value=1.1e+02 Score=33.23 Aligned_cols=125 Identities=18% Similarity=0.192 Sum_probs=66.7
Q ss_pred CcccccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHH
Q 009462 58 NNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLY 129 (534)
Q Consensus 58 ~~~~ip~~~~~~~~~-~~---~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q----VfdL~~~~p~~al~~l~ 129 (534)
..|++|+.++.-... .. .......++++|+.-|. -....+++.+.+.|.... ||+=. .|+.-.+.+.
T Consensus 2 ~~~~~p~~i~fG~g~l~~l~~~~~~~g~~r~liVTd~~---~~~~g~~~~v~~~L~~~~i~~~if~~v--~p~P~~~~v~ 76 (377)
T COG1454 2 NWFYLPTEILFGRGSLKELGEEVKRLGAKRALIVTDRG---LAKLGLLDKVLDSLDAAGIEYEVFDEV--EPEPTIETVE 76 (377)
T ss_pred cccccCceEEecCChHHHHHHHHHhcCCCceEEEECCc---cccchhHHHHHHHHHhcCCeEEEecCC--CCCCCHHHHH
Confidence 346678887765433 11 11222336788877654 233446777777777655 45422 2333223233
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---C------------CCCCCCEEEee--CCCccchhh
Q 009462 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVP--LGTGNNIPF 192 (534)
Q Consensus 130 ~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~---~------------l~~~~plgiIP--lGTGNDlAR 192 (534)
..++..+ ..+...||+.|| |++..+..++.-+ . -...+|+-.|| .|||..-.+
T Consensus 77 ~~~~~~~---------~~~~D~iIalGG-GS~~D~AK~i~~~~~~~~~~~~~~~i~~~~~~~~plIaIPTTaGTGSEvT~ 146 (377)
T COG1454 77 AGAEVAR---------EFGPDTIIALGG-GSVIDAAKAIALLAENPGSVLDYEGIGKVKKPKAPLIAIPTTAGTGSEVTP 146 (377)
T ss_pred HHHHHHH---------hcCCCEEEEeCC-ccHHHHHHHHHHHhhCCchhhhhcccccccCCCCCEEEecCCCcchhhhcC
Confidence 3332211 124567888888 6666555544211 0 01236777788 588877777
Q ss_pred ccCCC
Q 009462 193 SFGWG 197 (534)
Q Consensus 193 ~LGwg 197 (534)
.--+.
T Consensus 147 ~aVit 151 (377)
T COG1454 147 FAVIT 151 (377)
T ss_pred eEEEE
Confidence 66554
No 79
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=51.29 E-value=77 Score=33.84 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=53.3
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++|+.-+.+- ....+++.+.+.|.... +.......|..-.+.+.+..+. +++ .+...||++|| |
T Consensus 26 ~r~livt~~~~~--~~~g~~~~v~~~L~~~~~~~~~~~~v~~~p~~~~v~~~~~~--------~~~-~~~D~IiavGG-G 93 (380)
T cd08185 26 KKALIVTGNGSS--KKTGYLDRVIELLKQAGVEVVVFDKVEPNPTTTTVMEGAAL--------ARE-EGCDFVVGLGG-G 93 (380)
T ss_pred CeEEEEeCCCch--hhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHH--------HHH-cCCCEEEEeCC-c
Confidence 788888876552 12345666666665432 2211221222222222222211 111 23457888888 6
Q ss_pred HHHHHHHHHhcC-------------------C-CCCCCCEEEeeC--CCccchhhccCCC
Q 009462 160 TASWLLGVVSDL-------------------K-LPHSPPVATVPL--GTGNNIPFSFGWG 197 (534)
Q Consensus 160 TV~~Vl~~l~~~-------------------~-l~~~~plgiIPl--GTGNDlAR~LGwg 197 (534)
++..+...+.-+ . ....+|+..||. |||.-..+.-.+.
T Consensus 94 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi~ 153 (380)
T cd08185 94 SSMDTAKAIAFMAANEGDYWDYIFGGTGKGKPPPEKALPIIAITTTAGTGSEADPWAVIT 153 (380)
T ss_pred cHHHHHHHHHHHhhCCCCHHHHhcccccccccCCCCCCCEEEEcCCChhhhccCCeEEEE
Confidence 766666554221 0 113578999994 8887776665543
No 80
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=50.57 E-value=59 Score=33.96 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=29.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 192 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR 192 (534)
..+|++|||||+.-+... .+. ..+++--||.=--||+.-
T Consensus 93 d~Li~IGGdgs~~~a~~L-~e~---~~i~vigiPkTIDNDl~~ 131 (301)
T TIGR02482 93 EGLVVIGGDGSYTGAQKL-YEE---GGIPVIGLPGTIDNDIPG 131 (301)
T ss_pred CEEEEeCCchHHHHHHHH-HHh---hCCCEEeecccccCCCcC
Confidence 469999999998766533 221 257788899999999983
No 81
>PLN02834 3-dehydroquinate synthase
Probab=50.04 E-value=56 Score=35.85 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=48.7
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccC----cEEEEe--ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEE
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLG--EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIV 154 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~----qVfdL~--~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv 154 (534)
.++++||..+... ..+.+.+.+.|... .+++.. ...+.+.++.+.+.++.+.+.+ ......||+
T Consensus 100 g~rvlIVtD~~v~----~~~~~~v~~~L~~~g~~~~v~~~v~~~gE~~ksl~~v~~~~~~l~~~~------~dr~~~VIA 169 (433)
T PLN02834 100 GKRVLVVTNETVA----PLYLEKVVEALTAKGPELTVESVILPDGEKYKDMETLMKVFDKALESR------LDRRCTFVA 169 (433)
T ss_pred CCEEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEEEecCCcCCCCHHHHHHHHHHHHhcC------CCcCcEEEE
Confidence 3778888876543 23666677777543 334322 2112222332333322222111 112335777
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009462 155 AGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (534)
Q Consensus 155 ~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlG 185 (534)
+|| |++..+...+... ....+|+..||.-
T Consensus 170 iGG-Gsv~D~ak~~A~~-y~rgiplI~VPTT 198 (433)
T PLN02834 170 LGG-GVIGDMCGFAAAS-YQRGVNFVQIPTT 198 (433)
T ss_pred ECC-hHHHHHHHHHHHH-hcCCCCEEEECCc
Confidence 777 8888888765421 1246899999983
No 82
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=48.82 E-value=22 Score=39.40 Aligned_cols=57 Identities=30% Similarity=0.378 Sum_probs=38.4
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCccchh---hccCCCCCCCCCchHHHHHHHHHHH
Q 009462 150 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP---FSFGWGKKNPNTDQQAVLSFLEQVK 216 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~---~l~~~~l~~~~plgiIPlGTGNDlA---R~LGwg~~~~~~~~~~~~~~L~~I~ 216 (534)
..++++|||||..-+.. .+.+. ...+++--||-==-||+. +++|..+ +++.+.+.|.
