Query 009462
Match_columns 534
No_of_seqs 198 out of 1526
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 05:43:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009462.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009462hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 5.8E-44 2E-48 365.4 27.6 285 79-479 6-300 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 2.4E-39 8.3E-44 335.3 27.4 285 81-480 24-319 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 1.6E-39 5.6E-44 336.3 25.3 284 81-479 29-319 (332)
4 2an1_A Putative kinase; struct 99.3 1.7E-11 5.7E-16 124.0 15.1 115 81-221 5-122 (292)
5 1yt5_A Inorganic polyphosphate 99.2 1.8E-11 6.1E-16 122.1 8.0 98 83-221 2-99 (258)
6 1u0t_A Inorganic polyphosphate 99.1 8.9E-10 3E-14 112.5 12.7 122 81-222 4-135 (307)
7 2i2c_A Probable inorganic poly 99.0 6.2E-09 2.1E-13 104.4 15.0 100 83-227 2-102 (272)
8 3afo_A NADH kinase POS5; alpha 97.8 0.00011 3.6E-09 77.4 11.3 157 53-229 12-182 (388)
9 1z0s_A Probable inorganic poly 93.5 0.13 4.3E-06 51.6 7.2 54 149-217 69-122 (278)
10 3pfn_A NAD kinase; structural 93.0 1.2 4E-05 46.3 13.6 142 66-229 24-175 (365)
11 3hl0_A Maleylacetate reductase 76.0 6.8 0.00023 40.0 8.3 105 62-184 11-119 (353)
12 3jzd_A Iron-containing alcohol 71.0 11 0.00039 38.5 8.5 86 81-184 36-121 (358)
13 2gru_A 2-deoxy-scyllo-inosose 71.0 5.8 0.0002 40.7 6.4 92 81-184 34-128 (368)
14 1oj7_A Hypothetical oxidoreduc 68.3 19 0.00067 37.2 9.7 120 60-193 27-170 (408)
15 3uhj_A Probable glycerol dehyd 67.3 9.1 0.00031 39.7 6.9 109 56-184 24-138 (387)
16 3okf_A 3-dehydroquinate syntha 66.6 12 0.00041 39.0 7.7 93 80-184 61-157 (390)
17 1o2d_A Alcohol dehydrogenase, 63.2 70 0.0024 32.5 12.7 99 82-192 41-158 (371)
18 1sg6_A Pentafunctional AROM po 61.5 5.6 0.00019 41.3 3.9 40 150-191 107-148 (393)
19 3ox4_A Alcohol dehydrogenase 2 59.7 29 0.001 35.6 9.1 120 59-191 5-147 (383)
20 4grd_A N5-CAIR mutase, phospho 59.2 38 0.0013 31.2 8.6 86 84-187 15-101 (173)
21 3qbe_A 3-dehydroquinate syntha 56.0 17 0.00057 37.5 6.4 90 82-184 44-137 (368)
22 1pfk_A Phosphofructokinase; tr 51.1 31 0.0011 34.9 7.3 37 150-191 96-132 (320)
23 3clh_A 3-dehydroquinate syntha 50.0 11 0.00038 38.2 3.8 93 81-185 26-120 (343)
24 1ujn_A Dehydroquinate synthase 49.2 28 0.00097 35.3 6.8 90 81-184 28-118 (348)
25 3iv7_A Alcohol dehydrogenase I 47.3 33 0.0011 35.1 7.0 84 81-184 37-120 (364)
26 3trh_A Phosphoribosylaminoimid 46.3 61 0.0021 29.8 7.8 80 93-186 14-94 (169)
27 1zxx_A 6-phosphofructokinase; 43.8 33 0.0011 34.7 6.2 37 150-191 95-131 (319)
28 4hf7_A Putative acylhydrolase; 42.8 13 0.00043 34.1 2.7 61 153-217 56-116 (209)
29 3bfj_A 1,3-propanediol oxidore 39.5 1.8E+02 0.006 29.5 11.1 124 59-193 7-153 (387)
30 4a3s_A 6-phosphofructokinase; 39.2 46 0.0016 33.5 6.4 37 150-191 95-131 (319)
31 1xah_A Sadhqs, 3-dehydroquinat 38.6 24 0.00082 35.7 4.3 90 82-184 32-124 (354)
32 1jq5_A Glycerol dehydrogenase; 38.6 57 0.0019 33.0 7.1 106 58-184 5-118 (370)
33 3kuu_A Phosphoribosylaminoimid 38.3 1.7E+02 0.0058 26.9 9.4 91 78-186 8-100 (174)
34 3rf7_A Iron-containing alcohol 37.9 1.7E+02 0.0059 29.8 10.7 118 55-184 20-159 (375)
35 1ta9_A Glycerol dehydrogenase; 37.4 59 0.002 34.2 7.2 112 53-184 59-177 (450)
36 3ors_A N5-carboxyaminoimidazol 34.9 1.4E+02 0.005 27.1 8.3 81 93-187 11-92 (163)
37 3oow_A Phosphoribosylaminoimid 34.8 1.5E+02 0.005 27.2 8.3 81 93-187 13-94 (166)
38 3hbm_A UDP-sugar hydrolase; PS 34.1 90 0.0031 30.6 7.5 35 141-184 218-252 (282)
39 1xmp_A PURE, phosphoribosylami 33.1 1.7E+02 0.006 26.7 8.6 90 81-187 10-100 (170)
40 2ywx_A Phosphoribosylaminoimid 32.7 95 0.0032 28.2 6.7 75 93-184 7-82 (157)
41 3lp6_A Phosphoribosylaminoimid 31.1 1.7E+02 0.006 26.9 8.3 88 83-188 9-97 (174)
42 3gw6_A Endo-N-acetylneuraminid 30.9 15 0.0005 36.4 1.1 14 149-162 46-59 (275)
43 1o4v_A Phosphoribosylaminoimid 30.8 2E+02 0.0069 26.6 8.7 89 82-187 13-102 (183)
44 2hig_A 6-phospho-1-fructokinas 30.3 40 0.0014 36.1 4.4 40 150-191 191-233 (487)
45 2x9a_A Attachment protein G3P; 29.6 13 0.00044 28.6 0.3 10 152-161 41-50 (65)
46 3ce9_A Glycerol dehydrogenase; 28.8 69 0.0024 32.1 5.8 85 82-187 35-123 (354)
47 1vlj_A NADH-dependent butanol 27.6 2.2E+02 0.0074 29.2 9.5 121 60-192 18-161 (407)
48 1u11_A PURE (N5-carboxyaminoim 26.2 2.5E+02 0.0085 26.0 8.4 87 83-187 23-110 (182)
49 3dc7_A Putative uncharacterize 24.5 36 0.0012 31.1 2.5 66 150-218 55-126 (232)
50 1rrm_A Lactaldehyde reductase; 23.3 1.3E+02 0.0045 30.5 6.7 120 59-191 5-149 (386)
51 2f48_A Diphosphate--fructose-6 22.6 76 0.0026 34.5 4.9 40 150-191 168-210 (555)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=5.8e-44 Score=365.35 Aligned_cols=285 Identities=19% Similarity=0.177 Sum_probs=205.5
Q ss_pred CCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009462 79 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (534)
Q Consensus 79 ~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~G 156 (534)
..+++++||+||+||++++.+++..++..|....+ +++.. ..++++.+ +.+.+ ..+...|||+|
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~-~~~~~-------------~~~~d~vv~~G 71 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK-YCQEF-------------ASKVDLIIVFG 71 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH-HHHHH-------------TTTCSEEEEEE
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH-HHHHh-------------hcCCCEEEEEc
Confidence 34689999999999999999999999998876543 44322 35666544 32221 12346899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCC
Q 009462 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 236 (534)
Q Consensus 157 GDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~ 236 (534)
|||||+||++++... ...+|||+||+||||||||+|||+. ++.++++.|.+++++.+|+|+++-
T Consensus 72 GDGTl~~v~~~l~~~--~~~~~l~iiP~Gt~N~~ar~lg~~~--------~~~~a~~~i~~g~~~~iDlg~v~~------ 135 (304)
T 3s40_A 72 GDGTVFECTNGLAPL--EIRPTLAIIPGGTCNDFSRTLGVPQ--------NIAEAAKLITKEHVKPVDVAKANG------ 135 (304)
T ss_dssp CHHHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHTTCCEEEEEEEEETT------
T ss_pred cchHHHHHHHHHhhC--CCCCcEEEecCCcHHHHHHHcCCCc--------cHHHHHHHHHhCCeEEEEEEEECC------
Confidence 999999999999752 3579999999999999999999985 578889999999999999998740
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHH
Q 009462 237 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 316 (534)
Q Consensus 237 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 316 (534)
++|+|++|+|+||+|++.+++.++ +..|+++|++.
