BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009463
(534 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/537 (89%), Positives = 507/537 (94%), Gaps = 4/537 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MD+TTSGTP IQYHNI DQP+TAI+ PV T+QRNQRHCFG+S PGEFPLAA+PSIVLHV
Sbjct: 1 MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEA----TCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEA 116
LT CNLDPQDLAKLEA TCSFFRQPA+FAPDY+LS+SELAALDMCQKRAIFKPMT
Sbjct: 61 LTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPE 120
Query: 117 ERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQ 176
ERQDLKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVTS GV YSFGSNSSGQ
Sbjct: 121 ERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQ 180
Query: 177 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 236
LGHGTTEEEWRPR IRSLQGIRIIQAAAG GRTMLISDAG+VYAFGKDSFGEAEYGVQGT
Sbjct: 181 LGHGTTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGT 240
Query: 237 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
K VT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND +LGH TEPNDV PHP
Sbjct: 241 KTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHP 300
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
LLG LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQF
Sbjct: 301 LLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQF 360
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
QLLNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV AL+ VKA+
Sbjct: 361 QLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAV 420
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
HVATGDYTTFVVS+DGDVYSFGCGESASLGHN DGQGNRH NVL+P+LVTSLK+V ER
Sbjct: 421 HVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKER 480
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
VVQISLTNS+YWNAHTFALTESGKL+AFGAGDKGQLG+ELVNNQTERGNPE+VD+DL
Sbjct: 481 VVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGMELVNNQTERGNPEQVDVDL 537
>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 535
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/534 (89%), Positives = 511/534 (95%), Gaps = 1/534 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDATTSGTP +QYHNIPDQPITAII P+PTFQR QRHCFG+STPGEFPL+A+PSIVLHV
Sbjct: 1 MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LTACNL+PQDLAKLEATCSFFRQPANFAPD LS+SELAALDMCQKRAIFKPMT +RQD
Sbjct: 61 LTACNLEPQDLAKLEATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQD 120
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
LK +CGGSWKL LR+L+AGEACCRRE SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG
Sbjct: 121 LKLRCGGSWKLALRYLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TT+EEWRPRPIR+LQGIRIIQAAAGAGRTML+SD+GQVYAFGKDSFGEAEYGVQG+K V
Sbjct: 181 TTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVA 240
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+PQ+VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ +DVEPHPLLG
Sbjct: 241 APQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGA 300
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LENIPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQF LLN
Sbjct: 301 LENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLN 360
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL++VKA+HVAT
Sbjct: 361 LQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVAT 420
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQ 479
GDYTTFVVS+DGDVYSFGCGESASLGHNA D QGNRHANVL+P+LVTSLKQ+NERVVQ
Sbjct: 421 GDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQ 480
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTERGNPERV+IDL
Sbjct: 481 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEIDL 534
>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
[Vitis vinifera]
gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
Length = 534
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/534 (88%), Positives = 511/534 (95%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDAT SGTP +QYHNIPDQPI AI+ +P+PTFQR QRHCFG+S+PGEFPLAA+PSIVLHV
Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LTACNL+PQDLAKLEATCSFFRQPA+FAPD++LSISELAALDMC KRAIF+PM ER+
Sbjct: 61 LTACNLEPQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREV 120
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT KG VYSFGSNSSGQLGHG
Sbjct: 121 LKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG 180
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT
Sbjct: 181 TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+LGH TE ND+EPHPLLG
Sbjct: 241 TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGA 300
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG+RTDEKHPRLIEQF++LN
Sbjct: 301 LENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILN 360
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL +VKA+HVAT
Sbjct: 361 LQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVAT 420
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GDYTTFVVS+DGDVYSFGCGES+SLGHN DGQGNRHAN+L+P+LVTSLKQ+ ER+VQI
Sbjct: 421 GDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQI 480
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
SLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTERGNPERVDIDLS
Sbjct: 481 SLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVANQTERGNPERVDIDLS 534
>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
Length = 537
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/539 (90%), Positives = 511/539 (94%), Gaps = 7/539 (1%)
Query: 1 MDATTSGTPAIQYHNIP-DQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLH 59
MDATTSGT +IQYHNI DQPITAI+ APV TFQRNQRHCFGES+PGEFPLAASPSIVLH
Sbjct: 1 MDATTSGTSSIQYHNITTDQPITAIVAAPVSTFQRNQRHCFGESSPGEFPLAASPSIVLH 60
Query: 60 VLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQ 119
VLT CNLDPQDLAKLEA+ + QPANFAPDY+LSISELAALDMCQKRAIFKPMT ER+
Sbjct: 61 VLTTCNLDPQDLAKLEAS-ALLLQPANFAPDYELSISELAALDMCQKRAIFKPMTSEERR 119
Query: 120 DLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH 179
DLKQ+CGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH
Sbjct: 120 DLKQRCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH 179
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G TEEEWRPR IRSLQGIRIIQAAAG GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV
Sbjct: 180 GNTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
T+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGH TEP DVEPHPLLG
Sbjct: 240 TTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLG 299
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQLL
Sbjct: 300 ALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLL 359
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
NLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV AL+++KA+HVA
Sbjct: 360 NLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSNIKAVHVA 419
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGH----NAIADGQGNRHANVLTPQLVTSLKQVNE 475
TGDYTTFVVSE+GDVYSFGCGESASLGH A ADGQG RHANVL+P+LVTSLK+VNE
Sbjct: 420 TGDYTTFVVSEEGDVYSFGCGESASLGHNAAAAANADGQG-RHANVLSPELVTSLKEVNE 478
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
RVVQISLTNSIYWNAHTFALT+SGKLYAFGAGDKGQLG ELVNNQTERGNPERVDIDLS
Sbjct: 479 RVVQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVNNQTERGNPERVDIDLS 537
>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
Length = 541
Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/530 (88%), Positives = 505/530 (95%), Gaps = 2/530 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDAT SGTP +QYHNIPDQPI AI+ +P+PTFQR QRHCFG+S+PGEFPLAA+PSIVLHV
Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEA--TCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
LTACNL+PQDLAKLEA TCSFFRQPA+FAPD++LSISELAALDMC KRAIF+PM ER
Sbjct: 61 LTACNLEPQDLAKLEASATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEER 120
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
+ LKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVT KG VYSFGSNSSGQLG
Sbjct: 121 EVLKQRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLG 180
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
HGTT+EEWRPR IRSL+GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL
Sbjct: 181 HGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 240
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
VT+PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+LGH TE ND+EPHPLL
Sbjct: 241 VTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLL 300
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G LENIPVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG+RTDEKHPRLIEQFQ+
Sbjct: 301 GALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQI 360
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
LNLQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL +VKA+HV
Sbjct: 361 LNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHV 420
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
ATGDYTTFVVS+DGDVYSFGCGES+SLGHN DGQGNRHAN+L+P+LVTSLKQ+ ER+V
Sbjct: 421 ATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMV 480
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 528
QISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTERGNPER
Sbjct: 481 QISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVXNQTERGNPER 530
>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
Length = 535
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/534 (87%), Positives = 502/534 (94%), Gaps = 1/534 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVA-PVPTFQRNQRHCFGESTPGEFPLAASPSIVLH 59
MDATTSGTP IQYHNI DQ ITAI+VA P+PTFQR QR C G STPGEFPL+ASPSIVLH
Sbjct: 1 MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60
Query: 60 VLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQ 119
VLT+CNLDPQDLAKLEATCSFFRQPANFAPD+ LS++ELAA DMC KRAIFKPMT ERQ
Sbjct: 61 VLTSCNLDPQDLAKLEATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQ 120
Query: 120 DLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH 179
DLKQ+CGGSWKLVLR+LLAGEACCRRE SQAIAGPGHSIAVTSKG VYSFGSNSSGQLGH
Sbjct: 121 DLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGH 180
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GTTEEEWRP+PIR+LQGIRIIQAAAGAGRTMLI+D+GQVYAFGKDSFGEAEYG QG+K V
Sbjct: 181 GTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTV 240
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
+P+LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ ND+EPHPLLG
Sbjct: 241 IAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLG 300
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
LE+IPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ L
Sbjct: 301 ALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTL 360
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
NLQP+V++AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+ PKVV AL +VKA+HVA
Sbjct: 361 NLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVA 420
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
TGDYTTFVV+EDGDVYSFGCGESASLGHNA+ D +GNRHANVL P+LVTSLKQ+NERVVQ
Sbjct: 421 TGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQ 480
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTER NPE+VDIDL
Sbjct: 481 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERVNPEQVDIDL 534
>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 530
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/534 (87%), Positives = 503/534 (94%), Gaps = 6/534 (1%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDATTSGTP IQYHNIPDQPITAII P+PTFQR QRHCFG+STPGEFPL+A+PSIVLHV
Sbjct: 1 MDATTSGTPTIQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LTACNLDPQDLAKLEATCSFFRQPANFAPD LS+SELAALDMCQKRAIFKPMT +RQD
Sbjct: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDSDLSLSELAALDMCQKRAIFKPMTTEQRQD 120
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
LK +CGGSWKLVLR+L+AGEACCRRE SQAIAGPGHSIAVTSKG+VYSFGSNSSGQLGHG
Sbjct: 121 LKLRCGGSWKLVLRYLMAGEACCRREKSQAIAGPGHSIAVTSKGIVYSFGSNSSGQLGHG 180
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TTEEEWRPRPIR+LQGIRIIQAAAGAGRTML+SD+GQVYAFG EAEYGVQG+K V
Sbjct: 181 TTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFG-----EAEYGVQGSKTVA 235
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+PQ+VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ +DVEPHPLLG
Sbjct: 236 APQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDEKLGHHTDQSDVEPHPLLGA 295
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LENIPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHGSRTDE++PRLIEQF LLN
Sbjct: 296 LENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEEYPRLIEQFGLLN 355
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL++VKA+HVAT
Sbjct: 356 LQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVAT 415
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQ 479
GDYTTFVVS+DGDVYSFGCG+SASLGHNA D QGNRHA VL P+LVTSLKQ+NERVVQ
Sbjct: 416 GDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKVLDPELVTSLKQINERVVQ 475
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
ISLTN YWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTERGNPERV+IDL
Sbjct: 476 ISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEIDL 529
>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 534
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/535 (83%), Positives = 492/535 (91%), Gaps = 2/535 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDATTS T A+Q+H+IPDQ ++ I+ + TF +++RHCFGES PGEFPLAA+PSIVLHV
Sbjct: 1 MDATTSETAALQFHSIPDQSVSTIVTSATSTFPQSKRHCFGESDPGEFPLAANPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LTACNLDPQDLAKLEATCSFFRQPANFAPDY+LSISELAALDMC+KRAIFKPMT + +
Sbjct: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRKRAIFKPMTPEQHEA 120
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
+KQ+CGGSWKLVLRFL+AGE+CCRRE S AIAGPGHSIAVTSKG VYSFGSNSSGQLGHG
Sbjct: 121 MKQRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNSSGQLGHG 180
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TTEE+ PR IRSLQGIRIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG QG ++VT
Sbjct: 181 TTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGAQGAQVVT 240
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+P+LVESLK+IFVVQAAIGNFFTAVLSREG VYTFSWG D+RLGHHTEPND+EP PL G
Sbjct: 241 TPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSRLGHHTEPNDLEPRPLKGA 300
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LENIPVVQIAAGYCYLLALAC PSGM+VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN
Sbjct: 301 LENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNE+CES PKVV+AL +VKA+HVAT
Sbjct: 361 LQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESSPKVVEALINVKAVHVAT 420
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAI-ADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
GDYTTFVVS+DGDVYSFGCGESASLGHN + + +GNR +VL P+LV SLKQ++ERVVQ
Sbjct: 421 GDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHVLKPELVRSLKQISERVVQ 480
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL NQTERGNPE VDIDL+
Sbjct: 481 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELA-NQTERGNPELVDIDLN 534
>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 533
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/534 (82%), Positives = 480/534 (89%), Gaps = 1/534 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDATTSGTP +QY N+P+QP+ PV FQR +RHCFG+STPGEFPLAA+PSIVLHV
Sbjct: 1 MDATTSGTPGLQYLNLPEQPVPTA-SPPVSPFQRPKRHCFGDSTPGEFPLAANPSIVLHV 59
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LT C LDP+DLA LEATCSFF QPANFAPD LS+SELAALDMC KR IFKPM E ERQ+
Sbjct: 60 LTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNKRVIFKPMNEEERQE 119
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
+K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHSIAVTSKG VY+FG N+SGQLGHG
Sbjct: 120 MKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSIAVTSKGEVYTFGYNNSGQLGHG 179
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TEE+ R +P+RSLQGIRIIQAAAGA RTMLISD G+VYA GK+SFGEAEYG QGT+ VT
Sbjct: 180 HTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTQPVT 239
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND RLGH TE DVEP PLLG
Sbjct: 240 TPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGP 299
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHGSRTDEK+PR+IEQF++LN
Sbjct: 300 LENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFKILN 359
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV+ LN VKA+HVAT
Sbjct: 360 LQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLNHVKAVHVAT 419
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GDYTTFVVS+DGDVYSFGCGESASLGH+ D QGNRHANVL+P +VTSLKQ NERVVQI
Sbjct: 420 GDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQI 479
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
SLTNSIYWNAHTFALTESGKLYAFGAGD+GQLG EL N+ ER PE+VDIDLS
Sbjct: 480 SLTNSIYWNAHTFALTESGKLYAFGAGDQGQLGAELDRNRKERCVPEKVDIDLS 533
>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 532
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/534 (81%), Positives = 481/534 (90%), Gaps = 2/534 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDAT SGTP++QY N+P+Q ++ PV FQR +RHCFG++TPGEFPLAA+PSIVLHV
Sbjct: 1 MDAT-SGTPSLQYINLPEQSVSTT-SPPVSPFQRPKRHCFGDTTPGEFPLAANPSIVLHV 58
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LT C LDP+DLA LEATCSFF QPANFAPD LS+SELAALDMC KR IFKPM E ERQ+
Sbjct: 59 LTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNKRVIFKPMNEEERQE 118
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
+K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTSKG VY+FG N+SGQLGHG
Sbjct: 119 MKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHG 178
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TE+E R +P+RSLQG+RIIQAAAGA RTMLISD G+VYA GK+SFGEAEYG QGTK VT
Sbjct: 179 HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVT 238
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND RLGH TE DVEP PLLG
Sbjct: 239 TPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGP 298
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHGSRTDEK+PR+IEQFQ+LN
Sbjct: 299 LENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILN 358
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV+ L+ VKA+HVAT
Sbjct: 359 LQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVAT 418
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GDYTTFVVS+DGDVYSFGCGESASLGH+ D QGNRHANVL+P +VTSLKQVNER+VQI
Sbjct: 419 GDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQI 478
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
SLTNSIYWNAHTFALTESGKL+AFGAGD+GQLG EL NQ ER PE+VDIDLS
Sbjct: 479 SLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDIDLS 532
>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
Length = 534
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/522 (82%), Positives = 477/522 (91%), Gaps = 4/522 (0%)
Query: 14 HNIPDQPITAIIVAPVP-TFQRNQRHCFGESTPGEFPLAASPSIVLHVLTACNLDPQDLA 72
H I D + V+P+ +FQR+QRHCFG+S PGEFPLAA+PSIVLHVLT+CNL+P DLA
Sbjct: 16 HLIIDDALA--FVSPLQQSFQRSQRHCFGDSAPGEFPLAANPSIVLHVLTSCNLEPDDLA 73
Query: 73 KLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLV 132
LEATCSFFR+PANF PD+QLS+SELAALDMCQKRAIFKPMT+ ER+ KQ+CGGSWKLV
Sbjct: 74 HLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLV 133
Query: 133 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
LRF++AGEACCRRE SQAIAGPGHSIAVT+ G VY+FGSNSSGQLGHG+ EEEWRPR IR
Sbjct: 134 LRFIMAGEACCRREKSQAIAGPGHSIAVTTGGAVYTFGSNSSGQLGHGSLEEEWRPRIIR 193
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
SLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE EY QG+++VT+PQLVESLK+I+
Sbjct: 194 SLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIY 253
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+VQAAIGNFFTAVLSREG VYTFSWGND +LGH TEPNDV+PH L G LENIPVVQIAAG
Sbjct: 254 IVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAG 313
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
YCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVAAGAWH
Sbjct: 314 YCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWH 373
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
AAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV++L +V+AIHVATGDYTTFVVS+ G
Sbjct: 374 AAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAIHVATGDYTTFVVSDKG 433
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
DVYSFGCGES+SLGHN I +G NRH NVL+P+LVTSLK+ NERV QISLTNSIYWNAHT
Sbjct: 434 DVYSFGCGESSSLGHNTITEGN-NRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHT 492
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
FALT+SGKLYAFGAGDKGQLG ELV Q+ERG PERV+IDLS
Sbjct: 493 FALTDSGKLYAFGAGDKGQLGTELVAQQSERGTPERVEIDLS 534
>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
Length = 534
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/522 (81%), Positives = 477/522 (91%), Gaps = 4/522 (0%)
Query: 14 HNIPDQPITAIIVAPVP-TFQRNQRHCFGESTPGEFPLAASPSIVLHVLTACNLDPQDLA 72
H I D + +V+P+ +FQR+QRHCFG S PGEFPLAA+PSIVLHVLT+CNL+P DLA
Sbjct: 16 HLIIDDALA--LVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLHVLTSCNLEPDDLA 73
Query: 73 KLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLV 132
LEATCSFFR+PANF PD+QLS+SELAALDMCQKRAIFKPMT+ ER+ KQ+CGGSWKLV
Sbjct: 74 HLEATCSFFRKPANFPPDFQLSMSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLV 133
Query: 133 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
LRF++AGEACCRRE SQAIAGPGHSIAVT+ G VY+FGSNSSGQLGHG+ EEEWRPR IR
Sbjct: 134 LRFIMAGEACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIR 193
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
SLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE EY QG+++VT+PQLVESLK+I+
Sbjct: 194 SLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIY 253
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+VQAAIGNFFTAVLSREG VYTFSWGND +LGH TEPNDV+PH L G LENIPVVQIAAG
Sbjct: 254 IVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAG 313
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
YCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVAAGAWH
Sbjct: 314 YCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWH 373
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
AAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV++L +V+A+HVATGDYTTFVVS+ G
Sbjct: 374 AAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKG 433
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
DVYSFGCGES+SLGHN I +G NRH NVL+P+LVTSLK+ NERV QISLTNSIYWNAHT
Sbjct: 434 DVYSFGCGESSSLGHNTITEGN-NRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHT 492
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
FALT+SGKLYAFGAGDKGQLG ELV ++ERG PERV+IDLS
Sbjct: 493 FALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDLS 534
>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 534
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/514 (82%), Positives = 472/514 (91%), Gaps = 2/514 (0%)
Query: 22 TAIIVAPVP-TFQRNQRHCFGESTPGEFPLAASPSIVLHVLTACNLDPQDLAKLEATCSF 80
T +V+P+ +FQR+QRHCFG+S+PGEFPLAA+PSIVLHVLT+CN++P+DLA LEATC F
Sbjct: 22 TLSLVSPLQQSFQRSQRHCFGDSSPGEFPLAANPSIVLHVLTSCNVEPEDLAHLEATCKF 81
Query: 81 FRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGE 140
FR+PANF PD+QL +SELAALDMC KRAIFK MT ER+ KQ+CGGSWKLVLRF++AGE
Sbjct: 82 FRKPANFPPDFQLPMSELAALDMCHKRAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGE 141
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
ACCRRE SQAIAGPGHSIAVT+ G VY+FGSN+SGQLGH EEEWRPRPIRSLQGIRII
Sbjct: 142 ACCRREKSQAIAGPGHSIAVTTSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRII 201
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
QAAAGAGRTML+SDAG+VYAFGKDSFGE EYGVQG+++VT+PQ+VESLK+I++VQAAIGN
Sbjct: 202 QAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGN 261
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
FFTAVLSREG VYTFSWG+D +LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALA
Sbjct: 262 FFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALA 321
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
CQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVV +DG
Sbjct: 322 CQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDG 381
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
RVCTWGWGRYGCLGHGNEECESVPKVV+AL VKA+HVATGDYTTFVVS+ GDVYSFGCG
Sbjct: 382 RVCTWGWGRYGCLGHGNEECESVPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGCG 441
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
ES+SLGHN I +G NRH+NVL+P+LVTSLK+ NERVVQ+SLTNSIYWNAHTFALTESGK
Sbjct: 442 ESSSLGHNTIIEGN-NRHSNVLSPELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESGK 500
Query: 501 LYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
LYAFGAGDKGQLG ELV Q ERG PERV+IDLS
Sbjct: 501 LYAFGAGDKGQLGTELVAQQNERGAPERVEIDLS 534
>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 534
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/533 (79%), Positives = 470/533 (88%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHV 60
MDATTS TP IQYHNIPDQPIT I+ +PTFQ QRHCF +S+PGEFPL+ +PSIVLHV
Sbjct: 1 MDATTSETPTIQYHNIPDQPITTIVATQLPTFQPQQRHCFKDSSPGEFPLSDNPSIVLHV 60
Query: 61 LTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQD 120
LT CNL QDLAKLEATCSFF++PANF PD+ LS+SELAALDMCQKRAIF PMT +RQ
Sbjct: 61 LTTCNLYAQDLAKLEATCSFFKRPANFDPDFDLSLSELAALDMCQKRAIFNPMTTEQRQH 120
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
LKQ+CGGSWKLVLRFLLAGEAC RRE SQ IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG
Sbjct: 121 LKQRCGGSWKLVLRFLLAGEACYRREKSQVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
TTE+ W+PRPIR+LQGIRIIQA A GRTMLISD+GQVYAFGK F E E G +G+K+VT
Sbjct: 181 TTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVYAFGKQYFCENEIGNEGSKMVT 240
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+PQLVESLKNIFVVQAAIGN+FTAVLSREGRVYTFSWG+D +L H T+PNDVEP PLLG
Sbjct: 241 TPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGA 300
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCG+GGKLGHG+ TDEK+PRLIEQFQLLN
Sbjct: 301 LEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLN 360
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQP+V+AAG+WHAAVVGQDGRVCTWGWGR+GCLGHGNEEC VPKVV+ L +VKA+HVA
Sbjct: 361 LQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECALVPKVVEELKNVKAVHVAA 420
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GDYTTFVVS+ GD YSFG GES +LGH+ Q + HA+VLTP+LVTS+KQ ERV+QI
Sbjct: 421 GDYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVLTPKLVTSMKQNYERVIQI 480
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
SLTNS+YW AHTFALTESGKLYAFGAGDKGQLG+EL QTER P+RVDIDL
Sbjct: 481 SLTNSVYWIAHTFALTESGKLYAFGAGDKGQLGVELRPYQTERRKPQRVDIDL 533
>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
1 [Glycine max]
Length = 539
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/538 (79%), Positives = 475/538 (88%), Gaps = 5/538 (0%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQ---RNQRHCFGESTPGEFPLAASPSIV 57
MDATTS TP IQ+HNIPDQPIT I+ +PT Q Q HCFG+S+PGEFPL+A+PSIV
Sbjct: 1 MDATTSETPTIQFHNIPDQPITTIVATQLPTLQGQQEQQHHCFGDSSPGEFPLSANPSIV 60
Query: 58 LHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAE 117
LHVLT CNL PQDLAKLEATCSFF+QPANFAPD+ LS+SELAALDMCQKRAIFKPMT +
Sbjct: 61 LHVLTTCNLYPQDLAKLEATCSFFKQPANFAPDFDLSLSELAALDMCQKRAIFKPMTTEQ 120
Query: 118 RQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQ 176
RQ LKQ+CGGSWKLVLRFLLAGEACCRR E SQ IAGPGHSIAVTSKGVVYSFGSNSSGQ
Sbjct: 121 RQHLKQRCGGSWKLVLRFLLAGEACCRRREKSQVIAGPGHSIAVTSKGVVYSFGSNSSGQ 180
Query: 177 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QG 235
LGHGTTE+ W+PRPIR+LQGIRIIQA A GRTMLISD+GQ Y FGK+SFGE E V +G
Sbjct: 181 LGHGTTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAYVFGKESFGEVETIVNRG 240
Query: 236 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 295
+K+VT+PQLVESLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG +L H T+ NDVEP
Sbjct: 241 SKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCVGKLCHQTDQNDVEPR 300
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLGHG++T+E++PRLIEQ
Sbjct: 301 PLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQ 360
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
FQLLNLQP+ +AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEECE VPKVV+ L +VKA
Sbjct: 361 FQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEELRNVKA 420
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+HVATGD+TTFVVS+ GDVYSFG GES SLGH Q + H NVLTP+LVT +KQ+NE
Sbjct: 421 VHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVTWMKQINE 480
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
RVVQISLTN IYWNAHTFALTESGKLYAFGAGDKGQLG+EL +QTE+G PERVDIDL
Sbjct: 481 RVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGVELGAHQTEKGKPERVDIDL 538
>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 534
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/537 (77%), Positives = 477/537 (88%), Gaps = 6/537 (1%)
Query: 1 MDATTSGT--PAIQYHNIPDQPITAIIVAPVPT-FQRNQRHCFGESTPGEFPLAASPSIV 57
MDAT S ++ H I D I+ +V+P+ FQR Q HCFG+S PGEFPLAA+PSIV
Sbjct: 1 MDATMSSEVRSSLPRHLIVDDTIS--VVSPLQQPFQRAQHHCFGDSAPGEFPLAANPSIV 58
Query: 58 LHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAE 117
LHVLT+CNL P+DLA LEATC FFR+PANF PD+ L +SELAALDMCQKRAIFKPM+ E
Sbjct: 59 LHVLTSCNLYPEDLAHLEATCKFFRKPANFPPDFLLPMSELAALDMCQKRAIFKPMSTQE 118
Query: 118 RQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 177
R+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGPGHSIAV++ G Y+FGSN+SGQL
Sbjct: 119 REMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVSTSGAAYTFGSNNSGQL 178
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
GH + EEEWRPRP+RSLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE E+G QG++
Sbjct: 179 GHASLEEEWRPRPVRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEFGNQGSR 238
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
V +PQ+VESLK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +LGH TEPNDV+PH L
Sbjct: 239 AVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLL 298
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG+RTDEK+PRLIEQFQ
Sbjct: 299 TGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGTRTDEKYPRLIEQFQ 358
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
LN+QP+VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL+ VKA++
Sbjct: 359 TLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSSVKAVY 418
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
VATGDYTTF+VS GDVYSFGCGES+SLGHN +G NRH+NVL+P+LVTSL+ NE+V
Sbjct: 419 VATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTIEGN-NRHSNVLSPELVTSLQSKNEKV 477
Query: 478 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
VQ+SLTNS+YWNAHTFALTESGKLYAFGAGDKGQLG ELV+ ++ERG PERV+IDLS
Sbjct: 478 VQVSLTNSVYWNAHTFALTESGKLYAFGAGDKGQLGSELVSQESERGTPERVEIDLS 534
>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
2 [Glycine max]
Length = 535
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/538 (78%), Positives = 470/538 (87%), Gaps = 9/538 (1%)
Query: 1 MDATTSGTPAIQYHNIPDQPITAIIVAPVPTFQ---RNQRHCFGESTPGEFPLAASPSIV 57
MDATTS TP IQ+HNIPDQPIT I+ +PT Q Q HCFG+S+PGEFPL+A+PSIV
Sbjct: 1 MDATTSETPTIQFHNIPDQPITTIVATQLPTLQGQQEQQHHCFGDSSPGEFPLSANPSIV 60
Query: 58 LHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAE 117
LHVLT CNL PQDLAKLEA+ QPANFAPD+ LS+SELAALDMCQKRAIFKPMT +
Sbjct: 61 LHVLTTCNLYPQDLAKLEASA----QPANFAPDFDLSLSELAALDMCQKRAIFKPMTTEQ 116
Query: 118 RQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQ 176