T Consensus 178 ~~L~vIGGdgT~~~A~~L~ee~~~~--g~~I~VIGIPKTIDNDI~~td~S~GFdT--------Av~~~~~aI~ 240 (459)
T PTZ00286 178 NILFTLGGDGTHRGALAIYKELRRR--KLNISVVGIPKTIDNDIPIIDESFGFQT--------AVEEAQNAIR 240 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHh--CCCceEEEeccccCCCCCCcccCcCchH--------HHHHHHHHHH
Confidence 36999999999875543 33322 235888889999999997 5566553 5555554443
No 83
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=48.82 E-value=83 Score=33.02 Aligned_cols=88 Identities=19% Similarity=0.225 Sum_probs=47.2
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCc-hhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAP-DKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p-~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
++++|+..+. ....+++.+.+.|.... +|+-....| .+.++.+...+ + + .+...||++||
T Consensus 24 ~~~livt~~~----~~~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~v~~~~~~~---~--------~-~~~d~IIaiGG- 86 (337)
T cd08177 24 SRALVLTTPS----LATKLAERVASALGDRVAGTFDGAVMHTPVEVTEAAVAAA---R--------E-AGADGIVAIGG- 86 (337)
T ss_pred CeEEEEcChH----HHHHHHHHHHHHhccCCcEEeCCCCCCCCHHHHHHHHHHH---H--------h-cCCCEEEEeCC-
Confidence 5677765432 22236777788776543 343111222 22222222211 1 1 23456888887
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC-CCccc
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPL-GTGNN 189 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPl-GTGND 189 (534)
|++..+...+.-. ..+|+..||. -||--
T Consensus 87 Gs~iD~aK~ia~~---~~~p~i~IPTtatgse 115 (337)
T cd08177 87 GSTIDLAKAIALR---TGLPIIAIPTTLSGSE 115 (337)
T ss_pred cHHHHHHHHHHHH---hcCCEEEEcCCchhhh
Confidence 8999888877542 2578888884 35543
No 84
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=48.06 E-value=59 Score=34.31 Aligned_cols=37 Identities=35% Similarity=0.484 Sum_probs=28.4
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..+|++|||||+.-+. .|.+ ..+++--||.==-||++
T Consensus 96 d~LivIGGdgS~~~a~-~L~~----~gi~vigiPkTIDNDl~ 132 (324)
T TIGR02483 96 DALIAIGGDGTLGIAR-RLAD----KGLPVVGVPKTIDNDLE 132 (324)
T ss_pred CEEEEECCchHHHHHH-HHHh----cCCCEEeeccccCCCCc
Confidence 3699999999986554 4444 24777778988899997
No 85
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=48.04 E-value=53 Score=34.58 Aligned_cols=37 Identities=27% Similarity=0.331 Sum_probs=26.4
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCcc
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGN 188 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGN 188 (534)
+...||++|| |++..+...+... ..+|+..||. |||-
T Consensus 78 ~~d~iiavGG-Gs~~D~aK~ia~~---~~~p~i~VPTt~gtgs 116 (345)
T cd08171 78 EADMIFAVGG-GKAIDTVKVLADK---LGKPVFTFPTIASNCA 116 (345)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHH---cCCCEEEecCccccCc
Confidence 3457888888 8888888777542 2578888886 5554
No 86
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=47.69 E-value=82 Score=33.59 Aligned_cols=47 Identities=19% Similarity=0.322 Sum_probs=27.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC----------------CCCCCCEEEeeC--CCccchhhccCC
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLK----------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~----------------l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
...||++|| |++..+...+.-+- ....+|+..||. |||-...+.--+
T Consensus 84 ~d~IIaiGG-GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGsE~t~~avi 148 (374)
T cd08189 84 CDAILAVGG-GSVIDCAKAIAARAANPKKSLRKLTGLLKVKKPLPPLFAIPTTAGTGSEVTIAAVI 148 (374)
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHhCCCCCHHHHhCccccCCCCCCEEEEECCCccccccCCeEEE
Confidence 456888888 67666665442210 012368888885 777665555433
No 87
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=47.59 E-value=28 Score=34.97 Aligned_cols=57 Identities=30% Similarity=0.553 Sum_probs=37.8
Q ss_pred EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCc
Q 009462 113 VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 113 VfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTG 187 (534)
+||....+ +++++..+.+++.. .....|+|+|=||++-.|+.+|.+ +|+--+|.-+|
T Consensus 150 ~~DvGVAG----iHRLl~~l~r~~~~--------~~~~lIVvAGMEGaLPsvvagLvD------~PVIavPTsVG 206 (254)
T COG1691 150 VYDVGVAG----IHRLLSALKRLKIE--------DADVLIVVAGMEGALPSVVAGLVD------VPVIAVPTSVG 206 (254)
T ss_pred EEeeccch----HHhhhhHHHHHHhh--------CCCeEEEEcccccchHHHHHhccC------CCeEecccccc
Confidence 47765433 45566654443321 134579999999999999999975 45555687766
No 88
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=47.21 E-value=80 Score=34.10 Aligned_cols=126 Identities=16% Similarity=0.166 Sum_probs=59.8
Q ss_pred CcccccCceeecCCcc----cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EE-EeecCchhHHHHHHHH
Q 009462 58 NNYYIPNYILVSGSEV----QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVT 131 (534)
Q Consensus 58 ~~~~ip~~~~~~~~~~----~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fd-L~~~~p~~al~~l~~~ 131 (534)
..|..|+.++.-.... ........+.++|+.-+ + -....+++.+.+.|....+ +. .....|..-.+.+.+.
T Consensus 22 ~~f~~P~~i~fG~g~~~~l~~~~~~~g~~~~lvv~~~-~--~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~P~~~~v~~~ 98 (395)
T PRK15454 22 KTFSVPPVTLCGPGAVSSCGQQAQTRGLKHLFVMADS-F--LHQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAA 98 (395)
T ss_pred ceeecCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCc-c--hhhCccHHHHHHHHHHcCCeEEEECCCCCCcCHHHHHHH
Confidence 4677888887654321 11122233555554322 1 1223456667777764432 11 1111222222222222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---C------------CCCCCCEEEeeC--CCccchhhcc
Q 009462 132 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNNIPFSF 194 (534)
Q Consensus 132 l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~---~------------l~~~~plgiIPl--GTGNDlAR~L 194 (534)
++. +++ .+.+.||++|| |++-.+..++.-. . ....+|+..||. |||-...+.-
T Consensus 99 ~~~--------~r~-~~~D~IiavGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTtaGTGSE~t~~a 168 (395)
T PRK15454 99 VAQ--------LRE-SGCDGVIAFGG-GSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVT 168 (395)
T ss_pred HHH--------HHh-cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCccHHHHhcccccCCCCCEEEECCCCcchhhhCCeE
Confidence 221 111 24467888888 5555444433110 0 113468888896 8887666655
Q ss_pred CC
Q 009462 195 GW 196 (534)
Q Consensus 195 Gw 196 (534)
-+
T Consensus 169 vi 170 (395)
T PRK15454 169 VI 170 (395)
T ss_pred EE
Confidence 44
No 89
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=45.98 E-value=90 Score=33.17 Aligned_cols=45 Identities=29% Similarity=0.408 Sum_probs=26.5
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCC-------------------CCCCCCEEEeeC--CCccchhhc
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLK-------------------LPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~-------------------l~~~~plgiIPl--GTGNDlAR~ 193 (534)
+...||++|| |++..+...+.-+. ....+|+..||. |||--..+.