T Consensus 136 -------------------------------------~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~ 170 (304)
T 3s40_A 136 -------------------------------------QHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYLS 170 (304)
T ss_dssp -------------------------------------EEESSEEEEC--------------------------CHHHHTT
T ss_pred -------------------------------------EEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHHH
Confidence 269999999999999998875443 45689999999
Q ss_pred HHhhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCccc
Q 009462 317 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 396 (534)
Q Consensus 317 g~k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~d 396 (534)
++++ ++. .+. ..++|++ ||+ .++. +...++|+|.++||||+.++|. ++++
T Consensus 171 ~l~~------l~~--~~~--~~~~i~~---dg~--~~~~--~~~~v~v~N~~~~Ggg~~~~p~-------------a~~~ 220 (304)
T 3s40_A 171 TIRT------VKN--AET--FPVKITY---DGQ--VYED--EAVLVMVGNGEYLGGIPSFIPN-------------VKCD 220 (304)
T ss_dssp TC--------------CC--EEEEEEE---TTE--EEEE--EEEEEEEECSSEETTEECSSTT-------------CCTT
T ss_pred HHHH------Hhh--cCC--ceEEEEE---CCE--EEEe--EEEEEEEECCCcCCCCcccCCC-------------CcCC
Confidence 8887 542 222 2466776 786 3433 5678999999999999999874 7999
Q ss_pred CCcEEEEEecchhHH--HHHHc--c----CCCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEe
Q 009462 397 DGLLEIVGFRDAWHG--LVLLA--P----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 468 (534)
Q Consensus 397 DGlLEVv~v~~~~~~--~~l~~--~----~~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~ 468 (534)
||+|||+++++.... ..++. . ....+++.++++++|+..+ ++++|+|||++... |++|+|.+
T Consensus 221 DG~Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~~v~i~~~~----~~~~~~DGE~~~~~------p~~i~v~p 290 (304)
T 3s40_A 221 DGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETEE----EKEVDTDGESSLHT------PCQIELLQ 290 (304)
T ss_dssp SSCEEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEESEEEEEESS----CCEEEEC--CCEES------SEEEEEEE
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEccEEEEEeCC----CcEEEeCCCCCCCc------eEEEEEEC
Confidence 999999999987532 22221 1 2346889999999999876 79999999998763 89999997
Q ss_pred CceeeEEeCCC
Q 009462 469 LRQVNMLATPC 479 (534)
Q Consensus 469 ~~~v~mL~~~~ 479 (534)
++++++++.+
T Consensus 291 -~al~v~~p~~ 300 (304)
T 3s40_A 291 -GHFTMIYNPA 300 (304)
T ss_dssp -EEEEEECCTT
T ss_pred -CeEEEEechh
Confidence 5999999864
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=2.4e-39 Score=335.33 Aligned_cols=285 Identities=17% Similarity=0.126 Sum_probs=210.5
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
+++++||+||+||++++.++++.+++.|...++ +.+.. ..++++.+ +.+.+. ..+...|||+|||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~-~~~~~~------------~~~~d~vvv~GGD 90 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATL-EAERAM------------HENYDVLIAAGGD 90 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHH-HHHHHT------------TTTCSEEEEEECH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHHh------------hcCCCEEEEEcCc
Confidence 467999999999999998999999999987654 44333 34444432 222210 1234689999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCC
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g 238 (534)
|||+||++++.+. ...+|||+||+||||||||+|||+. ++.++++.|.+++.+.+|+|+++-
T Consensus 91 GTv~~v~~~l~~~--~~~~pl~iIP~GT~N~lAr~Lg~~~--------~~~~al~~i~~g~~~~iD~g~v~~-------- 152 (337)
T 2qv7_A 91 GTLNEVVNGIAEK--PNRPKLGVIPMGTVNDFGRALHIPN--------DIMGALDVIIEGHSTKVDIGKMNN-------- 152 (337)
T ss_dssp HHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHHHTCEEEEEEEEETT--------
T ss_pred hHHHHHHHHHHhC--CCCCcEEEecCCcHhHHHHHcCCCC--------CHHHHHHHHHcCCcEEEEEEEECC--------
Confidence 9999999999542 3579999999999999999999985 577889999999999999998730
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHH
Q 009462 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (534)
Q Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (534)
++|+|++|+|+||+|+..++..++ +..++++|...++
T Consensus 153 -----------------------------------r~fl~~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~l 189 (337)
T 2qv7_A 153 -----------------------------------RYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGF 189 (337)
T ss_dssp -----------------------------------EEESSEEEEECBCC---------------------CGGGSCCCTT
T ss_pred -----------------------------------EEEEEEeeecccHHHHHHhhHHHH--------hccChHHHHHHHH
Confidence 269999999999999988875543 3458899998888
Q ss_pred hhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCC
Q 009462 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (534)
Q Consensus 319 k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (534)
++ ++. .+.+ .++|++ ||+ .++ .+...+++.|++++|||..++|. +.++||
T Consensus 190 ~~------l~~--~~~~--~~~i~~---dg~--~~~--~~~~~v~v~n~~~~gGg~~i~P~-------------a~~~DG 239 (337)
T 2qv7_A 190 EM------LPQ--MKAV--DLRIEY---DGN--VFQ--GEALLFFLGLTNSMAGFEKLVPD-------------AKLDDG 239 (337)
T ss_dssp TT------GGG--BCCE--EEEEEE---TTE--EEE--EEEEEEEEESSCCCSSCSCSSTT-------------CCSSSS
T ss_pred HH------HHh--CCCc--cEEEEE---CCE--EEE--eeEEEEEEECCCCCCCCCccCCC-------------CcCCCC
Confidence 87 431 2222 456776 776 333 25678888999999999999874 789999
Q ss_pred cEEEEEecchhH--HHHH--HccC-----CCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeC
Q 009462 399 LLEIVGFRDAWH--GLVL--LAPN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHL 469 (534)
Q Consensus 399 lLEVv~v~~~~~--~~~l--~~~~-----~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~ 469 (534)
+|||++++.... ++.+ .+.. ...+++.++++|+|+..+ ++++|+|||++... |++|++.+
T Consensus 240 ~ldv~~v~~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~~~----~~~~~iDGE~~~~~------~i~i~v~p- 308 (337)
T 2qv7_A 240 YFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFT----DLQLNVDGEYGGKL------PANFLNLE- 308 (337)
T ss_dssp CEEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECSS----CCEEEETTEEEEES------CEEEEEEE-
T ss_pred eEEEEEEccCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEECC----CCeEEECCCcCCCC------cEEEEEEc-
Confidence 999999998642 3222 1222 256889999999998754 68999999998753 79999997
Q ss_pred ceeeEEeCCCC
Q 009462 470 RQVNMLATPCC 480 (534)
Q Consensus 470 ~~v~mL~~~~~ 480 (534)
+.++++++...
T Consensus 309 ~~l~v~~p~~~ 319 (337)
T 2qv7_A 309 RHIDVFAPNDI 319 (337)
T ss_dssp EEEEEECCTTS
T ss_pred CeEEEEecCcc
Confidence 58999987643
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=1.6e-39 Score=336.30 Aligned_cols=284 Identities=17% Similarity=0.151 Sum_probs=205.9
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~-~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
+++++||+||+||++ +.++.+.+.|....+ +.+.. ..++++.+ +.+.+. ..+...|||+|||
T Consensus 29 ~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~-~~~~~~------------~~~~d~vvv~GGD 92 (332)
T 2bon_A 29 FPASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAAR-YVEEAR------------KFGVATVIAGGGD 92 (332)
T ss_dssp -CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHH-HHHHHH------------HHTCSEEEEEESH
T ss_pred cceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHH-HHHHHH------------hcCCCEEEEEccc
Confidence 477999999999976 566777777765543 33332 23554432 222210 1234689999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEEEeeeccCCCCC
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~~~~~~~~~g 238 (534)
|||+||++++........+|||+||+||+|||||+|||+. ++.++++.|.+++.+.+|+|+++-
T Consensus 93 GTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~~--------~~~~al~~i~~g~~~~iDlg~v~~-------- 156 (332)
T 2bon_A 93 GTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPE--------ALDKALKLAIAGDAIAIDMAQVNK-------- 156 (332)
T ss_dssp HHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCS--------SHHHHHHHHHHSEEEEEEEEEETT--------
T ss_pred hHHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC--------
Confidence 9999999999843223578999999999999999999985 577889999999999999998740
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHHHHHhhhhcCchhhhhcccchHHHHHHHH
Q 009462 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (534)
Q Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (534)
+++|+|++|+|+||+|+.+++..++ +..|+++|++.++
T Consensus 157 ----------------------------------r~~fl~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l 194 (332)
T 2bon_A 157 ----------------------------------QTCFINMATGGFGTRITTETPEKLK--------AALGSVSYIIHGL 194 (332)
T ss_dssp ----------------------------------SCEESSEEEEEEEEEC------------------CCHHHHHHHHHT
T ss_pred ----------------------------------ceEEEEEEeECccHHHHHHhhHHhH--------hcccHHHHHHHHH
Confidence 0169999999999999987764433 3458999999988
Q ss_pred hhhccccccCCCCCcCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCcccCC
Q 009462 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (534)
Q Consensus 319 k~~~f~~~l~~~~~k~l~~~i~l~v~~~dG~~~~i~lp~~i~~ivilNi~s~gGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (534)
+. ++. .+.+ .++|++ ||+ .++. +...++++|.+|+|||+.+||. ++++||
T Consensus 195 ~~------l~~--~~~~--~~~i~~---dg~--~~~~--~~~~v~v~N~~~~ggg~~i~P~-------------a~~~DG 244 (332)
T 2bon_A 195 MR------MDT--LQPD--RCEIRG---ENF--HWQG--DALVIGIGNGRQAGGGQQLCPN-------------ALINDG 244 (332)
T ss_dssp SC------EEE--EECE--EEEEEE---TTE--EEEE--EESEEEEESSSCBTTTBCSCTT-------------CCTTSS
T ss_pred HH------Hhh--CCCe--eEEEEE---CCE--EEEE--EEEEEEEECCCccCCCcccCCC-------------CCCCCC
Confidence 77 331 2222 356666 776 3432 5678888999999999999874 789999
Q ss_pred cEEEEEecchhHHHHHH--ccC---CCccEEEeecEEEEEEccCCCccceeeecCCcCCCCCCCCCCcEEEEEEeCceee
Q 009462 399 LLEIVGFRDAWHGLVLL--APN---GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 473 (534)
Q Consensus 399 lLEVv~v~~~~~~~~l~--~~~---~~~~rl~Q~~~v~I~~~~~~~~~~~vqiDGE~~~~~~p~~~~p~~i~I~~~~~v~ 473 (534)
+|||++++...+++.++ +.. ...+++.++++|+|+..+ ++++|+|||++.. .|++|++.+ ++++
T Consensus 245 ~Ldv~iv~~~~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~~~~----~~~~~iDGE~~~~------~~~~i~v~p-~al~ 313 (332)
T 2bon_A 245 LLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPH----DITFNLDGEPLSG------QNFHIEILP-AALR 313 (332)
T ss_dssp CEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEEEE----EEEEEETTEEEEE------EEEEEEEEE-EEEE
T ss_pred eEEEEEECCHHHHHHHHHHHHcCCCCCcEEEEEeeEEEEEECC----CCeEEecCCCCCC------ceEEEEEEC-CeeE
Confidence 99999999873222211 111 256889999999999865 6899999999875 389999997 5899
Q ss_pred EEeCCC
Q 009462 474 MLATPC 479 (534)
Q Consensus 474 mL~~~~ 479 (534)
++++..