RQ LKQ+CGGSWKLVLRFLLAGEACCRR E SQ IAGPGHSIAVTSKGVVYSFGSNSSGQ
Sbjct: 117 RQHLKQRCGGSWKLVLRFLLAGEACCRRREKSQVIAGPGHSIAVTSKGVVYSFGSNSSGQ 176
Query: 177 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QG 235
LGHGTTE+ W+PRPIR+LQGIRIIQA A GRTMLISD+GQ Y FGK+SFGE E V +G
Sbjct: 177 LGHGTTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAYVFGKESFGEVETIVNRG 236
Query: 236 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 295
+K+VT+PQLVESLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG +L H T+ NDVEP
Sbjct: 237 SKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCVGKLCHQTDQNDVEPR 296
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
PLLG LE+IPVVQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLGHG++T+E++PRLIEQ
Sbjct: 297 PLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQ 356
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
FQLLNLQP+ +AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEECE VPKVV+ L +VKA
Sbjct: 357 FQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEELRNVKA 416
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+HVATGD+TTFVVS+ GDVYSFG GES SLGH Q + H NVLTP+LVT +KQ+NE
Sbjct: 417 VHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVTWMKQINE 476
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
RVVQISLTN IYWNAHTFALTESGKLYAFGAGDKGQLG+EL +QTE+G PERVDIDL
Sbjct: 477 RVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGVELGAHQTEKGKPERVDIDL 534
>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
[Vitis vinifera]
Length = 526
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/453 (89%), Positives = 435/453 (96%)
Query: 82 RQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEA 141
RQPA+FAPD++LSISELAALDMC KRAIF+PM ER+ LKQ+CGGSWKLVLRFLLAGEA
Sbjct: 74 RQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEA 133
Query: 142 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 201
CCRRE SQAIAGPGHSIAVT KG VYSFGSNSSGQLGHGTT+EEWRPR IRSL+GIRIIQ
Sbjct: 134 CCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQ 193
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT+PQLVESLKNIFVVQAAIGNF
Sbjct: 194 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNF 253
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
FTAVLSREGRVYTFSWGNDA+LGH TE ND+EPHPLLG LENIPVVQIAAGYCYLLALAC
Sbjct: 254 FTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALAC 313
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
QP+GM+VYSVGCGLGGKLGHG+RTDEKHPRLIEQF++LNLQP+VVAAGAWHAAVVG+DGR
Sbjct: 314 QPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGR 373
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
VCTWGWGRYGCLGHGNEECESVPKVV+AL +VKA+HVATGDYTTFVVS+DGDVYSFGCGE
Sbjct: 374 VCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGE 433
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
S+SLGHN DGQGNRHAN+L+P+LVTSLKQ+ ER+VQISLTNSIYWNAHTFALTE+GKL
Sbjct: 434 SSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKL 493
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
YAFGAGDKGQLG+ELV NQTERGNPERVDIDLS
Sbjct: 494 YAFGAGDKGQLGVELVANQTERGNPERVDIDLS 526
>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
Length = 432
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/431 (88%), Positives = 409/431 (94%)
Query: 103 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162
MC KRAIFKPMT ERQDLKQ+CGGSWKLVLR+LLAGEACCRRE SQAIAGPGHSIAVTS
Sbjct: 1 MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTS 60
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
KG VYSFGSNSSGQLGHGTTEEEWRP+PIR+LQGIRIIQAAAGAGRTMLI+D+GQVYAFG
Sbjct: 61 KGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFG 120
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
KDSFGEAEYG QG+K V +P+LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +
Sbjct: 121 KDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGK 180
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGHHT+ ND+EPHPLLG LE+IPVVQIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG
Sbjct: 181 LGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHG 240
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+RTDEK PRLIEQFQ LNLQP+V++AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+
Sbjct: 241 TRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEA 300
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
PKVV AL +VKA+HVATGDYTTFVV+EDGDVYSFGCGESASLGHNA+ D +GNRHANVL
Sbjct: 301 APKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVL 360
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P+LVTSLKQ+NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTE
Sbjct: 361 NPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTE 420
Query: 523 RGNPERVDIDL 533
R NPE+VDIDL
Sbjct: 421 RVNPEQVDIDL 431
>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 439
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/440 (84%), Positives = 409/440 (92%), Gaps = 1/440 (0%)
Query: 95 ISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGP 154
+SELAALDMCQKRAIFKPMT+ ER+ KQ+CGGSWKLVLRF++AGEACCRRE SQAIAGP
Sbjct: 1 MSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGP 60
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHSIAVT+ G VY+FGSNSSGQLGHG+ EEEWRPR IRSLQGIRIIQAAAGAGRTML+SD
Sbjct: 61 GHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTMLVSD 120
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
AG+VYAFGKDSFGE EY QG+++VT+PQLVESLK+I++VQAAIGNFFTAVLSREG VYT
Sbjct: 121 AGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYT 180
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
FSWGND +LGH TEPNDV+PH L G LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCG
Sbjct: 181 FSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCG 240
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
LGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLG
Sbjct: 241 LGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGCLG 300
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HGNEECESVPKVV++L +V+A+HVATGDYTTFVVS+ GDVYSFGCGES+SLGHN I +G
Sbjct: 301 HGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGN 360
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
NRH NVL+P+LVTSLK+ NERV QISLTNSIYWNAHTFALT+SGKLYAFGAGDKGQLG
Sbjct: 361 -NRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGT 419
Query: 515 ELVNNQTERGNPERVDIDLS 534
ELV ++ERG PERV+IDLS
Sbjct: 420 ELVAQESERGTPERVEIDLS 439
>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
Length = 539
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/512 (74%), Positives = 437/512 (85%), Gaps = 2/512 (0%)
Query: 25 IVAPVPTFQRNQRHCFGESTP-GEFPLAASPSIVLHVLTACNLDPQDLAKLEATCSFFRQ 83
+ A + T QRNQR C+G S+ GEFPLA +PSIVLHVLT C LDPQDLA+LEATCSFFR
Sbjct: 28 VAALMQTSQRNQRLCYGSSSSHGEFPLATNPSIVLHVLTECCLDPQDLARLEATCSFFRH 87
Query: 84 PANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACC 143
ANF PD LS+SELAALDMC++RAIF+PMT ER+ LK+ CGGSWKLVLRFL AGE C
Sbjct: 88 AANFTPDVTLSLSELAALDMCKRRAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCY 147
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RRE QAIAGPGHSI VT G VY+FGS+SSGQLGHG+ +EEWRPR +RSLQG+RIIQA
Sbjct: 148 RREKIQAIAGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQAT 207
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG GRTMLISD G+VYAFGKDSFG+ EYG G+K + +PQ+VESL IFVVQAAIGNFFT
Sbjct: 208 AGVGRTMLISDTGRVYAFGKDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFT 267
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
AVLSREGRVYTFSWG DA+LGH TEP D +P L G LEN PVVQIAAGYCYLLAL CQ
Sbjct: 268 AVLSREGRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQS 327
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+GMAVYSVGCGLGGKLGHG+R+DE+ P++IE FQ L LQP+ VAAGAWHAAVV +DGRVC
Sbjct: 328 TGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVC 387
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWGWGRYGCLGHGNE+CE +PKVV++L VKA+HVATGDYTTFVV++ G+V+S GCGES+
Sbjct: 388 TWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESS 447
Query: 444 SLGH-NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
SLGH + +GQ NRHANVL P+LV+SLKQ NE+V+QISLTNS+ WNAHTFAL +SG+L+
Sbjct: 448 SLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLF 507
Query: 503 AFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
AFGAGDKGQLG EL++N++ERG PE VDIDLS
Sbjct: 508 AFGAGDKGQLGTELLDNESERGTPELVDIDLS 539
>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
Length = 508
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/508 (74%), Positives = 435/508 (85%), Gaps = 2/508 (0%)
Query: 29 VPTFQRNQRHCFGESTP-GEFPLAASPSIVLHVLTACNLDPQDLAKLEATCSFFRQPANF 87
+ T QRNQR C+G S+ GEFPLA +PSIVLHVLT C LDPQDLA+LEATCSFFR ANF
Sbjct: 1 MQTSQRNQRLCYGSSSSHGEFPLATNPSIVLHVLTECCLDPQDLARLEATCSFFRHAANF 60
Query: 88 APDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRREN 147
PD LS+SELAALDMC++RAIF+PMT ER+ LK+ CGGSWKLVLRFL AGE C RRE
Sbjct: 61 TPDVTLSLSELAALDMCKRRAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRREK 120
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
QAIAGPGHSI VT G VY+FGS+SSGQLGHG+ +EEWRPR +RSLQG+RIIQA AG G
Sbjct: 121 IQAIAGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAGVG 180
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
RTMLISD G+VYAFGKDSFG+ EYG G+K + +PQ+VESL IFVVQAAIGNFFTAVLS
Sbjct: 181 RTMLISDTGRVYAFGKDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLS 240
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
REGRVYTFSWG DA+LGH TEP D +P L G LEN PVVQIAAGYCYLLAL CQ +GMA
Sbjct: 241 REGRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMA 300
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYSVGCGLGGKLGHG+R+DE+ P++IE FQ L LQP+ VAAGAWHAAVV +DGRVCTWGW
Sbjct: 301 VYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGW 360
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
GRYGCLGHGNE+CE +PKVV++L VKA+HVATGDYTTFVV++ G+V+S GCGES+SLGH
Sbjct: 361 GRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGH 420
Query: 448 -NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ +GQ NRHANVL P+LV+SLKQ NE+V+QISLTNS+ WNAHTFAL +SG+L+AFGA
Sbjct: 421 LSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGA 480
Query: 507 GDKGQLGIELVNNQTERGNPERVDIDLS 534
GDKGQLG EL++N++ERG PE VDI+LS
Sbjct: 481 GDKGQLGTELLDNESERGTPELVDINLS 508
>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 432
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/432 (83%), Positives = 396/432 (91%)
Query: 103 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162
MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTS
Sbjct: 1 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTS 60
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
KG VY+FG N+SGQLGHG TE+E R +P+RSLQG+RIIQAAAGA RTMLISD G+VYA G
Sbjct: 61 KGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACG 120
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
K+SFGEAEYG QGTK VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 121 KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 180
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH TE DVEP PLLG LEN+PVVQIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG
Sbjct: 181 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 240
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
SRTDEK+PR+IEQFQ+LNLQP VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 241 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 300
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
VPKVV+ L+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+ D QGNRHANVL
Sbjct: 301 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVL 360
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+P +VTSLKQVNER+VQISLTNSIYWNAHTFALTESGKL+AFGAGD+GQLG EL NQ E
Sbjct: 361 SPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKE 420
Query: 523 RGNPERVDIDLS 534
R PE+VDIDLS
Sbjct: 421 RCVPEKVDIDLS 432
>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/551 (65%), Positives = 424/551 (76%), Gaps = 26/551 (4%)
Query: 1 MDATTS--GTPA-IQYHN-IPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSI 56
MD TTS +PA +Q H+ IP+ PI A+ ++ P F R +R C G S PGEF LA+ PSI
Sbjct: 1 MDTTTSSGSSPATLQLHSIIPENPIAALELS-FPPFLRLKRQCLGSSVPGEFFLASCPSI 59
Query: 57 VLHVLTACNLDPQDLAKLE---------ATCSFFRQPANFAPDYQLSISELAALDMCQKR 107
VLHVLT C+L P+DLAKLE ATCSFFR+PANF+PD+ LSISE+AALD+CQKR
Sbjct: 60 VLHVLTTCDLGPRDLAKLEASDAQLSFMATCSFFRKPANFSPDFDLSISEVAALDICQKR 119
Query: 108 AIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVY 167
AIFK M E ERQ++K++CGGSWKLVL+FLLAGE CRRE SQA+AGPGHSIAVTSKGVVY
Sbjct: 120 AIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCRREKSQALAGPGHSIAVTSKGVVY 179
Query: 168 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
SFG N SGQLG GTT++ W+P P+RSL GIRIIQAA RT +ISDAG+VYAFGK F
Sbjct: 180 SFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFVISDAGEVYAFGKVCFS 239
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
EA+ V TKL+T+PQ V+SL IFVVQAAIGN+FTA+LSREGRVYT SWGND RLGH T
Sbjct: 240 EAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAILSREGRVYTLSWGNDERLGHQT 299
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV---GCGLGGKLGHGSR 344
+ + P PLLG LENIPVVQIAAG+CYLLALA QP+GM+VYSV G G S
Sbjct: 300 DHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTGMSVYSVGCGLGGKLGHGLSDSD 359
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
EK+PRLI++F LLN++PV+V+AG WHAAVVG+DGRVCTWGWGR+GCLGHG EE E+ P
Sbjct: 360 ASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVCTWGWGRFGCLGHGTEEAENAP 419
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
KVV L DVKA+HVATG YTTFVVS+DG VYSFG G A+LG + + + N LTP
Sbjct: 420 KVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFGSG-GANLGQDDVDE-------NTLTP 471
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
+LV+SLK ER+V +SLTNS HTFA+TESG LYAFGAG++GQLG+EL N TER
Sbjct: 472 KLVSSLKDTKERMVHVSLTNSGNGTGHTFAMTESGTLYAFGAGNRGQLGVELGENLTERA 531
Query: 525 NPERV-DIDLS 534
P +V IDLS
Sbjct: 532 EPAKVAGIDLS 542
>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
Length = 535
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 314/542 (57%), Positives = 404/542 (74%), Gaps = 19/542 (3%)
Query: 1 MDATTSGT-PAIQYHNIPDQPITAIIVAPVPTF-QRNQRHCFGESTPGEFPLAASPSIVL 58
MD SGT P +Q+H+ D+ + +P+PT +R+QRHC G+ PGEFPLA SPSIVL
Sbjct: 5 MDTAASGTSPVLQFHSNADESTSH--SSPLPTLIERSQRHCCGDGIPGEFPLAVSPSIVL 62
Query: 59 HVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
HVL+AC+LDP+DLA LEATC+FF +PANFAP++ LS+ ELAA DMCQKR +FK M + ++
Sbjct: 63 HVLSACDLDPKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQKRTMFKLMKQEDQ 122
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
+ LKQ+CGGSWK VL+++L E + S+ IAGPGHSI ++S G VYSFG+N SGQLG
Sbjct: 123 ECLKQRCGGSWKHVLKYILVRE----KNGSRVIAGPGHSIVISSNGDVYSFGANCSGQLG 178
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
G +E+ +RP IRSLQGIRI QAA G+ TML+SD G VYAFGKD+F AE
Sbjct: 179 LGDSEDRFRPCIIRSLQGIRITQAAVGSRWTMLVSDTGSVYAFGKDNFRGAEVVDDAHIQ 238
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+T+P++VESLK +FVVQAAIG +F+AVLSREGRVYTFSWG + RLGH ++P+DVEP LL
Sbjct: 239 ITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKEERLGHSSDPSDVEPR-LL 297
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
LE++PV I+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG +T++ P+LIEQFQ
Sbjct: 298 SGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHGCKTNKGMPKLIEQFQS 357
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
L+ +PV +AAG WHAA +G DGRVCTWGWG GCLGHG+EE ++VP +V+ L DVKA+H+
Sbjct: 358 LSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKAVPTLVEGLRDVKAVHL 417
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+TG+YTTFVV+E+GDVYSFG GES D + + TP +V+SLK +N++VV
Sbjct: 418 STGEYTTFVVAENGDVYSFGSGESLVFQE----DDEAEEGPDFSTPSIVSSLKALNKKVV 473
Query: 479 QISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
QIS TN+ YW + HTFA+ +SG L AFG G +GQLG++L+ + P V I
Sbjct: 474 QISPTNASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQLGVKLLEGVEKVSVPMHVPIV 533
Query: 533 LS 534
L+
Sbjct: 534 LN 535
>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
Length = 634
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/541 (58%), Positives = 393/541 (72%), Gaps = 17/541 (3%)
Query: 1 MDATTSGT-PAIQYHNIPDQPITAIIVAPVPT-FQRNQRHCFGESTPGEFPLAASPSIVL 58
MDA SGT P +Q+H I D+P + +P+ T +R+QRHC+G TPGEFPLA SPSIVL
Sbjct: 102 MDAAASGTSPVMQFHGIVDEPPSH--SSPLHTALERSQRHCYGHETPGEFPLAVSPSIVL 159
Query: 59 HVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
HVL+ C LDP+DLA LEATC+FF +PANF P++ LS+ E+AA DMC KR + K M + ER
Sbjct: 160 HVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHKRPMVKLMAQQER 219
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
+ LKQ+CGGSWKLVL++++A E R S+ +AGPGHSI VT+KG YSFG+N GQLG
Sbjct: 220 EQLKQRCGGSWKLVLKYIVARE----RNYSRIVAGPGHSIVVTTKGDAYSFGANCWGQLG 275
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
G TE+ ++P IRSLQGI+I QAA G+ +TML+SD G VYAFGK SF E
Sbjct: 276 LGDTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYAFGKGSFVWEELS-DAADH 334
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG RLGH ++P+DVEP L
Sbjct: 335 ITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEPRLLS 394
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG + ++ +LIE F
Sbjct: 395 GPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTTKLIEHFLT 454
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
L+ PV VAAG WHAA +G DGRVCTWGWG GCLGHG+EE +P VVQ L++VKA+HV
Sbjct: 455 LSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVKAVHV 514
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+TG+YTTFVVS++GD YSFG ES ++G + + + TP LV SLK +N++ V
Sbjct: 515 STGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS--TPSLVESLKVLNDKAV 572
Query: 479 QISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
QIS TNS YW HTFAL ESGKLYAFG G KGQLG++L Q NPERV ID
Sbjct: 573 QISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPERVPID 632
Query: 533 L 533
L
Sbjct: 633 L 633
>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 537
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 316/541 (58%), Positives = 392/541 (72%), Gaps = 17/541 (3%)
Query: 1 MDATTSGT-PAIQYHNIPDQPITAIIVAPVPT-FQRNQRHCFGESTPGEFPLAASPSIVL 58
MDA SGT P +Q+H I D+P + +P+ T +R+QRHC+G TPGEFPLA SPSIVL
Sbjct: 5 MDAAASGTSPVMQFHGIVDEPPSH--SSPLHTALERSQRHCYGHETPGEFPLAVSPSIVL 62
Query: 59 HVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
HVL+ C LDP+DLA LEATC+FF +PANF P++ LS+ E+AA DMC KR + K M + ER
Sbjct: 63 HVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHKRPMVKLMAQQER 122
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
+ LKQ+CGGSWKLV ++++A E R S+ +AGPGHSI VT+KG YSFG+N GQLG
Sbjct: 123 EQLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTTKGDAYSFGANCWGQLG 178
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
G TE+ ++P IRSLQ I+I QAA G+ +TML+SD G VYAFGK SF E
Sbjct: 179 LGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFGKGSFVWEELS-DAADH 237
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG RLGH ++P+DVEP L
Sbjct: 238 ITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEPRLLS 297
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG + ++ P+LIE F
Sbjct: 298 GPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTPKLIEHFLT 357
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
L+ PV VAAG WHAA +G DGRVCTWGWG GCLGHG+EE +P VVQ L++VKA+HV
Sbjct: 358 LSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVKAVHV 417
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+TG+YTTFVVS++GD YSFG ES ++G + + + TP LV SLK +N++ V
Sbjct: 418 STGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS--TPSLVESLKVLNDKAV 475
Query: 479 QISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
QIS TNS YW HTFAL ESGKLYAFG G KGQLG++L Q NPERV ID
Sbjct: 476 QISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPERVPID 535
Query: 533 L 533
L
Sbjct: 536 L 536
>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
Length = 609
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 316/541 (58%), Positives = 392/541 (72%), Gaps = 17/541 (3%)
Query: 1 MDATTSGT-PAIQYHNIPDQPITAIIVAPVPT-FQRNQRHCFGESTPGEFPLAASPSIVL 58
MDA SGT P +Q+H I D+P + +P+ T +R+QRHC+G TPGEFPLA SPSIVL
Sbjct: 77 MDAAASGTSPVMQFHGIVDEPPSH--SSPLHTALERSQRHCYGHETPGEFPLAVSPSIVL 134
Query: 59 HVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
HVL+ C LDP+DLA LEATC+FF +PANF P++ LS+ E+AA DMC KR + K M + ER
Sbjct: 135 HVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHKRPMVKLMAQQER 194
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
+ LKQ+CGGSWKLV ++++A E R S+ +AGPGHSI VT+KG YSFG+N GQLG
Sbjct: 195 EQLKQRCGGSWKLVFKYIVARE----RNYSRIVAGPGHSIVVTTKGDAYSFGANCWGQLG 250
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
G TE+ ++P IRSLQ I+I QAA G+ +TML+SD G VYAFGK SF E
Sbjct: 251 LGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFGKGSFVWEELS-DAADH 309
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG RLGH ++P+DVEP L
Sbjct: 310 ITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEPRLLS 369
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG + ++ P+LIE F
Sbjct: 370 GPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTPKLIEHFLT 429
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
L+ PV VAAG WHAA +G DGRVCTWGWG GCLGHG+EE +P VVQ L++VKA+HV
Sbjct: 430 LSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVKAVHV 489
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+TG+YTTFVVS++GD YSFG ES ++G + + + TP LV SLK +N++ V
Sbjct: 490 STGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS--TPSLVESLKVLNDKAV 547
Query: 479 QISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
QIS TNS YW HTFAL ESGKLYAFG G KGQLG++L Q NPERV ID
Sbjct: 548 QISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPERVPID 607
Query: 533 L 533
L
Sbjct: 608 L 608
>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
gi|194702102|gb|ACF85135.1| unknown [Zea mays]
gi|194704788|gb|ACF86478.1| unknown [Zea mays]
gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
gi|219884475|gb|ACL52612.1| unknown [Zea mays]
gi|223949899|gb|ACN29033.1| unknown [Zea mays]
gi|224030775|gb|ACN34463.1| unknown [Zea mays]
gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 3 [Zea mays]
Length = 535
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 311/543 (57%), Positives = 399/543 (73%), Gaps = 21/543 (3%)
Query: 1 MDATTSGT-PAIQYHNIPDQPITAIIVAPVPTF-QRNQRHCFGESTPGEFPLAASPSIVL 58
MD SGT P +Q+H+ D+ I +P+ T QR+QRHC+G+ +PGEFPLA SPSIVL
Sbjct: 5 MDTAASGTSPVMQFHSNADESIAH--SSPLATLIQRSQRHCYGDGSPGEFPLAVSPSIVL 62
Query: 59 HVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
HVL++C+L P+DLA LEATC FF +PA+FAPD+ LS+ ELAA DMCQKR +FK M + ++
Sbjct: 63 HVLSSCDLGPKDLANLEATCVFFGKPASFAPDFALSLPELAAFDMCQKRTMFKQMKQEDQ 122
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
+ LKQ+CGGSWK VL ++L E + S+ IAGPGHSI +TS G VYSFG+N SGQLG
Sbjct: 123 ECLKQRCGGSWKHVLGYILVRE----KNGSRVIAGPGHSIIITSNGDVYSFGANCSGQLG 178
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
G +E+ ++P IRSLQGIRI QAA G+ TML+SD G VY+FGK+ F AE V G
Sbjct: 179 LGDSEDRFKPCVIRSLQGIRITQAAVGSRCTMLVSDTGSVYSFGKEDFRVAEL-VDGAHF 237
Query: 239 -VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+T+P++ ESLK +FVVQAAIG +F+AVLSREGRVYTFSWG RLGH ++P+DVEP L
Sbjct: 238 QITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKAERLGHSSDPSDVEPR-L 296
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
L LE++PV I+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG +T+ P+L+EQFQ
Sbjct: 297 LPGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHGCKTNNGMPKLVEQFQ 356
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
++ +PV +AAG WHA +G DGRVCTWGWG GCLGHG+EEC +VP VV+ L DVKA+H
Sbjct: 357 SMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDEECRAVPTVVEGLRDVKAVH 416
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
V+TG+YTTFVV+E+GDVYSFG GES + D + + TP +V+SLK +N++V
Sbjct: 417 VSTGEYTTFVVAENGDVYSFGSGESLAFQ----LDDEAEEEPDSSTPSIVSSLKDLNKKV 472
Query: 478 VQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
VQIS TN+ YW + HTFA+ +SG + AFG G +GQLG++L + P V I
Sbjct: 473 VQISHTNASYWMNSEMGHPHTFAVMDSGDVCAFGGGVRGQLGVKLHEGVEKVRVPMNVPI 532
Query: 532 DLS 534
L+
Sbjct: 533 GLN 535
>gi|224118330|ref|XP_002317792.1| predicted protein [Populus trichocarpa]
gi|222858465|gb|EEE96012.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/328 (85%), Positives = 294/328 (89%), Gaps = 10/328 (3%)
Query: 1 MDATTSGTPAIQYHNIPDQPIT--AIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVL 58
MDATTSGTP IQYHNI DQP+T AI+ PV T+QRNQRHCFG+ PGEFPLA +PSIVL
Sbjct: 1 MDATTSGTPTIQYHNINDQPVTVTAIVAVPVSTYQRNQRHCFGDLIPGEFPLATNPSIVL 60
Query: 59 HVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAER 118
HVLTACNLDPQDLAKLEAT NF PD +LSISELAALDMCQKRAIFKPM ER
Sbjct: 61 HVLTACNLDPQDLAKLEAT--------NFPPDNELSISELAALDMCQKRAIFKPMAPEER 112
Query: 119 QDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG 178
QDLKQ+CGGSWKLVLRFLLAGEACCRRE SQAIAGPGHSIAVTS G VYSFGSNSSGQLG
Sbjct: 113 QDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTSNGAVYSFGSNSSGQLG 172
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
HGTTEEEWRPR IRSL+GIRIIQAAAG GRTMLISDAG+VYAFGKDSFGEAEYG QG+K+
Sbjct: 173 HGTTEEEWRPRQIRSLRGIRIIQAAAGPGRTMLISDAGRVYAFGKDSFGEAEYGAQGSKM 232
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
VT+PQLVESLKNIFVVQA IGNFFTAVLSREGRVYTFSWGND R+GH TEPNDVEPHPLL
Sbjct: 233 VTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGNDGRIGHQTEPNDVEPHPLL 292
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGM 326
G LENIPVVQIAAGYCYLLALAC PSG+
Sbjct: 293 GALENIPVVQIAAGYCYLLALACHPSGI 320
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
AG H+ V +G V ++G G LGHG E E P+ +++L ++ I A G T +
Sbjct: 146 AGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRIIQAAAGPGRTML 205
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
+S+ G VY+FG S G A QG++ V TPQLV SLK I + ++
Sbjct: 206 ISDAGRVYAFG---KDSFGE-AEYGAQGSKM--VTTPQLVESLK-------NIFVVQAVI 252
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
N T L+ G++Y F G+ G++G + N E
Sbjct: 253 GNFFTAVLSREGRVYTFSWGNDGRIGHQTEPNDVE 287
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
S AVYS G G+LGHG+ +E PR I + + + + AAG ++ GRV
Sbjct: 156 SNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRI--IQAAAGPGRTMLISDAGRVY 213
Query: 384 TWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+G +G +G + + V P++V++L ++ + G++ T V+S +G VY+F G
Sbjct: 214 AFGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGN 273
Query: 442 SASLGH 447
+GH
Sbjct: 274 DGRIGH 279
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
QA G + ++ G VY+F + +LGH T + P + +L I ++Q AAG
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIR-SLRGIRIIQAAAGPG 201
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWH 372
+ ++ VY+ G G+ +G++ + P+L+E + N+ V G +
Sbjct: 202 RTMLIS---DAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESLK--NIFVVQAVIGNFF 256
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATG 421
AV+ ++GRV T+ WG G +GH E + P ++ AL ++ + +A G
Sbjct: 257 TAVLSREGRVYTFSWGNDGRIGHQTEPNDVEPHPLLGALENIPVVQIAAG 306
>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Brachypodium distachyon]
Length = 548
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/542 (55%), Positives = 377/542 (69%), Gaps = 17/542 (3%)
Query: 1 MDATTSGTP-AIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLH 59
MDAT S IQ+H I + ++ +P + + HC +F L +PS++L
Sbjct: 5 MDATGSKAALVIQFHTIVND-ASSRSSSPDREAEGTKHHCSVNEATEQFLLTVNPSVLLR 63
Query: 60 VLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQ 119
VL++C LDP+DLA LEATC FFR PANF PD LS+ ELAA DMCQ+RA+FKPM E++
Sbjct: 64 VLSSCELDPKDLAALEATCKFFRDPANFPPDLALSLPELAAFDMCQERAMFKPMKPKEKE 123
Query: 120 DLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH 179
LKQ+CGGSWKLVLR++L GE RRE SQ IAGPGHSI VT+KG VYSFG N SGQLG
Sbjct: 124 WLKQRCGGSWKLVLRYILVGEKNYRREKSQVIAGPGHSIVVTAKGDVYSFGVNCSGQLGL 183
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE-YGVQGTKL 238
G E +++P I SLQGIRI QAA G RTML+SD G VY FG D+FG + YG
Sbjct: 184 GDRENKFKPCLISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNC 243
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V SP+L+ESLK +FVVQA+IG +F+AVLSREGRVYTFSWG RLGH +E +DVEP L
Sbjct: 244 VNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDVEPRLLS 303
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G L+++ V QIAAG CYLL L+ P+GM+VYS+GCGLGGKLGHG++ E P+LI FQ
Sbjct: 304 GPLDDVLVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGNKDFEGVPKLIGHFQA 363
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIH 417
N++P+ ++AGAWHAAV+ +DGRV TWGW GCLGHG+ E+C ++P+ V+ LN+VKA+H
Sbjct: 364 FNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLNNVKAVH 423
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN--VLTPQLVTSLKQVNE 475
V+ G++ TFVV+++GDVYSFG S +LG Q N N VL P+ T L +NE
Sbjct: 424 VSAGEWCTFVVADNGDVYSFGFRGSHNLGF------QDNDAENEDVLPPKPATLLADLNE 477
Query: 476 RVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
R VQIS T++ WN HT AL ESG +YAFG G GQLG++LV + P +V
Sbjct: 478 RFVQISPTSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGVKLVEGKEAMPTPVQVA 537
Query: 531 ID 532
ID
Sbjct: 538 ID 539
>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
Length = 529
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/547 (51%), Positives = 362/547 (66%), Gaps = 40/547 (7%)
Query: 1 MDATTSGTPAI-QYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLH 59
MD T S + + HNI ++ + P+ Q + PL ++PS++LH
Sbjct: 8 MDTTDSKASVVTKVHNIVNESTSH----SCPSLQ-------------QIPLTSNPSLLLH 50
Query: 60 VLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQ 119
VL++ L+P+DLA LE C FFR+PA F PD LS+ ELAA D C ++AIFK M + E+
Sbjct: 51 VLSSYGLEPKDLAALEVACQFFRRPAKFEPDATLSLPELAAYDTCCQKAIFKSMEQKEKD 110
Query: 120 DLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH 179
LKQ+CGGSWKLVL +LL GE R S+ +AGPGH+IAVTSKG VYSFG+NSSGQLG
Sbjct: 111 SLKQRCGGSWKLVLTYLLVGEKNYHRGKSRVVAGPGHTIAVTSKGDVYSFGANSSGQLGL 170
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G TEE+ +P IRSLQGIRI QAA G+ RTML+SD G VY FG+D F E+ T
Sbjct: 171 GNTEEQCKPCLIRSLQGIRITQAAVGSRRTMLVSDTGSVYVFGQDIFAGLEFAGDYT--- 227
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
+SP++VESLK IFVVQA++G F+AVLSREG+VYTF WG+DARLGHH++P D+EP L
Sbjct: 228 SSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWGHDARLGHHSDPTDLEPRLLSV 287
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
++ V+QIAAG CYLL L QP+GM+VYSVGCG GGKLGHG PR+I+QF+ L
Sbjct: 288 PPKDALVMQIAAGNCYLLMLVYQPTGMSVYSVGCGEGGKLGHGCTISLTIPRMIQQFKTL 347
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGW-GRYGCLGHGN-EECESVPKVVQALNDVKAIH 417
++PV V+AGA+H AV+ DGRV TWGW GCLGH + +E +P V L VKA +
Sbjct: 348 KVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLGHDDKQEYVVLPTAVAGLGSVKATY 407
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK-QVNER 476
++TG +TFVV+++GDVYSFGC S +LG A + +V P+L +L +NE+
Sbjct: 408 ISTGYCSTFVVTDNGDVYSFGCDHSRNLGVKA------DVGEDVRIPKLAANLNVSLNEK 461
Query: 477 VVQISLTNSIYW----------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
VVQIS TN+ W HT LTESG+LY+ G G +GQLG++L Q R P
Sbjct: 462 VVQISATNTWDWPSRSQNRITSECHTCVLTESGRLYSLGRGSEGQLGVKLAEGQKIRPAP 521
Query: 527 ERVDIDL 533
+ V IDL
Sbjct: 522 DGVAIDL 528
>gi|388507174|gb|AFK41653.1| unknown [Lotus japonicus]
Length = 136
Score = 232 bits (592), Expect = 3e-58, Method: Composition-based stats.