T Consensus 81 ~~d~IIaiGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 146 (370)
T cd08192 81 GCDGVIAFGG-GSALDLAKAVALMAGHPGPLWDYEDIEGGWPRITDAIPPLIAIPTTAGTGSEVGRA 146 (370)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhcccccccccCCCCCCEEEecCCCchhhhhCCc
Confidence 3457888888 77777666543210 012468888886 666444433
No 90
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=44.98 E-value=11 Score=34.81 Aligned_cols=14 Identities=64% Similarity=1.021 Sum_probs=11.2
Q ss_pred CcEEEEEcCchHHH
Q 009462 149 RLRLIVAGGDGTAS 162 (534)
Q Consensus 149 ~~~IIv~GGDGTV~ 162 (534)
..|+|+||||||-+
T Consensus 85 gQRlIvsGGegtss 98 (160)
T PF12219_consen 85 GQRLIVSGGEGTSS 98 (160)
T ss_dssp G-EEEEESSSSSSG
T ss_pred ccEEEEeCCCCccc
Confidence 35899999999954
No 91
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=44.84 E-value=83 Score=33.61 Aligned_cols=47 Identities=21% Similarity=0.293 Sum_probs=28.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHh---cC-----------CC-CCCCCEEEeeC--CCccchhhccC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVS---DL-----------KL-PHSPPVATVPL--GTGNNIPFSFG 195 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~---~~-----------~l-~~~~plgiIPl--GTGNDlAR~LG 195 (534)
+...||++|| |++..+...+. .. +. ...+|+..||. |||--.++.-.
T Consensus 85 ~~d~IIaiGG-GsviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT~gTgSE~t~~av 148 (377)
T cd08188 85 GCDVIIAVGG-GSPIDCAKGIGIVASNGGHILDFEGVDKITRPLPPLICIPTTAGSGADVSQFAI 148 (377)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCeEE
Confidence 3467888888 66666664331 10 00 12468889996 88876666433
No 92
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=43.42 E-value=78 Score=33.33 Aligned_cols=37 Identities=30% Similarity=0.464 Sum_probs=29.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||+.-+. .|.+. .+++--||-==-||+.
T Consensus 94 d~Li~IGGdgs~~~a~-~L~e~----~i~vigiPkTIDNDi~ 130 (317)
T cd00763 94 DALVVIGGDGSYMGAM-RLTEH----GFPCVGLPGTIDNDIP 130 (317)
T ss_pred CEEEEECCchHHHHHH-HHHHc----CCCEEEecccccCCCC
Confidence 3699999999987665 34442 5788888999999998
No 93
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed
Probab=43.16 E-value=1e+02 Score=32.63 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=26.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 189 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGND 189 (534)
...||++|| |++..+...+.- ...+|+-.||.=-++|
T Consensus 88 ~d~IIaiGG-Gsv~D~ak~vA~---~rgip~I~IPTT~~td 124 (350)
T PRK00843 88 AGFLIGVGG-GKVIDVAKLAAY---RLGIPFISVPTAASHD 124 (350)
T ss_pred CCEEEEeCC-chHHHHHHHHHH---hcCCCEEEeCCCccCC
Confidence 356888887 899998887753 2467899999644444
No 94
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=43.14 E-value=69 Score=33.72 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=25.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlG 185 (534)
+...||++|| |++..+...+.-+ ..+|+-.||.=
T Consensus 80 ~~d~IIaIGG-Gs~~D~aK~vA~~---~~~p~i~IPTT 113 (348)
T cd08175 80 DTDLIIAVGS-GTINDITKYVSYK---TGIPYISVPTA 113 (348)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHh---cCCCEEEecCc
Confidence 3467888888 8888888877643 35788888964
No 95
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP). Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) with either NADH or NADPH as a cofactor. NADH is the preferred cofactor. PnAA is a biosynthetic intermediate for several phosphonates such as the antibiotic fosfomycin, phosphinothricin tripeptide (PTT), and 2-aminoethylphosphonate (AEP). This enzyme is named PhpC in PTT biosynthesis pathway in Streptomyces hygroscopicus and S. viridochromogenes. Members of this family are only found in bacteria.
Probab=41.05 E-value=1.5e+02 Score=31.50 Aligned_cols=44 Identities=20% Similarity=0.370 Sum_probs=26.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-----------------C--CCCCCCEEEeeC--CCccchhhc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDL-----------------K--LPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~-----------------~--l~~~~plgiIPl--GTGNDlAR~ 193 (534)
...||++|| |++..+...+.-. . ....+|+..||. |||--.+..
T Consensus 78 ~D~IIavGG-Gs~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 142 (367)
T cd08182 78 PDAVLAVGG-GSVLDTAKALAALLGAPREALEDLRIRNKERENRERALPLIAIPTTAGTGSEVTPF 142 (367)
T ss_pred cCEEEEeCC-cHHHHHHHHHHHHHhCCCcHHHHHHHhccCCCCCCCCCCEEEeCCCCCchhhhCCE
Confidence 356888887 7777766655321 0 113578888886 666544443
No 96
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=40.77 E-value=1.6e+02 Score=31.36 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=46.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV 161 (534)
++++++..+.-. ....+.+++.|....++.+....+.+.++.+.+.++.+.+.+ ..+...||++|| |++
T Consensus 20 ~r~lIVtD~~v~----~l~~~~l~~~L~~~~~~~~~~~e~~k~l~~v~~~~~~~~~~~------~~r~d~iIaiGG-Gsv 88 (346)
T cd08196 20 ENDVFIVDANVA----ELYRDRLDLPLDAAPVIAIDATEENKSLEAVSSVIESLRQNG------ARRNTHLVAIGG-GII 88 (346)
T ss_pred CeEEEEECccHH----HHHHHHHHHHhcCCeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-hHH
Confidence 677888776542 236667777775444443333333333333333332222111 122346777776 888
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC
Q 009462 162 SWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 162 ~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
..+...+..+ ....+++-.||.
T Consensus 89 ~D~ak~vA~~-~~rgi~~i~iPT 110 (346)
T cd08196 89 QDVTTFVASI-YMRGVSWSFVPT 110 (346)
T ss_pred HHHHHHHHHH-HHcCCCeEEecc
Confidence 8887766431 123456666664
No 97
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=40.64 E-value=1.7e+02 Score=30.47 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=26.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCcc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGN 188 (534)
...||++|| |++..+...+... ..+|+..||.=-++
T Consensus 76 ~d~iIaiGG-Gsv~D~aK~vA~~---~~~p~i~vPTt~~t 111 (331)
T cd08174 76 VDAVVGIGG-GKVIDVAKYAAFL---RGIPLSVPTTNLND 111 (331)
T ss_pred CCEEEEeCC-cHHHHHHHHHHhh---cCCCEEEecCcccc
Confidence 456888887 8999998887652 46889999974443
No 98
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=40.55 E-value=30 Score=38.15 Aligned_cols=48 Identities=29% Similarity=0.391 Sum_probs=31.7
Q ss_pred cEEEEEcCchHHHHHHHHHhcCC-CCCCCCEEEeeCCCccchh---hccCCC
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLK-LPHSPPVATVPLGTGNNIP---FSFGWG 197 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~-l~~~~plgiIPlGTGNDlA---R~LGwg 197 (534)
..++++|||||+.-+...-...+ ....+++--||-==-||+. +++|..