T Consensus 314 vl~p~~ 319 (332)
T 2bon_A 314 CRLPPD 319 (332)
T ss_dssp EEECTT
T ss_pred EEeCCC
Confidence 999754
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.32 E-value=1.7e-11 Score=124.01 Aligned_cols=115 Identities=10% Similarity=-0.010 Sum_probs=68.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhh--hhccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFAS--EIEKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~--~~~~~~~IIv~GG 157 (534)
++.++||+||.++ ...+.+..+.+.|....+ +.+.... + ..+. .. ....++. ...+...|||+||
T Consensus 5 mkki~ii~np~~~--~~~~~~~~i~~~l~~~g~~v~~~~~~---~-----~~~~-~~-~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHP--TALTTHEMLYRWLCDQGYEVIVEQQI---A-----HELQ-LK-NVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTTCEEEEEHHH---H-----HHTT-CS-SCCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCH--HHHHHHHHHHHHHHHCCCEEEEecch---h-----hhcc-cc-cccccchhhcccCCCEEEEEcC
Confidence 4789999999874 445677778887766543 2222110 0 0000 00 0000000 0123468999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCcee
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~ 221 (534)
|||++++++.+... ..|.||| |+||.|+|++. + +. +++++++.+.+|+.+
T Consensus 73 DGT~l~a~~~~~~~---~~P~lGI-~~Gt~gfla~~-~-~~--------~~~~al~~i~~g~~~ 122 (292)
T 2an1_A 73 DGNMLGAARTLARY---DINVIGI-NRGNLGFLTDL-D-PD--------NALQQLSDVLEGRYI 122 (292)
T ss_dssp HHHHHHHHHHHTTS---SCEEEEB-CSSSCCSSCCB-C-TT--------SHHHHHHHHHTTCEE
T ss_pred cHHHHHHHHHhhcC---CCCEEEE-ECCCcccCCcC-C-HH--------HHHHHHHHHHcCCCE
Confidence 99999999999753 2345777 89998888874 4 42 688899999988763
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=99.20 E-value=1.8e-11 Score=122.12 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=69.6
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~ 162 (534)
+++||+||.||.+ +.+++..+.+.|.. ++++.. .+. .......||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~~---~~~~~~--~~~--------------------~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHEV---IEFGEA--NAP--------------------GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSEE---EEEEES--SSC--------------------SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhcC---Cceecc--ccc--------------------ccCCCCEEEEEeCcHHHH
Confidence 4889999999987 77888888887762 333221 100 012346899999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCcee
Q 009462 163 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (534)
Q Consensus 163 ~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~ 221 (534)
++++.+.. ..|.+|| ++||.+.|+ .++ + .++.++++.+.+++.+
T Consensus 56 ~~a~~~~~----~~PilGI-n~G~~Gfl~-~~~-~--------~~~~~al~~i~~g~~~ 99 (258)
T 1yt5_A 56 KAAKKAAD----GTPMVGF-KAGRLGFLT-SYT-L--------DEIDRFLEDLRNWNFR 99 (258)
T ss_dssp HHHTTBCT----TCEEEEE-ESSSCCSSC-CBC-G--------GGHHHHHHHHHTTCCE
T ss_pred HHHHHhCC----CCCEEEE-ECCCCCccC-cCC-H--------HHHHHHHHHHHcCCce
Confidence 99987753 2344777 599996666 454 3 3788899999988764
No 6
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=99.05 E-value=8.9e-10 Score=112.49 Aligned_cols=122 Identities=17% Similarity=0.190 Sum_probs=71.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhH----H--HHHHH---HHHHhhhccchhhhhhccCc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKV----L--HQLYV---TLEKFKAAGDVFASEIEKRL 150 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~a----l--~~l~~---~l~~l~~~~d~~a~~~~~~~ 150 (534)
++.++||+||.++ .+.+.+..+.+.|...++ +.+........ + +.+.. .++.... +. .......
T Consensus 4 m~ki~iI~n~~~~--~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~--~~~~~~d 77 (307)
T 1u0t_A 4 HRSVLLVVHTGRD--EATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDA--DQ--HAADGCE 77 (307)
T ss_dssp -CEEEEEESSSGG--GGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CC
T ss_pred CCEEEEEEeCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhhhhhccccccccccccccccccccc--cc--ccccCCC
Confidence 4789999999986 445678888888876543 22322111110 0 00000 0000000 00 0012346
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceee
Q 009462 151 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQ 222 (534)
Q Consensus 151 ~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~ 222 (534)
.||++|||||+..+++.+... ..|.+|| ++||.|.|+. +. + .+++++++.+.+++...
T Consensus 78 ~vi~~GGDGT~l~a~~~~~~~---~~pvlgi-~~G~~gfl~~-~~-~--------~~~~~~~~~i~~g~~~~ 135 (307)
T 1u0t_A 78 LVLVLGGDGTFLRAAELARNA---SIPVLGV-NLGRIGFLAE-AE-A--------EAIDAVLEHVVAQDYRV 135 (307)
T ss_dssp CEEEEECHHHHHHHHHHHHHH---TCCEEEE-ECSSCCSSCS-EE-G--------GGHHHHHHHHHHTCCEE
T ss_pred EEEEEeCCHHHHHHHHHhccC---CCCEEEE-eCCCCccCcc-cC-H--------HHHHHHHHHHHcCCcEE
Confidence 799999999999999998753 2344665 8999999995 32 3 36888999998887644
No 7
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.97 E-value=6.2e-09 Score=104.45 Aligned_cols=100 Identities=10% Similarity=0.070 Sum_probs=69.5
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~ 162 (534)
++.||+||+ ..+.++++.+.+.|....+ ++.. .+...||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g~-~v~~----------------------------~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYDM-EYDD----------------------------VEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSSC-EECS----------------------------SSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCCC-EeCC----------------------------CCCCEEEEEcCcHHHH
Confidence 578999963 3556778888888876542 1110 1246799999999999
Q ss_pred HHHHHHhcCCCCCCCC-EEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHcCceeeEeEEE
Q 009462 163 WLLGVVSDLKLPHSPP-VATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (534)
Q Consensus 163 ~Vl~~l~~~~l~~~~p-lgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~a~~~~iD~w~ 227 (534)
.+++.+... ...+| +|| |+|| |+|...+. + .+++++++.+.+++.+.-.++.
T Consensus 50 ~aa~~~~~~--~~~~PilGI-n~G~-lgfl~~~~-~--------~~~~~~l~~l~~g~~~i~~r~~ 102 (272)
T 2i2c_A 50 SAFHQYEER--LDEIAFIGI-HTGH-LGFYADWR-P--------AEADKLVKLLAKGEYQKVSYPL 102 (272)
T ss_dssp HHHHHTGGG--TTTCEEEEE-ESSS-CCSSCCBC-G--------GGHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHhhc--CCCCCEEEE-eCCC-CCcCCcCC-H--------HHHHHHHHHHHcCCCEEEEEEE
Confidence 999988641 01455 676 9999 66877775 3 3688899999998765334433
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.00011 Score=77.41 Aligned_cols=157 Identities=13% Similarity=0.158 Sum_probs=87.4
Q ss_pred cccccCcccccCceeecCCcc--cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cE-EEEeecCchhHHHH
Q 009462 53 KSKILNNYYIPNYILVSGSEV--QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVLHQ 127 (534)
Q Consensus 53 ~~~~~~~~~ip~~~~~~~~~~--~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qV-fdL~~~~p~~al~~ 127 (534)
.+..|+.-..|.|+..|.++. ..|. .+++.++||+||.. ....+.+..+.+.|... .+ +.+.. ..+ +.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~w~-~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~---~~a-~~ 84 (388)
T 3afo_A 12 PVNNLRSSSSADFVSPPNSKLQSLIWQ-NPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP---DVA-EE 84 (388)
T ss_dssp EGGGSCCCCCCEEEC----CCEEEECS-SCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH---HHH-HH
T ss_pred eHhhcCcccCcceEeCcchhheeeEcc-CCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC---chh-hh
Confidence 456677777788888887642 2344 45688999999874 45666777777777543 22 21221 111 00
Q ss_pred HHHHHHHh-hh----c----cchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCC
Q 009462 128 LYVTLEKF-KA----A----GDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGK 198 (534)
Q Consensus 128 l~~~l~~l-~~----~----~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~ 198 (534)
+...+... .. . .............||++|||||+..++..+... ..+|.||| ++||.+-|+. +..
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~--~vpPiLGI-N~G~lGFLt~-~~~-- 158 (388)
T 3afo_A 85 ISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNT--QVPPVLAF-ALGTLGFLSP-FDF-- 158 (388)
T ss_dssp HHTTCCSCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTS--CCCCEEEE-ECSSCCSSCC-EEG--
T ss_pred hhhhccccccccccccccccccchhhcccCCCEEEEEeCcHHHHHHHHHhccc--CCCeEEEE-ECCCcccCCc-CCh--
Confidence 10000000 00 0 000000012346899999999999999877542 11244665 9999865653 432
Q ss_pred CCCCCchHHHHHHHHHHHcCceeeEeEEEEe
Q 009462 199 KNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (534)
Q Consensus 199 ~~~~~~~~~~~~~L~~I~~a~~~~iD~w~V~ 229 (534)
.+++++|+.+.+++.....+-.+.
T Consensus 159 -------~~~~~al~~il~g~~~~~~r~~L~ 182 (388)
T 3afo_A 159 -------KEHKKVFQEVISSRAKCLHRTRLE 182 (388)
T ss_dssp -------GGHHHHHHHHHTTCCEEEEECCEE
T ss_pred -------HHHHHHHHHHhcCCceEEEeeEEE
Confidence 368889999999976544444443
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=93.51 E-value=0.13 Score=51.58 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=34.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHc
Q 009462 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (534)
Q Consensus 149 ~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~ 217 (534)
...||+.|||||+-.++..+.. . +||--|..||-+=|+. +.. .+++++|+.+.+
T Consensus 69 ~DlvIvlGGDGT~L~aa~~~~~----~-~PilGIN~G~lGFLt~---~~~-------~~~~~~l~~l~~ 122 (278)
T 1z0s_A 69 FDFIVSVGGDGTILRILQKLKR----C-PPIFGINTGRVGLLTH---ASP-------ENFEVELKKAVE 122 (278)
T ss_dssp SSEEEEEECHHHHHHHHTTCSS----C-CCEEEEECSSSCTTCC---BBT-------TBCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHhCC----C-CcEEEECCCCCccccc---cCH-------HHHHHHHHHHHh
Confidence 4679999999999888865432 3 6666668885444442 221 245666766664
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=92.96 E-value=1.2 Score=46.29 Aligned_cols=142 Identities=19% Similarity=0.161 Sum_probs=72.8
Q ss_pred eeecCCcccccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHH--HH----Hh---
Q 009462 66 ILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVT--LE----KF--- 135 (534)
Q Consensus 66 ~~~~~~~~~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~--l~----~l--- 135 (534)
+.-|.+....|.. +.+.|+||--+.. ......+..+.+.|....+ +-+...- .+.+. +... +. ..