Identities = 102/115 (88%), Positives = 113/115 (98%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ+LNLQP+VVAAGAWHAAVVG+DGRVCTW
Sbjct: 1 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTW 60
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
GWGRYGCLGHGNE+CESVPKVV+AL +VKA++VATGDYTTFVVS+DGDVYSFGCG
Sbjct: 61 GWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCG 115
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGK 223
VYS G G+LGHGT +E PR I Q + + + AAGA ++ G+V +G
Sbjct: 3 VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGW 62
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G +G + + V P++VE+L N+ V A G++ T V+S +G VY+F GN
Sbjct: 63 GRYGCLGHGNEDCESV--PKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCGN 116
Score = 49.3 bits (116), Expect = 0.005, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 386 GWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
G G G LGHG E P++++ +++ + VA G + VV +DG V ++G G
Sbjct: 7 GCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYG 66
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH GN + P++V +L V V + TF +++ G +Y+
Sbjct: 67 CLGH-------GNEDCESV-PKVVEALTNVKAVYVATG-------DYTTFVVSDDGDVYS 111
Query: 504 FGAGDKGQLGIEL 516
FG G+ GI L
Sbjct: 112 FGCGNLLVSGIML 124
Score = 48.9 bits (115), Expect = 0.006, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H+ V G V ++G G LGHG + E P+ + +L ++ + A G T +
Sbjct: 43 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFV 102
Query: 212 ISDAGQVYAFG 222
+SD G VY+FG
Sbjct: 103 VSDDGDVYSFG 113
Score = 43.5 bits (101), Expect = 0.28, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 242 PQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 298
P+L+E + N+ + A G + AV+ ++GRV T+ WG LGH E D E P ++
Sbjct: 25 PRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNE--DCESVPKVV 82
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
L N+ V +A G ++ VYS GCG
Sbjct: 83 EALTNVKAVYVATGDYTTFVVS---DDGDVYSFGCG 115
>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 491
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 231/468 (49%), Gaps = 27/468 (5%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L VLT+ L+ DL LE TC F P S+ + AA +C + + M E
Sbjct: 17 LILEVLTSGRLNAHDLVCLELTCKLFGGSHELYPLKFRSLVDFAAFQLCISHSTYSGMGE 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCR-----RENSQAIAGPGHSIAVTSKGVVYSFG 170
++ L +C G WK V RFL E N Q G H++ + S G VYS G
Sbjct: 77 DSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGNMQIATGRYHTLLI-SNGSVYSCG 135
Query: 171 SNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 229
S+ G LGHG+ T + I I + Q +A ++ +GQV+ G +S
Sbjct: 136 SSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVTQSGQVFTCGDNSSFCC 195
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 289
+ ++ P+LVE+L I Q ++G+ F+ L+R+G VYT +LGH
Sbjct: 196 GHRDTSCRIF-RPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTL 254
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
P + +E V+QIAAG Y+LA+ + VYS G G LGHG + +E
Sbjct: 255 EGPTPKIVQRLVEIGSVIQIAAGPSYVLAVV---NDGRVYSFGSGSNFCLGHGEQHNEFQ 311
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
PR+++ F+L N+ V V+AG HA + +G V TWG G G LGHG+E +++P+ + +
Sbjct: 312 PRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNS 371
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHANVLTPQLV 467
L + A+ V TFV+ + G VY FG SLG ++D VL P+ +
Sbjct: 372 LKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSD-------KVLRPRSL 424
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
SL+ RV QIS +Y HT +TE GK++ FG ++ QLG E
Sbjct: 425 DSLRV--HRVSQIS--TGLY---HTVVVTEKGKIFGFGDNERAQLGHE 465
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S G+VY++G G LGHG ++ P+P+ SL+ +Q A +T +
Sbjct: 330 AGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFV 389
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ D G VY FG FG + +G + V P+ ++SL+ V Q + G + T V++ +G
Sbjct: 390 LVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKG 449
Query: 271 RVYTFSWGNDARLGHHT-----EPNDVEPHPL 297
+++ F A+LGH + EP ++ H L
Sbjct: 450 KIFGFGDNERAQLGHESLRGCLEPTEIFIHDL 481
>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 485
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 235/485 (48%), Gaps = 35/485 (7%)
Query: 41 GESTPGEFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELA 99
GE P F + P ++ VLT+ L DLA+LEATC R ++E A
Sbjct: 3 GEKAPRAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRALR-----------PLAEHA 51
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGP 154
A +C+ R F M A R +L +CGGSWK VLRFL + E N Q G
Sbjct: 52 ASRLCEARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGNMQVATGR 111
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLIS 213
H++ V V YS GS+ G LGHG + S + R++ +A ++
Sbjct: 112 YHTLLVHDSSV-YSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVT 170
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
+ GQV+ G +S +G G + + P +E+LK F Q A G FT +L+REG+VY
Sbjct: 171 ETGQVFTCGDNSSLCCGHGDVG-RTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVY 229
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
T +LGH + P + + PVVQ+AAG Y A+ + V+S G
Sbjct: 230 TCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGT---VHSFGS 286
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
LGHG + +E PR I+ F+ N+ V V+AG HA + G V TWG G G L
Sbjct: 287 CTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGAL 346
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GHG+E ++ P+++ +L A+ V TFV++++G V +FG SLG D
Sbjct: 347 GHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLG---FPDR 403
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ + V+ P ++ SL+ V QIS +Y HT A+T G ++ FG ++ QLG
Sbjct: 404 ESSD--KVMKPCVLDSLR--GHYVSQIS--TGLY---HTVAVTNKGIVFGFGDNERAQLG 454
Query: 514 IELVN 518
E +
Sbjct: 455 QEYIR 459
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 144 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
+R N + AG H++A+ + G VY++G G LGHG ++ P I SL+G +
Sbjct: 310 KRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAV 369
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIG 259
Q A +T +++D G V AFG FG + + + V P +++SL+ +V Q + G
Sbjct: 370 QVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTG 429
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
+ T ++ +G V+ F A+LG ++P ++ ++ + IAA
Sbjct: 430 LYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFHKSSMEDIAIAA 481
>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 236/480 (49%), Gaps = 41/480 (8%)
Query: 47 EFPLAASPSIVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQK 106
+FP ++ +LT L DL LE T F P S+ + AA +C
Sbjct: 12 DFP----SHLIFEILTIGRLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFAAHQLCVS 67
Query: 107 RAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGE---------ACCRRENSQAIAGPGHS 157
++ M +++L +CGG+WK VLRFL A E AC N Q G H+
Sbjct: 68 HRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSAC----NMQVTTGRYHT 123
Query: 158 IAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+ + V YS GS+ G LGHG TT+ R IR ++Q +A + +
Sbjct: 124 LLIRDSSV-YSCGSSLCGVLGHGAETTQCVAFTR-IRFPSLANVVQVSASHNHAAFVLQS 181
Query: 216 GQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+V+ G +S G + T + + P+LVE+LK + Q ++G FT L+R+G++YT
Sbjct: 182 GEVFTCGDNS--SFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYT 239
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+LGH + P ++ LE I PVVQIAAG Y+LA+ VYS G
Sbjct: 240 CGSNTHGQLGHGDTLDRPTP-KIIELLEGIGPVVQIAAGPSYVLAVT---DNGVVYSFGY 295
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G LGHG + DE PR I+ F+ ++ V V+AG HA + G V +WG G G L
Sbjct: 296 GSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGAL 355
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GHG+E +++P +V L A+ TFV+ +DG VY FGC +G ++
Sbjct: 356 GHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGC-----MGFGSLGFP 410
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ V+TP+++ SL+ RV QIS +Y HT +T G+++ FG ++ QLG
Sbjct: 411 DRDITEKVMTPRVLDSLRA--HRVSQIS--TGLY---HTVVVTNQGQMFGFGDNERVQLG 463
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 144 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
RR++ + AG H++A+ S G VYS+G G LGHG ++ P + L+ +
Sbjct: 319 RRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAV 378
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 259
QA A +T ++ D G VY FG FG + + T+ V +P++++SL+ V Q + G
Sbjct: 379 QACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTG 438
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+ T V++ +G+++ F +LGH T ++P +
Sbjct: 439 LYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIF 477
>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 497
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 239/488 (48%), Gaps = 36/488 (7%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L +L L DL LE T F P S+ + AA +C +++ M
Sbjct: 17 LILEILMTGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFAAFQLCASHSVYTGMLW 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFG 170
+++L +CGG+WK VLRFLLA G N Q G H++ + S VYS G
Sbjct: 77 NAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGRYHTLLI-SNSSVYSCG 135
Query: 171 SNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 229
S+ G LGHG + + + R++Q +A I ++G+V+ G +S
Sbjct: 136 SSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILESGEVFTCGDNS--SF 193
Query: 230 EYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
G Q T + + P+ VE+LK + Q A G FT L+R G VY+ +LGH
Sbjct: 194 CCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDT 253
Query: 289 PNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ P ++ + E I V QIAAG Y+LA+ SG+ VYS G G LGHG + +E
Sbjct: 254 LDRPTP-KIIESFEGIGSVAQIAAGPSYVLAVT--DSGV-VYSFGSGSNFCLGHGEQHNE 309
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
HPR I+ F+ NL V V+AG H + G V TWG G G LGHG+E +++P+ +
Sbjct: 310 FHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPL 369
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHANVLTPQ 465
+L A+ V TFV+ + G V+ FG SLG ++D V+ P+
Sbjct: 370 NSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSD-------KVMRPR 422
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 525
++ SL+ RV QIS +Y HT A+T G+++ FG ++ QLG + T RG
Sbjct: 423 ILDSLRA--HRVSQIS--TGLY---HTVAVTSQGQVFGFGDNERAQLG-----HDTLRGC 470
Query: 526 PERVDIDL 533
E +I L
Sbjct: 471 LEPTEIFL 478
>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 241/491 (49%), Gaps = 47/491 (9%)
Query: 41 GESTPGEFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELA 99
GE P F + P ++ VLT+ L DLA+LEATC R ++E A
Sbjct: 4 GEKAPRAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRALR-----------PLAEHA 52
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGP 154
A +C RA F M A R +L ++CGGSWK VLRFL + G N Q G
Sbjct: 53 ASRLCAARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGR 112
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTML 211
H++ V V YS GS+ G LGHG TT+ R P SL R++ +A
Sbjct: 113 YHTLLVHDSSV-YSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAF 169
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+++ G+V+ G +S G E G + + P +++LK I Q A G FT +L+
Sbjct: 170 VTELGEVFTCGDNSSLCCGHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTT 225
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMA 327
+G+VYT +LGH + P ++ E + PVVQ+AAG Y A+ +
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVTDDGT--- 281
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G LGHG + DE PR I+ F+ N+ V V+AG HA + G V TWG
Sbjct: 282 VYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGR 341
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G G LGHG+E ++ P+++ +L A+ V TFV++++G V++FG SLG
Sbjct: 342 GYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGF 401
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
V+ P+++ SL+ + V QIS +Y HT A+T G ++ FG
Sbjct: 402 PDRGSSD-----KVMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVTNRGIVFGFGDN 449
Query: 508 DKGQLGIELVN 518
++ QLG E +
Sbjct: 450 ERAQLGQEYIR 460
>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 485
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 232/491 (47%), Gaps = 43/491 (8%)
Query: 47 EFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQ 105
F + PS +VL +L + L DL LE T F P S+ + AA +C
Sbjct: 7 HFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFAAFQLCA 66
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHSIAV 160
F M +++L +CGG+WK VLRFL + E + N Q G H++ +
Sbjct: 67 SHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGKYHTLLI 126
Query: 161 TSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
S VYS GS G LG G+ T + P P R++ +A +
Sbjct: 127 -SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLP-------RVVHVSASFNHAAFV 178
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+G+V+ G +S + T+ + P+LVESLK I Q A G FT L+R+G V
Sbjct: 179 MQSGEVFTCGDNSSSCCGH-RDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHV 237
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSV 331
YT +LGH D + P +E + VVQIAAG Y+L++ VYS
Sbjct: 238 YTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTVYSF 290
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G LGHG + DE PR I++F+ + V V+AG HA + +G V TWG G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCG 350
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHG+E ++ P+++ +L + A+ V TFV+ G VY FG S+G ++
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFG-----SMGFGSLG 405
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
VL P+++ +L+ V QIS +Y HT +T G+++ FG ++ Q
Sbjct: 406 FLDRRVSDKVLKPRILDTLRA--HHVSQIS--TGLY---HTVVITSRGQIFGFGDNERAQ 458
Query: 512 LGIELVNNQTE 522
LG + + + E
Sbjct: 459 LGHDTLRSCLE 469
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S G VY++G G LGHG E+ P + SL+ +Q A +T +
Sbjct: 327 AGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFV 386
Query: 212 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ ++G VY FG FG + + + V P+++++L+ V Q + G + T V++ G
Sbjct: 387 LVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRG 446
Query: 271 RVYTFSWGNDARLGHHTEPNDVEP 294
+++ F A+LGH T + +EP
Sbjct: 447 QIFGFGDNERAQLGHDTLRSCLEP 470
>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
Length = 907
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 243/487 (49%), Gaps = 41/487 (8%)
Query: 41 GESTPGEFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELA 99
GE P F + P ++ VLT+ L DLA+LEATC R ++E A
Sbjct: 4 GEKAPRAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRALR-----------PLAEHA 52
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGP 154
A +C RA F M A R +L ++CGGSWK VLRFL + G N Q G
Sbjct: 53 ASRLCAARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGR 112
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTML 211
H++ V V YS GS+ G LGHG TT+ R P SL R++ +A
Sbjct: 113 YHTLLVHDSSV-YSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAF 169
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+++ G+V+ G +S +G G + + P +++LK I Q A G FT +L+ +G+
Sbjct: 170 VTELGEVFTCGDNSSLCCGHGEVG-RTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQ 228
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYS 330
VYT +LGH + P ++ E + PVVQ+AAG Y A+ VYS
Sbjct: 229 VYTCGSNTHGQLGHGDTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVT---DDGTVYS 284
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G LGHG + DE PR I+ F+ N+ V V+AG HA + G V TWG G
Sbjct: 285 FGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYC 344
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+E ++ P+++ +L A+ V TFV++++G V++FG SLG
Sbjct: 345 GALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFP-- 402
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G ++ V+ P+++ SL+ + V QIS +Y HT A+T G ++ FG ++
Sbjct: 403 DRGSSDK---VMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVTNRGIVFGFGDNERA 452
Query: 511 QLGIELV 517
QLG E +
Sbjct: 453 QLGQEYI 459
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G H++AVT++G+V+ FG N QLG +P I + + I AA +G
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIAAPSG 484
Query: 208 R 208
R
Sbjct: 485 R 485
>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
Length = 485
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 232/491 (47%), Gaps = 43/491 (8%)
Query: 47 EFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQ 105
F + PS +VL +L + L DL LE T F P S+ AA +C
Sbjct: 7 HFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCA 66
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHSIAV 160
+ M +++L +CGG+WK VLRFL + E + N Q G H++ +
Sbjct: 67 SHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLI 126
Query: 161 TSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
S VYS GS G LG G+ T ++ P R++ +A +
Sbjct: 127 -SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLA-------RVVHVSASFNHAAFV 178
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+G+V+ G +S + T+ + P+LVESLK I Q A G FT L+R+G V
Sbjct: 179 MQSGEVFTCGDNSSSCCGHR-DTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHV 237
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSV 331
YT +LGH D + P +E + VVQIAAG Y+L++ VYS
Sbjct: 238 YTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTVYSF 290
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G LGHG + DE PR I++F+ + V V+AG HA + +G V TWG G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCG 350
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHG+E ++ P+++ +L + + V TFV+ + G VY FG S+G ++
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFG-----SMGFGSLG 405
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
VL P+++ +L+ V QIS +Y HT +T G+++ FG ++ Q
Sbjct: 406 FLDRRVSGKVLKPRILDTLR--THHVSQIS--TGLY---HTVVITSRGQIFGFGDNERAQ 458
Query: 512 LGIELVNNQTE 522
LG +++ + E
Sbjct: 459 LGHDILRSCLE 469
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S G VY++G G LGHG E+ P + SL+ ++Q A +T +
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFV 386
Query: 212 ISDAGQVYAFGKDSFGEAEY---GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ D+G VY FG FG + V G V P+++++L+ V Q + G + T V++
Sbjct: 387 LVDSGSVYGFGSMGFGSLGFLDRRVSGK--VLKPRILDTLRTHHVSQISTGLYHTVVITS 444
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEP 294
G+++ F A+LGH + +EP
Sbjct: 445 RGQIFGFGDNERAQLGHDILRSCLEP 470
>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
Length = 488
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 236/489 (48%), Gaps = 38/489 (7%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L VLT+ L DL LE T F F P S+++ AA +C ++ M
Sbjct: 17 LILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYAASQLCSMHPVYVGMGL 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSIAVTSKGVVYSFGS 171
+++L C G+WK + FL + E E SQ IA + + + VYS G
Sbjct: 77 TTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNSKVYSCGV 136
Query: 172 NSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 230
+ SG L HG+ T + PI ++ Q +A + + +GQV G +S
Sbjct: 137 SLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCG 196
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
+ + ++ + P+LVE+LK Q A G FT LSREG YT +LGH
Sbjct: 197 H-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGH----G 251
Query: 291 DVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
D P+ +E + PVVQIAAG Y+LAL S VYS G G LGHG + D
Sbjct: 252 DTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGS---VYSFGSGSNFCLGHGEQQD 308
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
E PR+I+ F+ + + V+AG HA + +GRV TWG G G LGHG+E + P+V
Sbjct: 309 ELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQV 368
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHANVLTP 464
+ LN+ A+ V TFV+ E G +Y FG SLG ++D VL P
Sbjct: 369 LVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD-------KVLRP 421
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
+++ LK RV Q+S +Y HT +T+ G+++ FG ++ QLG + + RG
Sbjct: 422 RVLECLKP--HRVSQVS--TGLY---HTIVVTQRGRIFGFGDNERAQLG-----HDSLRG 469
Query: 525 NPERVDIDL 533
E +I L
Sbjct: 470 CLEPTEIFL 478
>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 231/491 (47%), Gaps = 43/491 (8%)
Query: 47 EFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQ 105
F + PS +VL +L + L DL LE T F P S+ AA +C
Sbjct: 7 HFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCA 66
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHSIAV 160
+ M +++L +CGG+WK VLRFL + E + N Q G H++ +
Sbjct: 67 SHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLI 126
Query: 161 TSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
S VYS GS G LG G+ T ++ P R++ +A +
Sbjct: 127 -SNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLA-------RVVHVSASFNHAAFV 178
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+G+V+ G +S + T+ + P+LVESLK I Q A G FT L+R+G V
Sbjct: 179 MQSGEVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHV 237
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSV 331
YT +LGH D + P +E + VVQIAAG Y+L++ VYS
Sbjct: 238 YTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYILSVT---ENGTVYSF 290
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G LGHG + DE PR I++F+ + V V+AG HA + +G V TWG G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCG 350
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHG+E ++ P+++ +L + + V TFV+ + G VY FG S+G ++
Sbjct: 351 ALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFG-----SMGFGSLG 405
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
VL P+++ +L+ V QIS +Y HT +T G+++ FG ++ Q
Sbjct: 406 FLDRRVSDKVLKPRILDTLR--THHVSQIS--TGLY---HTVVITSRGQIFGFGDNERAQ 458
Query: 512 LGIELVNNQTE 522
LG + + + E
Sbjct: 459 LGHDTLRSCLE 469
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S G VY++G G LGHG E+ P + SL+ ++Q A +T +
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFV 386
Query: 212 ISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ D+G VY FG FG + + + V P+++++L+ V Q + G + T V++ G
Sbjct: 387 LVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRG 446
Query: 271 RVYTFSWGNDARLGHHTEPNDVEP 294
+++ F A+LGH T + +EP
Sbjct: 447 QIFGFGDNERAQLGHDTLRSCLEP 470
>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|223950263|gb|ACN29215.1| unknown [Zea mays]
gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 483
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 165/489 (33%), Positives = 240/489 (49%), Gaps = 43/489 (8%)
Query: 41 GESTPGEFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELA 99
GE P F + P ++ VLT+ L DLA+LEATC R ++E A
Sbjct: 3 GEKAPRAFSIEELPGHLIGEVLTSGGLAAADLARLEATCRALR-----------PLAEYA 51
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGP 154
A +C RA F M A R +L ++CGGSWK VLRFL + G + Q G
Sbjct: 52 ASKLCAARAAFAAMGPAARGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGSMQVATGR 111
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLIS 213
H++ V V YS GS+ G LGHG + S + R+I +A ++
Sbjct: 112 YHTLLVHDSSV-YSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVT 170
Query: 214 DAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++G+V+ G +S G E G + + P VE+LK I Q A G FT +L+R+G
Sbjct: 171 ESGEVFTCGDNSSLCCGHGEVG----RTIFRPMQVEALKGIPCKQVATGLSFTVILTRDG 226
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGYCYLLALACQPSGMAVY 329
+VYT +LGH + P L+ E VVQIAAG Y A+ + V+
Sbjct: 227 QVYTCGSNTHGQLGHGDTIDRATP-KLIELFEGPTQVVQIAAGASYTFAVTDDGT---VH 282
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G LGHG + DE PR I+ F+ N+ V V+AG HA + G V TWG G
Sbjct: 283 SFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGY 342
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LGHG+E ++ P+++ +L A+ V TFV++++G V +FG SLG
Sbjct: 343 CGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGF-- 400
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+ G ++ V+ P+++ SL+ + V QIS +Y HT A+T G ++ FG ++
Sbjct: 401 LDRGTSDK---VMRPRVLESLQ--DHYVSQIS--TGLY---HTVAVTNKGIVFGFGDNER 450
Query: 510 GQLGIELVN 518
QLG E +
Sbjct: 451 AQLGQEYIR 459
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G H++AVT+KG+V+ FG N QLG +P I + I I AA +G
Sbjct: 424 SQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIEDIPIAAPSG 483
>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 236/489 (48%), Gaps = 38/489 (7%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L VLT+ L DL LE T F F P S+++ AA +C ++ M
Sbjct: 17 LILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYAASQLCSMHPVYVGMGL 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSIAVTSKGVVYSFGS 171
+++L C G+WK + FL + E E SQ IA + + + VYS G
Sbjct: 77 TTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNSKVYSCGV 136
Query: 172 NSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 230
+ SG L HG+ T + PI ++ Q +A + + +GQV G +S
Sbjct: 137 SLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCG 196
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
+ + ++ + P+LVE+LK Q A G FT LSREG YT +LGH
Sbjct: 197 H-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGH----G 251
Query: 291 DVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
D P+ +E + PVVQIAAG Y+LA+ S VYS G G LGHG + D
Sbjct: 252 DTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGS---VYSFGSGSNFCLGHGEQQD 308
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
E PR+I+ F+ + + V+AG HA + +GRV TWG G G LGHG+E + P+V
Sbjct: 309 ELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQV 368
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHANVLTP 464
+ LN+ A+ V TFV+ E G +Y FG SLG ++D VL P
Sbjct: 369 LVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD-------KVLRP 421
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
+++ LK RV Q+S +Y HT +T+ G+++ FG ++ QLG + + RG
Sbjct: 422 RVLECLKP--HRVSQVS--TGLY---HTIVVTQRGRIFGFGDNERAQLG-----HDSLRG 469
Query: 525 NPERVDIDL 533
E +I L
Sbjct: 470 CLEPTEIFL 478
>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
Length = 484
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 240/491 (48%), Gaps = 47/491 (9%)
Query: 41 GESTPGEFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELA 99
GE P F + P ++ VLT+ L DLA+LEATC R ++E A
Sbjct: 4 GEKAPRAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRALR-----------PLAEHA 52
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGP 154
A + RA F M A R +L ++CGGSWK VLRFL + G N Q G
Sbjct: 53 ASRLWAARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGR 112
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPR-PIRSLQGIRIIQAAAGAGRTML 211
H++ V V YS GS+ G LGHG TT+ R P SL R++ +A
Sbjct: 113 YHTLLVHDSSV-YSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS--RVVNISASHNHAAF 169
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+++ G+V+ G +S G E G + + P +++LK I Q A G FT +L+
Sbjct: 170 VTELGEVFTCGDNSSLCCGHGEVG----RTIFRPTEIKALKGISCKQVATGLSFTVILTT 225
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMA 327
+G+VYT +LGH + P ++ E + PVVQ+AAG Y A+ +
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRATP-KIVELFEGLAPVVQVAAGASYTFAVTDDGT--- 281
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G LGHG + DE PR I+ F+ N+ V V+AG HA + G V TWG
Sbjct: 282 VYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGR 341
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G G LGHG+E ++ P+++ +L A+ V TFV++++G V++FG SLG
Sbjct: 342 GYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGF 401
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
V+ P+++ SL+ + V QIS +Y HT A+T G ++ FG
Sbjct: 402 PDRGSSD-----KVMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVTNRGIVFGFGDN 449
Query: 508 DKGQLGIELVN 518
++ QLG E +
Sbjct: 450 ERAQLGQEYIR 460
>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 488
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 236/486 (48%), Gaps = 32/486 (6%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L VLT+ L DL LE T F F P S+++ AA +C ++ M
Sbjct: 17 LILEVLTSGKLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYAASQLCSMHPVYVGMGL 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IAGPGHSIAVTSKGVVYSFGS 171
+++L C G+WK +L FL + E E SQ IA + + + VYS G
Sbjct: 77 TTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNSKVYSCGV 136
Query: 172 NSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 230
+ SG L HG T + PI ++ Q +A + + +G+V G +S
Sbjct: 137 SLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCG 196
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
+ + ++ + P+LVE LK Q A G FT LSREG YT +LGH +
Sbjct: 197 H-LDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMD 255
Query: 291 DVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
P ++ L+NI PVVQIAAG Y+LA+ S VYS G G LGHG + DE
Sbjct: 256 RPAP-KVVEFLKNIGPVVQIAAGPSYVLAVTQDGS---VYSFGSGSNFCLGHGEQQDELQ 311
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
PR+I+ F+ + + V+AG HA + +GRV TWG G G LGHG+E + P+V+
Sbjct: 312 PRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVN 371
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHANVLTPQLV 467
L + A+ V TFV+ E G +Y FG SLG ++D VL P+++
Sbjct: 372 LKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD-------KVLRPRVL 424
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
LK RV Q+S +Y HT +T+ G+++ FG ++ QLG + + RG E
Sbjct: 425 ECLKP--HRVSQVS--TGLY---HTIVVTQGGRIFGFGDNERAQLG-----HNSLRGCLE 472
Query: 528 RVDIDL 533
+I L
Sbjct: 473 PTEIFL 478
>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 225/468 (48%), Gaps = 31/468 (6%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++ +LT L DLA LE T F P S+ + AA +C ++ M
Sbjct: 17 LIFEILTTGRLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFAAYQLCVSHRVYSGMGW 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLA-----GEACCRRENSQAIAGPGHSIAVTSKGVVYSFG 170
++ L +C G+WK VLRFL A G N Q G H++ + V YS G
Sbjct: 77 NAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHTLLIRDSSV-YSCG 135
Query: 171 SNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
S+ G LGHG TT+ R IR +IQ +A + +G+V+ G +S
Sbjct: 136 SSLCGVLGHGAETTQCVAFTR-IRFPSLAYVIQVSASHNHAAFVLQSGEVFTCGDNSSFC 194
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
+ + + P+LVE+LK + Q A+G FT L+R+G++YT +LGH
Sbjct: 195 CGHN-DTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDT 253
Query: 289 PNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ P ++ LE + VVQIAAG Y+LA+ VYS G G LGHG + DE
Sbjct: 254 QDRPTP-KIIELLEGVGSVVQIAAGPSYVLAVT---DNGVVYSFGSGSNLCLGHGEQHDE 309
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
PR I+ F+ ++ V V+AG HA + G V +WG G G LGHG+E +++P +V
Sbjct: 310 FRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALV 369
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHANVLTPQ 465
L A+ V TFV+ + G VY FG SLG ++D V+ P+
Sbjct: 370 NCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSD-------KVMRPR 422
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ SL+ V QIS +Y HT +T G+++ FG ++ QLG
Sbjct: 423 VLDSLRA--RHVSQIS--TGLY---HTVVVTNQGQMFGFGDNERAQLG 463
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 144 RRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
RR++ + AG H++A+ S G VYS+G G LGHG ++ P + L+ +
Sbjct: 319 RRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAV 378
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIG 259
Q A +T ++ D G VY FG FG + +G + V P++++SL+ V Q + G
Sbjct: 379 QVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTG 438
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 294
+ T V++ +G+++ F A+LGH T ++P
Sbjct: 439 LYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQP 473
>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 489
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 220/476 (46%), Gaps = 24/476 (5%)
Query: 54 PSIVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPM 113
P I+ +L L P DLA LEA+ FR + AP SI+ELAA CQ +F+
Sbjct: 10 PCILQDILYNGRLGPVDLASLEASSYMFRAASGIAPYRFKSIAELAAHHSCQMHPVFENF 69
Query: 114 TEAERQDLKQKCGGSWKLVLRFL------LAGEACCRRENSQAIAGPGHSIAVTSKGVVY 167
R +L +C G+WKLVL FL + AG H++ V KG +Y
Sbjct: 70 PPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHTLLVDRKGELY 129
Query: 168 SFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+ G+ S + RP I RI+Q +A ++++GQVY FG +
Sbjct: 130 ACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESGQVYTFGDNVS 189
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G G + ++ P LV +L+ Q + G +T L+R G ++++ + +LG
Sbjct: 190 CCCGVGESG-QPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWGCNSHGQLGQG 248
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
P + E+ PV Q++AG C+ LA+ SG ++S G G LGH
Sbjct: 249 NTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVT--KSGQ-LFSWGYGSNYCLGHDDFLT 305
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
E P+ +E +L + AAG H+A + G V TWG G G LGHG + P V
Sbjct: 306 ELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTPLV 365
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQ 465
V AL +A+ V TFV+ ++G V+SFG SLG QG ++ V++PQ
Sbjct: 366 VAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLGV------QGKSASDTVVSPQ 419
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
+ L +V I+ +Y HT +T G ++ FG D QLG V N+T
Sbjct: 420 SL-DLALHGHKVSTIAA--GMY---HTLVITRKGAIFGFGDNDSSQLGPVSVTNET 469
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 157/341 (46%), Gaps = 28/341 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKD-SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
R + AAG T+L+ G++YA G S V + S L + I + A
Sbjct: 108 RDVLVAAGRYHTLLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISA 167
Query: 257 AIGNF-FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
NF A ++ G+VYTF G + L+ TLE P Q++ G Y
Sbjct: 168 ---NFNHAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGY 224
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
+AL ++S GC G+LG G+ ++ PR IE+F N PV V+AG H
Sbjct: 225 TVALT---RNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESN--PVAQVSAGICHTL 279
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDG 432
V + G++ +WG+G CLGH + E PK V+ +D+ I A GD + + G
Sbjct: 280 AVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLG 339
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
VY++G G +LGH A D + TP +V +LK + R VQ+ + T
Sbjct: 340 YVYTWGKGYCGALGHGAGTDQR--------TPLVVAALK--STRAVQV-----VARRRKT 384
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
F L ++G +++FG LG++ + +P+ +D+ L
Sbjct: 385 FVLGDNGTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDLAL 425
>gi|361069249|gb|AEW08936.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|376339101|gb|AFB34079.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339103|gb|AFB34080.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339105|gb|AFB34081.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339107|gb|AFB34082.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339109|gb|AFB34083.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339111|gb|AFB34084.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339113|gb|AFB34085.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
gi|376339115|gb|AFB34086.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
Length = 96
Score = 186 bits (471), Expect = 4e-44, Method: Composition-based stats.