T Consensus 174 ~~L~vIGGdgT~~gA~~l~ee~~~~g~~I~VIGIPKTIDNDi~~td~S~GFd 225 (443)
T PRK06830 174 NILFVIGGDGTLRGASAIAEEIERRGLKISVIGIPKTIDNDINFIQKSFGFE 225 (443)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHhCCCceEEEeccccCCCCcCcccCCCHH
Confidence 36999999999875554222110 1235788888988899997 445544
No 99
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the iron-containing alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. Members of this family are mainly found in bacteria.
Probab=40.54 E-value=1.3e+02 Score=31.85 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=27.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-----------C----CCCCCCEEEeeC--CCccchhhccCC
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDL-----------K----LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~-----------~----l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
.+.||++|| |++-.+...+.-+ . ....+|+..||. |||--..+.--+
T Consensus 82 ~D~IIaiGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~PlIaVPTTaGTGSE~t~~aVi 145 (347)
T cd08184 82 PCAIVGIGG-GSTLDVAKAVSNMLTNPGSAEDYQGWDLVKNPAVYKIGIPTLSGTGAEASRTAVL 145 (347)
T ss_pred CCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhcccccccCCCCcEEEEeCCCccccccCCcEEE
Confidence 467888888 6666555544211 0 012467888995 888766555433
No 100
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=40.52 E-value=1.4e+02 Score=32.28 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=48.8
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEEe-------ecCch-hHHHHHHHHHHHhhhccchhhhhhcc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLG-------EKAPD-KVLHQLYVTLEKFKAAGDVFASEIEK 148 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q----VfdL~-------~~~p~-~al~~l~~~l~~l~~~~d~~a~~~~~ 148 (534)
.++++||..+.--. ....+++.+.+.|.... +|+.. ...|. +....+...+. .. ...+
T Consensus 42 ~~r~liVtD~~v~~-~~~~l~~~v~~~L~~~g~~~~~~~~~~~~~~ge~~k~~~~~v~~i~~~~~---~~------~~dr 111 (389)
T PRK06203 42 PKKVLVVIDSGVLR-AHPDLLEQITAYFAAHADVLELVAEPLVVPGGEAAKNDPALVEALHAAIN---RH------GIDR 111 (389)
T ss_pred CCeEEEEECchHHH-hhhhHHHHHHHHHHhcCCceeeeeeEEEccCCccCCCcHHHHHHHHHHHH---Hc------CCCC
Confidence 36788888755432 11236677777775432 23321 11232 22333333322 10 1123
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
...||++|| |++..+...+..+ ....+|+-.||.
T Consensus 112 ~d~IIaiGG-Gsv~D~ak~iA~~-~~rgip~I~IPT 145 (389)
T PRK06203 112 HSYVLAIGG-GAVLDMVGYAAAT-AHRGVRLIRIPT 145 (389)
T ss_pred CceEEEeCC-cHHHHHHHHHHHH-hcCCCCEEEEcC
Confidence 346778877 8888888776532 124678888995
No 101
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=38.96 E-value=79 Score=33.43 Aligned_cols=99 Identities=20% Similarity=0.106 Sum_probs=51.6
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhcc--Cc--EEEEeecC-chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNE--NQ--VIDLGEKA-PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~--~q--VfdL~~~~-p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
+++||..+ +- ....+.+.+...|.. .+ +|+-.... +...+ .+.++.++. .+...||++||
T Consensus 23 r~lvVt~~-~~--~~~~~~~~v~~~L~~~~i~~~~~~~~~~~p~~~~v---~~~~~~~~~---------~~~D~IIaiGG 87 (366)
T PF00465_consen 23 RVLVVTDP-SL--SKSGLVDRVLDALEEAGIEVQVFDGVGPNPTLEDV---DEAAEQARK---------FGADCIIAIGG 87 (366)
T ss_dssp EEEEEEEH-HH--HHHTHHHHHHHHHHHTTCEEEEEEEESSS-BHHHH---HHHHHHHHH---------TTSSEEEEEES
T ss_pred CEEEEECc-hH--HhCccHHHHHHHHhhCceEEEEEecCCCCCcHHHH---HHHHHHHHh---------cCCCEEEEcCC
Confidence 88888887 43 223367778877733 22 35422222 22222 222221111 23467999988
Q ss_pred chHHHHHHHHHh---cCC-------------CCCCCCEEEeeC--CCccchhhccCCC
Q 009462 158 DGTASWLLGVVS---DLK-------------LPHSPPVATVPL--GTGNNIPFSFGWG 197 (534)
Q Consensus 158 DGTV~~Vl~~l~---~~~-------------l~~~~plgiIPl--GTGNDlAR~LGwg 197 (534)
|++..+...+. ... ....+|+..||. |||-.+.+...+.
T Consensus 88 -GS~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~avi~ 144 (366)
T PF00465_consen 88 -GSVMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPYAVIY 144 (366)
T ss_dssp -HHHHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSEEEEE
T ss_pred -CCcCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCcccccccccccccc
Confidence 55555544432 211 012378999996 6776666665543
No 102
>PLN02564 6-phosphofructokinase
Probab=38.67 E-value=40 Score=37.54 Aligned_cols=40 Identities=28% Similarity=0.344 Sum_probs=28.1
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~---~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||+.-+.. .+.+. ..++++.-||-==-||+.
T Consensus 178 d~LivIGGDGS~~gA~~L~e~~~~~--g~~i~VIGIPKTIDNDI~ 220 (484)
T PLN02564 178 NQVYIIGGDGTQKGASVIYEEIRRR--GLKVAVAGIPKTIDNDIP 220 (484)
T ss_pred CEEEEECCchHHHHHHHHHHHHHHc--CCCceEEEecccccCCCc
Confidence 36999999999875543 33222 234567778988899997
No 103
>PRK14072 6-phosphofructokinase; Provisional
Probab=37.76 E-value=89 Score=34.19 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=28.1
Q ss_pred cEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~---l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..+|++|||||+.-+... +.+. ..++++--||-==-||+.
T Consensus 105 d~LivIGGdgS~~~a~~L~e~~~~~--g~~i~vIgIPkTIDNDl~ 147 (416)
T PRK14072 105 GYFFYNGGNDSMDTALKVSQLAKKM--GYPIRCIGIPKTIDNDLP 147 (416)
T ss_pred CEEEEECChHHHHHHHHHHHHHHHh--CCCceEEEeeecccCCCC
Confidence 469999999998755432 2111 234788888977799998
No 104
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=37.71 E-value=93 Score=32.97 Aligned_cols=42 Identities=24% Similarity=0.215 Sum_probs=28.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcC-CCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDL-KLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~-~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||+.-+...-... +-...+++--||-=--||+.