T Consensus 24 ~~~~~~~~l~w~~-~~k~I~iv~K~~~--~~~~~~~~~l~~~L~~~~~~V~ve~~~-~~~~~-~~~~~~~~~~~~~~~~~ 98 (365)
T 3pfn_A 24 IQDPASQRLTWNK-SPKSVLVIKKMRD--ASLLQPFKELCTHLMEENMIVYVEKKV-LEDPA-IASDESFGAVKKKFCTF 98 (365)
T ss_dssp EECTTTCBEEESS-CCCEEEEEECTTC--GGGHHHHHHHHHHHHHTSCEEEEEHHH-HHSHH-HHHCSTTHHHHHHCEEE
T ss_pred ecCccccccccCC-CCCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEehHH-hhhhc-ccccccccccccccccc
Confidence 3344444434444 4578888877654 4455667777776665443 2122210 00000 0000 00 00
Q ss_pred hhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHH
Q 009462 136 KAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQV 215 (534)
Q Consensus 136 ~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I 215 (534)
...-+++ ....+.||+.|||||+-.++..+.. ..+||--|-+| .||.=.. .+..+++++|+.+
T Consensus 99 ~~~~~~~---~~~~DlvI~lGGDGT~L~aa~~~~~----~~~PvlGiN~G-------~LGFLt~---~~~~~~~~~l~~v 161 (365)
T 3pfn_A 99 REDYDDI---SNQIDFIICLGGDGTLLYASSLFQG----SVPPVMAFHLG-------SLGFLTP---FSFENFQSQVTQV 161 (365)
T ss_dssp CTTTCCC---TTTCSEEEEESSTTHHHHHHHHCSS----SCCCEEEEESS-------SCTTTCC---EESTTHHHHHHHH
T ss_pred ccChhhc---ccCCCEEEEEcChHHHHHHHHHhcc----CCCCEEEEcCC-------CCcccee---ecHHHHHHHHHHH
Confidence 0000111 1234579999999999999877653 34554333454 3443221 1224688899999
Q ss_pred HcCceeeEeEEEEe
Q 009462 216 KNAKEMQIDSWHIL 229 (534)
Q Consensus 216 ~~a~~~~iD~w~V~ 229 (534)
.++...--.+-.+.
T Consensus 162 l~g~~~v~~R~~L~ 175 (365)
T 3pfn_A 162 IEGNAAVVLRSRLK 175 (365)
T ss_dssp HHSCCBEEEECCEE
T ss_pred HcCCCeEEEEeeEE
Confidence 98876544454443
No 11
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=76.04 E-value=6.8 Score=40.04 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=56.6
Q ss_pred ccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhh
Q 009462 62 IPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKA 137 (534)
Q Consensus 62 ip~~~~~~~~~-~~---~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~ 137 (534)
.|+.++.-... .. .......++++|+..+.. ..+.+++.+.|....+.......|..-++.+.+.++.++
T Consensus 11 ~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p~~~~v~~~~~~~~- 84 (353)
T 3hl0_A 11 APARIVFSAGSSADVAEEIRRLGLSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHTPVEVTKTAVEAYR- 84 (353)
T ss_dssp CCCCEEECTTGGGGHHHHHHHTTCCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHH-
T ss_pred CCceEEECcCHHHHHHHHHHHhCCCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCCcHHHHHHHHHHHh-
Confidence 67776655422 11 111223367888876542 235677777777643322222222222222333222111
Q ss_pred ccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 138 AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 138 ~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+ .+...||++|| |++..+...+... ..+|+..||.
T Consensus 85 -------~-~~~D~IIavGG-Gs~iD~aK~iA~~---~~~p~i~IPT 119 (353)
T 3hl0_A 85 -------A-AGADCVVSLGG-GSTTGLGKAIALR---TDAAQIVIPT 119 (353)
T ss_dssp -------H-TTCSEEEEEES-HHHHHHHHHHHHH---HCCEEEEEEC
T ss_pred -------c-cCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 1 23457999999 9998888877542 3678888885
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=71.05 E-value=11 Score=38.51 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=49.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGT 160 (534)
.++++|+..+.. ..+.+++.+.|....+.......|..-++.+.+.++.++ + .+...||++|| |+
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~--------~-~~~D~IIavGG-Gs 100 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHVPIESARDATARAR--------E-AGADCAVAVGG-GS 100 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHH--------H-HTCSEEEEEES-HH
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCCCHHHHHHHHHHhh--------c-cCCCEEEEeCC-cH
Confidence 367888876542 235677777787644322222222222222222222111 1 23457999999 99
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 161 ASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 161 V~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+..+...+... ..+|+..||.
T Consensus 101 viD~aK~iA~~---~~~p~i~IPT 121 (358)
T 3jzd_A 101 TTGLGKAIALE---TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHHhc---cCCCEEEEeC
Confidence 98888877542 3678888886
No 13
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=70.96 E-value=5.8 Score=40.71 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=54.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccC-cE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~-qV--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
.++++|+.++.... ...+.+.+.|... .+ +.+....+.+.++.+.+.++.+.+.+ ..+...||++||
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~------~~r~d~iIalGG 103 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAIALG------ANRRTAIVAVGG 103 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSGGGCSHHHHHHHHHHHHHTT------CCTTEEEEEEES
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCcEEEEECC
Confidence 47899999976642 2567777777543 33 33333334333443333333222111 123456888888
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
|++..+...+... ....+|+..||.
T Consensus 104 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 128 (368)
T 2gru_A 104 -GLTGNVAGVAAGM-MFRGIALIHVPT 128 (368)
T ss_dssp -HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hcCCCCEEEECC
Confidence 8999988877632 124689999998
No 14
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=68.27 E-value=19 Score=37.19 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=62.7
Q ss_pred ccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHh
Q 009462 60 YYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKF 135 (534)
Q Consensus 60 ~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l 135 (534)
|..|..++.-... . .... .. ++++|+..+.+-. ...+.+.+.+.|...+++.+....|..-++.+.+.++.+
T Consensus 27 ~~~p~~i~~G~g~l~~l~~~l~-~g-~r~liVtd~~~~~--~~g~~~~v~~~L~g~~~~~f~~v~~~p~~~~v~~~~~~~ 102 (408)
T 1oj7_A 27 LHTPTRILFGKGAIAGLREQIP-HD-ARVLITYGGGSVK--KTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLV 102 (408)
T ss_dssp EEEEEEEEESTTGGGGHHHHSC-TT-CEEEEEECSSHHH--HHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHHH
T ss_pred ecCCCeEEECCCHHHHHHHHHh-cC-CEEEEEECCchhh--hccHHHHHHHHhCCCEEEEeCCcCCCcCHHHHHHHHHHH
Confidence 5557766554322 1 1122 23 7888888654321 112567777777633343333322333233233332211
Q ss_pred hhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC------------------CCCCCCEEEeeC--CCccchhhc
Q 009462 136 KAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK------------------LPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 136 ~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~------------------l~~~~plgiIPl--GTGNDlAR~ 193 (534)
+ + .+...||++|| |++..+...+.-.- ....+|+..||. |||-.....
T Consensus 103 ~--------~-~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt~~ 170 (408)
T 1oj7_A 103 R--------E-QKVTFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAG 170 (408)
T ss_dssp H--------H-HTCCEEEEEES-HHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSE
T ss_pred H--------H-cCCCEEEEeCC-chHHHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhCCC
Confidence 1 1 13457888888 88888877665421 014578999997 666554443
No 15
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=67.29 E-value=9.1 Score=39.69 Aligned_cols=109 Identities=13% Similarity=0.010 Sum_probs=57.9
Q ss_pred ccCcccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhcc-Cc-EEEEeecCchhHHHHHH
Q 009462 56 ILNNYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE-NQ-VIDLGEKAPDKVLHQLY 129 (534)
Q Consensus 56 ~~~~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~-~q-VfdL~~~~p~~al~~l~ 129 (534)
+.+.|..|+.++.-... . ....... ++++||..+.+- ..+.+.+.+.|.. .. +|+.....|.. +.+.
T Consensus 24 m~~~f~~p~~i~~G~g~l~~l~~~l~~~g-~r~liVtd~~~~----~~~~~~v~~~L~~g~~~~~~~~~~~p~~--~~v~ 96 (387)
T 3uhj_A 24 MARAFGGPNKYIQRAGEIDKLAAYLAPLG-KRALVLIDRVLF----DALSERIGKSCGDSLDIRFERFGGECCT--SEIE 96 (387)
T ss_dssp CEEEEECCSEEEECTTTTTTTHHHHGGGC-SEEEEEECTTTH----HHHHHHC------CCEEEEEECCSSCSH--HHHH
T ss_pred hhhHhcCCCeEEEcCCHHHHHHHHHHHcC-CEEEEEECchHH----HHHHHHHHHHHHcCCCeEEEEcCCCCCH--HHHH
Confidence 35678888887765432 1 1111223 788888886653 2366777777765 12 24433222321 2222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 130 ~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+.++.++ + .+...||++|| |++..+...+.-. ..+|+..||.