Identities = 80/96 (83%), Positives = 92/96 (95%)
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
TDEK+PR+IEQF+LL L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1 TDEKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
KVV++L VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61 KVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 47.4 bits (111), Expect = 0.020, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H+ V G V ++G G LGHG E E P+ + SL ++ + G T +
Sbjct: 24 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPKVVESLLAVKAVHVTTGDYTTFV 83
Query: 212 ISDAGQVYAFG 222
+++ G VY+FG
Sbjct: 84 VAENGDVYSFG 94
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 182 TEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
T+E++ PR I + +++ + AAGA ++ G+V +G +G +G + +
Sbjct: 1 TDEKY-PRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE-- 57
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
T P++VESL + V G++ T V++ G VY+F G
Sbjct: 58 TVPKVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 40.4 bits (93), Expect = 2.1, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 401 ESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
E P++++ +K + +A G + VV +DG V ++G G LGH GN
Sbjct: 3 EKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGH-------GNEE 55
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ P++V SL V + +T Y TF + E+G +Y+FG G
Sbjct: 56 CETV-PKVVESLLAVK----AVHVTTGDY---TTFVVAENGDVYSFGCG 96
Score = 40.0 bits (92), Expect = 3.1, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 242 PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P+++E K + + V A G + AV+ ++GRV T+ WG LGH E + P ++
Sbjct: 6 PRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPK-VVE 64
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+L + V + G +A VYS GCG
Sbjct: 65 SLLAVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96
>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
Length = 511
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 231/486 (47%), Gaps = 36/486 (7%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L +L++ L DL LE T F P S+ + AA +C I+ ++
Sbjct: 17 LILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFAAFQLCGSHPIYAALSL 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHSIAVTSKGVVYSFG 170
++DL +CG +WK VLRFL + E N Q G H++ + V YS G
Sbjct: 77 NAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHTLLIKDSSV-YSCG 135
Query: 171 SNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
S+ G LGHG TT+ R I + Q +A + +G+V+ G +S
Sbjct: 136 SSLCGVLGHGPETTQCVAFSR-INFPPLAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFC 194
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
+G + + P+LVE+LK + Q A G FT L+ +G VYT +LGH
Sbjct: 195 CGHG-DTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDT 253
Query: 289 PNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ P ++ LE + PVVQIAAG Y A+A G V+S G G LGHG + +E
Sbjct: 254 VDRRTP-KIVELLEGVGPVVQIAAGPSY--AMAVTDDG-TVHSFGSGSNFCLGHGEQHNE 309
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
PR I+ F+ + V ++AG H + G V TWG G G LGHG+E ++ P+++
Sbjct: 310 LRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEIL 369
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN--VLTPQ 465
+L A+ V TFV+ + G VY FG SLG +R A+ V+ P
Sbjct: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP-------DRGASDKVMRPW 422
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 525
++ SL+ + QIS +Y HT A+ G+++ FG ++ QLG + T RG
Sbjct: 423 ILDSLR--GHYISQIS--TGLY---HTVAVXNKGQIFGFGDNERAQLG-----HDTLRGC 470
Query: 526 PERVDI 531
P +I
Sbjct: 471 PVPTEI 476
>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
vinifera]
gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 231/486 (47%), Gaps = 36/486 (7%)
Query: 56 IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTE 115
++L +L++ L DL LE T F P S+ + AA +C I+ ++
Sbjct: 17 LILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFAAFQLCGSHPIYAALSL 76
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCRRE-----NSQAIAGPGHSIAVTSKGVVYSFG 170
++DL +CG +WK VLRFL + E N Q G H++ + V YS G
Sbjct: 77 NAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHTLLIKDSSV-YSCG 135
Query: 171 SNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
S+ G LGHG TT+ R I + Q +A + +G+V+ G +S
Sbjct: 136 SSLCGVLGHGPETTQCVAFSR-INFPPLAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFC 194
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
+G + + P+LVE+LK + Q A G FT L+ +G VYT +LGH
Sbjct: 195 CGHG-DTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDT 253
Query: 289 PNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ P ++ LE + PVVQIAAG Y A+A G V+S G G LGHG + +E
Sbjct: 254 VDRRTP-KIVELLEGVGPVVQIAAGPSY--AMAVTDDG-TVHSFGSGSNFCLGHGEQHNE 309
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
PR I+ F+ + V ++AG H + G V TWG G G LGHG+E ++ P+++
Sbjct: 310 LRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEIL 369
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN--VLTPQ 465
+L A+ V TFV+ + G VY FG SLG +R A+ V+ P
Sbjct: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP-------DRGASDKVMRPW 422
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 525
++ SL+ + QIS +Y HT A+ G+++ FG ++ QLG + T RG
Sbjct: 423 ILDSLR--GHYISQIS--TGLY---HTVAVNNKGQIFGFGDNERAQLG-----HDTLRGC 470
Query: 526 PERVDI 531
P +I
Sbjct: 471 PVPTEI 476
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 201/367 (54%), Gaps = 27/367 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VYS+G GQLG G T ++ RP PI +L RI+Q A G+G T++++D G+VY +G+
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G +G G K V P+LVE L+ + Q G++ TA ++ G +YT+ G +LGH
Sbjct: 63 DGRLGHGDNGWKFV--PRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E P L+ TL+ + V Q+A G + + L VY+ G G GHG
Sbjct: 121 GNETGHSTPF-LVETLKGMQVRQVACGSRHTVVLLENKD---VYTWGDKENGVSGHGDTE 176
Query: 346 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P +E+ + N+ V ++A +H A + + G V T+G G++G LGH +E + V
Sbjct: 177 GHQYLPCPVEELRGKNI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+ V+AL + VA G + T V+E G+VY++G GE LGH G++ N P
Sbjct: 235 RFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH-------GDK-VNKTVP 286
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
V SL V + VVQI+ W +HT ALT++G++Y +G GD G+LG N+ T+
Sbjct: 287 TRVESL--VEKLVVQITCG----W-SHTVALTDTGEVYTWGNGDHGKLGH---NDTTKVT 336
Query: 525 NPERVDI 531
P+ VD+
Sbjct: 337 LPKLVDV 343
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 181/359 (50%), Gaps = 24/359 (6%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
+A R Q G GH++ +T +G VY++G G+LGHG ++ PR + L+G I
Sbjct: 29 DALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNI 88
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
Q G+ T ++ +G +Y +G +G+ +G + ++P LVE+LK + V Q A G
Sbjct: 89 RQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH--STPFLVETLKGMQVRQVACG 146
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ T VL VYT+ + GH TE + P P+ L +VQI+A C
Sbjct: 147 SRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV-EELRGKNIVQISA--CGFHT 203
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
A G V++ G G G+LGH S ++ R +E ++ V A G +H A V +
Sbjct: 204 AALSEFG-EVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQV--ACGGFHTAAVTE 260
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V TWG G +G LGHG++ ++VP V++L + + + G T +++ G+VY++G
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G+ LGHN V P+LV L+ +RV+ ++ +N HT AL +
Sbjct: 321 NGDHGKLGHNDT--------TKVTLPKLVDVLE--GKRVISVA-----SYNEHTVALVD 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M VYS G G G+LG G +D+ P I+ L + V +A G+ H V+ +G V TW
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTDEGEVYTW 58
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G G LGHG+ + VP++V+ L V G Y T V+ GD+Y++G G L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH G H+ TP LV +LK + R V + HT L E+ +Y +G
Sbjct: 119 GH-----GNETGHS---TPFLVETLKGMQVRQVACG-------SRHTVVLLENKDVYTWG 163
Query: 506 AGDKGQLG 513
+ G G
Sbjct: 164 DKENGVSG 171
>gi|361069251|gb|AEW08937.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|376339117|gb|AFB34087.1| hypothetical protein CL2350Contig1_01, partial [Pinus mugo]
gi|383168843|gb|AFG67538.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168845|gb|AFG67539.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168847|gb|AFG67540.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168849|gb|AFG67541.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168851|gb|AFG67542.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168853|gb|AFG67543.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168855|gb|AFG67544.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168857|gb|AFG67545.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168859|gb|AFG67546.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168861|gb|AFG67547.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168863|gb|AFG67548.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168865|gb|AFG67549.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168867|gb|AFG67550.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168869|gb|AFG67551.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168871|gb|AFG67552.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168873|gb|AFG67553.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
gi|383168875|gb|AFG67554.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
Length = 96
Score = 181 bits (459), Expect = 9e-43, Method: Composition-based stats.
Identities = 79/96 (82%), Positives = 90/96 (93%)
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
TDEK+PR IEQF+ L L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1 TDEKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
KVV++L VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61 KVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 46.2 bits (108), Expect = 0.039, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H+ V G V ++G G LGHG E E P+ + SL ++ + G T +
Sbjct: 24 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPKVVESLLRVKAVHVTTGDYTTFV 83
Query: 212 ISDAGQVYAFG 222
+++ G VY+FG
Sbjct: 84 VAENGDVYSFG 94
Score = 43.1 bits (100), Expect = 0.37, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 182 TEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
T+E++ PR I + +++ + AAGA ++ G+V +G +G +G + +
Sbjct: 1 TDEKY-PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE-- 57
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
T P++VESL + V G++ T V++ G VY+F G
Sbjct: 58 TVPKVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96
Score = 42.0 bits (97), Expect = 0.71, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 401 ESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
E P+ ++ +K + +A G + VV +DG V ++G G LGH GN
Sbjct: 3 EKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGH-------GNEE 55
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ P++V SL RV + +T Y TF + E+G +Y+FG G
Sbjct: 56 CETV-PKVVESLL----RVKAVHVTTGDY---TTFVVAENGDVYSFGCG 96
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 242 PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P+ +E K++ + V A G + AV+ ++GRV T+ WG LGH E + P ++
Sbjct: 6 PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVPK-VVE 64
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+L + V + G +A VYS GCG
Sbjct: 65 SLLRVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 198/367 (53%), Gaps = 27/367 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VYS+G GQLG G T ++ RP PI +L RI+Q A G+G T+++++ G+VY +G+
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G +G G K V P+LVE L+ + Q G++ TA ++ G +YT+ G +LGH
Sbjct: 63 DGRLGHGDNGWKFV--PRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E P+ L+ TL+++ V Q+A G + + L VY+ G G GHG
Sbjct: 121 GNETGHSTPY-LVETLKSMQVRQVACGSRHTVVLLENKD---VYTWGDKENGVSGHGD-- 174
Query: 346 DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
E H L + L + +V ++A +H A + + G V T+G G++G LGH +E + V
Sbjct: 175 TEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+ V AL + VA G + T V+E G+VY++G GE LGH G++ N P
Sbjct: 235 RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH-------GDK-VNKTVP 286
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
V SL + + V+QI+ W +HT LT++G++Y +G GD G+LG N+ +
Sbjct: 287 TRVESL--LEKLVLQITCG----W-SHTVTLTDTGEVYTWGNGDHGKLGH---NDTAKVT 336
Query: 525 NPERVDI 531
P+ VD+
Sbjct: 337 LPKPVDV 343
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 175/342 (51%), Gaps = 9/342 (2%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
+A R Q G GH++ +T +G VY++G G+LGHG ++ PR + L+G I
Sbjct: 29 DALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNI 88
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
Q G+ T ++ +G +Y +G +G+ +G + ++P LVE+LK++ V Q A G
Sbjct: 89 RQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGH--STPYLVETLKSMQVRQVACG 146
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ T VL VYT+ + GH TE + P P+ L +VQI+A C
Sbjct: 147 SRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV-EELRGKSIVQISA--CGFHT 203
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
A G V++ G G G+LGH S ++ R ++ ++ V A G +H A V +
Sbjct: 204 AALSEFG-EVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQV--ACGGFHTAAVTE 260
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V TWG G +G LGHG++ ++VP V++L + + + G T +++ G+VY++G
Sbjct: 261 TGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWG 320
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G+ LGHN A + +VL + V S+ NE V +
Sbjct: 321 NGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVAL 362
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M VYS G G G+LG G +D+ P I+ L + V +A G+ H V+ ++G V TW
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTEEGEVYTW 58
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G G LGHG+ + VP++V+ L V G Y T V+ GD+Y++G G L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH G H+ TP LV +LK + R V + HT L E+ +Y +G
Sbjct: 119 GH-----GNETGHS---TPYLVETLKSMQVRQVACG-------SRHTVVLLENKDVYTWG 163
Query: 506 AGDKGQLG 513
+ G G
Sbjct: 164 DKENGVSG 171
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T G VY++G+ G+LGH T + P+P+ L G R+I A+
Sbjct: 299 QITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEH 358
Query: 209 TMLISD 214
T+ + D
Sbjct: 359 TVALVD 364
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 192/366 (52%), Gaps = 42/366 (11%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+SFG G+LGHG T + P+ I L I+ I AAG ++ ++ +G VY+FG
Sbjct: 49 VFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQAI--AAGTNHSLALTKSGDVYSFGFGL 106
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
FG +G ++L P+ +E L +I + A G+F + L++ G VY+F G + LGH
Sbjct: 107 FGRLGHGNTDSQL--EPKKIEGLSDIQAIAA--GDFHSLALTKSGDVYSFGNGT-SGLGH 161
Query: 286 HTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ P +E++ VQ IAAG + LAL VYS G GL G+LGHG
Sbjct: 162 GNTEDQSTPK----KIESLSDVQAIAAGGNHSLALTKSGD---VYSFGFGLFGRLGHGDT 214
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
+ P+ IE L ++Q +AAG H+ + + G V ++GWG +G LGHG+ E + P
Sbjct: 215 DSQLEPKKIE--DLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTP 270
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
K ++ L+D++A VA G + +++ G+VYSFG G + LGH D LTP
Sbjct: 271 KKIEDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDD--------QLTP 320
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
+ + LK + + H+ ALT+SG +Y+FG G G LG NQ E
Sbjct: 321 KKIEGLKDIQAIAA---------GDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLE-- 368
Query: 525 NPERVD 530
P++++
Sbjct: 369 -PKKIE 373
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 183/327 (55%), Gaps = 31/327 (9%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
QAIA G HS+A+T G VYSFG G+LGHG T+ + P+ I L I+ I AAG
Sbjct: 81 QAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDF 138
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ ++ +G VY+FG G + G T+ ++P+ +ESL ++ + AA GN A L+
Sbjct: 139 HSLALTKSGDVYSFGN---GTSGLGHGNTEDQSTPKKIESLSDVQAI-AAGGNHSLA-LT 193
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGM 326
+ G VY+F +G RLGH + +EP +E++ +Q IAAG + LAL
Sbjct: 194 KSGDVYSFGFGLFGRLGHGDTDSQLEPK----KIEDLSDIQAIAAGGNHSLALTKSGD-- 247
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VYS G GL G+LGHG ++ P+ IE L ++Q VAAGA H+ + + G V ++G
Sbjct: 248 -VYSFGWGLHGQLGHGDTENQLTPKKIE--DLSDIQ--AVAAGANHSLALTKSGEVYSFG 302
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LGHG+ + + PK ++ L D++AI A GD+ + +++ GDVYSFG G S LG
Sbjct: 303 RGNTGQLGHGDTDDQLTPKKIEGLKDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-LG 359
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQV 473
H AN L P+ + L +
Sbjct: 360 H--------GDTANQLEPKKIEGLTDI 378
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 117/209 (55%), Gaps = 28/209 (13%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++V+S G G+ GKLGHG ++ P+ IE L ++Q +AAG H+ + + G V ++
Sbjct: 47 VSVFSFGMGMYGKLGHGDTANQLAPKKIE--GLSDIQ--AIAAGTNHSLALTKSGDVYSF 102
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G+G +G LGHGN + + PK ++ L+D++AI A GD+ + +++ GDVYSFG G S L
Sbjct: 103 GFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-L 159
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH D TP+ + SL V H+ ALT+SG +Y+FG
Sbjct: 160 GHGNTEDQS--------TPKKIESLSDVQAIAA---------GGNHSLALTKSGDVYSFG 202
Query: 506 AGDKGQLGIELVNNQTERGNPERVDIDLS 534
G G+LG ++Q E P++++ DLS
Sbjct: 203 FGLFGRLGHGDTDSQLE---PKKIE-DLS 227
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 11/175 (6%)
Query: 149 QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
QAIA G HS+A+T G VYSFG GQLGHG TE + P+ I L I+ + AAGA
Sbjct: 230 QAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQAV--AAGAN 287
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ ++ +G+VY+FG+ + G+ +G +L +P+ +E LK+I + A G+F + L+
Sbjct: 288 HSLALTKSGEVYSFGRGNTGQLGHGDTDDQL--TPKKIEGLKDIQAIAA--GDFHSLALT 343
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ G VY+F G + LGH N +EP + G + + IAAG + LALA +
Sbjct: 344 KSGDVYSFGNGT-SGLGHGDTANQLEPKKIEGLTD---IQAIAAGANHSLALAVE 394
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 196/358 (54%), Gaps = 24/358 (6%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY++G GQLG G T +++ P + +LQ + +Q + G+G T++++D G+VY +G+
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGD 62
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G +G G K V P+LVE L++ V Q G++ TA ++ G +YT+ G +LGH
Sbjct: 63 DGRLGHGDNGWKFV--PRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGH 120
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E P L+ +++ + V Q+A G + + L VY+ G G GHG +
Sbjct: 121 GNENGHSTP-SLVESIKGLYVRQVACGSRHTVVLL---ENQDVYTWGDKENGVSGHGDTS 176
Query: 346 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + + +N++ ++A +H A + ++G+V T+G G++G LGH +E + V
Sbjct: 177 GHQYSPYCVSELVEINIKQ--ISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVA 234
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
K + AL + VA G + T V+E G V+++G GE LGH G++ N + P
Sbjct: 235 KCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGH-------GDK-VNQIIP 286
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
V SL +++ ++Q++ W +HT ALT+ G+++ +G GD G+LG N TE
Sbjct: 287 TRVESL--IDKNIIQLTCG----W-SHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTE 337
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 182/357 (50%), Gaps = 24/357 (6%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA R+ Q G GH++ +T G VY++G G+LGHG ++ PR + L+ ++
Sbjct: 29 EALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKV 88
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
Q G+ T ++ +G++Y +G +G+ +G + ++P LVES+K ++V Q A G
Sbjct: 89 RQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGH--STPSLVESIKGLYVRQVACG 146
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ T VL VYT+ + GH T + P+ + L I + QI+A C
Sbjct: 147 SRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPY-CVSELVEINIKQISA--CGFHT 203
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
A +G V++ G G G+LGH S ++ + I+ L+ + VA G +H A V +
Sbjct: 204 AALSENGQ-VFTFGEGKFGRLGHNSERNQPVAKCIDA--LIGKRIKQVACGGFHTAAVTE 260
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V TWG G +G LGHG++ + +P V++L D I + G T +++ G+V+++G
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
G+ LGHN V P+L+ + ++RV+ ++ +N HT AL
Sbjct: 321 NGDHGKLGHNDT--------NKVTEPKLIETFN--SKRVISVA-----SYNEHTVAL 362
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 131/261 (50%), Gaps = 25/261 (9%)
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
VYT+ G D +LG + P L+ L++ VQI+ G + + L VY+
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHP-ILVEALQDRQTVQISCGSGHTVVLT---DDGKVYTW 58
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G G+LGHG + PRL+E + ++ V G++H A V G + TWG G YG
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQV--TCGSYHTAAVTVSGELYTWGGGMYG 116
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHGNE S P +V+++ + VA G T V+ E+ DVY++G E+ GH
Sbjct: 117 KLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGH---- 172
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
G+ + +P V+ L ++N + QIS HT AL+E+G+++ FG G G+
Sbjct: 173 ---GDTSGHQYSPYCVSELVEIN--IKQISAC-----GFHTAALSENGQVFTFGEGKFGR 222
Query: 512 LGIELVNNQTERGNPERVDID 532
LG + +ER P ID
Sbjct: 223 LG-----HNSERNQPVAKCID 238
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M VY+ G G G+LG G +D+ HP L+E Q + Q V ++ G+ H V+ DG+V TW
Sbjct: 1 MTVYTWGRGEDGQLGLGDTSDQYHPILVEALQ--DRQTVQISCGSGHTVVLTDDGKVYTW 58
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G G LGHG+ + VP++V+ L D K V G Y T V+ G++Y++G G L
Sbjct: 59 GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKL 118
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH G N H+ TP LV S+K + R V + HT L E+ +Y +G
Sbjct: 119 GH-----GNENGHS---TPSLVESIKGLYVRQVACG-------SRHTVVLLENQDVYTWG 163
Query: 506 AGDKGQLG 513
+ G G
Sbjct: 164 DKENGVSG 171
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 174/319 (54%), Gaps = 21/319 (6%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSS-----GQLGHGTTEEEWRPRPIRSL 194
EA R AG HS+ T G + SFG S+ G+LGHG + PRP+ SL
Sbjct: 104 EALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL 163
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
G+RI++ AAGA ++++SD G V++FG G +G Q +LV P+L+ SL+ VV
Sbjct: 164 SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV--PKLISSLQREKVV 221
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
A G+ + V++ G VY+F G++ LGH + P + ++ P V++AAG
Sbjct: 222 DIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR-PAVKVAAGGS 280
Query: 315 YLLALA----CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ--PVVVAA 368
+ L L+ + G V S G G+LG G + R+I + ++ V + A
Sbjct: 281 HSLVLSKLYVLEQEGR-VLSFGQNSYGQLGLGHFS-----RMIASPAQVQVEAAAVEIEA 334
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFV 427
GA H+ V+ DGRV ++G ++G LGHGN+ ++ P ++Q+L + + VA G+ + V
Sbjct: 335 GAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLV 394
Query: 428 VSEDGDVYSFGCGESASLG 446
+S +G V+SFGCG++ LG
Sbjct: 395 LSAEGTVFSFGCGKNGRLG 413
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 184/371 (49%), Gaps = 38/371 (10%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G V SFG GHG ++ RP+ + +L R+ +AG +++ + G + +FG
Sbjct: 78 GNVVSFGLADPS--GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGY 135
Query: 224 DSF-----GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
S G +G Q T+++ P L SL + +V+ A G + VLS +G V++F G
Sbjct: 136 GSANVVVDGRLGHGDQRTQMIPRPVL--SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVG 193
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
D LGH + + P L+ +L+ VV IAAG + L +A SG VYS G G G
Sbjct: 194 IDGSLGHGDQARQLVP-KLISSLQREKVVDIAAGSAHSLVVA--ESG-DVYSFGLGSEGA 249
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG------QDGRVCTWGWGRYGC 392
LGHG P+ IE F + V VAAG H+ V+ Q+GRV ++G YG
Sbjct: 250 LGHGDTDMSLVPKKIEHF--VQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQ 307
Query: 393 LGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + P VQ + A+ + G + + V++ DG VYSFG + LGH
Sbjct: 308 LGLGHFSRMIASPAQVQV--EAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGH---- 361
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
GN + P L+ SL++ ER+V ++ N+ + L+ G +++FG G G+
Sbjct: 362 ---GNDLRDNPEPTLIQSLER--ERIVDVAAGNNF-----SLVLSAEGTVFSFGCGKNGR 411
Query: 512 LGIELVNNQTE 522
LG +N T+
Sbjct: 412 LGKGDESNATQ 422
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 134/272 (49%), Gaps = 30/272 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ ++ +G V+SFG G LGHG + P+ I SLQ +++ AAG+ +++
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLV 232
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR--- 268
++++G VY+FG S G +G LV P+ +E V+ A G + VLS+
Sbjct: 233 VAESGDVYSFGLGSEGALGHGDTDMSLV--PKKIEHFVQRPAVKVAAGGSHSLVLSKLYV 290
Query: 269 ---EGRVYTF---SWGNDARLGHHTE----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
EGRV +F S+G LGH + P V+ V+I AG + L
Sbjct: 291 LEQEGRVLSFGQNSYGQLG-LGHFSRMIASPAQVQVEA--------AAVEIEAGAHHSLV 341
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L VYS G G+LGHG+ D P LI+ + + V VAAG + V+
Sbjct: 342 LTNDGR---VYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERI--VDVAAGNNFSLVLS 396
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+G V ++G G+ G LG G+E + P VV A
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVVFA 428
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 183/353 (51%), Gaps = 30/353 (8%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
++YS+G GQ G+G+T ++ P P+ L+ + ++Q A G+G T+++++ V+++G+
Sbjct: 7 MLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
G + K V P LV +L + Q G++ TA +S G ++T+ G +LG
Sbjct: 67 DDGRLGHADNHWKYV--PHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124
Query: 285 HHTEPNDVEPHPLLGTLENI---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
H E HP +E V QIA G + AL +G VY G G G
Sbjct: 125 HGNEVG----HPAPCRVEAFIGREVEQIACGSRHTAALL---AGGEVYCWGDRENGVCGI 177
Query: 342 GSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G + ++ P+ +E + + + +AA +H A + QDG + +WG G++G LG GNE+
Sbjct: 178 GEAAEHQYLPKKLEALKGVKITQ--IAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKN 235
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ P V+ L V+ VA G + + V+EDGDV +FG GE LGH G++ N
Sbjct: 236 QVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGH-------GDK-TN 287
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P LV +L+ +VQ++ S HT L+E GK++ FG GD G+LG
Sbjct: 288 RTVPCLVKALEGAG--IVQVTCGWS-----HTVTLSEDGKVFTFGNGDHGKLG 333
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 34/377 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G GH++ +T V+S+G G+LGH ++ P + +L G I Q G+
Sbjct: 43 QIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYH 102
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T ISD G ++ +G +G+ +G + +P VE+ V Q A G+ TA L
Sbjct: 103 TAAISDTGALWTWGGGMYGKLGHGNEVGH--PAPCRVEAFIGREVEQIACGSRHTAALLA 160
Query: 269 EGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G VY + + G H P +E L+ + + QIAA C A
Sbjct: 161 GGEVYCWGDRENGVCGIGEAAEHQYLPKKLEA------LKGVKITQIAA--CGFHTAAIT 212
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
G A++S G G G+LG G+ ++ P +E Q + ++ V A G +H+A V +DG V
Sbjct: 213 QDG-ALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQV--ACGGFHSACVTEDGDV 269
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
T+G G +G LGHG++ +VP +V+AL + V G T +SEDG V++FG G+
Sbjct: 270 LTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH A +A P+LV SL N +V +++ +N HT AL + +
Sbjct: 330 GKLGHGA--------NAKSALPKLVESL--ANMKVAKVA-----SYNEHTVALCHAEQEQ 374
Query: 503 AFGAGDKGQLGIELVNN 519
A + D + L+NN
Sbjct: 375 AVMSFDFLKDLRRLINN 391
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 24/305 (7%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+Y++G+ G+ G + + P VE LK++ VVQ A G+ T VL+ + V+++
Sbjct: 8 LYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGR 65
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
G+D RLGH PH L+ L + Q+ G + A++ +G A+++ G G+ G
Sbjct: 66 GDDGRLGHADNHWKYVPH-LVSALTGKSIKQVTCGSYHTAAIS--DTG-ALWTWGGGMYG 121
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
KLGHG+ P +E F + + +A G+ H A + G V WG G G G
Sbjct: 122 KLGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGE 179
Query: 398 E-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E + +PK ++AL VK +A + T +++DG ++S+G G+ LG QGN
Sbjct: 180 AAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLG-------QGN 232
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
N +TP V L+ V RV Q++ H+ +TE G + FG G+ GQLG
Sbjct: 233 E-KNQVTPCCVEGLQGV--RVKQVACGGF-----HSACVTEDGDVLTFGGGEHGQLGHGD 284
Query: 517 VNNQT 521
N+T
Sbjct: 285 KTNRT 289
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
D + +WG G G G+G+ + +P V+ L + + +A G T V++ED DV+S+
Sbjct: 4 HDSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSW 63
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G+ LGH AD P LV++L + + Q++ + HT A+++
Sbjct: 64 GRGDDGRLGH---ADNHWK-----YVPHLVSAL--TGKSIKQVTCGSY-----HTAAISD 108
Query: 498 SGKLYAFGAGDKGQLG 513
+G L+ +G G G+LG
Sbjct: 109 TGALWTWGGGMYGKLG 124
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 177/349 (50%), Gaps = 24/349 (6%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+++G GQLG G T ++ P + +L+G+ + Q A G+G T++++ G+V+ +G+
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G +G G K V P++ +SL V+Q G++ TA ++ G +YT+ G +LGH
Sbjct: 62 DGRLGHGDNGWKYV--PRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGH 119
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E P + L V QIA G + A + A+Y+ G G GHG
Sbjct: 120 GDEAGHATPKRVE-ALVGATVAQIACGSRHT---AIVTASGALYTWGDKENGVAGHGETE 175
Query: 346 DEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ PRL+E + + +A +H A+V G + TWG G++G LGH +E P
Sbjct: 176 GHQYLPRLLESMAAKRVAQI--SACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP 233
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+V + K V+ G + T VVSEDG +Y+FG GE LGH N N +TP
Sbjct: 234 TIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGH--------NDRVNKMTP 285
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +L + V QI+ S H+ ALT G +Y +G GD G+LG
Sbjct: 286 TFVEALDGM--FVSQITCGWS-----HSVALTVKGLVYTWGNGDHGKLG 327
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 17/320 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G GH++ +T+ G V+++G G+LGHG ++ PR +SL G ++Q G+
Sbjct: 37 QIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYH 96
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T ++ G +Y +G +G+ +G + +P+ VE+L V Q A G+ TA+++
Sbjct: 97 TAAVTGNGDLYTWGGGMYGKLGHGDEAGH--ATPKRVEALVGATVAQIACGSRHTAIVTA 154
Query: 269 EGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ + GH TE + P LL ++ V QI+A C +G
Sbjct: 155 SGALYTWGDKENGVAGHGETEGHQYLPR-LLESMAAKRVAQISA--CGFHTAIVTDAG-E 210
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+++ G G G+LGH S + P +++ ++ +P V+ G +H AVV +DGR+ T+G
Sbjct: 211 LFTWGEGKFGRLGHMSERNCHSPTIVDY--MVGKKPRQVSCGGFHTAVVSEDGRLYTFGG 268
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G +G LGH + + P V+AL+ + + G + ++ G VY++G G+ LGH
Sbjct: 269 GEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGH 328
Query: 448 NAIADGQGNRHANVLTPQLV 467
G G + V PQ V
Sbjct: 329 -----GNGRK---VAVPQAV 340