T Consensus 94 ~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 94 DALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeecccCCCc
Confidence 3699999999987654322211 11235888888977799987
No 105
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=36.99 E-value=1.2e+02 Score=28.73 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=42.1
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeec----CchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHH
Q 009462 93 GGQLGGKLLLTYRSLLNENQV-IDLGEK----APDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGV 167 (534)
Q Consensus 93 Gg~~g~~ll~~~~~~L~~~qV-fdL~~~----~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~ 167 (534)
|+..-....+.....|....| ||+... .|....+ +.+..+ +..-...|.++|+.+-+.-|+.+
T Consensus 6 GS~SD~~~~~~a~~~L~~~gi~~dv~V~SaHRtp~~~~~-~~~~a~-----------~~g~~viIa~AG~aa~Lpgvva~ 73 (156)
T TIGR01162 6 GSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLE-YAKEAE-----------ERGIKVIIAGAGGAAHLPGMVAA 73 (156)
T ss_pred CcHhhHHHHHHHHHHHHHcCCCeEEEEECcccCHHHHHH-HHHHHH-----------HCCCeEEEEeCCccchhHHHHHh
Confidence 333344556666666665555 666443 3333222 222211 00112457788999999999887
Q ss_pred HhcCCCCCCCCEEEeeCCCc
Q 009462 168 VSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 168 l~~~~l~~~~plgiIPlGTG 187 (534)
+.. .|.||+ |.-++
T Consensus 74 ~t~-----~PVIgv-P~~~~ 87 (156)
T TIGR01162 74 LTP-----LPVIGV-PVPSK 87 (156)
T ss_pred ccC-----CCEEEe-cCCcc
Confidence 653 355554 77654
No 106
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=35.31 E-value=2.4e+02 Score=30.38 Aligned_cols=48 Identities=21% Similarity=0.256 Sum_probs=29.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC----------------C----------CCCCCCEEEeeC--CCccchhhccCC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDL----------------K----------LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~----------------~----------l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
+...||++|| |++..+...+.-+ . ....+|+..||. |||-..++..-+
T Consensus 78 ~~D~IIaiGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~I~VPTTagTGSE~t~~avi 153 (398)
T cd08178 78 KPDTIIALGG-GSPMDAAKIMWLFYEHPEVDFEDLAQKFMDIRKRIYKFPKLGKKAKLVAIPTTSGTGSEVTPFAVI 153 (398)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHHhCCCcchhHhhhhhcccccccccccccCCCCCEEEeCCCCcccccccCeEEE
Confidence 3467898998 6666665544310 0 013468889996 788766555443
No 107
>PRK03202 6-phosphofructokinase; Provisional
Probab=34.95 E-value=1.2e+02 Score=32.00 Aligned_cols=38 Identities=32% Similarity=0.410 Sum_probs=29.5
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 192 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR 192 (534)
..+|++|||||+.-+.. |.+ ..+++--||-==-||+.-
T Consensus 95 d~Li~IGGd~s~~~a~~-L~e----~~i~vigiPkTIDNDl~g 132 (320)
T PRK03202 95 DALVVIGGDGSYMGAKR-LTE----HGIPVIGLPGTIDNDIAG 132 (320)
T ss_pred CEEEEeCChHHHHHHHH-HHh----cCCcEEEecccccCCCCC
Confidence 46999999999987654 443 257888899888999983
No 108
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=33.65 E-value=2.5e+02 Score=30.28 Aligned_cols=93 Identities=16% Similarity=0.218 Sum_probs=49.9
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCc----EE----EEeec---Cch-hHHHHHHHHHHHhhhccchhhhhhcc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VI----DLGEK---APD-KVLHQLYVTLEKFKAAGDVFASEIEK 148 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q----Vf----dL~~~---~p~-~al~~l~~~l~~l~~~~d~~a~~~~~ 148 (534)
.++++|+.++.-.. ....+.+.+...|.... +| .+..+ .+. +.++.+...+ .+. ...+
T Consensus 30 ~~r~lvVtD~~v~~-~~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~ge~~k~~~~~v~~i~~~l---~~~------~~~r 99 (369)
T cd08198 30 RPKVLVVIDSGVAQ-ANPQLASDIQAYAAAHADALRLVAPPHIVPGGEACKNDPDLVEALHAAI---NRH------GIDR 99 (369)
T ss_pred CCeEEEEECcchHH-hhhhHHHHHHHHHHhcCCceeeeeeeEecCCCccCCChHHHHHHHHHHH---HHc------CCCc
Confidence 46788888866543 21235667777665322 22 11121 221 2222233322 111 1223
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlG 185 (534)
...||+.|| |++..+...+... ....+|+-.||.=
T Consensus 100 ~~~IIalGG-G~v~D~ag~vA~~-~~rGip~I~IPTT 134 (369)
T cd08198 100 HSYVIAIGG-GAVLDAVGYAAAT-AHRGVRLIRIPTT 134 (369)
T ss_pred CcEEEEECC-hHHHHHHHHHHHH-hcCCCCEEEECCC
Confidence 346888887 9999999877643 2346888888954
No 109
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.82 E-value=1.1e+02 Score=28.52 Aligned_cols=60 Identities=17% Similarity=0.247 Sum_probs=39.0
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHc
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~ 217 (534)
..-+.++|+- ...++..+..+ ...++-+-+|=+|| ||+.+.... ..-.+++.++++.+..
T Consensus 43 ~~n~g~~G~t-~~~~~~~l~~~-~~~~pd~Vii~~G~-ND~~~~~~~-----~~~~~~l~~li~~i~~ 102 (191)
T cd01836 43 WRLFAKTGAT-SADLLRQLAPL-PETRFDVAVISIGV-NDVTHLTSI-----ARWRKQLAELVDALRA 102 (191)
T ss_pred EEEEecCCcC-HHHHHHHHHhc-ccCCCCEEEEEecc-cCcCCCCCH-----HHHHHHHHHHHHHHHh
Confidence 3567888884 56667766552 23577899999996 788753221 1123567788888876
No 110
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=30.91 E-value=1.4e+02 Score=28.95 Aligned_cols=67 Identities=18% Similarity=0.305 Sum_probs=36.6
Q ss_pred CcEEEEEcCchHHH--HHHHHHhcCCCCCCCCEEEe---------eCCCccchhhccCCCCCC--CCCchHHHHHHHHHH
Q 009462 149 RLRLIVAGGDGTAS--WLLGVVSDLKLPHSPPVATV---------PLGTGNNIPFSFGWGKKN--PNTDQQAVLSFLEQV 215 (534)
Q Consensus 149 ~~~IIv~GGDGTV~--~Vl~~l~~~~l~~~~plgiI---------PlGTGNDlAR~LGwg~~~--~~~~~~~~~~~L~~I 215 (534)
..+|++.=|||+++ .+.+++........+.+.|+ |.+...+.++.+||.... .+.+..++.++++..
T Consensus 97 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~~~~li~vvdnN~~~~~~~~~~~~~~~~a~G~~~~~~vdG~d~~~l~~a~~~a 176 (195)
T cd02007 97 KRKVIAVIGDGALTGGMAFEALNNAGYLKSNMIVILNDNEMSISPNVGTPGNLFEELGFRYIGPVDGHNIEALIKVLKEV 176 (195)
T ss_pred CCeEEEEEcccccccChHHHHHHHHHHhCCCEEEEEECCCcccCCCCCCHHHHHHhcCCCccceECCCCHHHHHHHHHHH
Confidence 45799999999987 33333322111111222222 333556778889997643 344555555555543
No 111
>PLN02884 6-phosphofructokinase
Probab=30.15 E-value=1.3e+02 Score=33.03 Aligned_cols=42 Identities=29% Similarity=0.303 Sum_probs=28.4
Q ss_pred cEEEEEcCchHHHHHHHHHhcC-CCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDL-KLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~-~l~~~~plgiIPlGTGNDlA 191 (534)
..+|++|||||+.-+...-... +....+++--||-==-||+.