T Consensus 97 ~~~~~~~--------~-~~~d~IIavGG-Gs~~D~AK~iA~~---~~~p~i~IPT 138 (387)
T 3uhj_A 97 RVRKVAI--------E-HGSDILVGVGG-GKTADTAKIVAID---TGARIVIAPT 138 (387)
T ss_dssp HHHHHHH--------H-HTCSEEEEESS-HHHHHHHHHHHHH---TTCEEEECCS
T ss_pred HHHHHHh--------h-cCCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEecC
Confidence 2222111 1 23467899988 9998888877643 3688999997
No 16
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=66.63 E-value=12 Score=38.95 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=52.5
Q ss_pred CCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 009462 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (534)
Q Consensus 80 ~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qV--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~ 155 (534)
..++++|+.++... ..+.+.+.+.|... ++ +.+....+.+.++.+.+.++.+.+. ...+...||++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~------~~~R~d~IIAv 130 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEH------NYSRDVVVIAL 130 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHT------TCCTTCEEEEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhc------CCCcCcEEEEE
Confidence 35789999997653 23667777777543 22 3333333323333233333222211 11223568888
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 156 GGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 156 GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
|| |++..+...+... ....+|+..||.
T Consensus 131 GG-Gsv~D~ak~~Aa~-~~rgip~I~IPT 157 (390)
T 3okf_A 131 GG-GVIGDLVGFAAAC-YQRGVDFIQIPT 157 (390)
T ss_dssp ES-HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred CC-cHHhhHHHHHHHH-hcCCCCEEEeCC
Confidence 88 8998888876421 124688888897
No 17
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=63.16 E-value=70 Score=32.50 Aligned_cols=99 Identities=21% Similarity=0.275 Sum_probs=52.5
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++++|+..+.+-... .+++.+.+.|... .++.+....|..-++.+.+.++.++ + .+...||++|| |
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~--------~-~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYR--------N-DSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHT--------T-SCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHH--------h-cCCCEEEEeCC-h
Confidence 789999987543222 2455666666432 2222222222222232333322211 1 13457888888 8
Q ss_pred HHHHHHHHHhcCCCC---------------CCCCEEEeeC--CCccchhh
Q 009462 160 TASWLLGVVSDLKLP---------------HSPPVATVPL--GTGNNIPF 192 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~---------------~~~plgiIPl--GTGNDlAR 192 (534)
++..+...+...-.. ..+|+..||. |||-....
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t~ 158 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTP 158 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhcC
Confidence 888887766542111 4688999995 56655443
No 18
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=61.46 E-value=5.6 Score=41.26 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=30.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl--GTGNDlA 191 (534)
..||++|| |++..+...+... ....+|+..||. |||.|-+
T Consensus 107 d~iIalGG-Gsv~D~ak~~Aa~-~~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 107 TVVIALGG-GVIGDLTGFVAST-YMRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp CEEEEEES-HHHHHHHHHHHHH-GGGCCEEEEEECSHHHHHTTT
T ss_pred CEEEEECC-cHHHHHHHHHHHH-hcCCCCEEEECCchhhhhhcC
Confidence 56888888 8888888877631 124689999999 8999984
No 19
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=59.73 E-value=29 Score=35.58 Aligned_cols=120 Identities=13% Similarity=0.164 Sum_probs=62.3
Q ss_pred cccccCceeecCCc----ccccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~----~~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p~~al~~l~~~l 132 (534)
.|..|+.++.-... .........++++|+..+.- ....+.+.+.+.|.... +.......|..-++.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~~~~~g~~~~liVtd~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~ 81 (383)
T 3ox4_A 5 TFYIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAFM---NKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGL 81 (383)
T ss_dssp EEECCSEEEESTTHHHHHHHTTTTSCCCEEEEEEEHHH---HHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHH
T ss_pred eecCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECCch---hhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46678876665432 11222233477888877531 11225677777776543 22222222222223233332
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCccchh
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIP 191 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~---------------l~~~~plgiIPl--GTGNDlA 191 (534)
+.++ + .+...||++|| |++..+...+.-.- ....+|+..||. |||-...
T Consensus 82 ~~~~--------~-~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 82 KILK--------D-NNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp HHHH--------H-HTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred HHHH--------h-cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 2211 1 23467999999 88888777654210 023688999996 5554443
No 20
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=59.23 E-value=38 Score=31.25 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=48.2
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009462 84 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (534)
Q Consensus 84 vlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~ 162 (534)
+.||. |+..-....+.....|....| |++...+.....+++..-.+.... ..-...|.++||.|-+-
T Consensus 15 V~Iim----GS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~--------~g~~ViIa~AG~aahLp 82 (173)
T 4grd_A 15 VGVLM----GSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARE--------RGLRAIIAGAGGAAHLP 82 (173)
T ss_dssp EEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTT--------TTCSEEEEEEESSCCHH
T ss_pred EEEEe----CcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHh--------cCCeEEEEeccccccch
Confidence 55555 443444566666667766666 777654333322222221111110 01124688899999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCc
Q 009462 163 WLLGVVSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 163 ~Vl~~l~~~~l~~~~plgiIPlGTG 187 (534)
-|+.++.. .|.||+ |.-++
T Consensus 83 gvvA~~t~-----~PVIgV-Pv~~~ 101 (173)
T 4grd_A 83 GMLAAKTT-----VPVLGV-PVASK 101 (173)
T ss_dssp HHHHHHCC-----SCEEEE-EECCT
T ss_pred hhheecCC-----CCEEEE-EcCCC
Confidence 99998754 466666 76544
No 21
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=56.02 E-value=17 Score=37.53 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=50.4
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--V--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+.++.... +...+.+.|.... + +.+....+.+.++.+.+.++.+.+. ...+...||++||
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~------~~~r~d~IIavGG 112 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRI------GIGRKDALVSLGG 112 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHH------TCCTTCEEEEEES
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHc------CCCCCcEEEEECC
Confidence 7899999876532 3566677665432 2 3333333333333233332222211 1123457888888
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
|++..+...+... ....+|+..||.
T Consensus 113 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 137 (368)
T 3qbe_A 113 -GAATDVAGFAAAT-WLRGVSIVHLPT 137 (368)
T ss_dssp -HHHHHHHHHHHHH-GGGCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hccCCcEEEECC
Confidence 8888888877531 124688989996
No 22
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=51.10 E-value=31 Score=34.86 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=28.9
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||..-+. .|.+ ..+++--||-==-||++
T Consensus 96 d~LvvIGGdgS~~~a~-~L~~----~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 96 DALVVIGGDGSYMGAM-RLTE----MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp CEEEEEECHHHHHHHH-HHHH----TTCCEEEEEBCTTCCCT
T ss_pred CEEEEECCCchHHHHH-HHHh----hCCCEEEEeccccCCCC
Confidence 4699999999987654 3444 25788889999999997
No 23
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=49.95 E-value=11 Score=38.21 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=52.6
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
.++++|+.++.... .+.+.+.+.|....+ +.+....+.+.++.+.+.++.+.+. ...+...||++||
T Consensus 26 ~~~~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~------~~~r~d~iIavGG- 94 (343)
T 3clh_A 26 KQKALIISDSIVAG----LHLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEM------QLNRHSLMIALGG- 94 (343)
T ss_dssp SSCEEEEEEHHHHT----TTHHHHHTTEECSCEEEEEECSSGGGCSHHHHHHHHHHHHHT------TCCTTCEEEEEES-
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhCCcEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCCCCceEEEECC-
Confidence 46889998865532 246777777765443 3333333333333333333222211 1123357888888
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPLG 185 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPlG 185 (534)
|++..+...+... ....+|+..||.=
T Consensus 95 Gsv~D~ak~~A~~-~~rgip~i~IPTT 120 (343)
T 3clh_A 95 GVISDMVGFASSI-YFRGIDFINIPTT 120 (343)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHH-hccCCCEEEeCCc
Confidence 8888888877632 1247889999943
No 24
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=49.25 E-value=28 Score=35.25 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=51.1
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
.++++|+.++.. .. +.+.+.+.|. ..+ +.+....+.+.++.+.+.++.+.+. ...+...||++|| |
T Consensus 28 ~~kvliVtd~~v----~~-~~~~v~~~L~-~~~~~~~~~ge~~~~~~~v~~~~~~~~~~------~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRV----EG-FAQEVAKALG-VRHLLGLPGGEAAKSLEVYGKVLSWLAEK------GLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGG----HH-HHHHHHHHHT-CCCEEEECCSGGGSSHHHHHHHHHHHHHH------TCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcH----HH-HHHHHHHHhc-cCeEEEECCCCCCCCHHHHHHHHHHHHHc------CCCCCCEEEEECC-c
Confidence 478899988653 23 6777777775 333 3333323333333333332222211 1123357888888 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
++..+...+... ....+|+..||.
T Consensus 95 sv~D~ak~~A~~-~~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAAT-YLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred HHHHHHHHHHHH-hccCCCEEEecC
Confidence 888888877632 124688999995
No 25
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=47.31 E-value=33 Score=35.08 Aligned_cols=84 Identities=14% Similarity=0.105 Sum_probs=48.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGT 160 (534)
.++++|+..+.. ..+.+++.+.|....+|+-....| -.+.+.+.++.++ + .+...||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~~v~~~p--~~~~v~~~~~~~~--------~-~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEVAIWHDEVVMHV--PIEVAERARAVAT--------D-NEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCCSEEECCCCTTC--BHHHHHHHHHHHH--------H-TTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCCCEEEcceecCC--CHHHHHHHHHHHH--------h-cCCCEEEEeCC-cH
Confidence 367788776542 235667777776444454222222 2222333222111 1 23457999999 89
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 161 ASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 161 V~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+..+...+... ..+|+..||.
T Consensus 100 ~iD~aK~iA~~---~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT---TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHHhc---cCCCEEEEcC
Confidence 88888877542 3678888896
No 26
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=46.30 E-value=61 Score=29.78 Aligned_cols=80 Identities=10% Similarity=0.052 Sum_probs=43.9
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009462 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (534)
Q Consensus 93 Gg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~ 171 (534)
|+..-....+.....|....+ |++...+.....+++..-.+...++ .-...|.++||.+-+--|+.++..