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 16/283 (5%)
Query: 129 WKLVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 186
WK V R LAG+ Q G H+ AVT G +Y++G G+LGHG
Sbjct: 72 WKYVPRMTQSLAGQIVL-----QVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHA 126
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 245
P+ + +L G + Q A G+ T +++ +G +Y +G G A +G +G + + P+L+
Sbjct: 127 TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYL--PRLL 184
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
ES+ V Q + F TA+++ G ++T+ G RLGH +E N P ++ +
Sbjct: 185 ESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP-TIVDYMVGKK 243
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q++ C A +Y+ G G G+LGH R ++ P +E + + +
Sbjct: 244 PRQVS---CGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQIT 300
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
G H+ + G V TWG G +G LGHGN +VP+ V+
Sbjct: 301 --CGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 17/187 (9%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
AV++ G G G+LG G +D+ P ++ + + +Q +A G+ H V+ DG V TWG
Sbjct: 1 AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQ--IACGSGHTVVLTTDGEVFTWG 58
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LGHG+ + VP++ Q+L + V G Y T V+ +GD+Y++G G LG
Sbjct: 59 RGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H A HA TP+ V +L V V QI+ + HT +T SG LY +G
Sbjct: 119 HGDEAG-----HA---TPKRVEAL--VGATVAQIACGSR-----HTAIVTASGALYTWGD 163
Query: 507 GDKGQLG 513
+ G G
Sbjct: 164 KENGVAG 170
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 175/347 (50%), Gaps = 39/347 (11%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G+VYS+G GQLG G T ++ RP + +L+ ++Q A G+G T+++S+ G VY +G+
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
G +G G K V P++VE+L+ +VQA G++ TA ++ +G +YT+ G +L
Sbjct: 67 GDDGRLGHGDNGWKYV--PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKL 124
Query: 284 GHHTEPNDVEPHPLLGTL---ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
GH E P P + E V QIA G + + L VY+ G G +G
Sbjct: 125 GHGNESG--HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGK---VYTWGDKENGVVG 179
Query: 341 HGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
H + ++ PR++E Q + V AA +H A + G + TWG G++G LGHG E
Sbjct: 180 HTNADGHQYLPRMLESLQAKTVTQV--AACGFHTAALTAAGEIFTWGEGKFGRLGHGMER 237
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVV-----------SEDGDVYSFGCGESASLGHN 448
+ VP++V+AL + HVA G + + + E G VY+FG G+ LGH
Sbjct: 238 NQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHG 297
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
+ V P LV L V VV+++ +N HT AL
Sbjct: 298 DV--------RKVSVPTLVAGL--VKMHVVKVA-----SYNEHTAAL 329
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 20/285 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G GH++ ++ G VY++G G+LGHG ++ PR + +L+G RI+QA G+
Sbjct: 44 QVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYH 103
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVL 266
T ++D G++Y +G +G+ +G + +P +V+ L++ V Q A G+ T VL
Sbjct: 104 TAAVTDKGELYTWGGGMYGKLGHGNESGH--PTPCMVKHLRDEGARVTQIACGSRHTVVL 161
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G+VYT+ + +GH +L +L+ V Q+AA C A +G
Sbjct: 162 TDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAA--CGFHTAALTAAG- 218
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---------- 376
+++ G G G+LGHG ++ PR++E L+ + VA G +H+A +
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMVPRMVE--ALMGKRVGHVACGGFHSAAILDSGELYTWG 276
Query: 377 -GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
G+ G+V T+G G +G LGHG+ SVP +V L + + VA+
Sbjct: 277 GGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVAS 321
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 22/299 (7%)
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
AG VY++G+ G+ G+ T P LV++LK+ VVQ A G+ T VLS +G VYT
Sbjct: 6 AGLVYSWGRGEDGQ--LGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYT 63
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ G+D RLGH P ++ LE +VQ G + A+ + +Y+ G G
Sbjct: 64 WGRGDDGRLGHGDNGWKYVPR-IVEALEGQRIVQATCGSYHTAAVTDKGE---LYTWGGG 119
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
+ GKLGHG+ + P +++ + + +A G+ H V+ G+V TWG G +G
Sbjct: 120 MYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVG 179
Query: 395 HGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
H N + + +P+++++L VA + T ++ G+++++G G+ LGH
Sbjct: 180 HTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGM---- 235
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
N + P++V +L + +RV ++ H+ A+ +SG+LY +G G+ GQ+
Sbjct: 236 ----ERNQMVPRMVEAL--MGKRVGHVACGG-----FHSAAILDSGELYTWGGGEHGQV 283
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 132/254 (51%), Gaps = 24/254 (9%)
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY++ G D +LG + ND + L+ L++ VVQ+A G + + L+ AVY
Sbjct: 7 GLVYSWGRGEDGQLGL-GDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDG---AVY 62
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWG 388
+ G G G+LGHG + PR++E L Q +V A G++H A V G + TWG G
Sbjct: 63 TWGRGDDGRLGHGDNGWKYVPRIVEA---LEGQRIVQATCGSYHTAAVTDKGELYTWGGG 119
Query: 389 RYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LGHGNE P +V+ L D + +A G T V+++ G VY++G E+ +G
Sbjct: 120 MYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVG 179
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H N + P+++ SL+ + V Q++ HT ALT +G+++ +G
Sbjct: 180 HT-------NADGHQYLPRMLESLQA--KTVTQVAACG-----FHTAALTAAGEIFTWGE 225
Query: 507 GDKGQLGIELVNNQ 520
G G+LG + NQ
Sbjct: 226 GKFGRLGHGMERNQ 239
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 206
+Q G H++ +T G VY++G +G +GH + ++ PR + SLQ + Q AA
Sbjct: 149 TQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG 208
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T ++ AG+++ +G+ FG +G++ ++V P++VE+L V A G F +A +
Sbjct: 209 FHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV--PRMVEALMGKRVGHVACGGFHSAAI 266
Query: 267 -----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
G+VYTF G+ +LG H + V L+ L + VV++A+ +
Sbjct: 267 LDSGELYTWGGGEHGQVYTFGNGDHGKLG-HGDVRKVSVPTLVAGLVKMHVVKVASYNEH 325
Query: 316 LLALACQPS 324
ALA S
Sbjct: 326 TAALAGASS 334
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 6/282 (2%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VYS+G GQLGHG + + +PR + + G + Q + G T ++ + G+V+ FG+ +
Sbjct: 8 VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
FG+ G T V++P LV +L+ V Q A G T L G++YT+ G RLGH
Sbjct: 68 FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E P L+ +L+ V +AAG + + G + + G G G+LGHG T
Sbjct: 128 GDEVRQASP-KLVESLQGKEVTFVAAGGFHSSVII---EGGNLLTWGGGYFGQLGHGDET 183
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
D K P++++ Q VA G H ++ Q V TWG G +G LG G+EE + P
Sbjct: 184 DRKTPKMVKGVQQCIAHE--VACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPI 241
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++ AL V IH++TG + + ++ +G +Y++G G+ LGH
Sbjct: 242 MITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 23/322 (7%)
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
+ +VY++G+ G+ +G + T+ P+LV + V Q + GN TA+L G V+
Sbjct: 4 EGSEVYSWGQGVLGQLGHGDEKTQ--RQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVF 61
Query: 274 TFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
TF GN +LG +V L+ L+ V Q+A G+ + AL +Y+ G
Sbjct: 62 TFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQ---LYTWG 118
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G G+LGHG + P+L+E Q + VAAG +H++V+ + G + TWG G +G
Sbjct: 119 SGEYGRLGHGDEVRQASPKLVESLQ--GKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGHG+E PK+V+ + A VA G + T ++++ +V+++G GE LG I D
Sbjct: 177 LGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLG---IGD 233
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+ +HA P ++T+L+ V V+ IS H+ ALT G LY +G GDKGQL
Sbjct: 234 EE--KHAE---PIMITALQGVG--VIHISTGG-----FHSAALTSEGVLYTWGGGDKGQL 281
Query: 513 GIELVNNQTERGNPERVDIDLS 534
G N+Q E + D+S
Sbjct: 282 GHGDENSQNIPVVVEVISCDMS 303
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 24/252 (9%)
Query: 266 LSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+SREG VY++ G +LGH E +P ++ L V Q++ G + L
Sbjct: 1 MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGE 59
Query: 325 GMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
V++ G G G+LG G+ + P L+ Q +++ V A G H + +G++
Sbjct: 60 ---VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQV--ACGWHHTCALIDNGQL 114
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
TWG G YG LGHG+E ++ PK+V++L + VA G + + V+ E G++ ++G G
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYF 174
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH D + TP++V ++Q V HT LT+S +++
Sbjct: 175 GQLGHGDETDRK--------TPKMVKGVQQCIAHEVACG-------THHTLMLTQSQEVW 219
Query: 503 AFGAGDKGQLGI 514
+G+G+ G+LGI
Sbjct: 220 TWGSGEFGKLGI 231
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H+ A+ G +Y++GS G+LGHG + P+ + SLQG + AAG
Sbjct: 97 QVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFH 156
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ +I + G + +G FG+ +G + + +P++V+ ++ + A G T +L++
Sbjct: 157 SSVIIEGGNLLTWGGGYFGQLGHGDETDR--KTPKMVKGVQQCIAHEVACGTHHTLMLTQ 214
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+T+ G +LG E EP ++ L+ + V+ I+ G + AL + +
Sbjct: 215 SQEVWTWGSGEFGKLGIGDEEKHAEP-IMITALQGVGVIHISTGGFHSAALTSEG---VL 270
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIE 354
Y+ G G G+LGHG + P ++E
Sbjct: 271 YTWGGGDKGQLGHGDENSQNIPVVVE 296
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E+ +E + AG HS + G + ++G GQLGHG + P+ ++ +Q
Sbjct: 140 ESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIA 199
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ A G T++++ + +V+ +G FG + G+ + P ++ +L+ + V+ + G
Sbjct: 200 HEVACGTHHTLMLTQSQEVWTWGSGEFG--KLGIGDEEKHAEPIMITALQGVGVIHISTG 257
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
F +A L+ EG +YT+ G+ +LGH E + +NIPVV
Sbjct: 258 GFHSAALTSEGVLYTWGGGDKGQLGHGDENS-----------QNIPVV 294
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 11/307 (3%)
Query: 148 SQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S +G +S+A++ + VYS+G G+LGHG + + P+PIR+L G I++ A G
Sbjct: 69 SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGD 128
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T+ ++D G++++FG++ G+ G ++ PQ VESL+ V A G +
Sbjct: 129 THTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL--PQPVESLRGQEVTSIACGGEHSLAA 186
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V+ + WG LG + P + G LE + V +A G+ + ++A +G
Sbjct: 187 TSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRH--SIAADETG- 242
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
AVY+ G G+LGHG D+ P+ +E L +V+ AG W H + G++ +W
Sbjct: 243 AVYTFGWSKYGQLGHGDCIDQLVPKAVES---LKDSRIVLIAGGWRHTSAADDSGKLYSW 299
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G LG G+ + P VQ LN ++ G TF V+E GDV+S+G G + L
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQL 359
Query: 446 GHNAIAD 452
GHN D
Sbjct: 360 GHNEPKD 366
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 147/320 (45%), Gaps = 26/320 (8%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+R+ + G+ ++ + G ++G+ G+ +G + P+ + L
Sbjct: 14 LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEER--KKPRAIFHLMQASCSAV 71
Query: 257 AIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYC 314
G ++ LS+ VY++ WG+ RLGH + NDV P P+ L +V++A G
Sbjct: 72 CSGAEYSVALSQPRNEVYSWGWGDFGRLGH-GDCNDVFIPQPIR-ALAGRNIVKVACGDT 129
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+ LA+ ++S G G+LG G+ +D P+ +E L + +A G H+
Sbjct: 130 HTLAVT---DTGELFSFGRNQNGQLGLGTTSDAILPQPVES--LRGQEVTSIACGGEHSL 184
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G V WGWGRYG LG G E +P V L VK VA G + E G V
Sbjct: 185 AATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAV 244
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y+FG + LGH D L P+ V SLK + R+V I+ W HT A
Sbjct: 245 YTFGWSKYGQLGHGDCID--------QLVPKAVESLK--DSRIVLIAGG----WR-HTSA 289
Query: 495 LTESGKLYAFGAGDKGQLGI 514
+SGKLY++G GQLGI
Sbjct: 290 ADDSGKLYSWGWNKFGQLGI 309
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 14/297 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
A R + G H++AVT G ++SFG N +GQLG GTT + P+P+ SL+G +
Sbjct: 114 RALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEV 173
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
A G ++ + AG V+A+G +G G + + P V L+ + V A G
Sbjct: 174 TSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHL--PSQVHGLEGVKVTSVACG 231
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ G VYTF W +LGH + + P + +L++ +V IA G+ +
Sbjct: 232 WRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVE-SLKDSRIVLIAGGWRH--TS 288
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQ 378
A SG +YS G G+LG GS TD P + Q LN PV + + W H V +
Sbjct: 289 AADDSGK-LYSWGWNKFGQLGIGSNTDSNAPVPV---QGLNTSPVKLLSCGWRHTFAVTE 344
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN----DVKAIHVATGDYTTFVVSED 431
G V +WG G G LGH + + P + L+ ++ + V+ TT+V D
Sbjct: 345 AGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASPLTTYVPPAD 401
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 21/215 (9%)
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
+ ++ V ++ G + LAL +G+A+ S G G G+LGHG + K PR I F L+
Sbjct: 11 VSDLRVTSVSCGSSHSLALLS--NGIAL-SWGRGEDGQLGHGDAEERKKPRAI--FHLMQ 65
Query: 361 LQPVVVAAGAWHAAVVGQ-DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
V +GA ++ + Q V +WGWG +G LGHG+ +P+ ++AL + VA
Sbjct: 66 ASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA 125
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
GD T V++ G+++SFG ++ LG +D + PQ V SL+ + V
Sbjct: 126 CGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSD--------AILPQPVESLR--GQEVTS 175
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
I+ H+ A T +G ++A+G G G LG+
Sbjct: 176 IACGGE-----HSLAATSAGDVFAWGWGRYGNLGV 205
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 183/392 (46%), Gaps = 33/392 (8%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR+ AG HS+A+ S +V S+G GQLGHG EE P + +L I
Sbjct: 13 RRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVT 72
Query: 204 AGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
GA T +S++ + VY++G FG +G + PQ +++LK + V Q A G+
Sbjct: 73 CGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFI--PQPIKALKGLEVKQIACGDSH 130
Query: 263 TAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
++ +G V + + +LG HTE + + PH L E + V +AAG + A+
Sbjct: 131 CLAITTDGEVLGWGRNQNGQLGLGHTE-DVLTPHKLT-AFEGVAVKMLAAGAEHTTAVT- 187
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQD 379
+Y G G G LG G R D P + +L+ + VA G H V +
Sbjct: 188 --ENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKM----VACGWRHTICVAES 241
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G + T+GW +YG LGHG+ +P VQAL K + G TF + DG +Y +G
Sbjct: 242 GNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGW 301
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ +G D +PQLV L+ VVQ W HT A+T+ G
Sbjct: 302 NKFGQVGCGNTEDQS--------SPQLVKGLQDQVVTVVQCG------WR-HTLAMTDRG 346
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+Y++G G GQLG + +R P+R++I
Sbjct: 347 NVYSWGRGTSGQLGH---GDTVDRSTPKRIEI 375
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 11/320 (3%)
Query: 146 ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
E S G H+ A++ S VYS+G G+LGHG + + + P+PI++L+G+ + Q A
Sbjct: 67 EISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIAC 126
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + I+ G+V +G++ G+ G+ T+ V +P + + + + V A G T
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQ--LGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTT 184
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ G++Y + WG LG + + P + + + +A G+ + + C
Sbjct: 185 AVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL-MKMVACGWRHTI---CVAE 240
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVC 383
+Y+ G G+LGHG D P Q Q L + + G W H + DGR+
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIP---HQVQALKSKKIQAITGGWRHTFALDSDGRLY 297
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WGW ++G +G GN E +S P++V+ L D V G T +++ G+VYS+G G S
Sbjct: 298 GWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSG 357
Query: 444 SLGHNAIADGQGNRHANVLT 463
LGH D + +L+
Sbjct: 358 QLGHGDTVDRSTPKRIEILS 377
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 159/340 (46%), Gaps = 29/340 (8%)
Query: 193 SLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 250
S +G+R ++ +AGA ++ + V ++G+ G+ +G + P +V +L +
Sbjct: 8 SSRGVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF--PTIVSALDD 65
Query: 251 IFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
+ G T LS + VY++ WG+ RLGH + P P+ L+ + V QI
Sbjct: 66 CEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIK-ALKGLEVKQI 124
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G + LA+ V G G+LG G D P + F+ + ++ ++AAG
Sbjct: 125 ACGDSHCLAITTDGE---VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVK--MLAAG 179
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
A H V ++G++ WGWGRYG LG G+ E VP V A+ VA G T V+
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVA 239
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
E G++Y+FG + LGH AD L P V +LK + + W
Sbjct: 240 ESGNMYTFGWSKYGQLGHGDFAD--------HLIPHQVQALKSKKIQAITGG------WR 285
Query: 490 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HTFAL G+LY +G GQ+G N ++ +P+ V
Sbjct: 286 -HTFALDSDGRLYGWGWNKFGQVG---CGNTEDQSSPQLV 321
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P SL +R IQ A G ++ G+VY+ G
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 3991
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 3992 GAAGR--LGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + P L+ L I +V IA G + A+ S +Y+ G G G+LGH
Sbjct: 4050 KLGHGNRLSYDRPK-LVEDLLGIEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4105
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+++E Q + V +G V D V +WG G YG LG G +
Sbjct: 4106 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4165
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L + I V G + ++ G VY++G G+ LGH +V
Sbjct: 4166 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4217
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 4218 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4262
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 155/324 (47%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G VYS G ++G+LG G T+ P + S+Q + I + A +G
Sbjct: 3969 QLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGG 4028
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + + P+LVE L I +V A G +A +
Sbjct: 4029 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAI 4086
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P ++ L++ V+ +A G L C
Sbjct: 4087 TSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDD 4144
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L + V G+ + + + G V TWG
Sbjct: 4145 NVWSWGDGDYGKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWG 4202
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4203 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4262
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T +
Sbjct: 4263 DGTTSALQRPRLVHALQGKKITRV 4286
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 181/358 (50%), Gaps = 33/358 (9%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYA 220
+ VY +G N QLG G + + P+RS L ++ I A G+ ++S G++YA
Sbjct: 2950 QSAVYVWGLNDKDQLG-GLKGSKIKI-PVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYA 3007
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 278
G+ + G G+ + P+L+ L + + A+ G L+++G+V+++ G
Sbjct: 3008 CGEGTNGR--LGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 3065
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
D +LGH +P L+ +L++ + IA G + A+A S +Y+ G G G+
Sbjct: 3066 EDGKLGHGNCTTLDKPR-LIESLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGR 3121
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGH 395
LGHG + P+L+ Q L+ Q VV VA G+ A + DG V TWG G +G LG
Sbjct: 3122 LGHGDTATQMKPKLV---QALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGR 3178
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G + P +V LN + + V G + +++ G+V+++G G+ LGH G
Sbjct: 3179 GGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------G 3231
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N H +V P LV L+ +++V +++ H A+T++G++YA+G D GQ G
Sbjct: 3232 NDH-HVRKPTLVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3281
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG ++ + S+ G +Y+ G ++G+LG G P+ P S I+ + +G
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGK 3048
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G T + P+L+ESLK+ + A G+ +A ++
Sbjct: 3049 HALALTQDGKVFSWGEGEDGKLGHGNCTT--LDKPRLIESLKSKRIRDIACGSGHSAAIA 3106
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ L VVQ+A G ++ G
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPK-LVQALSGQRVVQVACGSRDAQTMSLTADG-C 3164
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G G GKLG G P L+++ L + V V GA + + + G V TWG
Sbjct: 3165 VYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3222
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3223 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3282
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
NR P LV L V ++SI W
Sbjct: 3283 GTTI---VNRK-----PSLVHELDDTRMNRVSCGSSHSIAW 3315
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ + L GI I+ A G +
Sbjct: 4026 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAA 4085
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G + T ++ +
Sbjct: 4086 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4143
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+++ G+ +LG +D PL + +L + V+++ G + +AL SG AV
Sbjct: 4144 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT--RSG-AV 4198
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4199 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4256
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4257 DEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4297
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 35/306 (11%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVL 266
+++S +G VY S E +Y PQ + S + + + G + A L
Sbjct: 478 LILSLSGNVYIMYYGS--ETQY----------PQRMHSFSDKPVTMIASHSDGKHYLA-L 524
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+++G VY++ G+ RLGH + EP L+ TL ++ IA G Y AL+ SG
Sbjct: 525 TQDGCVYSWGNGDGGRLGHGDNISHDEPK-LIETLLEKNIIFIACGSTYSAALSA--SG- 580
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+Y+ G G G+LGHGS D P L+ + + V +G V G V +WG
Sbjct: 581 ELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWG 640
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LG G + PK+V L D+ + V G + ++ G+VY++G G++ LG
Sbjct: 641 DGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLG 700
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H GN +V P+L+ SL+ ++++ +S+ + H ALTE +Y +G
Sbjct: 701 H-------GNEE-HVRYPKLIESLR--DKKIKDLSVGGT-----HILALTEDQFVYGWGR 745
Query: 507 GDKGQL 512
D GQ+
Sbjct: 746 NDYGQI 751
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 135/299 (45%), Gaps = 41/299 (13%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V A+G FG +SP +++ + + +LS G VY
Sbjct: 441 EVLAWGGVKFGNG----------SSPFYCDAIAELGIKHLCCTERALLILSLSGNVYIMY 490
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+G++ + + + + PV IA+ LA G VYS G G G
Sbjct: 491 YGSETQYPQR-----------MHSFSDKPVTMIASHSDGKHYLALTQDG-CVYSWGNGDG 538
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG P+LIE LL + +A G+ ++A + G + TWG G YG LGHG
Sbjct: 539 GRLGHGDNISHDEPKLIET--LLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHG 596
Query: 397 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+ + +VP +V L +HVA +GD T V+ G V+S+G G+ LG +DG
Sbjct: 597 SNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-SDGS 655
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP++V L +N VV++ + ALT G++Y +G GD +LG
Sbjct: 656 K-------TPKIVDKLLDIN--VVRVFCGGQF-----SAALTARGEVYTWGKGDAYRLG 700
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T G VYS+G+ G+LGHG P+ I +L II A G+ + +S +
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSAS 579
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G VT P LV +LK VV A G+ + L F
Sbjct: 580 GELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+ +LG P ++ L +I VV++ G + AL + VY+ G
Sbjct: 638 SWGDGDYGKLGRGGSDGSKTPK-IVDKLLDINVVRVFCGGQFSAALTARGE---VYTWGK 693
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHG+ ++P+LIE + ++ + V G H + +D V WG YG +
Sbjct: 694 GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSV--GGTHILALTEDQFVYGWGRNDYGQI 751
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
S P + L+ I +A+G +F
Sbjct: 752 DPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSF 784
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG P P +L + +Q+A G L A+
Sbjct: 3926 LSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPC-ESLSALRPIQLAGGEQTLFAVTADG 3984
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VYS G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3985 K---VYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVY 4041
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN PK+V+ L ++ + +A G + + ++ G +Y++G G
Sbjct: 4042 SWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4101
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH +D Q L P++V +L+ + +V+ ++ + +A T +T+ +++
Sbjct: 4102 RLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4148
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4149 WGDGDYGKLG 4158
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+++ G +Y++G + G+LGHG+ ++ P + +L+G ++ A G+G +T+
Sbjct: 569 GSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTL 628
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+++G +G+ G G+ +P++V+ L +I VV+ G F+A L+ G
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRG--GSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
VYT+ G+ RLGH E + P L+ +L + + ++ G ++LAL
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPK-LIESLRDKKIKDLSVGGTHILAL 734
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG LG +P + L+ +K IH+A G T F+VS++G +Y+
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3008
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + L G G+ + N+ P+L+ L Q + V + H ALT+
Sbjct: 3009 GEGTNGRL-------GLGDDY-NMCEPKLIPFLSQYVIKKVAVHSGGK-----HALALTQ 3055
Query: 498 SGKLYAFGAGDKGQLG 513
GK++++G G+ G+LG
Sbjct: 3056 DGKVFSWGEGEDGKLG 3071
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G G+LG G ++ P+ + L I +++ G +
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAA 681
Query: 212 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+VY +GK G+A G + V P+L+ESL++ + ++G L+ +
Sbjct: 682 LTARGEVYTWGK---GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQ 738
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
VY + + ++ P EP L TL + V+ +A+G
Sbjct: 739 FVYGWGRNDYGQIDPTLGPVVSEPS-LCPTLSSKNVIGLASG 779
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 4237 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAW 4296
Query: 213 SDA 215
S A
Sbjct: 4297 STA 4299
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G S A+T++G VY++G + +LGHG E P+ I SL+ +I + G
Sbjct: 671 RVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTH 730
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ +++ VY +G++ +G+ + + +V+ P L +L + V+ A G
Sbjct: 731 ILALTEDQFVYGWGRNDYGQIDPTL--GPVVSEPSLCPTLSSKNVIGLASG 779
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 174/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P SL +R IQ A G ++ G+VY+ G
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 4002
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 4003 GAAGR--LGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + + P L+ L + ++ IA G + A+ S +Y+ G G G+LGH
Sbjct: 4061 KLGHGNKMSYDRPK-LIEDLLGVEIIDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4116
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+++E Q + V +G V D V +WG G YG LG G +
Sbjct: 4117 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4176
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L + I V G + ++ G VY++G G+ LGH +V
Sbjct: 4177 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4228
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 4229 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4273
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 176/355 (49%), Gaps = 27/355 (7%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
+ VY +G N QLG + P L ++ I A G+ ++S G++YA G
Sbjct: 2960 ESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3019
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 280
+ + G G+ V P+ + L + + A+ G L+++G+V+++ G D
Sbjct: 3020 EGTNGR--LGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3077
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH + +P L+ TL++ + IA G + A+A S +Y+ G G G+LG
Sbjct: 3078 GKLGHGNNMSLDKPK-LIETLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLG 3133
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE 398
HG + P+L++ L+ + V VA G+ A + DG V +WG G +G LG G
Sbjct: 3134 HGDTVTQARPKLVQT--LVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 3191
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P VV+ LN + + V G + +++ G+V+++G G+ LGH GN H
Sbjct: 3192 DGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH 3244
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P LV L+ +++V +++ H A+T++G++YA+G D GQ G
Sbjct: 3245 -HVRKPTLVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3291
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 162/342 (47%), Gaps = 19/342 (5%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 207
IAG ++ + S+ G +Y+ G ++G+LG G P+PI L I + A +G
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGK 3058
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + + P+L+E+LK+ + A G+ +A ++
Sbjct: 3059 HALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACGSGHSAAIA 3116
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH P L+ TL VVQ+A G +A G
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPK-LVQTLVGHRVVQVACGSRDAQTMALTTDG-C 3174
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P ++E+ L + V V GA + + + G V TWG
Sbjct: 3175 VYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3232
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G +
Sbjct: 3233 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--- 3289
Query: 448 NAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 488
QGN +V P LV L+ V ++SI W
Sbjct: 3290 ------QGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIAW 3325
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G VYS G ++G+LG G T+ P + S+Q + I + A +G
Sbjct: 3980 QLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGG 4039
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + + P+L+E L + ++ A G +A +
Sbjct: 4040 KHCLALSSEGHVYSWGEGDDGKLGHGNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAI 4097
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P ++ L++ V+ +A G L C
Sbjct: 4098 TSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDD 4155
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L + V G+ + + + G V TWG
Sbjct: 4156 NVWSWGDGDYGKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWG 4213