T Consensus 145 d~LivIGGdgS~~~a~~L~~~~~~~g~~i~vIGIPkTIDNDi~ 187 (411)
T PLN02884 145 NMLFVLGGNGTHAGANAIHNECRKRKMKVSVVGVPKTIDNDIL 187 (411)
T ss_pred CEEEEECCchHHHHHHHHHHHHHHcCCCceEEeccccccCCCc
Confidence 3699999999987554322110 01134788888988899986
No 112
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=29.84 E-value=2.4e+02 Score=30.24 Aligned_cols=88 Identities=23% Similarity=0.305 Sum_probs=54.5
Q ss_pred cccccCceeecCCcc-cccC-CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhh
Q 009462 59 NYYIPNYILVSGSEV-QRSS-LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFK 136 (534)
Q Consensus 59 ~~~ip~~~~~~~~~~-~~~~-~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~ 136 (534)
.|..|..++....+- .... ...-.+|++.+---| -+..-+..+....|...+++.+..-.|...++.+.+.++
T Consensus 5 ~y~nPTki~FGkg~i~~l~~ei~~~~kVLi~YGGGS--IKrnGvydqV~~~Lkg~~~~E~~GVEPNP~~~Tv~kaV~--- 79 (384)
T COG1979 5 TYHNPTKILFGKGQIAELREEIPKDAKVLIVYGGGS--IKKNGVYDQVVEALKGIEVIEFGGVEPNPRLETLMKAVE--- 79 (384)
T ss_pred cccCCceEEecCchHHHHHhhccccCeEEEEecCcc--ccccchHHHHHHHhcCceEEEecCCCCCchHHHHHHHHH---
Confidence 467799998876441 1111 112278888885222 233346788888888888898877667776666666553
Q ss_pred hccchhhhhhccCcEEEEEcC
Q 009462 137 AAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 137 ~~~d~~a~~~~~~~~IIv~GG 157 (534)
+.++ ++-.-|+++||
T Consensus 80 -----i~ke-e~idflLAVGG 94 (384)
T COG1979 80 -----ICKE-ENIDFLLAVGG 94 (384)
T ss_pred -----HHHH-cCceEEEEecC
Confidence 2222 12235888888
No 113
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=28.61 E-value=29 Score=37.41 Aligned_cols=57 Identities=26% Similarity=0.402 Sum_probs=36.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCce
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE 220 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~ 220 (534)
+.||..||||||--+...... .-|||--.-+|| ||.=. -.+-.+.++.|..|.+++.
T Consensus 170 D~iItLGGDGTvL~aS~LFq~----~VPPV~sFslGs-------lGFLt---pf~f~~f~~~l~~v~~~~~ 226 (409)
T KOG2178|consen 170 DLIITLGGDGTVLYASSLFQR----SVPPVLSFSLGS-------LGFLT---PFPFANFQEQLARVLNGRA 226 (409)
T ss_pred eEEEEecCCccEEEehhhhcC----CCCCeEEeecCC-------ccccc---cccHHHHHHHHHHHhcCcc
Confidence 369999999998665554433 236665555554 44322 1234678888999998874
No 114
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=27.96 E-value=2.6e+02 Score=29.81 Aligned_cols=44 Identities=27% Similarity=0.334 Sum_probs=26.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--------------CC-CCCCCEEEeeC--CCccchhhc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDL--------------KL-PHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~--------------~l-~~~~plgiIPl--GTGNDlAR~ 193 (534)
...||++|| |++..+...+.-+ +. ...+|+..||. |||-.....
T Consensus 84 ~D~IIaiGG-Gs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgSe~t~~ 144 (376)
T cd08193 84 ADGVIGFGG-GSSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTTAGTGSEVTPI 144 (376)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCCCcchHhhCCe
Confidence 457888888 7777776655321 00 13568888885 666554444
No 115
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=27.46 E-value=1.2e+02 Score=34.89 Aligned_cols=45 Identities=16% Similarity=0.292 Sum_probs=31.0
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCccchh-----hccCCC
Q 009462 151 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP-----FSFGWG 197 (534)
Q Consensus 151 ~IIv~GGDGTV~~Vl~---~l~~~~l~~~~plgiIPlGTGNDlA-----R~LGwg 197 (534)
.+|++|||||..-+.- .+.+. ...+++--||-==-||+. .++|.+
T Consensus 176 ~LvvIGGddS~~~A~~Lae~~~~~--~~~i~VIGIPKTIDNDL~~~~td~s~GFd 228 (610)
T PLN03028 176 GLVIIGGVTSNTDAAQLAETFAEA--KCKTKVVGVPVTLNGDLKNQFVETNVGFD 228 (610)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHc--CCCceEEEeceeeeCCCCCCCCCCCcCHH
Confidence 6999999999765532 22221 235778888987799997 455554
No 116
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=27.33 E-value=68 Score=29.43 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=34.7
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcC
Q 009462 151 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (534)
Q Consensus 151 ~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a 218 (534)
.-...+|+. ..+++..+...-....|.+.+|=+|| ||+.+.. +. ..-...+.++++.+...
T Consensus 26 ~N~Gi~G~~-~~~~~~~~~~~~~~~~p~~vvi~~G~-ND~~~~~--~~---~~~~~~~~~lv~~i~~~ 86 (171)
T cd04502 26 VNRGFGGST-LADCLHYFDRLVLPYQPRRVVLYAGD-NDLASGR--TP---EEVLRDFRELVNRIRAK 86 (171)
T ss_pred eecCcccch-HHHHHHHHHhhhccCCCCEEEEEEec-CcccCCC--CH---HHHHHHHHHHHHHHHHH
Confidence 345667774 44555544432223467899999997 7875432 21 11234566777777653
No 117
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=27.25 E-value=1.4e+02 Score=32.62 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=28.6
Q ss_pred cEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~---l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||..-+... +.+. ...+++--||-==-||++
T Consensus 114 d~Li~IGGdgS~~~a~~L~~~~~~~--g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 114 DILHTIGGDDTNTTAADLAAYLAEN--GYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred CEEEEECChhHHHHHHHHHHHHHHh--CCCceEEEeeeeeeCCCC
Confidence 369999999998755432 2221 125788888998899996
No 118
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=26.98 E-value=2.2e+02 Score=29.82 Aligned_cols=34 Identities=29% Similarity=0.252 Sum_probs=25.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlG 185 (534)
+...||++|| |++..+...+.-. ..+|+-.||.=
T Consensus 80 ~~d~IIaiGG-Gsv~D~aK~iA~~---~gip~I~VPTT 113 (332)
T cd08549 80 DTEFLLGIGS-GTIIDLVKFVSFK---VGKPFISVPTA 113 (332)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHH---cCCCEEEeCCC
Confidence 3456888888 8999888877632 46789999963
No 119
>PRK14071 6-phosphofructokinase; Provisional
Probab=26.68 E-value=2.2e+02 Score=30.46 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=28.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..+|++|||||+.-+ ..|.+. ..+++--||-==-||+.