T Consensus 14 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~--------g~~ViIa~AG~aa~LpgvvA~~t~- 84 (169)
T 3trh_A 14 GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNR--------GCAVFIAAAGLAAHLAGTIAAHTL- 84 (169)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHT--------TEEEEEEEECSSCCHHHHHHHTCS-
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhC--------CCcEEEEECChhhhhHHHHHhcCC-
Confidence 444445566666667766665 7775533322222222211110000 112468889999999999988753
Q ss_pred CCCCCCCEEEeeCCC
Q 009462 172 KLPHSPPVATVPLGT 186 (534)
Q Consensus 172 ~l~~~~plgiIPlGT 186 (534)
.|.||+ |.-+
T Consensus 85 ----~PVIgV-P~~~ 94 (169)
T 3trh_A 85 ----KPVIGV-PMAG 94 (169)
T ss_dssp ----SCEEEE-ECCC
T ss_pred ----CCEEEe-ecCC
Confidence 455665 6544
No 27
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=43.80 E-value=33 Score=34.67 Aligned_cols=37 Identities=30% Similarity=0.421 Sum_probs=28.7
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||..-+. .|.+ ..+++--||-==-||++
T Consensus 95 d~LvvIGGdgS~~~a~-~L~~----~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 95 DAVVVIGGDGSYHGAL-QLTR----HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp CEEEEEECHHHHHHHH-HHHH----TTCCEEEEEEETTCCCT
T ss_pred CEEEEECCchHHHHHH-HHHH----hCCCEEEEeecccCCCC
Confidence 4699999999987554 3344 25788889999999997
No 28
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=42.85 E-value=13 Score=34.14 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=34.1
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCCCCCchHHHHHHHHHHHc
Q 009462 153 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (534)
Q Consensus 153 Iv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~L~~I~~ 217 (534)
..+|||-| .+++.-+...-+...|-+.+|=+|| ||+++..+-.. .......+.++++.+..
T Consensus 56 ~Gi~G~tt-~~~l~r~~~~v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~~ 116 (209)
T 4hf7_A 56 RGISGQTS-YQFLLRFREDVINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAKA 116 (209)
T ss_dssp EECTTCCH-HHHHHHHHHHTGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHHH
T ss_pred eccCcccH-HHHHHHHHHHHHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHhc
Confidence 45688866 4455544331123467899999997 99987654321 00011235556665544
No 29
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=39.50 E-value=1.8e+02 Score=29.51 Aligned_cols=124 Identities=17% Similarity=0.191 Sum_probs=60.2
Q ss_pred cccccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~-~~---~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qVfdL~~~~p~~al~~l~~~l 132 (534)
.|.+|..++.-... .. .......++++|+..+..-... ..+.+.+.+.|... .++.+....+..-++.+.+.+
T Consensus 7 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 85 (387)
T 3bfj_A 7 DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGL 85 (387)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred eeeCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 35667766554321 10 1111223788998887654320 01345555555432 232233222222233233332
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCccchhhc
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFS 193 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~--------------~-l~~~~plgiIPl--GTGNDlAR~ 193 (534)
+.+++ .+...||++|| |++..+...+.-. + ....+|+..||. |||--....
T Consensus 86 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt~~ 153 (387)
T 3bfj_A 86 AVFRR---------EQCDIIVTVGG-GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRH 153 (387)
T ss_dssp HHHHH---------TTCCEEEEEES-HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGCSE
T ss_pred HHHHh---------cCCCEEEEeCC-cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCccccccCc
Confidence 22111 13357888888 8888777766431 0 014678999996 565444433
No 30
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=39.21 E-value=46 Score=33.54 Aligned_cols=37 Identities=35% Similarity=0.515 Sum_probs=28.9
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||..-+. .+.+ ..+++--||-==-||++
T Consensus 95 d~L~~IGGdgS~~~a~-~l~~----~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 95 EGLVVIGGDGSYMGAK-KLTE----HGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp CEEEEEECTTHHHHHH-HHHH----TTCCEEEEEEETTCCCT
T ss_pred CEEEEeCCcHHHHHHH-HHhc----cCCcEEEeeccccCCCC
Confidence 4699999999987654 4554 35778888999999997
No 31
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=38.62 E-value=24 Score=35.75 Aligned_cols=90 Identities=19% Similarity=0.267 Sum_probs=46.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCc-E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ-V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q-V--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGD 158 (534)
++++|+.++.. ...+.+.+.+.| ... + +.+....+.+-++.+.+.++.+.+.+ ..+...||++||
T Consensus 32 ~~~liVtd~~~----~~~~~~~v~~~L-~~g~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYV----NQYFANKFDDIL-SYENVHKVIIPAGEKTKTFEQYQETLEYILSHH------VTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHH----HHHHHHHHC-------CEEEEEECSGGGGCSHHHHHHHHHHHHTTC------CCTTCEEEEEES-
T ss_pred CeEEEEECCcH----HHHHHHHHHHHH-hcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCceEEEECC-
Confidence 67888888543 222566666666 432 3 33333333333333333332222110 112357888888
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 159 GTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 159 GTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
|++..+...+... ....+|+..||.
T Consensus 100 Gsv~D~ak~vA~~-~~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAAT-LLRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred hHHHHHHHHHHHH-hccCCCEEEECC
Confidence 8888888877632 135788999997
No 32
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=38.59 E-value=57 Score=33.03 Aligned_cols=106 Identities=12% Similarity=0.028 Sum_probs=57.6
Q ss_pred CcccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--E-EEEeecCch-hHHHHHH
Q 009462 58 NNYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAPD-KVLHQLY 129 (534)
Q Consensus 58 ~~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--V-fdL~~~~p~-~al~~l~ 129 (534)
+.|..|..++.-... . ....... ++++|+..+.+-. .+.+.+.+.|.... + +.+..+.|. +.++++.
T Consensus 5 ~~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~ 79 (370)
T 1jq5_A 5 RVFISPAKYVQGKNVITKIANYLEGIG-NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIA 79 (370)
T ss_dssp BCCCCCSEEEEETTGGGGHHHHHTTTC-SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHH
T ss_pred eEecCCCeEEECcCHHHHHHHHHHHcC-CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHH
Confidence 456677766554321 1 1112223 7899988765432 35666777775432 2 233222222 2222222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 130 ~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
.. ++ + .+...||++|| |++..+...+.-. ..+|+..||.
T Consensus 80 ~~---~~--------~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPT 118 (370)
T 1jq5_A 80 NI---AR--------K-AEAAIVIGVGG-GKTLDTAKAVADE---LDAYIVIVPT 118 (370)
T ss_dssp HH---HH--------H-TTCSEEEEEES-HHHHHHHHHHHHH---HTCEEEEEES
T ss_pred HH---HH--------h-cCCCEEEEeCC-hHHHHHHHHHHHh---cCCCEEEecc
Confidence 21 11 1 13457888888 8888888877642 3688999996
No 33
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=38.32 E-value=1.7e+02 Score=26.94 Aligned_cols=91 Identities=12% Similarity=0.161 Sum_probs=49.9
Q ss_pred CCCCCe-EEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 009462 78 LIPSCP-VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (534)
Q Consensus 78 ~~~~~p-vlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~ 155 (534)
.++++| +.||. |+..-....+.....|....+ |++...+.....+++..-.+.... ..-...|.++
T Consensus 8 ~~~m~~~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~--------~g~~ViIa~A 75 (174)
T 3kuu_A 8 AYAAGVKIAIVM----GSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEA--------NGLHVIIAGN 75 (174)
T ss_dssp SSCCCCCEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTT--------TTCSEEEEEE
T ss_pred cccCCCcEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHh--------CCCcEEEEEC
Confidence 344554 45554 444445566666667766665 777654333222222221111000 0113568899
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCC
Q 009462 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGT 186 (534)
Q Consensus 156 GGDGTV~~Vl~~l~~~~l~~~~plgiIPlGT 186 (534)
||.+-+--|+.++.. .|.||+ |.-+
T Consensus 76 G~aa~LpgvvA~~t~-----~PVIgV-P~~~ 100 (174)
T 3kuu_A 76 GGAAHLPGMLAAKTL-----VPVLGV-PVQS 100 (174)
T ss_dssp ESSCCHHHHHHHTCS-----SCEEEE-EECC
T ss_pred ChhhhhHHHHHhccC-----CCEEEe-eCCC
Confidence 999999999988753 456666 5543
No 34
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=37.89 E-value=1.7e+02 Score=29.84 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=57.5
Q ss_pred cccCcccccCceeecCCcc----cccCCC---CCCeEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHH
Q 009462 55 KILNNYYIPNYILVSGSEV----QRSSLI---PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQ 127 (534)
Q Consensus 55 ~~~~~~~ip~~~~~~~~~~----~~~~~~---~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qVfdL~~~~p~~al~~ 127 (534)
+..+.|..|+.++.-.... ...... ..++++|+..+.-- ...+.+.++. ....+.......|..-.+.
T Consensus 20 ~~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~~~~~~liVtd~~~~---~~~l~~~L~~--~g~~~~~f~~v~~~pt~~~ 94 (375)
T 3rf7_A 20 MSFKNFKCVPKMIFGRGSFVQLDTVLEQERTDANDFVVFLVDDVHQ---HKPLAARVPN--KAHDLVIYVNVDDEPTTVQ 94 (375)
T ss_dssp TTSCCCCCCSCEEESTTGGGGHHHHHHTTCCSTTCCEEEEEEGGGT---TSHHHHHSCC--CTTSEEEEECCSSCCBHHH
T ss_pred cchhhhcCCCeEEEcCCHHHHHHHHHHHhcccCCCeEEEEECchhh---hhHHHHHHHh--cCCeEEEEeCCCCCCCHHH
Confidence 4568899999887765321 111121 13678888875432 1223332221 1223322222222222222
Q ss_pred HHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC
Q 009462 128 LYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL 184 (534)
Q Consensus 128 l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~---------------l~~~~plgiIPl 184 (534)
+.+.++.+++.+ ..+...||++|| |++..+...+.-.- ....+|+..||.
T Consensus 95 v~~~~~~~~~~~------~~~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 95 VDELTAQVKAFN------TKLPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp HHHHHHHHHHHC------SSCCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred HHHHHHHHHHhC------CCCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 323222111100 012567999999 88888877664321 013578889994
No 35
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=37.40 E-value=59 Score=34.22 Aligned_cols=112 Identities=11% Similarity=0.012 Sum_probs=61.2
Q ss_pred cccccCcccccCceeecCCc-c---cccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cE-EEEeecCchhHH
Q 009462 53 KSKILNNYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVL 125 (534)
Q Consensus 53 ~~~~~~~~~ip~~~~~~~~~-~---~~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qV-fdL~~~~p~~al 125 (534)
.+.+.+.|..|..++.-... . ........++++|+..+.+-. .+.+.+.+.|... ++ |.+..+.|..