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4214 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4273
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ I L G+ II A G +
Sbjct: 4037 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAA 4096
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G + T ++ +
Sbjct: 4097 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4154
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+++ G+ +LG +D PL + +L + V+++ G + +AL SG AV
Sbjct: 4155 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT--RSG-AV 4209
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4210 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4267
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4268 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4308
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 17/277 (6%)
Query: 237 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
+L TS + S + Q A+ A +E VY + + +LG + + ++
Sbjct: 2928 QLTTSVSFLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLGG-LKGSKIKLPV 2986
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L + + IA G L ++ + +Y+ G G G+LG G + P+ I
Sbjct: 2987 YSEVLSKLKPIHIAGGSKTLFIVSQEGK---LYACGEGTNGRLGLGDDNNVCEPKPIPFL 3043
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
++ V V +G HA + QDG+V +WG G G LGHGN PK+++ L +
Sbjct: 3044 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR 3103
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
+A G + ++ +G++Y++G GE LGH G A P+LV +L V R
Sbjct: 3104 DIACGSGHSAAIASNGELYTWGLGEYGRLGH-----GDTVTQAR---PKLVQTL--VGHR 3153
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VVQ++ + +A T ALT G +Y++G GD G+LG
Sbjct: 3154 VVQVACGSR---DAQTMALTTDGCVYSWGDGDFGKLG 3187
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 35/306 (11%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 266
M++S G VY S E +Y PQ V + V A G A L
Sbjct: 478 MILSLNGNVYNMYHGS--ETQY----------PQRVHGFSDKLVTMIASHSDGKHHLA-L 524
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+++G VY++ G+ RLGH + EP + LE +V IA G Y AL+ SG
Sbjct: 525 TQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEK-NIVFIACGSTYSAALSV--SG- 580
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+Y+ G G G+LGHG+ D P L+ + + V +G V G V +WG
Sbjct: 581 ELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWG 640
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LG G + PK+V L D+ + V G + ++ G+VY++G G++ LG
Sbjct: 641 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG 700
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H + +V P+++ SL+ + + + T H LTE +Y +G
Sbjct: 701 HGS--------EEHVRYPKIIESLRDKKIKDLSVGAT-------HILVLTEDQFVYGWGR 745
Query: 507 GDKGQL 512
D GQ+
Sbjct: 746 NDYGQI 751
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 10/273 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T G VYS+G+ G+LGHG T P+ I +L I+ A G+ + +S +
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVS 579
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G ++ P LV +LK VV A G+ + L F
Sbjct: 580 GELYTWGRGNYGRLGHGNFDDVMI--PTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 637
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+ +LG P ++ L +I VV++ G + AL VY+ G
Sbjct: 638 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGSQFSAALTAHGE---VYTWGK 693
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHGS ++P++IE + ++ + V GA H V+ +D V WG YG +
Sbjct: 694 GDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSV--GATHILVLTEDQFVYGWGRNDYGQI 751
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
S P + L+ I +A+G +F
Sbjct: 752 DPTLGSVISEPTLCPTLSSKTVIGLASGPTQSF 784
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG P P P +L + +Q+A G L A+
Sbjct: 3937 LSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTADG 3995
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VYS G G G+LG G P L+E Q + ++ V V++G H + +G V
Sbjct: 3996 K---VYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVY 4052
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN+ PK+++ L V+ I +A G + + ++ G +Y++G G
Sbjct: 4053 SWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYG 4112
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH +D Q L P++V +L+ + +V+ ++ + +A T +T+ +++
Sbjct: 4113 RLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4159
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4160 WGDGDYGKLG 4169
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 41/299 (13%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V A+G FG ++P +++ + + Q +LS G VY
Sbjct: 441 EVLAWGGVKFGNG----------STPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMY 490
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G++ + P + G + + V IA+ LA G VYS G G G
Sbjct: 491 HGSETQY----------PQRVHGFSDKL-VTMIASHSDGKHHLALTQDG-CVYSWGNGDG 538
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG P+LIE LL V +A G+ ++A + G + TWG G YG LGHG
Sbjct: 539 GRLGHGDTVSYDEPKLIEA--LLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHG 596
Query: 397 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
N + +P +V L +HVA +GD T V+ G V+S+G G+ LG DG
Sbjct: 597 NFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-TDGS 655
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP++V L +N VV++ + + ALT G++Y +G GD +LG
Sbjct: 656 K-------TPKIVDKLLDIN--VVKVFCGSQF-----SAALTAHGEVYTWGKGDTYRLG 700
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A++ G +Y++G + G+LGHG ++ P + +L+G ++ A G+G +T+
Sbjct: 569 GSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTL 628
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+++G +G+ G GT +P++V+ L +I VV+ G+ F+A L+ G
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 686
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
VYT+ G+ RLGH +E + P ++ +L + + ++ G ++L L
Sbjct: 687 EVYTWGKGDTYRLGHGSEEHVRYPK-IIESLRDKKIKDLSVGATHILVL 734
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G +I+ A GA
Sbjct: 3210 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALH 3269
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L++ V + + G+
Sbjct: 3270 CLAVTDTGQVYAWGDNDHGQQGNGT--TSVNRKPSLVHELEDARVNRVSCGS 3319
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G G+LG G T+ P+ + L I +++ G+ +
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAA 681
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G+VY +GK +G + + V P+++ESL++ + ++G VL+ +
Sbjct: 682 LTAHGEVYTWGKGDTYRLGHGSE--EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQF 739
Query: 272 VYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
VY WG ND T + + L TL + V+ +A+G
Sbjct: 740 VY--GWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASG 779
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 4248 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAW 4307
Query: 213 SDA 215
S A
Sbjct: 4308 STA 4310
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G S A+T+ G VY++G + +LGHG+ E P+ I SL+ +I + GA
Sbjct: 671 KVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATH 730
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+++++ VY +G++ +G+ + + +++ P L +L + V+ A G
Sbjct: 731 ILVLTEDQFVYGWGRNDYGQIDPTL--GSVISEPTLCPTLSSKTVIGLASG 779
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P SL +R IQ A G ++ G++Y+ G
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGY 4053
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 4054 GAAGR--LGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + + P L+ L + +V IA G + A+ S +Y+ G G G+LGH
Sbjct: 4112 KLGHGNKVSYDRPK-LIEDLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4167
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+++E Q + V +G V D V +WG G YG LG G +
Sbjct: 4168 GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4227
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L + + V G + ++ G VY++G G+ LGH +V
Sbjct: 4228 KVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4279
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 4280 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4324
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 27/355 (7%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
+ VY +G N QLG + P +L ++ I A G+ ++S G++YA G
Sbjct: 3011 QSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3070
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 280
+ + G G+ + P+ + L + + A+ G L+++G+V+++ G D
Sbjct: 3071 EGTNGR--LGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH + +P L+ L++ + IA G + A+A S +Y+ G G G+LG
Sbjct: 3129 GKLGHGNCISLDKPK-LIEVLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLG 3184
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE 398
HG + P+L++ L+ + V VA G+ A + DG V +WG G +G LG G
Sbjct: 3185 HGDTITQTRPKLVQA--LIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGS 3242
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P +V LN++ I V G + +++ G+V+++G G+ LGH GN H
Sbjct: 3243 DGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH 3295
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P LV L+ ++++ +++ H A+T++G++YA+G D GQ G
Sbjct: 3296 -HVRKPTLVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3342
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G +YS G ++G+LG G T+ P + S+Q + I + A +G
Sbjct: 4031 QLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGG 4090
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + + P+L+E L + +V A G +A +
Sbjct: 4091 KHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAI 4148
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P ++ L++ V+ +A G L C
Sbjct: 4149 TSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYKVIDVACGSGDAQTL-CVTDDD 4206
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4207 NVWSWGDGDYGKLGRGGSDGCKVPLKID--SLAGLGVVKVECGSQFSVALTRSGAVYTWG 4264
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4265 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4324
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 158/342 (46%), Gaps = 19/342 (5%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 207
IAG ++ + S+ G +Y+ G ++G+LG G P+ I L I + A +G
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGK 3109
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + P+L+E LK+ + A G+ +A ++
Sbjct: 3110 HALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEVLKSKRIRDIACGSGHSAAIA 3167
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH P L+ L VVQ+A G +A G
Sbjct: 3168 SNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALIGHRVVQVACGSRDAQTMALTTDGY- 3225
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P L+++ NL + V GA + + + G V TWG
Sbjct: 3226 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLN--NLGVIQVECGAQFSLALTKYGEVWTWGK 3283
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G +
Sbjct: 3284 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--- 3340
Query: 448 NAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 488
QGN +V P LV L+ V ++SI W
Sbjct: 3341 ------QGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAW 3376
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H IA++S+G VYS+G G+LGHG RP+ I L G+ I+ A G +
Sbjct: 4088 SGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 4147
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G + T ++ +
Sbjct: 4148 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 4205
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+++ G+ +LG +D PL + +L + VV++ G + +AL SG AV
Sbjct: 4206 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT--RSG-AV 4260
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4261 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 4318
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4319 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4359
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVL 266
M++S G VY S E +Y PQ V + + A G + A L
Sbjct: 537 MILSLNGNVYNMYHGS--ETQY----------PQRVHGFSDKPITMIASHADGKHYLA-L 583
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+++G VY++ G+ RLGH + EP + LE ++ IA G Y AL+
Sbjct: 584 TQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEK-NIIFIACGSTYSAALSANGE-- 640
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+Y+ G G G+LGHG+ D P L+ + + V +G V G V +WG
Sbjct: 641 -LYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWG 699
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LG G + PK+V L D+ + V G + ++ G+VY++G G++ LG
Sbjct: 700 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG 759
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H + +V P+++ SL+ + +V +S+ + H ALTE +Y +G
Sbjct: 760 HGS--------EEHVRYPKVIESLR--DRKVKDLSVGTT-----HILALTEDQFVYGWGR 804
Query: 507 GDKGQL 512
D GQ+
Sbjct: 805 NDYGQI 810
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 135/299 (45%), Gaps = 41/299 (13%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V A+G FG ++P +++ + + Q +LS G VY
Sbjct: 500 EVLAWGGVKFGNG----------STPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMY 549
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G++ + P + G + P+ IA+ LA G VYS G G G
Sbjct: 550 HGSETQY----------PQRVHG-FSDKPITMIASHADGKHYLALTQDG-CVYSWGNGDG 597
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG P+LIE LL + +A G+ ++A + +G + TWG G YG LGHG
Sbjct: 598 GRLGHGDTISYDEPKLIEA--LLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHG 655
Query: 397 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
N + P +V L +HVA +GD T V+ G V+S+G G+ LG DG
Sbjct: 656 NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-TDGS 714
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP++V L +N VV++ + + ALT G++Y +G GD +LG
Sbjct: 715 K-------TPKIVDKLLDIN--VVKVFCGSQF-----SAALTAHGEVYTWGKGDAYRLG 759
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG P P P +L + +Q+A G L A+
Sbjct: 3988 LSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTADG 4046
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+YS G G G+LG G P L+E Q + ++ V V++G H + +G V
Sbjct: 4047 K---IYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVY 4103
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN+ PK+++ L V+ + +A G + + ++ G +Y++G G
Sbjct: 4104 SWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4163
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH +D Q L P++V +L+ + +V+ ++ + +A T +T+ +++
Sbjct: 4164 RLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4210
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4211 WGDGDYGKLG 4220
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T G VYS+G+ G+LGHG T P+ I +L II A G+ + +S
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSAN 638
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G V +P LV +LK VV A G+ + L F
Sbjct: 639 GELYTWGRGNYGRLGHG--NFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 696
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+ +LG P ++ L +I VV++ G + AL VY+ G
Sbjct: 697 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGSQFSAALTAHGE---VYTWGK 752
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHGS ++P++IE + ++ + V G H + +D V WG YG +
Sbjct: 753 GDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSV--GTTHILALTEDQFVYGWGRNDYGQI 810
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
S P + L+ I +A+G +F
Sbjct: 811 DPTLGPIISEPTLCPTLSSKTVIGLASGPTQSF 843
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+++ G +Y++G + G+LGHG ++ P + +L+G ++ A G+G +T+
Sbjct: 628 GSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTL 687
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+++G +G+ G GT +P++V+ L +I VV+ G+ F+A L+ G
Sbjct: 688 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 745
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
VYT+ G+ RLGH +E + P ++ +L + V ++ G ++LAL
Sbjct: 746 EVYTWGKGDAYRLGHGSEEHVRYPK-VIESLRDRKVKDLSVGTTHILAL 793
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G +II A GA
Sbjct: 3261 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 3320
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L++ V + + G+
Sbjct: 3321 CLAVTDTGQVYAWGDNDHGQQGNGT--TSVNRKPSLVHDLEDARVNRVSCGS 3370
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G G+LG G T+ P+ + L I +++ G+ +
Sbjct: 681 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAA 740
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G+VY +GK +G + + V P+++ESL++ V ++G L+ +
Sbjct: 741 LTAHGEVYTWGKGDAYRLGHGSE--EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQF 798
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
VY + + ++ P EP L TL + V+ +A+G
Sbjct: 799 VYGWGRNDYGQIDPTLGPIISEP-TLCPTLSSKTVIGLASG 838
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG LG +P + L+ +K IH+A G T F+VS++G +Y+
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + LG G N N+ P+ + L Q + V + H ALT+
Sbjct: 3070 GEGTNGRLGL-----GDDN---NMCEPKAIPFLSQFVIKKVAVHSGGK-----HALALTQ 3116
Query: 498 SGKLYAFGAGDKGQLG 513
GK++++G G+ G+LG
Sbjct: 3117 DGKVFSWGEGEDGKLG 3132
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 4299 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAW 4358
Query: 213 SDA 215
S A
Sbjct: 4359 STA 4361
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G S A+T+ G VY++G + +LGHG+ E P+ I SL+ ++ + G
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTH 789
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ +++ VY +G++ +G+ + + +++ P L +L + V+ A G
Sbjct: 790 ILALTEDQFVYGWGRNDYGQIDPTL--GPIISEPTLCPTLSSKTVIGLASG 838
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P I SL +R IQ G ++ G++YA G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V++P L+ES++++ + + A+ G LS EG VY++ G D
Sbjct: 3241 GASGR--LGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L V+ IA G + AC S +Y+ G G G+LGH
Sbjct: 3299 KLGHGNRTQCDRPR-VIESLRGKEVIDIACGGAHS---ACVTSSGELYTWGKGRYGRLGH 3354
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P++ + + + V +G + D V +WG G YG LG G +
Sbjct: 3355 GDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGC 3414
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP+ V AL+ + V G + +++ G VY++G G+ LGH + +V
Sbjct: 3415 KVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGS--------DDHV 3466
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++ G++Y +G D+GQLG
Sbjct: 3467 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDQGEVYTWGDNDEGQLG 3511
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 172/357 (48%), Gaps = 23/357 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G AVT+ G +Y+ G +SG+LG G T+ P + S+Q + I + A +G
Sbjct: 3218 QIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGG 3277
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ V+ A G +A +
Sbjct: 3278 KHALALSVEGEVYSWGEGEDGKLGHGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACV 3335
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P + L+ V+ +A G L C
Sbjct: 3336 TSSGELYTWGKGRYGRLGHGDSEDQLRPK-MADALKGYRVIDVACGSGDSQTL-CISDDD 3393
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P+ ++ + + V G+ + + + G V TWG
Sbjct: 3394 NVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGV--CKVECGSQFSIALTKSGCVYTWG 3451
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ V AL K I +ATG S+ G+VY++G + LG
Sbjct: 3452 KGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG 3511
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P++VT+L+ +TN +AHT A + S L+A
Sbjct: 3512 -----DGTTN---AIQRPRIVTALQDKK-------ITNVACGSAHTVAWSTSKPLHA 3553
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 174/352 (49%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P L ++++ A G+ +++ G+VYA G+ +
Sbjct: 2208 VFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ ++ V P+ V L V + A+ G L+ +G+V+++ G+D +L
Sbjct: 2268 NGR--LGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2325
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + N +P LL L+ + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 2326 GHLSRMNCEKPR-LLEALKTKRIRDIACGSSHSAAVT---SSGELYTWGLGEYGRLGHGD 2381
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 401
T + P+L++ L+ + + VA G+ A + +G V +WG G +G LG G E
Sbjct: 2382 STTQLRPKLVKA--LVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGC 2439
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
SVP V+ LN I + G + +++ G V+++G G+ LGH ++V
Sbjct: 2440 SVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGT--------DSHV 2491
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
PQ+ LK ++++ +++ H A+T++G+++A+G D GQ G
Sbjct: 2492 RKPQVAEGLK--GKKIIHVAVGA-----LHCLAVTDTGQVFAWGDNDHGQQG 2536
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A++ +G VYS+G G+LGHG + RPR I SL+G +I A G +
Sbjct: 3275 SGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSAC 3334
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
++ +G++Y +GK +G +G +L P++ ++LK V+ A G+ T +S +
Sbjct: 3335 VTSSGELYTWGKGRYGRLGHGDSEDQL--RPKMADALKGYRVIDVACGSGDSQTLCISDD 3392
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + L +I V ++ G + +AL SG VY
Sbjct: 3393 DNVWSWGDGDYGKLGRGGSDGCKVPQK-VDALSSIGVCKVECGSQFSIALT--KSG-CVY 3448
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + PR + Q + + +A G+ H G V TWG
Sbjct: 3449 TWGKGDYHRLGHGSDDHVRRPRKVAALQGKKI--ISIATGSLHCVACSDQGEVYTWGDND 3506
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G P++V AL D K +VA G T S +++ ++ + +N
Sbjct: 3507 EGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLHAGRLPQTVPMEYNL 3566
Query: 450 IAD 452
+ +
Sbjct: 3567 LRE 3569
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 29/302 (9%)
Query: 217 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
+V+ +G KD G G +G+K+ T P L E L ++ VV A G+ V++ EG+VY
Sbjct: 2207 KVFVWGLNDKDQLG----GPRGSKIKT-PVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVY 2261
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
G + RLG + N P + G L V ++A A+A G V+S G
Sbjct: 2262 ACGEGTNGRLGLGSSQNVDIPKQVNG-LSQYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 2319
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G GKLGH SR + + PRL+E + ++ +A G+ H+A V G + TWG G YG L
Sbjct: 2320 GDDGKLGHLSRMNCEKPRLLEALKTKRIRD--IACGSSHSAAVTSSGELYTWGLGEYGRL 2377
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
GHG+ + PK+V+AL + I VA G D T ++++G VYS+G G+ LG
Sbjct: 2378 GHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG--- 2434
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
G+ +V P V L + V+QI + ALT++G+++ +G GD +
Sbjct: 2435 ---GSEGCSV--PHNVERLN--GQGVIQIECGAQF-----SLALTKAGQVWTWGKGDYFR 2482
Query: 512 LG 513
LG
Sbjct: 2483 LG 2484
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 156/334 (46%), Gaps = 18/334 (5%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRTMLISDA 215
VT++G VY+ G ++G+LG G+++ P+ + L ++ + +G M ++
Sbjct: 2252 FVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVD 2311
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+V+++G+ G+ G P+L+E+LK + A G+ +A ++ G +YT+
Sbjct: 2312 GKVFSWGEGDDGK--LGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G RLGH + P L+ L V+Q+A G L GM VYS G G
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPK-LVKALVGKRVIQVACGSRDAQTLTLTDEGM-VYSWGDGD 2427
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GKLG G P +E+ LN Q V+ + GA + + + G+V TWG G Y LG
Sbjct: 2428 FGKLGRGGSEGCSVPHNVER---LNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG 2484
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HG + P+V + L K IHVA G V++ G V+++G + H DG
Sbjct: 2485 HGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDND-----HGQQGDGS 2539
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ P LV L+ V V ++S W
Sbjct: 2540 TTVNKK---PALVQGLEGVRITRVACGSSHSTAW 2570
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 10/272 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR + +L+ RI A G+ +
Sbjct: 2300 SGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAA 2359
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
++ +G++Y +G +G +G T+L P+LV++L V+Q A G + T L+ E
Sbjct: 2360 VTSSGELYTWGLGEYGRLGHGDSTTQL--RPKLVKALVGKRVIQVACGSRDAQTLTLTDE 2417
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY++ G+ +LG PH + L V+QI G + LAL V+
Sbjct: 2418 GMVYSWGDGDFGKLGRGGSEGCSVPHN-VERLNGQGVIQIECGAQFSLALT---KAGQVW 2473
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + + P++ E + + + VA GA H V G+V WG
Sbjct: 2474 TWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKI--IHVAVGALHCLAVTDTGQVFAWGDND 2531
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G G+ P +VQ L V+ VA G
Sbjct: 2532 HGQQGDGSTTVNKKPALVQGLEGVRITRVACG 2563
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 122/223 (54%), Gaps = 10/223 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS AVTS G +Y++G G+LGHG + + RP+ +++L G R+IQ A G+ +T+
Sbjct: 2353 GSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTL 2412
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G VY++G FG + G G++ + P VE L V+Q G F+ L++ G
Sbjct: 2413 TLTDEGMVYSWGDGDFG--KLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAG 2470
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V+T+ G+ RLGH T+ + +P G L+ ++ +A G + LA+ V++
Sbjct: 2471 QVWTWGKGDYFRLGHGTDSHVRKPQVAEG-LKGKKIIHVAVGALHCLAVT---DTGQVFA 2526
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
G G+ G GS T K P L++ + + + VA G+ H+
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGLEGVRI--TRVACGSSHS 2567
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 121/249 (48%), Gaps = 19/249 (7%)
Query: 267 SREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
SRE + F WG ND + ++ L L ++ VV A G L + +
Sbjct: 2201 SREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGK- 2259
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
VY+ G G G+LG GS + P+ + ++ V V +G HA + DG+V +W
Sbjct: 2260 --VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317
Query: 386 GWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G G G LGH CE P++++AL + +A G + V+ G++Y++G GE
Sbjct: 2318 GEGDDGKLGHLSRMNCEK-PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH L P+LV +L V +RV+Q++ + +A T LT+ G +Y++
Sbjct: 2377 LGHGD--------STTQLRPKLVKAL--VGKRVIQVACGSR---DAQTLTLTDEGMVYSW 2423
Query: 505 GAGDKGQLG 513
G GD G+LG
Sbjct: 2424 GDGDFGKLG 2432
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 26/258 (10%)
Query: 266 LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
++R +T SWG + GH+ E V+ + +L ++ +QI G
Sbjct: 3166 MNRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQT 3225
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
L A+ +Y+ G G G+LG G P L+E Q ++++ V V +G HA
Sbjct: 3226 LFAVTADGK---LYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALA 3282
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ +G V +WG G G LGHGN P+V+++L + I +A G + V+ G++Y
Sbjct: 3283 LSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELY 3342
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G LGH D L P++ +LK RV+ ++ + ++ T +
Sbjct: 3343 TWGKGRYGRLGHGDSEDQ--------LRPKMADALK--GYRVIDVACGSG---DSQTLCI 3389
Query: 496 TESGKLYAFGAGDKGQLG 513
++ ++++G GD G+LG
Sbjct: 3390 SDDDNVWSWGDGDYGKLG 3407
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHGT +P+ L+G +II A GA
Sbjct: 2455 QIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALH 2514
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQV+A+G + G+ G T + P LV+ L+ + + + A G+
Sbjct: 2515 CLAVTDTGQVFAWGDNDHGQQGDG--STTVNKKPALVQGLEGVRITRVACGS 2564
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 182 TEEEWRPRPIRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKL 238
++++ P+ + L+ + + A G+ G+T+ ++D G +++FG +G+ G G KL
Sbjct: 2 SDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKL 61
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY---TFSWGNDA 281
P+LV+ L+ V A GN F+ +L++ G VY TF+W + A
Sbjct: 62 ---PKLVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSA 104
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G ++AVT G+++SFG+ G+LG G ++ P+ + LQG + A G +++++
Sbjct: 29 GQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCGNQFSVILTK 88
Query: 215 AGQVY 219
G VY
Sbjct: 89 TGTVY 93
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
LTP+LV+ LK+ ++ V I+L ++ + T A+T++G L++FG GD G+LG
Sbjct: 6 LTPKLVSGLKE--QKFVHIALGSN---DGQTLAVTDTGLLFSFGNGDYGKLG 52
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 397 NEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
N + + PK+V L + K +H+A G D T V++ G ++SFG G+ LG +DG
Sbjct: 1 NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGG-SDG- 58
Query: 455 GNRHANVLTPQLVTSLKQV--------NERVVQISLTNSIYWNAHTFALTES 498
P+LV L+ N+ V ++ T ++Y TFA T S
Sbjct: 59 ------CKLPKLVDKLQGQHAVIACCGNQFSVILTKTGTVY-TCLTFAWTSS 103
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 23/363 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S VV SFG GQLGHG E+ PR I +L I A GA T
Sbjct: 12 AGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTA 71
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +Y++G FG +G V P +++L+ + + Q A G+ ++ +G
Sbjct: 72 YSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIKALQGLEIRQIACGDSHCLAVTADG 129
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VY++ + +LG + + PH LL E + V +AAG + A+ G +Y
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVT---DGGKLYG 185
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P E + + + +VA G H V Q G++ T+GW +Y
Sbjct: 186 WGWGRYGNLGLGDRGDRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ +P V AL + V+ G T ++E G +Y +G + +G +
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDV 303
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D H +PQL+ S+ ++RVVQ+S W HT A+T+ +Y++G G G
Sbjct: 304 DD-----HT---SPQLI-SIPGQHQRVVQVSCG----WR-HTVAVTDKNNVYSWGRGTSG 349
Query: 511 QLG 513
QLG
Sbjct: 350 QLG 352
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 27/335 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA T+ + V +FG+ G+ +G + + P+++ +L + + A
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL--PRIIGALNDCEISLVA 63
Query: 258 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G + TA + +Y++ WG+ RLGH + PHP+ L+ + + QIA G +
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ VYS G G+LG G D P + F+ ++++ ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G++ WGWGRYG LG G+ +P V A+ D K VA G T VS+ G +Y+
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH AD L P V +L + N + Q+S W HT ALT
Sbjct: 238 YGWSKYGQLGHGDYAD--------HLLPHQVAALAEFN--ITQVSGG----WR-HTVALT 282
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
E+GKLY +G GQ+G V++ T +P+ + I
Sbjct: 283 EAGKLYGWGWNKFGQVGSGDVDDHT---SPQLISI 314
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 137/274 (50%), Gaps = 14/274 (5%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G H +AVT+ G VYS+G N +GQLG G T++ P + + +G+ + AAG
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAG 170
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
A T ++D G++Y +G +G G +G +++ P V ++ + + A G T
Sbjct: 171 AEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAVGDEKMCMVACGWRHTIA 228
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+S+ G++YT+ W +LGH + + PH + L + Q++ G+ + +AL
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLPHQ-VAALAEFNITQVSGGWRHTVALT---EA 284
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+Y G G++G G D P+LI Q Q + V V+ G H V V
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV----VQVSCGWRHTVAVTDKNNV 340
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALN-DVKA 415
+WG G G LGHG+ S PK +QAL+ D KA
Sbjct: 341 YSWGRGTSGQLGHGDAVDRSAPKGIQALSADGKA 374
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 146 ENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