T Consensus 109 d~Li~IGGdgS~~~a-~~L~~~---~~i~vIgiPkTIDNDl~ 146 (360)
T PRK14071 109 DALIGIGGDGSLAIL-RRLAQQ---GGINLVGIPKTIDNDVG 146 (360)
T ss_pred CEEEEECChhHHHHH-HHHHHh---cCCcEEEecccccCCCc
Confidence 369999999998643 444431 26788888988899986
No 120
>PRK10586 putative oxidoreductase; Provisional
Probab=25.93 E-value=3e+02 Score=29.40 Aligned_cols=39 Identities=21% Similarity=0.217 Sum_probs=26.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCccchh
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 191 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlA 191 (534)
.+.||++|| |++..+...+... ..+|+..||. |||.-.+
T Consensus 87 ~d~iiavGG-Gs~iD~aK~~a~~---~~~p~i~vPT~a~t~s~~s 127 (362)
T PRK10586 87 RQVVIGVGG-GALLDTAKALARR---LGLPFVAIPTIAATCAAWT 127 (362)
T ss_pred CCEEEEecC-cHHHHHHHHHHhh---cCCCEEEEeCCcccccccc
Confidence 356777877 7777777777542 3678999997 4554333
No 121
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=25.75 E-value=1.2e+02 Score=34.30 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=28.0
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCccchhh
Q 009462 151 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIPF 192 (534)
Q Consensus 151 ~IIv~GGDGTV~~Vl~~---l~~~~l~~~~plgiIPlGTGNDlAR 192 (534)
.+|++|||||..-+... +.+. ..++++--||-==-||+..
T Consensus 164 ~LviIGGdgS~~~A~~Lae~~~~~--g~~i~VIGIPkTIDNDl~~ 206 (539)
T TIGR02477 164 GLVIIGGDDSNTNAALLAEYFAKH--GLKTQVIGVPKTIDGDLKN 206 (539)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhc--CCCceEEEEeeeecCCCCC
Confidence 69999999997655432 2221 2357777789877999975
No 122
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=25.11 E-value=1.7e+02 Score=33.26 Aligned_cols=71 Identities=18% Similarity=0.392 Sum_probs=41.4
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCccchh-----hccCCCCCCCCCchHHHHHHHHHH-HcCcee
Q 009462 151 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP-----FSFGWGKKNPNTDQQAVLSFLEQV-KNAKEM 221 (534)
Q Consensus 151 ~IIv~GGDGTV~~Vl~~---l~~~~l~~~~plgiIPlGTGNDlA-----R~LGwg~~~~~~~~~~~~~~L~~I-~~a~~~ 221 (534)
.+|++|||||..-+... +.+. ...+++--||-==-||+. .++|..+ -.+...+++..| .++...
T Consensus 167 ~LviIGGd~S~~~A~~Lae~~~~~--~~~i~VIGIPkTIDNDl~~~~id~s~GFdT-----A~~~~~~~I~~i~~Da~s~ 239 (555)
T PRK07085 167 GLVIIGGDDSNTNAAILAEYFAKH--GCKTQVIGVPKTIDGDLKNEFIETSFGFDT-----ATKTYSEMIGNISRDALSA 239 (555)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCccEEEEeeeecCCCCCCcccccCCHHH-----HHHHHHHHHHHHHHHHHhc
Confidence 59999999997755432 2221 236788888988899997 3555543 122233455555 333222
Q ss_pred eEeEEEEe
Q 009462 222 QIDSWHIL 229 (534)
Q Consensus 222 ~iD~w~V~ 229 (534)
. .+|.+.
T Consensus 240 ~-~~~~~V 246 (555)
T PRK07085 240 K-KYWHFI 246 (555)
T ss_pred C-CcEEEE
Confidence 2 456654
No 123
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit. Nearly every member of this protein family is the beta subunit, or else the C-terminal region, of sulfopyruvate decarboxylase, in an archaeal species capable of coenzyme M biosynthesis. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=23.73 E-value=2.1e+02 Score=27.35 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=41.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCC-CCEEEe------------eCCC--ccc---hhhccCCCCCCCCCchHHHHH
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHS-PPVATV------------PLGT--GNN---IPFSFGWGKKNPNTDQQAVLS 210 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~-~plgiI------------PlGT--GND---lAR~LGwg~~~~~~~~~~~~~ 210 (534)
..+||+.-|||+...-++.|........ +.+-|| +..+ .-| +|+++||.....-.+..+++.
T Consensus 59 ~~~Vv~i~GDG~f~m~~~el~ta~~~~~~pv~~vV~NN~~yg~~~~q~~~~~~~~d~~~lA~a~G~~~~~~v~~~~~l~~ 138 (181)
T TIGR03846 59 DRTVIVIDGDGSLLMNLGVLPTIAAESPKNLILVILDNGAYGSTGNQPTPASRRTDLELVAKAAGIRNVEKVADEEELRD 138 (181)
T ss_pred CCcEEEEEcchHHHhhhhHHHHHHHhCCCCeEEEEEeCCccccccCcCCCCCCCCCHHHHHHHCCCCeEEEeCCHHHHHH
Confidence 4469999999998866665543211111 222332 2222 113 688999874320123466777
Q ss_pred HHHHHHcCceeeEeE
Q 009462 211 FLEQVKNAKEMQIDS 225 (534)
Q Consensus 211 ~L~~I~~a~~~~iD~ 225 (534)
+|+.+....+.-||+
T Consensus 139 al~a~~~~~p~li~v 153 (181)
T TIGR03846 139 ALKALAMKGPTFIHV 153 (181)
T ss_pred HHHHHcCCCCEEEEE
Confidence 787444444565555
No 124
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=23.55 E-value=3.7e+02 Score=28.77 Aligned_cols=48 Identities=25% Similarity=0.228 Sum_probs=29.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCccchhhccCC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~---------------l~~~~plgiIPl--GTGNDlAR~LGw 196 (534)
+...||++|| |++..+...+.-+- ....+|+..||. |||-...+.--+
T Consensus 79 ~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi 143 (386)
T cd08191 79 GPDVIIGLGG-GSCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTTAGTGSEVTPVAVL 143 (386)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCCCcchhhhCCeEEE
Confidence 3457888888 77777776553210 012578888885 777666665433
No 125
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=22.41 E-value=4.6e+02 Score=31.37 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=43.7
Q ss_pred cccccCceeecCCc-ccccC-CCCCCeEEEEEcCCCCCCChhhHHHHHHHHhc--cC--cEEEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE-VQRSS-LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLN--EN--QVIDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~-~~~~~-~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~--~~--qVfdL~~~~p~~al~~l~~~l 132 (534)
-|.+|+.++..... ..+.. ....++++|+..+..- ...+++.+.+.|. .. .++.+....|..-++.+.+.+
T Consensus 456 ~~~~P~~i~~G~g~l~~l~~~l~~~~~~lvVtd~~~~---~~g~~~~v~~~L~~~~~~i~~~~~~~v~~np~~~~v~~~~ 532 (862)
T PRK13805 456 WFKVPKKIYFERGSLPYLLDELDGKKRAFIVTDRFMV---ELGYVDKVTDVLKKRENGVEYEVFSEVEPDPTLSTVRKGA 532 (862)
T ss_pred eeecCCeEEECCCHHHHHHHHhcCCCEEEEEECcchh---hcchHHHHHHHHhcccCCCeEEEeCCCCCCcCHHHHHHHH
Confidence 35667776654422 00110 0123677777754331 1225666666665 32 222222222222222222222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHH
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVV 168 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l 168 (534)
+.++ + .+...||++|| |++..+...+
T Consensus 533 ~~~~--------~-~~~D~IIaiGG-GSviD~AK~i 558 (862)
T PRK13805 533 ELMR--------S-FKPDTIIALGG-GSPMDAAKIM 558 (862)
T ss_pred HHHH--------h-cCCCEEEEeCC-chHHHHHHHH
Confidence 2111 1 23457888887 6766666554
No 126
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=21.77 E-value=3.6e+02 Score=30.50 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=27.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCccchhh
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPF 192 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlAR 192 (534)
...||++|| |++..+...+... ....+|+..||. -..+|-+-
T Consensus 270 ~D~IIAIGG-Gsv~D~AKfvA~~-y~rGi~~i~vPTTllA~vDss~ 313 (542)
T PRK14021 270 SDAIVGLGG-GAATDLAGFVAAT-WMRGIRYVNCPTSLLAMVDAST 313 (542)
T ss_pred CcEEEEEcC-hHHHHHHHHHHHH-HHcCCCEEEeCChHHhhhcccc
Confidence 445777777 8888888877531 124688888887 34444443
No 127
>PTZ00287 6-phosphofructokinase; Provisional
Probab=21.70 E-value=1.7e+02 Score=36.85 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=29.4
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCccchhh-----ccCCC
Q 009462 150 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPF-----SFGWG 197 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~---~l~~~~l~~~~plgiIPlGTGNDlAR-----~LGwg 197 (534)
..+||+|||||+.-..- .+.+.+ -++.+--||-==-||+.. ++|..