T Consensus 59 ~~~~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~~~-- 132 (450)
T 1ta9_A 59 EESKDRIFTSPQKYVQGRHAFTRSYMYVKKWATKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEASL-- 132 (450)
T ss_dssp CCCSSEEEECCSEEEEETTGGGGHHHHHTTTCSSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCCCH--
T ss_pred cCccceEEeCCceEEECcCHHHHHHHHHHhcCCCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCCCH--
Confidence 34555677888876654322 1 111222334899988765532 2556666666543 22 2332222222
Q ss_pred HHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 126 HQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 126 ~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+.+.+..+ ++++ +...||++|| |++..+...+.-. ..+|+..||.
T Consensus 133 ~~v~~~~~--------~~~~--~~D~IIAvGG-GSviD~AK~iA~~---~giP~I~IPT 177 (450)
T 1ta9_A 133 VELDKLRK--------QCPD--DTQVIIGVGG-GKTMDSAKYIAHS---MNLPSIICPT 177 (450)
T ss_dssp HHHHHHHT--------TSCT--TCCEEEEEES-HHHHHHHHHHHHH---TTCCEEEEES
T ss_pred HHHHHHHH--------HHhh--CCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEEeC
Confidence 11222211 1222 3457888888 8888888877643 4689999996
No 36
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=34.93 E-value=1.4e+02 Score=27.10 Aligned_cols=81 Identities=11% Similarity=0.164 Sum_probs=45.3
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009462 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (534)
Q Consensus 93 Gg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~ 171 (534)
|+..-....+.....|....+ ||+...+.....+++..-.+.... ..-...|.++||.+-+--|+.++..
T Consensus 11 gs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~--------~g~~ViIa~AG~aa~LpgvvA~~t~- 81 (163)
T 3ors_A 11 GSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARE--------RGINIIIAGAGGAAHLPGMVASLTT- 81 (163)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTT--------TTCCEEEEEEESSCCHHHHHHHHCS-
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHh--------CCCcEEEEECCchhhhHHHHHhccC-
Confidence 443444566666666666555 777654333222222221111100 0113568899999999999998754
Q ss_pred CCCCCCCEEEeeCCCc
Q 009462 172 KLPHSPPVATVPLGTG 187 (534)
Q Consensus 172 ~l~~~~plgiIPlGTG 187 (534)
.|.||+ |.-++
T Consensus 82 ----~PVIgV-P~~~~ 92 (163)
T 3ors_A 82 ----LPVIGV-PIETK 92 (163)
T ss_dssp ----SCEEEE-EECCT
T ss_pred ----CCEEEe-eCCCC
Confidence 355665 66665
No 37
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=34.84 E-value=1.5e+02 Score=27.18 Aligned_cols=81 Identities=11% Similarity=0.185 Sum_probs=46.3
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009462 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (534)
Q Consensus 93 Gg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~ 171 (534)
|+..-....+.....|....+ ||+...+.....+++..-++....+ .-...|.++||.+-+--|+.++..
T Consensus 13 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~--------g~~ViIa~AG~aa~LpgvvA~~t~- 83 (166)
T 3oow_A 13 GSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKER--------GLKVIIAGAGGAAHLPGMVAAKTT- 83 (166)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTT--------TCCEEEEEECSSCCHHHHHHHTCS-
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhC--------CCcEEEEECCcchhhHHHHHhccC-
Confidence 444445566777777776665 7776543332222232222211110 113468889999999999988753
Q ss_pred CCCCCCCEEEeeCCCc
Q 009462 172 KLPHSPPVATVPLGTG 187 (534)
Q Consensus 172 ~l~~~~plgiIPlGTG 187 (534)
.|.||+ |.-++
T Consensus 84 ----~PVIgV-P~~~~ 94 (166)
T 3oow_A 84 ----LPVLGV-PVKSS 94 (166)
T ss_dssp ----SCEEEE-ECCCT
T ss_pred ----CCEEEe-ecCcC
Confidence 355555 77665
No 38
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=34.07 E-value=90 Score=30.57 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=23.8
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009462 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (534)
Q Consensus 141 ~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~l~~~~plgiIPl 184 (534)
+++.-......+|..|| +|+.|++-. ..|.-+||+
T Consensus 218 ~m~~~m~~aDlvI~~gG-~T~~E~~~~--------g~P~i~ip~ 252 (282)
T 3hbm_A 218 NIAKLMNESNKLIISAS-SLVNEALLL--------KANFKAICY 252 (282)
T ss_dssp CHHHHHHTEEEEEEESS-HHHHHHHHT--------TCCEEEECC
T ss_pred HHHHHHHHCCEEEECCc-HHHHHHHHc--------CCCEEEEeC
Confidence 34433444556788899 999999832 567777885
No 39
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=33.10 E-value=1.7e+02 Score=26.75 Aligned_cols=90 Identities=11% Similarity=0.154 Sum_probs=49.0
Q ss_pred CCeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009462 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (534)
Q Consensus 81 ~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDG 159 (534)
++|...|+ .|+..-....+.....|....+ ||+...+.....+++..-.+...+ ..-...|.++||.+
T Consensus 10 ~~~~V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~--------~g~~ViIa~AG~aa 78 (170)
T 1xmp_A 10 MKSLVGVI---MGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARE--------RGLKVIIAGAGGAA 78 (170)
T ss_dssp -CCSEEEE---ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTT--------TTCCEEEEEEESSC
T ss_pred CCCcEEEE---ECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHh--------CCCcEEEEECCchh
Confidence 35544444 2544555667777777776666 777654332222222211110000 00135688999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCc
Q 009462 160 TASWLLGVVSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 160 TV~~Vl~~l~~~~l~~~~plgiIPlGTG 187 (534)
-+--|+.++.. .|.||+ |.-++
T Consensus 79 ~LpgvvA~~t~-----~PVIgV-P~~~~ 100 (170)
T 1xmp_A 79 HLPGMVAAKTN-----LPVIGV-PVQSK 100 (170)
T ss_dssp CHHHHHHTTCC-----SCEEEE-EECCT
T ss_pred hhHHHHHhccC-----CCEEEe-eCCCC
Confidence 99999987643 455665 66554
No 40
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=32.66 E-value=95 Score=28.16 Aligned_cols=75 Identities=13% Similarity=0.195 Sum_probs=44.0
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009462 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (534)
Q Consensus 93 Gg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~ 171 (534)
|+..-....+.....|....+ ||+...+.....+++.. ++++......|.++||.|-+--|+.++..
T Consensus 7 gs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~-----------~~~~a~~~ViIa~AG~aa~Lpgvva~~t~- 74 (157)
T 2ywx_A 7 GSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEE-----------IVKNSKADVFIAIAGLAAHLPGVVASLTT- 74 (157)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHH-----------HHHHCCCSEEEEEEESSCCHHHHHHTTCS-
T ss_pred ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHH-----------HHHhcCCCEEEEEcCchhhhHHHHHhccC-
Confidence 444444556666666666555 77765433322222211 12222235679999999999999987643
Q ss_pred CCCCCCCEEEeeC
Q 009462 172 KLPHSPPVATVPL 184 (534)
Q Consensus 172 ~l~~~~plgiIPl 184 (534)
.|.||+ |.