E S G H+ A + ++ +YS+G G+LGHG + + + P PI++LQG+ I Q A
Sbjct: 58 EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIAC 117
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++ G+VY++G++ G+ G LV P + + + + V A G TA
Sbjct: 118 GDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLAFEGVSVKMLAAGAEHTA 175
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQ 322
++ G++Y + WG LG + + P P +G + + +A G+ + +A++
Sbjct: 176 AVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEKMCMVACGWRHTIAVS-- 230
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGR 381
SG +Y+ G G+LGHG D P + N+ V +G W H + + G+
Sbjct: 231 QSG-KLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV---SGGWRHTVALTEAGK 286
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+ WGW ++G +G G+ + + P+++ + + V+ G T V++ +VYS+G G
Sbjct: 287 LYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346
Query: 441 ESASLGHNAIAD 452
S LGH D
Sbjct: 347 TSGQLGHGDAVD 358
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 170/352 (48%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P SL +R IQ A G ++ G+VYA G
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGY 3953
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G G V P L+ES++++F+ + A+ G LS EG VY++ G+D
Sbjct: 3954 GALGR--LGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P L+ L +V IA G + A++ S +Y+ G G G+LGH
Sbjct: 4012 KLGHGNRITYDRPK-LIEALLGTEIVDIACGGHHSAAIS---SAGWLYTWGKGRYGRLGH 4067
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P ++ Q + V +G V D V +WG G YG LG G +
Sbjct: 4068 GDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4127
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP +++L + + V G + ++ G VY++G G+ LGH +V
Sbjct: 4128 KVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHV 4179
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V++L+ +++V I+ T S+ H A ++ G++Y +G D+GQLG
Sbjct: 4180 RRPRKVSALQ--GKKIVSIA-TGSL----HCVACSDKGEVYTWGDNDEGQLG 4224
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 16/343 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G VY+ G + G+LG G + P + S+Q + I + A +G
Sbjct: 3931 QLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGG 3990
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + T P+L+E+L +V A G +A +
Sbjct: 3991 KHCLALSSEGHVYSWGEGDDGKLGHGNRIT--YDRPKLIEALLGTEIVDIACGGHHSAAI 4048
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
S G +YT+ G RLGH + ++P ++ L+ V+ +A G L C
Sbjct: 4049 SSAGWLYTWGKGRYGRLGHGDSDDQLKP-TVVTALQGYKVIDVACGSGDAQTL-CVTDDD 4106
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L V V G+ + + + G V TWG
Sbjct: 4107 NVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLAGLGVVKVECGSQFSVALTRSGAVYTWG 4164
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K + +ATG S+ G+VY++G + L
Sbjct: 4165 KGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQL- 4223
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
G G HA +P+LV +L+ N V +++ W+
Sbjct: 4224 ------GDGTTHAQQ-SPRLVHALQGKNITRVACGSAHTLAWS 4259
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 154/320 (48%), Gaps = 29/320 (9%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
++Q A R + VY +G KD G G++G+K + P E L + +
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG----GLKGSK-IKLPVHSEVLSKLKPIH 2959
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ V+S+EG++Y G + RLG N EP P + L + ++A
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKP-IPFLSQYIIKKVAVHSGG 3018
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
ALA G V+S G G GKLGHG+R PRLIE + ++ +A G+ H+A
Sbjct: 3019 KHALALTQDG-KVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRD--IACGSGHSAA 3075
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGD 433
+ +G + TWG G YG LGHG+ PK+V AL + I VA G D T ++EDG
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
VYS+G G+ LG +DG +P V L + VVQ+ +
Sbjct: 3136 VYSWGDGDFGKLGRGG-SDG-------CYSPLPVDRLNGLG--VVQVECGAQF-----SL 3180
Query: 494 ALTESGKLYAFGAGDKGQLG 513
ALT+ G+++ +G GD +LG
Sbjct: 3181 ALTKYGEVWTWGKGDYFRLG 3200
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 164/341 (48%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGK 3019
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + + + P+L+E+LK+ + A G+ +A ++
Sbjct: 3020 HALALTQDGKVFSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIA 3077
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ L V+Q+A G +A G +
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTHLKPK-LVDALVGQRVIQVACGSRDAQTMALTEDG-S 3135
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P +++ L + V V GA + + + G V TWG
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGV--VQVECGAQFSLALTKYGEVWTWGK 3193
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G +
Sbjct: 3194 GDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3250
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
G G+ N P LV +L+ V ++SI W
Sbjct: 3251 ----QGNGSTMVN-RKPSLVHNLEDAKVNRVACGSSHSIAW 3286
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 22/324 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +PR I +L+ RI A G+G +
Sbjct: 3016 SGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAA 3075
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ G++Y +G +G +G T L P+LV++L V+Q A G + T L+ +
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTED 3133
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY++ G+ +LG P P + L + VVQ+ G + LAL V+
Sbjct: 3134 GSVYSWGDGDFGKLGRGGSDGCYSPLP-VDRLNGLGVVQVECGAQFSLALT---KYGEVW 3189
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P L+E + + V VA GA H V G+V WG
Sbjct: 3190 TWGKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDND 3247
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT--FVVSEDGDVYSFGCGESAS--- 444
+G G+G+ P +V L D K VA G + +V++ D + G E +
Sbjct: 3248 HGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLT---DQPTLGNQEPVTFPT 3304
Query: 445 ----LGHNAIADGQGNRHANVLTP 464
LG + Q NV+TP
Sbjct: 3305 AKDPLGQATLGFTQDKTETNVVTP 3328
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 42/299 (14%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V A+G FG + P +++ I V Q +LS G+VY
Sbjct: 434 EVLAWGNVHFGSG----------SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMY 483
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+G++ + P + G ++ VVQIA+ LA G+ VYS G G G
Sbjct: 484 YGSETQY----------PQSVYGFADD--VVQIASHPDGKHYLALTTKGI-VYSWGNGDG 530
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG P++IE L + +A G+ ++A + G + TWG G YG LGHG
Sbjct: 531 GRLGHGDSFSCDEPQVIEV--LSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHG 588
Query: 397 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+ S+P VV ALN HVA +GD T V+ G V+S+G G+ LG +DG
Sbjct: 589 ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGG-SDGS 647
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P++V L +++ VV++ + ALT G++Y +G GD +LG
Sbjct: 648 K-------LPKIVDKL--LDQNVVKVFCGGQF-----SAALTAHGEVYTWGKGDHYRLG 692
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG P P +L + +Q+A G L A+
Sbjct: 3888 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPC-ESLSALRPIQLAGGEQTLFAVTADG 3946
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3947 K---VYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVY 4003
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN PK+++AL + + +A G + + +S G +Y++G G
Sbjct: 4004 SWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYG 4063
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH +D Q L P +VT+L+ +V+ ++ + +A T +T+ +++
Sbjct: 4064 RLGHGD-SDDQ-------LKPTVVTALQ--GYKVIDVACGSG---DAQTLCVTDDDNVWS 4110
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4111 WGDGDYGKLG 4120
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 36/306 (11%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 266
+++S +G+VY S E +Y PQ V + VVQ A G + A L
Sbjct: 471 LILSLSGKVYMMYYGS--ETQY----------PQSVYGFAD-DVVQIASHPDGKHYLA-L 516
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G VY++ G+ RLGH + EP ++ L + V IA G Y A++ S
Sbjct: 517 TTKGIVYSWGNGDGGRLGHGDSFSCDEPQ-VIEVLSDRTVTYIACGSTYSAAIS---STG 572
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+ + G G G+LGHG D P ++ + V +G V G V +WG
Sbjct: 573 ELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWG 632
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LG G + +PK+V L D + V G + ++ G+VY++G G+ LG
Sbjct: 633 DGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLG 692
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H GN +V P+LV L+ N++V +S+ N H A+TE +Y +G
Sbjct: 693 H-------GNEE-HVRFPKLVEGLR--NKKVRDLSVG-----NLHILAITEDQLVYGWGR 737
Query: 507 GDKGQL 512
D Q+
Sbjct: 738 NDACQI 743
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 19/253 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T+KG+VYS+G+ G+LGHG + P+ I L + A G+ + IS
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST 571
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++ +G+ S+G +G+ ++ P +V +L V A G+ + L F
Sbjct: 572 GELLTWGRGSYGRLGHGICDD--ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVF 629
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+ +LG P ++ L + VV++ G + AL VY+ G
Sbjct: 630 SWGDGDYGKLGRGGSDGSKLPK-IVDKLLDQNVVKVFCGGQFSAALTAHGE---VYTWGK 685
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHG+ + P+L+E + N + ++ G H + +D V +GWGR
Sbjct: 686 GDHYRLGHGNEEHVRFPKLVEGLR--NKKVRDLSVGNLHILAITEDQLV--YGWGR---- 737
Query: 394 GHGNEECESVPKV 406
N+ C+ P +
Sbjct: 738 ---NDACQIDPSL 747
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E R + G +S A++S G + ++G S G+LGHG ++ P + +L G +
Sbjct: 548 EVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTV 607
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 256
A G+G +T+ ++++G V+++G +G+ G G+KL P++V+ L + VV+
Sbjct: 608 THVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKL---PKIVDKLLDQNVVKV 664
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G F+A L+ G VYT+ G+ RLGH E + P L+ L N V ++ G ++
Sbjct: 665 FCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPK-LVEGLRNKKVRDLSVGNLHI 723
Query: 317 LAL 319
LA+
Sbjct: 724 LAI 726
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG RP + L+G +++ A GA
Sbjct: 3171 QVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALH 3230
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV +L++ V + A G+
Sbjct: 3231 CLAVTDAGQVYAWGDNDHGQQGNG--STMVNRKPSLVHNLEDAKVNRVACGS 3280
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
E P V+IA C + C+ G+ + +G K + E F +
Sbjct: 2855 EYYPCVEIAIKQCRNGGIDCKIHGLQI------IGYK-----KVFENQLATSVSFLASDW 2903
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+ V A A+ V Q+ V WG LG +P + L+ +K IH+A G
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGG 2963
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
T FVVS++G +Y+ G G + LG G N NV P+ + L Q + V +
Sbjct: 2964 SKTLFVVSQEGKLYACGEGTNGRLGL-----GDNN---NVGEPKPIPFLSQYIIKKVAVH 3015
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
H ALT+ GK++++G G+ G+LG
Sbjct: 3016 SGGK-----HALALTQDGKVFSWGEGEDGKLG 3042
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G G+LG G ++ P+ + L +++ G +
Sbjct: 614 SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAA 673
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G+VY +GK +G + + V P+LVE L+N V ++GN ++ +
Sbjct: 674 LTAHGEVYTWGKGDHYRLGHGNE--EHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQL 731
Query: 272 VYTFSWG-NDA 281
VY WG NDA
Sbjct: 732 VY--GWGRNDA 740
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G S A+T+ G VY++G +LGHG E P+ + L+ ++ + G
Sbjct: 663 KVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLH 722
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ I++ VY +G++ + + + +V+ P L +L V+ G
Sbjct: 723 ILAITEDQLVYGWGRNDACQIDPSLGA--VVSEPTLCPTLSGKSVIGLVCG 771
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 174/357 (48%), Gaps = 33/357 (9%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P SL +R +Q G ++ G+VYA G
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3843
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 3844 GAVGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901
Query: 282 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 3902 KLGHGNRLSYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 3952
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG D+ P+LIE Q + V +G V D V +WG G YG LG G
Sbjct: 3953 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4012
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ +P +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4013 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4065
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V +L+ ++++ I+ T S+ H A T+ G+++ +G D+GQLG
Sbjct: 4066 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4114
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 150/301 (49%), Gaps = 29/301 (9%)
Query: 218 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
VY +G KD G G++G+K + P E L + V A G+ V+S+EG++Y
Sbjct: 2792 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2846
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
G + RLG + N EP P + L + ++A ALA G V+S G G
Sbjct: 2847 CGEGTNGRLGLGDDSNVCEPKP-IPFLSQYVIKKVAVHSGGKHALALTQDG-KVFSWGEG 2904
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG LG
Sbjct: 2905 EDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 2962
Query: 395 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
HG+ +S PK+VQ+L + I +A G D T ++ DG VYS+G G+ LG +D
Sbjct: 2963 HGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-SD 3021
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G TP L+ L + VVQI + ALT+ G+++ +G GD +L
Sbjct: 3022 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3067
Query: 513 G 513
G
Sbjct: 3068 G 3068
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2828 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGK 2887
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 2888 HALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 2945
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH +P L+ +L V+QIA G +A G+
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRVIQIACGSRDAQTMALTADGL- 3003
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3004 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3061
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G +
Sbjct: 3062 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQ--- 3118
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
G G N P LV L V ++SI W
Sbjct: 3119 ----QGNGTTIVNK-KPSLVHELDDARVNRVSCGSSHSIAW 3154
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 153/324 (47%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G VY+ G + G+LG G T+ P + S+Q + + + A +G
Sbjct: 3821 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 3880
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + + P+L+E L +V A G +A +
Sbjct: 3881 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAI 3938
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 3939 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LIEALQDYKVIDVACGSGDAQTL-CVTDDD 3996
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4054
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T +
Sbjct: 4115 DGTTSALQRPRLVHALQGKKITRV 4138
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 3878 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG +Y +GK +G +G +L +P+L+E+L++ V+ A G+ T ++ +
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 3995
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V+++ G + +AL SG A+Y
Sbjct: 3996 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVIKVECGSQFSVALT--RSG-AIY 4051
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4052 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4109
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4110 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4149
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 133/297 (44%), Gaps = 43/297 (14%)
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
SP +++ + + Q +LS G VY +G+ E + G
Sbjct: 451 SPVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGS-------------ETQRVYGF 497
Query: 301 LENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
E P+ IA+ + LAL S VYS G G G+LGHG+ T P+LIE
Sbjct: 498 SEK-PITMIASHSDGTHYLALTQDNS---VYSWGNGECGRLGHGNMTWYDEPKLIEALVE 553
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIH 417
N+ +A G+ ++A + +G + TWG G YG LGHGN + + +P +V ALN ++
Sbjct: 554 KNI--TFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVY 611
Query: 418 VATG---DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G D T V+ G V+S+G G LG DG TP++V L +N
Sbjct: 612 VACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGG-CDGSK-------TPKIVDKLLDIN 663
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
V + ALT G++Y +G G+ +LG N+ P+ +DI
Sbjct: 664 VAKVYCG-------QQFSAALTAYGEVYTWGKGEDYKLG---HGNEDHVRYPKIIDI 710
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 19/251 (7%)
Query: 265 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+LS +G + WG++ R LG E V+ L +L + VQ+ G L A+
Sbjct: 3777 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTAD 3835
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3836 GK---VYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH D LTP+L+ +L+ + +V+ ++ + +A T +T+ ++
Sbjct: 3953 GRLGHGDSEDQ--------LTPKLIEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 3999
Query: 503 AFGAGDKGQLG 513
++G GD G+LG
Sbjct: 4000 SWGDGDYGKLG 4010
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 12/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG P+ I +L I A G+ + +S
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRV 272
G++Y +G+ ++G+ +G K V P LV +L VV A G + T ++ G V
Sbjct: 573 GELYTWGRGNYGKLGHG-NSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIV 631
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 632 FSWGDGNHGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGQQFSAALTAYGE---VYTWG 687
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G KLGHG+ ++P++I+ + ++ + + G H + +D V +GWGR
Sbjct: 688 KGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLV--YGWGR 740
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 114/252 (45%), Gaps = 27/252 (10%)
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L+++ VY++ G RLGH EP L+ L + IA G Y AL+ S
Sbjct: 517 LTQDNSVYSWGNGECGRLGHGNMTWYDEPK-LIEALVEKNITFIACGSTYSAALS---SN 572
Query: 326 MAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV-VAAGAW---HAAVVGQDG 380
+Y+ G G GKLGHG S D P L+ LN VV VA G V G
Sbjct: 573 GELYTWGRGNYGKLGHGNSDKDVMIPTLVTA---LNGHMVVYVACGGGRDPQTLCVTASG 629
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V +WG G +G LG G + PK+V L D+ V G + ++ G+VY++G G
Sbjct: 630 IVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKG 689
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
E LGH GN +V P+++ LK + + I + H ALTE
Sbjct: 690 EDYKLGH-------GNED-HVRYPKIIDILKTKKIKDLYIG-------HLHVLALTEDQL 734
Query: 501 LYAFGAGDKGQL 512
+Y +G D GQ+
Sbjct: 735 VYGWGRNDHGQI 746
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 23/295 (7%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIR 198
EA + + G +S A++S G +Y++G + G+LGHG ++++ P + +L G
Sbjct: 549 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHM 608
Query: 199 IIQAAAGAGR---TMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVV 254
++ A G GR T+ ++ +G V+++G + G+ G G+K +P++V+ L +I V
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSK---TPKIVDKLLDINVA 665
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ G F+A L+ G VYT+ G D +LGH E + P ++ L+ + + G+
Sbjct: 666 KVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPK-IIDILKTKKIKDLYIGHL 724
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL--------QPVVV 366
++LAL VY G G++ T P L F N+ Q
Sbjct: 725 HVLALT---EDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAW 781
Query: 367 AAGAWHAA-VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
AW A V +C + L N+ CE +P D + + VAT
Sbjct: 782 CTAAWSVANRVAFVVDICEETFRLLDTL--LNKACEGLPSTRPPTQDRECLAVAT 834
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G +II A GA
Sbjct: 3039 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALH 3098
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3099 CLAVTDIGQVYAWGDNDHGQQGNGT--TIVNKKPSLVHELDDARVNRVSCGS 3148
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG LG +P + L+ +K +H+A G T FVVS++G +Y+
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + LG + D +NV P+ + L Q + V + H ALT+
Sbjct: 2848 GEGTNGRLG---LGDD-----SNVCEPKPIPFLSQYVIKKVAVHSGGK-----HALALTQ 2894
Query: 498 SGKLYAFGAGDKGQLG 513
GK++++G G+ G+LG
Sbjct: 2895 DGKVFSWGEGEDGKLG 2910
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 189/392 (48%), Gaps = 33/392 (8%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR AG H++A+ S +V S+G GQLGHG EE P I +L I
Sbjct: 13 RRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSIT 72
Query: 204 AGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
GA T S++ + VY++G FG +G + P+ ++ LK + + Q A G+
Sbjct: 73 CGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFI--PRAIKGLKGLEIKQIACGDSH 130
Query: 263 TAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
++ +G V+++ + +LG HTE DV + E I V +AAG + A+
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTE--DVLVPNKVAAFEGIAVKMLAAGAEHTAAVT- 187
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQD 379
SG +Y G G G LG G R D P + + +NL VA G H V
Sbjct: 188 -ESGK-LYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL----VACGWRHTIAVANS 241
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G + T+GW +YG LGHG+ E VP VQAL + V+ G T + EDG++Y +G
Sbjct: 242 GNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGW 301
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ +G D +P+L+T + VNE+V +++ W HT A+T+ G
Sbjct: 302 NKFGQVGCGNTDDHN--------SPKLITGI--VNEKVTRVTCG----WR-HTVAITDRG 346
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+Y++G G GQLG + +R P+R+++
Sbjct: 347 NVYSWGRGTSGQLGH---GDAVDRCVPKRIEL 375
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 8/266 (3%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G H +A+T G V+S+G N +GQLG G TE+ P + + +GI + AAG
Sbjct: 120 EIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAG 179
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
A T ++++G++Y +G +G G + +LV P V ++ + A G T
Sbjct: 180 AEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLV--PGEVAAVPGEKMNLVACGWRHTIA 237
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ G +YTF W +LGH + + PH + L+N + ++ G+ + +AL
Sbjct: 238 VANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVAL---DED 293
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+Y G G++G G+ D P+LI ++N + V G H + G V +W
Sbjct: 294 GELYGWGWNKFGQVGCGNTDDHNSPKLIT--GIVNEKVTRVTCGWRHTVAITDRGNVYSW 351
Query: 386 GWGRYGCLGHGNEECESVPKVVQALN 411
G G G LGHG+ VPK ++ L+
Sbjct: 352 GRGTSGQLGHGDAVDRCVPKRIELLS 377
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 33/357 (9%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P SL +R +Q G + ++ G+VYA G
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 4319 GAAGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376
Query: 282 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 4377 KLGHGNRLMYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4427
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG D+ P+L+E Q + V +G V D V +WG G YG LG G
Sbjct: 4428 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4487
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ +P +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4488 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4540
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V +L+ ++++ I+ T S+ H A T+ G+++ +G D+GQLG
Sbjct: 4541 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 154/324 (47%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G +AVT+ G VY+ G ++G+LG G T+ P + S+Q + + + A +G
Sbjct: 4296 QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4355
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + P+L+E L +V A G +A +
Sbjct: 4356 KHCLALSSEGHVYSWGEGDDGKLGHG--NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4413
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4414 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4471
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 4472 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4529
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T +
Sbjct: 4590 DGTTSALQRPRLVHALQGKKITRV 4613
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 29/301 (9%)
Query: 218 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
VY +G KD G G++G+K + P E L + + A G+ V+S+EG++Y
Sbjct: 3256 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3310
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
G + RLG + N EP L+ L + ++A ALA G ++S G G
Sbjct: 3311 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKVAVHSGGKHALALTQDG-KIFSWGEG 3368
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG LG
Sbjct: 3369 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3426
Query: 395 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
HG+ + PK+VQ+L + I VA G D T ++ DG VYS+G G+ LG +D
Sbjct: 3427 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3485
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G TP L+ L + VVQI + ALT+ G+++ +G GD +L
Sbjct: 3486 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3531
Query: 513 G 513
G
Sbjct: 3532 G 3532
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY +G N QLG + P L ++ I A G+ ++S G++YA G+ +
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3315
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ V P+L+ L + + A+ G L+++G+++++ G D +L
Sbjct: 3316 NGR--LGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKL 3373
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + +P L+ +L++ + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3374 GHGNSVSLDKPR-LIESLKSKRIRDIACGSGHSAAIT---SSGELYTWGLGEYGRLGHGD 3429
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 401
+ P+L++ L+ + + VA G+ A + DG V +WG G +G LG G +
Sbjct: 3430 TATQMKPKLVQS--LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGC 3487
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P ++ LN + + + G + +++ G+V+++G G+ LGH GN H +V
Sbjct: 3488 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HV 3539
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P LV L+ ++VV +++ H A+T++G++YA+G D GQ G
Sbjct: 3540 RKPTLVEGLR--GKKVVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3584
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG ++ V S+ G +Y+ G ++G+LG G P+ P S I+ + +G
Sbjct: 3292 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGK 3351
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+++++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 3352 HALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3409
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ +L V+Q+A G +A G +
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3467
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3468 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3525
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3526 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3585
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ + P LV L V ++SI W
Sbjct: 3586 GSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3618
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 4353 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4412
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ AG +Y +GK +G +G +L +P+LVE+L++ V+ A G + T ++ +
Sbjct: 4413 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4470
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V+++ G + +AL SG A+Y
Sbjct: 4471 DNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIY 4526
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4527 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4584
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4585 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4624
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 123/254 (48%), Gaps = 37/254 (14%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY--CYLLALACQ 322
+LS G VY +G++ + P + G E PV IA+ + LAL
Sbjct: 467 ILSISGNVYMMYYGSETQY----------PQRVYGFSEK-PVTMIASHSDGTHYLALTQD 515
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S VYS G G GG+LGHG R P+L+E L++ +A G+ ++AV+ +G +
Sbjct: 516 SS---VYSWGNGDGGRLGHGDRVWYDEPKLVEA--LVDKNITFIACGSTYSAVLSSNGEL 570
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCG 440
TWG G YG LGHGN + +P +V ALN ++VA +GD T V+ G V+S+G G
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESG 499
LG DG TP++V L +N +Y + ALT G
Sbjct: 631 NYGKLGRGG-CDGSK-------TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYG 674
Query: 500 KLYAFGAGDKGQLG 513
++Y +G G+ +LG
Sbjct: 675 EVYTWGKGEGYRLG 688
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG E V+ L +L + VQ+ G LLA+
Sbjct: 4253 LSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4311
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4312 K---VYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4368
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 4369 SWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4428
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D LTP+LV +L+ + +V+ ++ + +A T +T+ +++
Sbjct: 4429 RLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4475
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4476 WGDGDYGKLG 4485
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLS 267
M++S +G VY S E +Y PQ V S K + ++ + L+
Sbjct: 466 MILSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALT 513
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
++ VY++ G+ RLGH EP L+ L + + IA G Y L+ S
Sbjct: 514 QDSSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGE 569
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+Y+ G G G+LGHG+ + P L+ + V +G V G V +WG
Sbjct: 570 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGD 629
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LG G + PK+V L D+ V G + ++ G+VY++G GE LGH
Sbjct: 630 GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 689
Query: 448 NAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GN ++ P+++ L K+V E V N H ALTE +Y +G
Sbjct: 690 -------GNEE-HIRYPKVIEVLKPKKVKELCVG---------NFHVLALTEDQLVYGWG 732
Query: 506 AGDKGQL 512
D GQ+
Sbjct: 733 RNDYGQI 739
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG P+ + +L I A G+ + ++S
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 567
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G L+ P LV +L VV A G+ + L F
Sbjct: 568 GELYTWGRGNYGRLGHGNSDNVLI--PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 625
Query: 276 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SW GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 626 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 681
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G +LGHG+ ++P++IE + ++ + V G +H + +D V WG YG
Sbjct: 682 GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCV--GNFHVLALTEDQLVYGWGRNDYG 737
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 95/170 (55%), Gaps = 7/170 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S ++S G +Y++G + G+LGHG ++ P + +L G ++ A G+G +T+
Sbjct: 557 GSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTL 616