T Consensus 930 D~LVvIGGDgS~t~A~~LaE~f~~~g--i~i~VIGVPkTIDNDL~~~~tD~TiGFD 983 (1419)
T PTZ00287 930 NGLVMPGSNVTITEAALLAEYFLEKK--IPTSVVGIPLTGSNNLIHELIETCVGFD 983 (1419)
T ss_pred CEEEEECCchHHHHHHHHHHHHHhcC--CCccEEEeCceeeCCCCCCCCcCCCCHH
Confidence 35999999999865432 222211 223366678777999986 55554
No 128
>PTZ00468 phosphofructokinase family protein; Provisional
Probab=21.25 E-value=1.1e+02 Score=38.26 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=29.5
Q ss_pred cEEEEEcCchHHHHHHHHH---hcCC---CCCCCCEEEeeCCCccchhh
Q 009462 150 LRLIVAGGDGTASWLLGVV---SDLK---LPHSPPVATVPLGTGNNIPF 192 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l---~~~~---l~~~~plgiIPlGTGNDlAR 192 (534)
..+||+|||||+.-....- .+.+ ....+++--||-==-||++.
T Consensus 802 d~LVvIGGDgS~t~A~~Lae~~~~~~~~~~~~gi~VIgVPkTIDNDl~~ 850 (1328)
T PTZ00468 802 RAIAIVGNSEAATFGASLSEQLICMSLNGMKSEIPVVFVPVCLENSISH 850 (1328)
T ss_pred CEEEEeCCchHHHHHHHHHHHHhhhccccccCCCcEEEeCccccCCCCC
Confidence 3699999999987544321 1111 12368888889888999987
No 129
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=21.12 E-value=4.6e+02 Score=26.55 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=24.1
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 141 ~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+++.-......+|.+|| +|+.|++.. .+|.-++|.
T Consensus 234 ~m~~lm~~aDl~Is~~G-~T~~E~~a~--------g~P~i~i~~ 268 (279)
T TIGR03590 234 NMAELMNEADLAIGAAG-STSWERCCL--------GLPSLAICL 268 (279)
T ss_pred HHHHHHHHCCEEEECCc-hHHHHHHHc--------CCCEEEEEe
Confidence 34433445567888999 999999842 467777776
No 130
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=21.00 E-value=1.4e+02 Score=27.36 Aligned_cols=50 Identities=22% Similarity=0.360 Sum_probs=31.3
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcC
Q 009462 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (534)
Q Consensus 148 ~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a 218 (534)
....++.+||.| |-+.+|=+|| ||+.+..+.+. ..-...+.++++.+.+.
T Consensus 44 ~~~~~~~~~g~~-----------------pd~vii~~G~-ND~~~~~~~~~---~~~~~~~~~li~~i~~~ 93 (169)
T cd01831 44 AEYSIIAYSGIG-----------------PDLVVINLGT-NDFSTGNNPPG---EDFTNAYVEFIEELRKR 93 (169)
T ss_pred CcEEEEEecCCC-----------------CCEEEEECCc-CCCCCCCCCCH---HHHHHHHHHHHHHHHHH
Confidence 346788999998 5688888887 88754332111 11123566677777654
No 131
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=20.84 E-value=2.6e+02 Score=33.10 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=29.3
Q ss_pred cEEEEEcCchHHHHHHHHHhc-CCC-CCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSD-LKL-PHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~-~~l-~~~~plgiIPlGTGNDlA 191 (534)
..+|++|||||..-+...... .+. ...+++-.||-==-||++
T Consensus 480 d~LivIGGdgs~~~a~~L~~~~~~~~~~~i~vvgIPkTIDNDi~ 523 (745)
T TIGR02478 480 DGLLIIGGFEAFEALLQLEQAREKYPAFRIPMVVIPATISNNVP 523 (745)
T ss_pred CEEEEeCChHHHHHHHHHHHHHhhCCCCCccEEEecccccCCCC
Confidence 369999999998755433221 001 135888899999999997
No 132
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=20.47 E-value=81 Score=32.56 Aligned_cols=39 Identities=36% Similarity=0.451 Sum_probs=29.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 192 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR 192 (534)
..+|++|||||+.-+. .|.+. ..+++-.||-==-||++-
T Consensus 94 d~Li~IGG~gs~~~a~-~L~~~---~~i~vigiPkTIDNDi~g 132 (282)
T PF00365_consen 94 DALIVIGGDGSMKGAH-KLSEE---FGIPVIGIPKTIDNDIPG 132 (282)
T ss_dssp SEEEEEESHHHHHHHH-HHHHH---HHSEEEEEEEETTSSCTT
T ss_pred CEEEEecCCCHHHHHH-HHHhc---CceEEEEEeccccCCcCC
Confidence 3699999999977654 34421 137888899988999985
No 133
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C.
Probab=20.17 E-value=1.4e+02 Score=30.45 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=24.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccc
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 189 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGND 189 (534)
..||++|| ||++.+...+... ...|+..+|.=--||
T Consensus 77 d~ii~vGg-G~i~D~~K~~A~~---~~~p~isVPTa~S~D 112 (250)
T PF13685_consen 77 DLIIGVGG-GTIIDIAKYAAFE---LGIPFISVPTAASHD 112 (250)
T ss_dssp -EEEEEES-HHHHHHHHHHHHH---HT--EEEEES--SSG
T ss_pred CEEEEeCC-cHHHHHHHHHHHh---cCCCEEEeccccccc
Confidence 46777777 9999999877652 467899999876666
Done!