T Consensus 75 ----~PVIgV-P~ 82 (157)
T 2ywx_A 75 ----KPVIAV-PV 82 (157)
T ss_dssp ----SCEEEE-EE
T ss_pred ----CCEEEe-cC
Confidence 455665 66
No 41
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=31.14 E-value=1.7e+02 Score=26.85 Aligned_cols=88 Identities=13% Similarity=0.182 Sum_probs=48.9
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV 161 (534)
.+.||. |+..-....+.....|....+ |++...+.....+++..-++... +..-...|.++||.+-+
T Consensus 9 ~V~Iim----gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~--------~~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIM----GSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAA--------ARGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHH--------HHTCCEEEEEEESSCCH
T ss_pred eEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHH--------hCCCCEEEEecCchhhh
Confidence 355554 443444566666666666555 77755333222222222111100 01123568999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCcc
Q 009462 162 SWLLGVVSDLKLPHSPPVATVPLGTGN 188 (534)
Q Consensus 162 ~~Vl~~l~~~~l~~~~plgiIPlGTGN 188 (534)
--|+.++.. .|.||+ |.-+++
T Consensus 77 pgvvA~~t~-----~PVIgV-P~~~~~ 97 (174)
T 3lp6_A 77 PGMVAAATP-----LPVIGV-PVPLGR 97 (174)
T ss_dssp HHHHHHHCS-----SCEEEE-EECCSS
T ss_pred HHHHHhccC-----CCEEEe-eCCCCC
Confidence 999998754 355665 766663
No 42
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=30.86 E-value=15 Score=36.36 Aligned_cols=14 Identities=50% Similarity=0.900 Sum_probs=11.8
Q ss_pred CcEEEEEcCchHHH
Q 009462 149 RLRLIVAGGDGTAS 162 (534)
Q Consensus 149 ~~~IIv~GGDGTV~ 162 (534)
..|||||||+||-+
T Consensus 46 ~q~~i~~g~~~t~~ 59 (275)
T 3gw6_A 46 GQRIIFCGGEGTSS 59 (275)
T ss_dssp GCEEEEESSSSSST
T ss_pred ccEEEEecCCCCCC
Confidence 35899999999965
No 43
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=30.76 E-value=2e+02 Score=26.64 Aligned_cols=89 Identities=13% Similarity=0.231 Sum_probs=49.7
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGT 160 (534)
-|...|+ .|+..-....+.....|....+ ||+...+.....+++..-.+... +..-...|.++||.+-
T Consensus 13 ~~~V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~--------~~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGII---MGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAE--------ERGIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEE---ESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTT--------TTTCCEEEEEEESSCC
T ss_pred CCeEEEE---eccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHH--------hCCCcEEEEecCcccc
Confidence 4444444 3555555667777777776666 77765433222222221111100 0011356889999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCc
Q 009462 161 ASWLLGVVSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 161 V~~Vl~~l~~~~l~~~~plgiIPlGTG 187 (534)
+--|+.++.. .|.||+ |.-++
T Consensus 82 LpgvvA~~t~-----~PVIgV-P~~~~ 102 (183)
T 1o4v_A 82 LPGMVASITH-----LPVIGV-PVKTS 102 (183)
T ss_dssp HHHHHHHHCS-----SCEEEE-EECCT
T ss_pred cHHHHHhccC-----CCEEEe-eCCCC
Confidence 9999998854 355555 76665
No 44
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=30.25 E-value=40 Score=36.07 Aligned_cols=40 Identities=28% Similarity=0.261 Sum_probs=28.8
Q ss_pred cEEEEEcCchHHHHHH---HHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLL---GVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl---~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..++++|||||..-+. ..+.+. ...+++--||-==-||++
T Consensus 191 d~LvvIGGdgS~~~A~~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 191 NILFTVGGDGTQRGALVISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHHHh--CCCceEEeccccccCCCC
Confidence 3699999999977433 333232 235788889999999996
No 45
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=29.63 E-value=13 Score=28.63 Aligned_cols=10 Identities=10% Similarity=0.132 Sum_probs=9.6
Q ss_pred EEEEcCchHH
Q 009462 152 LIVAGGDGTA 161 (534)
Q Consensus 152 IIv~GGDGTV 161 (534)
|+||+||||+
T Consensus 41 ViVg~~dgtv 50 (65)
T 2x9a_A 41 IGIGYDNDTS 50 (65)
T ss_dssp EEEEETTTTE
T ss_pred EEEECCCCCE
Confidence 9999999997
No 46
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=28.78 E-value=69 Score=32.13 Aligned_cols=85 Identities=16% Similarity=0.117 Sum_probs=48.8
Q ss_pred CeEEEEEcCCCCCCChhhHHHHHHHHhccC--cE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009462 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (534)
Q Consensus 82 ~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qV--fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GG 157 (534)
++++|+..+.+-. .+.+.+.+.|... ++ |+- ...| -++.+.+. +.++ + .+...||++||
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~-~~~~--~~~~v~~~-~~~~--------~-~~~d~IIavGG 97 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVET-VKNI--DFDEIGTN-AFKI--------P-AEVDALIGIGG 97 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEE-ECCC--BHHHHHHH-HTTS--------C-TTCCEEEEEES
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEec-CCCC--CHHHHHHH-HHhh--------h-cCCCEEEEECC
Confidence 6899998865532 3566777777543 23 432 3233 22222222 2111 1 23456888887
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCc
Q 009462 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 158 DGTV~~Vl~~l~~~~l~~~~plgiIPlGTG 187 (534)
|++..+...+.-. ..+|+..||.=.|
T Consensus 98 -Gsv~D~aK~vA~~---~~~p~i~IPTT~~ 123 (354)
T 3ce9_A 98 -GKAIDAVKYMAFL---RKLPFISVPTSTS 123 (354)
T ss_dssp -HHHHHHHHHHHHH---HTCCEEEEESCCS
T ss_pred -hHHHHHHHHHHhh---cCCCEEEecCccc
Confidence 8888888877632 4689999996443
No 47
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=27.64 E-value=2.2e+02 Score=29.15 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=59.7
Q ss_pred ccccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHH
Q 009462 60 YYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLE 133 (534)
Q Consensus 60 ~~ip~~~~~~~~~-~~---~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~q--VfdL~~~~p~~al~~l~~~l~ 133 (534)
|..|+.++.-... .. .......++++|+..+.+-.. ..+.+.+.+.|.... +.......|..-++.+.+.++
T Consensus 18 ~~~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~--~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~ 95 (407)
T 1vlj_A 18 FHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKK--NGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVE 95 (407)
T ss_dssp ECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHH--SSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHH
T ss_pred EecCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhh--ccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHH
Confidence 5567776654322 11 111122368888886433111 125666666665432 222222222222232333322
Q ss_pred HhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCccchhh
Q 009462 134 KFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPF 192 (534)
Q Consensus 134 ~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~---------------l~~~~plgiIPl--GTGNDlAR 192 (534)
.+++ .+...||++|| |++..+...+.-.- ....+|+..||. |||--...
T Consensus 96 ~~~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt~ 161 (407)
T 1vlj_A 96 VAKK---------EKVEAVLGVGG-GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNG 161 (407)
T ss_dssp HHHH---------TTCSEEEEEES-HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSS
T ss_pred HHHh---------cCCCEEEEeCC-hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhcC
Confidence 2111 23457888888 88888877665320 124678999996 55544433
No 48
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=26.19 E-value=2.5e+02 Score=25.99 Aligned_cols=87 Identities=13% Similarity=0.085 Sum_probs=48.3
Q ss_pred eEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009462 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (534)
Q Consensus 83 pvlvivNPkSGg~~g~~ll~~~~~~L~~~qV-fdL~~~~p~~al~~l~~~l~~l~~~~d~~a~~~~~~~~IIv~GGDGTV 161 (534)
.+.||.= +..-....+.....|....+ ||+...+.....+++..-.+.... ..-...|.++||.+-+
T Consensus 23 ~V~IimG----S~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~--------~g~~ViIa~AG~aa~L 90 (182)
T 1u11_A 23 VVGIIMG----SQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAE--------RGLNVIIAGAGGAAHL 90 (182)
T ss_dssp SEEEEES----SGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTT--------TTCCEEEEEEESSCCH
T ss_pred EEEEEEC----cHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHh--------CCCcEEEEecCchhhh
Confidence 4666654 33444556666666666555 777654333222222211110000 0013568899999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCc
Q 009462 162 SWLLGVVSDLKLPHSPPVATVPLGTG 187 (534)
Q Consensus 162 ~~Vl~~l~~~~l~~~~plgiIPlGTG 187 (534)
--|+.++.. .|.||+ |.-++
T Consensus 91 pgvvA~~t~-----~PVIgV-P~~~~ 110 (182)
T 1u11_A 91 PGMCAAWTR-----LPVLGV-PVESR 110 (182)
T ss_dssp HHHHHHHCS-----SCEEEE-EECCT
T ss_pred HHHHHhccC-----CCEEEe-eCCCC
Confidence 999998854 355665 66554
No 49
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=24.47 E-value=36 Score=31.14 Aligned_cols=66 Identities=15% Similarity=0.082 Sum_probs=39.7
Q ss_pred cEEEEEcCchHHH---HHHHHHhcCCCCCCCCEEEeeCCCccchhhccCCCCCC---CCCchHHHHHHHHHHHcC
Q 009462 150 LRLIVAGGDGTAS---WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKN---PNTDQQAVLSFLEQVKNA 218 (534)
Q Consensus 150 ~~IIv~GGDGTV~---~Vl~~l~~~~l~~~~plgiIPlGTGNDlAR~LGwg~~~---~~~~~~~~~~~L~~I~~a 218 (534)
+.-..++|+.|.. +++..+.. +...|-+.+|=+|| ||+.+....+... ...-..++.++++.+...
T Consensus 55 v~N~g~~G~t~~~~~~~~~~~~~~--~~~~pd~Vii~~G~-ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~ 126 (232)
T 3dc7_A 55 SDNLGISGSTIGSRYDAMAVRYQA--IPEDADFIAVFGGV-NDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTN 126 (232)
T ss_dssp CEEEECTTCCSSTTSSCHHHHGGG--SCTTCSEEEEECCH-HHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHH
T ss_pred eEEeeeCCcccccChHHHHHHHHh--cCCCCCEEEEEEec-cccccCcCCccccccchHHHHHHHHHHHHHHHHh
Confidence 3456778887775 56666554 34577899999985 9988743222100 001112677888887754
No 50
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=23.34 E-value=1.3e+02 Score=30.45 Aligned_cols=120 Identities=12% Similarity=0.109 Sum_probs=59.6
Q ss_pred cccccCceeecCCc-cc---ccCCCCCCeEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009462 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (534)
Q Consensus 59 ~~~ip~~~~~~~~~-~~---~~~~~~~~pvlvivNPkSGg~~g~~ll~~~~~~L~~~--qVfdL~~~~p~~al~~l~~~l 132 (534)
.|..|..++..... .. .......++++|+..+..- ...+.+.+.+.|... .+..+....|..-++.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~---~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 81 (386)
T 1rrm_A 5 RMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLV---QCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 81 (386)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHH---HTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred cccCCceEEECcCHHHHHHHHHHHcCCCEEEEEECcchh---hchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46677766654321 11 1111123678888765431 112566677766543 232233222222223233332
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---C--------------CCCCCEEEeeC--CCccchh
Q 009462 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---L--------------PHSPPVATVPL--GTGNNIP 191 (534)
Q Consensus 133 ~~l~~~~d~~a~~~~~~~~IIv~GGDGTV~~Vl~~l~~~~---l--------------~~~~plgiIPl--GTGNDlA 191 (534)
+.+++ .+...||++|| |++..+...+.-.- . ...+|+..||. |||--..
T Consensus 82 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 149 (386)
T 1rrm_A 82 GVFQN---------SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVT 149 (386)
T ss_dssp HHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTC
T ss_pred HHHHh---------cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhhC
Confidence 22111 13457888988 88887776654310 0 24689999996 5554333
No 51
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=22.63 E-value=76 Score=34.49 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=28.3
Q ss_pred cEEEEEcCchHHHHHH---HHHhcCCCCCCCCEEEeeCCCccchh
Q 009462 150 LRLIVAGGDGTASWLL---GVVSDLKLPHSPPVATVPLGTGNNIP 191 (534)
Q Consensus 150 ~~IIv~GGDGTV~~Vl---~~l~~~~l~~~~plgiIPlGTGNDlA 191 (534)
..+|++|||||..-+. +...+. ...+++--||-==-||++
T Consensus 168 d~LvvIGGdgS~~~A~~L~e~~~~~--~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 168 NAIIIIGGDDSNTNAAILAEYFKKN--GENIQVIGVPKTIDADLR 210 (555)
T ss_dssp SEEEEEESHHHHHHHHHHHHHHHHT--TCCCEEEEEEEETTCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHHHh--CCCCcEEEeccccCCCCC
Confidence 3699999999966443 222222 235788888998899996
Done!