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++ +G V+++G ++G+ G G+K +P++V+ L +I V + G F+A L+
Sbjct: 617 CVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 673
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G VYT+ G RLGH E + P ++ L+ V ++ G ++LAL
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPK-VIEVLKPKKVKELCVGNFHVLAL 722
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG LG +P + L+ +K IH+A G T FVVS++G +Y+
Sbjct: 3252 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3311
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + LG + D +NV P+L+ L Q + V + H ALT+
Sbjct: 3312 GEGTNGRLG---LGD-----DSNVCEPKLIPFLSQYMIKKVAVHSGGK-----HALALTQ 3358
Query: 498 SGKLYAFGAGDKGQLG 513
GK++++G G+ G+LG
Sbjct: 3359 DGKIFSWGEGEDGKLG 3374
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G +++ A GA
Sbjct: 3503 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALH 3562
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3563 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3612
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G + G+LG G + P+ + L I + + G +
Sbjct: 610 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 669
Query: 212 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+VY +GK GE G + + P+++E LK V + +GNF L+ +
Sbjct: 670 LTAYGEVYTWGK---GEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQ 726
Query: 271 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VY WG ND + P LGT+ P + ++ LAC
Sbjct: 727 LVY--GWGR----------NDYGQIDPALGTIVPEPTLCPTLSGKNIIGLAC 766
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ G S A+T+ G VY++G +LGHG E P+ I L+ ++ + G
Sbjct: 658 AKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNF 717
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFF 262
+ +++ VY +G++ +G+ + + GT +V P L +L KNI + + F
Sbjct: 718 HVLALTEDQLVYGWGRNDYGQIDPAL-GT-IVPEPTLCPTLSGKNIIGLACGLTQSF 772
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 187/372 (50%), Gaps = 29/372 (7%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
T G VY++G G+LGHG ++ PR SL G I G+ T +S G ++
Sbjct: 23 THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G +G+ +G + ++P+ V+SL + VV A G+ TA+++ G +YT+ +
Sbjct: 83 WGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140
Query: 281 ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAA-GYCYLLALACQPSGMAVYSVGCGLGGK 338
GH TE + P LL L VVQ++A G+ C VY+ G G G+
Sbjct: 141 GVAGHGDTEGHQYTP-KLLERLSGKRVVQLSACGF----HTGCLTDAGEVYTWGEGKFGR 195
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
LGHG+ + PRL+E LL +PV ++ G +H+AVV DG++ T+G G +G LGHG++
Sbjct: 196 LGHGAERNCHSPRLVET--LLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK 253
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P +V+ L+ V + G + ++ +VY++G G+ LGH G G +
Sbjct: 254 VNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH-----GCGKK- 307
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA---FGAGDKGQLGIE 515
V TPQLV L V ++VV ++ +N HT L E + A G Q+G
Sbjct: 308 --VSTPQLVEKL--VGQKVVCVA-----SYNEHTACLVEPHSVNASRRHAPGTMVQIGAG 358
Query: 516 LVNNQTERGNPE 527
+++ E N E
Sbjct: 359 YLHDMKELVNDE 370
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 149/305 (48%), Gaps = 16/305 (5%)
Query: 129 WKLVLRFL--LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 186
WK V R LAG+ + G H+ AV+SKG ++++G G+LGHG
Sbjct: 46 WKYVPRLTHSLAGQVI-----THVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHS 100
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 245
P+ + SL G+ ++ A G+ T +++ G +Y +G G A +G +G + +P+L+
Sbjct: 101 TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQY--TPKLL 158
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
E L VVQ + F T L+ G VYT+ G RLGH E N P L+ TL
Sbjct: 159 ERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPR-LVETLLGKR 217
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
VQI+ G A + +Y+ G G G+LGHG + ++ P L++ + L +
Sbjct: 218 PVQISCGG---FHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQIT 274
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
G H+ + V TWG G +G LGHG + S P++V+ L K + VA+ + T
Sbjct: 275 --CGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHT 332
Query: 426 FVVSE 430
+ E
Sbjct: 333 ACLVE 337
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS VT+ G +Y+FG GQLGHG + +P ++ L G+ + Q G
Sbjct: 220 QISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSH 279
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ ++ + +VY +G G+ +G K V++PQLVE L VV A N TA L
Sbjct: 280 SVALTSSHEVYTWGNGDHGKLGHGC--GKKVSTPQLVEKLVGQKVVCVASYNEHTACL-- 335
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGY 313
VEPH + + + P +VQI AGY
Sbjct: 336 -----------------------VEPHSVNASRRHAPGTMVQIGAGY 359
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 177/363 (48%), Gaps = 23/363 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S VV SFG GQLGHG E+ PR I +L I A GA T
Sbjct: 12 AGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTA 71
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +Y++G FG +G V P +++L+ + + Q A G+ ++ +G
Sbjct: 72 YSATRLTIYSWGWGDFGRLGHGNSSDLFV--PHPIKALQGLEIRQIACGDSHCLAVTADG 129
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VY++ + +LG + + PH LL E + V +AAG + A+ SG +Y
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVT--DSG-KLYG 185
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P E + + + +VA G H V Q G++ T+GW +Y
Sbjct: 186 WGWGRYGNLGLGDRGDRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ +P V AL + V+ G T ++E G +Y +G + +G +
Sbjct: 244 GQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDV 303
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D H +PQL+ S+ ++RVVQ+S W HT A+T+ +Y++G G G
Sbjct: 304 DD-----HT---SPQLI-SIPGQHQRVVQVSCG----WR-HTVAVTDKNNVYSWGRGTSG 349
Query: 511 QLG 513
QLG
Sbjct: 350 QLG 352
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 169/335 (50%), Gaps = 27/335 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA T+ + V +FG+ G+ +G +L+ P+++ +L + + A
Sbjct: 6 KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLL--PRIIGALNDCEISLVA 63
Query: 258 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G + TA + +Y++ WG+ RLGH + PHP+ L+ + + QIA G +
Sbjct: 64 CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ VYS G G+LG G D P + F+ ++++ ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G++ WGWGRYG LG G+ +P V A+ D K VA G T VS+ G +Y+
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH AD L P V +L + N + Q+S W HT ALT
Sbjct: 238 YGWSKYGQLGHGDYAD--------HLLPHQVAALAEFN--ITQVSGG----WR-HTVALT 282
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
E+GKLY +G GQ+G V++ T +P+ + I
Sbjct: 283 EAGKLYGWGWNKFGQVGSGDVDDHT---SPQLISI 314
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 13/269 (4%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G H +AVT+ G VYS+G N +GQLG G T++ P + + +G+ + AAG
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAG 170
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
A T ++D+G++Y +G +G G +G +++ P V ++ + + A G T
Sbjct: 171 AEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAVGDEKMCMVACGWRHTIA 228
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+S+ G++YT+ W +LGH + + PH + L + Q++ G+ + +AL
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLPHQ-VAALAEFNITQVSGGWRHTVALT---EA 284
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+Y G G++G G D P+LI Q Q + V V+ G H V V
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRV----VQVSCGWRHTVAVTDKNNV 340
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALN 411
+WG G G LGHG+ S PK +QAL+
Sbjct: 341 YSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 19/328 (5%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRP 188
+L+ R + A C E S G H+ A + ++ +YS+G G+LGHG + + + P
Sbjct: 45 RLLPRIIGALNDC---EISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVP 101
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
PI++LQG+ I Q A G + ++ G+VY++G++ G+ G LV P + +
Sbjct: 102 HPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLAF 159
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPV 306
+ + V A G TA ++ G++Y + WG LG + + P P +G + +
Sbjct: 160 EGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEKM 216
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
+A G+ + +A++ SG +Y+ G G+LGHG D P + N+ V
Sbjct: 217 CMVACGWRHTIAVS--QSG-KLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV-- 271
Query: 367 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYT 424
+G W H + + G++ WGW ++G +G G+ + + P+++ + + V+ G
Sbjct: 272 -SGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRH 330
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIAD 452
T V++ +VYS+G G S LGH D
Sbjct: 331 TVAVTDKNNVYSWGRGTSGQLGHGDAVD 358
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 33/357 (9%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P SL +R +Q G + ++ G+VYA G
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 4352 GAAGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409
Query: 282 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 4410 KLGHGNRLMYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4460
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG D+ P+L+E Q + V +G V D V +WG G YG LG G
Sbjct: 4461 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4520
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ +P +++L + I V G + ++ G +Y++G G+ LGH
Sbjct: 4521 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4573
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V +L+ ++++ I+ T S+ H A T+ G+++ +G D+GQLG
Sbjct: 4574 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4622
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 154/324 (47%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G +AVT+ G VY+ G ++G+LG G T+ P + S+Q + + + A +G
Sbjct: 4329 QLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4388
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + P+L+E L +V A G +A +
Sbjct: 4389 KHCLALSSEGHVYSWGEGDDGKLGHG--NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4446
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4447 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4504
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVIKVECGSQFSVALTRSGAIYTWG 4562
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T +
Sbjct: 4623 DGTTSALQRPRLVHALQGKKITRV 4646
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 29/301 (9%)
Query: 218 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
VY +G KD G G++G+K + P E L + + A G+ V+S+EG++Y
Sbjct: 3261 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3315
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
G + RLG + N EP L+ L + ++A ALA G ++S G G
Sbjct: 3316 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKMAVHSGGKHALALTQDG-KIFSWGEG 3373
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG LG
Sbjct: 3374 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3431
Query: 395 HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
HG+ + PK+VQ+L + I VA G D T ++ DG VYS+G G+ LG +D
Sbjct: 3432 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3490
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G TP L+ L + VVQI + ALT+ G+++ +G GD +L
Sbjct: 3491 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3536
Query: 513 G 513
G
Sbjct: 3537 G 3537
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY +G N QLG + P L ++ I A G+ ++S G++YA G+ +
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3320
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ V P+L+ L + + A+ G L+++G+++++ G D +L
Sbjct: 3321 NGR--LGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKL 3378
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + +P L+ +L++ + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3379 GHGNSVSLDKPR-LIESLKSKRIRDIACGSGHSAAIT---SSGELYTWGLGEYGRLGHGD 3434
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 401
+ P+L++ L+ + + VA G+ A + DG V +WG G +G LG G +
Sbjct: 3435 TATQMKPKLVQS--LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGC 3492
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P ++ LN + + + G + +++ G+V+++G G+ LGH GN H +V
Sbjct: 3493 YTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HV 3544
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P LV L+ ++VV +++ H A+T++G++YA+G D GQ G
Sbjct: 3545 RKPTLVEGLR--GKKVVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3589
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG ++ V S+ G +Y+ G ++G+LG G P+ P S I+ + +G
Sbjct: 3297 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGK 3356
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+++++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 3357 HALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3414
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ +L V+Q+A G +A G +
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3472
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3473 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3530
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K +HVA G V++ G VY++G + G+
Sbjct: 3531 GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3590
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ + P LV L V ++SI W
Sbjct: 3591 GSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3623
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 4386 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAA 4445
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ AG +Y +GK +G +G +L +P+LVE+L++ V+ A G + T ++ +
Sbjct: 4446 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4503
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V+++ G + +AL SG A+Y
Sbjct: 4504 DNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIY 4559
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4560 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4617
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4618 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4657
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 37/254 (14%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY--CYLLALACQ 322
+LS G VY +G++ + P + G E PV IA+ + LAL
Sbjct: 475 ILSISGNVYMMYYGSETQY----------PQRVYGFSEK-PVTMIASHSDGTHYLALTQD 523
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S VYS G G GG+LGHG R P+L+E L++ +A G+ ++AV+ +G +
Sbjct: 524 SS---VYSWGNGDGGRLGHGDRVWYDEPKLVEA--LVDKNITFIACGSTYSAVLSSNGEL 578
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCG 440
TWG G YG LGHGN + +P +V ALN +HVA +GD T V+ G V+S+G G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESG 499
LG DG TP++V L +N +Y + ALT G
Sbjct: 639 NYGKLGRGG-CDGSK-------TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYG 682
Query: 500 KLYAFGAGDKGQLG 513
++Y +G G+ +LG
Sbjct: 683 EVYTWGKGEGYRLG 696
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG E V+ L +L + VQ+ G LLA+
Sbjct: 4286 LSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4344
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4345 K---VYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4401
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 4402 SWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4461
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D LTP+LV +L+ + +V+ ++ + +A T +T+ +++
Sbjct: 4462 RLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4508
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4509 WGDGDYGKLG 4518
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLS 267
M++S +G VY S E +Y PQ V S K + ++ + L+
Sbjct: 474 MILSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALT 521
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
++ VY++ G+ RLGH EP L+ L + + IA G Y L+ S
Sbjct: 522 QDSSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGE 577
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+Y+ G G G+LGHG+ + P L+ + V +G V G V +WG
Sbjct: 578 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGD 637
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LG G + PK+V L D+ V G + ++ G+VY++G GE LGH
Sbjct: 638 GNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 697
Query: 448 NAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GN ++ P+++ L K+V E V N H ALTE +Y +G
Sbjct: 698 -------GNEE-HIRYPKVIEVLXTKKVKELCVG---------NFHVLALTEDQLVYGWG 740
Query: 506 AGDKGQL 512
D GQ+
Sbjct: 741 RNDYGQI 747
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 10/238 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG P+ + +L I A G+ + ++S
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 575
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G L+ P LV +L VV A G+ + L F
Sbjct: 576 GELYTWGRGNYGRLGHGNSDNVLI--PTLVTALNGHMVVHVACGSGDSQTLCVTASGIVF 633
Query: 276 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SW GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 689
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G +LGHG+ ++P++IE ++ + V G +H + +D V WG YG
Sbjct: 690 GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCV--GNFHVLALTEDQLVYGWGRNDYG 745
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S ++S G +Y++G + G+LGHG ++ P + +L G ++ A G+G +T+
Sbjct: 565 GSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTL 624
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++ +G V+++G ++G+ G G+K +P++V+ L +I V + G F+A L+
Sbjct: 625 CVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 681
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G VYT+ G RLGH E + P ++ L V ++ G ++LAL
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPK-VIEVLXTKKVKELCVGNFHVLAL 730
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG LG +P + L+ +K IH+A G T FVVS++G +Y+
Sbjct: 3257 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3316
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + LG + D +NV P+L+ L Q + + + H ALT+
Sbjct: 3317 GEGTNGRLG---LGD-----DSNVCEPKLIPFLSQYMIKKMAVHSGGK-----HALALTQ 3363
Query: 498 SGKLYAFGAGDKGQLG 513
GK++++G G+ G+LG
Sbjct: 3364 DGKIFSWGEGEDGKLG 3379
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G +++ A GA
Sbjct: 3508 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALH 3567
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3568 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3617
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G + G+LG G + P+ + L I + + G +
Sbjct: 618 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 677
Query: 212 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+VY +GK GE G + + P+++E L V + +GNF L+ +
Sbjct: 678 LTAYGEVYTWGK---GEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQ 734
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQIAAG 312
VY WG + V P P L TL ++ +A G
Sbjct: 735 LVY--GWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACG 775
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ G S A+T+ G VY++G +LGHG E P+ I L ++ + G
Sbjct: 666 AKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNF 725
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ +++ VY +G++ +G+ + + GT +V P L +L ++ A G
Sbjct: 726 HVLALTEDQLVYGWGRNDYGQIDPAL-GT-VVPEPTLCPTLSGKNIIGLACG 775
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 174/357 (48%), Gaps = 33/357 (9%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P SL +R +Q G ++ G+VYA G
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 4012
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 4013 GAVGR--LGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070
Query: 282 RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+LGH + P +E LLGT +V IA G + A+ S +Y+ G G
Sbjct: 4071 KLGHGNRLSYDRPKLIEE--LLGT----EIVDIACGGHHSAAIT---SAGWLYTWGKGRY 4121
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG D+ P+LIE Q + V +G V D V +WG G YG LG G
Sbjct: 4122 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4181
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ +P +++L + + V G + ++ G +Y++G G+ LGH
Sbjct: 4182 GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT------- 4234
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V +L+ ++++ I+ T S+ H A T+ G+++ +G D+GQLG
Sbjct: 4235 -DDHVRRPRKVAALQ--GKKIISIA-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4283
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 151/302 (50%), Gaps = 31/302 (10%)
Query: 218 VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
VY +G KD G G++G+K + P E L + V A G+ V+S+EG++Y
Sbjct: 2936 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2990
Query: 275 FSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
G + RLG + N EP P+ + I V + +G + LAL V+S G
Sbjct: 2991 CGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALT---QDGKVFSWGE 3047
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G GKLGHG+ PRLIE + ++ +A G+ H+A + G + TWG G YG L
Sbjct: 3048 GEDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRL 3105
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
GHG+ +S PK+VQ+L + I +A G D T ++ DG VYS+G G+ LG +
Sbjct: 3106 GHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-S 3164
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
DG TP L+ L + VVQI + ALT+ G+++ +G GD +
Sbjct: 3165 DG-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFR 3210
Query: 512 LG 513
LG
Sbjct: 3211 LG 3212
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2972 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGK 3031
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + + P+L+ESLK+ + A G+ +A ++
Sbjct: 3032 HALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 3089
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH +P L+ +L ++QIA G +A G+
Sbjct: 3090 SSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRIIQIACGSRDAQTMALTADGL- 3147
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P LI++ L + V + GA + + + G V TWG
Sbjct: 3148 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3205
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G +
Sbjct: 3206 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQ--- 3262
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
G G N P LV L V ++SI W
Sbjct: 3263 ----QGNGTTIVNK-KPSLVHELDDARVNRVSCGSSHSIAW 3298
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G VY+ G + G+LG G T+ P + S+Q + + + A +G
Sbjct: 3990 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGG 4049
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + + P+L+E L +V A G +A +
Sbjct: 4050 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAI 4107
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4108 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LIEALQDYKVIDVACGSGDAQTL-CVTDDD 4165
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L V V G+ + + + G + TWG
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVVKVECGSQFSVALTRSGAIYTWG 4223
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG ++ G+V+++G + LG
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T +
Sbjct: 4284 DGTTSALQRPRLVHALQGKKITRV 4307
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 4047 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG +Y +GK +G +G +L +P+L+E+L++ V+ A G+ T ++ +
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDD 4164
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + VV++ G + +AL SG A+Y
Sbjct: 4165 DNVWSWGDGDYGKLGRGGSDGCKIPMK-IESLAGLGVVKVECGSQFSVALT--RSG-AIY 4220
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4221 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDND 4278
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4279 EGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4318
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 40/297 (13%)
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
+SP +++ + + Q +LS G VY +G++ + P + G
Sbjct: 450 SSPFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYGSETQY----------PQRVYG 499
Query: 300 TLENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
E P++ IA+ + LAL S VYS G G GG+LGHG R P+LIE
Sbjct: 500 FSEK-PIIMIASHSDGTHYLALTQDNS---VYSWGNGDGGRLGHGDRAWYDEPKLIEALV 555
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
N+ +A G+ ++A + +G + TWG G YG LGHGN + +P +V ALN ++
Sbjct: 556 EKNI--TFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVY 613
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA +GD T V+ G V+S+G G LG DG TP++V L +N
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGG-CDGSK-------TPKIVDKLLDIN- 664
Query: 476 RVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+Y + ALT G++Y +G G+ +LG N+ P+ +DI
Sbjct: 665 -------VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG---HGNEDHVRYPKIIDI 711
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 40/342 (11%)
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
S +LG+G++ P ++ + I Q M++S G VY S E +Y
Sbjct: 443 SVKLGNGSS-----PFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYGS--ETQY-- 493
Query: 234 QGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
PQ V I + + G + A L+++ VY++ G+ RLGH
Sbjct: 494 --------PQRVYGFSEKPIIMIASHSDGTHYLA-LTQDNSVYSWGNGDGGRLGHGDRAW 544
Query: 291 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
EP L+ L + IA G Y AL+ S +Y+ G G G+LGHG+ + P
Sbjct: 545 YDEPK-LIEALVEKNITFIACGSTYSAALS---SNGELYTWGRGNYGRLGHGNSDNVMIP 600
Query: 351 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
L+ + V +G V G V +WG G YG LG G + PK+V L
Sbjct: 601 TLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKL 660
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
D+ V G + ++ G+VY++G GE+ LGH GN +V P+++ L
Sbjct: 661 LDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGH-------GNED-HVRYPKIIDIL 712
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
K ++V ++ + N H ALTE +Y +G D GQ+
Sbjct: 713 K--TKKVKELCVG-----NLHVLALTEDQLIYGWGRNDYGQI 747
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 19/251 (7%)
Query: 265 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+LS +G + WG++ R LG E V+ L +L + VQ+ G L A+
Sbjct: 3946 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTAD 4004
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4005 GK---VYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WG G G LGHGN PK+++ L + + +A G + + ++ G +Y++G G
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH D LTP+L+ +L+ + +V+ ++ + +A T +T+ ++
Sbjct: 4122 GRLGHGDSEDQ--------LTPKLIEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4168
Query: 503 AFGAGDKGQLG 513
++G GD G+LG
Sbjct: 4169 SWGDGDYGKLG 4179
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG P+ I +L I A G+ + +S
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G ++ P LV +L VV A G+ + L F
Sbjct: 576 GELYTWGRGNYGRLGHGNSDNVMI--PTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633
Query: 276 SW--GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SW GN +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 689
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHG+ ++P++I+ + ++ + V G H + +D + WG YG +
Sbjct: 690 GEAYRLGHGNEDHVRYPKIIDILKTKKVKELCV--GNLHVLALTEDQLIYGWGRNDYGQI 747
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
P + L+ I +A G +F
Sbjct: 748 DPALGTVVPEPTLCPTLSGKNVIGLACGPTQSF 780
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA + + G +S A++S G +Y++G + G+LGHG ++ P + +L G +
Sbjct: 552 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMV 611
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+ A G+G +T+ ++ +G V+++G ++G+ G G+K +P++V+ L +I V +
Sbjct: 612 VYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSK---TPKIVDKLLDINVAKV 668
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G F+A L+ G VYT+ G RLGH E + P ++ L+ V ++ G ++
Sbjct: 669 YCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPK-IIDILKTKKVKELCVGNLHV 727
Query: 317 LALA 320
LAL
Sbjct: 728 LALT 731
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G ++I A GA
Sbjct: 3183 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALH 3242
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3243 CLAVTDIGQVYAWGDNDHGQQGNGT--TIVNKKPSLVHELDDARVNRVSCGS 3292
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG LG +P + L+ +K +H+A G T FVVS++G +Y+
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2991
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + LG + D +NV P+ + L Q + V + H ALT+
Sbjct: 2992 GEGTNGRLG---LGDD-----SNVCEPKPIPFLSQYVIKKVSVHSGGK-----HALALTQ 3038
Query: 498 SGKLYAFGAGDKGQLG 513
GK++++G G+ G+LG
Sbjct: 3039 DGKVFSWGEGEDGKLG 3054
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ G S A+T+ G VY++G + +LGHG + P+ I L+ ++ + G
Sbjct: 666 AKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNL 725
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ +++ +Y +G++ +G+ + + GT +V P L +L V+ A G
Sbjct: 726 HVLALTEDQLIYGWGRNDYGQIDPAL-GT-VVPEPTLCPTLSGKNVIGLACG 775
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P SL +R +Q G ++ G+VYA G
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G+ GT V P L+ES++++FV + A+ G LS EG VY++ G+D
Sbjct: 3956 GAVGR--LGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + P L+ L +V +A G + A+ S +Y+ G G G+LGH
Sbjct: 4014 KLGHGNRLSYDRPK-LIEELLGTEIVDVACGGHHSAAIT---SAGWLYTWGKGRYGRLGH 4069
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E Q + V +G V D V +WG G YG LG G +
Sbjct: 4070 GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4129
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP +++L + I V G + ++ G +Y++G G+ LGH +V
Sbjct: 4130 KVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGT--------DDHV 4181
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 4182 RRPRKVAALQ--GKKIISIA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4226
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG ++ V S+ G +Y+ G ++G+LG G P+PI L I+ + +G
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK 3006
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + P+L+ESLK+ + A G+ +A ++
Sbjct: 3007 HALALTQDGRVFSWGEGEDGKLGHG--NCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ +L V+Q+A G +A G +
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPK-LVQSLVGQRVIQVACGSRDAQTMALTADG-S 3122
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P L+++ L + V + GA + + + G V TWG
Sbjct: 3123 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQIECGAQFSLALTKYGEVWTWGK 3180
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G + G+
Sbjct: 3181 GDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3240
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ + P LV L V ++SI W
Sbjct: 3241 GSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3273
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 152/324 (46%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT+ G VY+ G + G+LG G T+ P + S+Q + + + A +G
Sbjct: 3933 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGG 3992
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G VY++G+ G+ +G + + P+L+E L +V A G +A +
Sbjct: 3993 KHCLALSSEGHVYSWGEGDDGKLGHGNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAI 4050
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P L+ L++ V+ +A G L C
Sbjct: 4051 TSAGWLYTWGKGRYGRLGHGDSEDQLTPK-LVEALQDYKVIDVACGSGDAQTL-CVTDDD 4108
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G + TWG
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLAGLGVIKVECGSQFSVALTRSGSIYTWG 4166
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ P+ V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
Q R + L + +T +
Sbjct: 4227 DGTTCALQRPRLVHALQGKKITRV 4250
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 178/369 (48%), Gaps = 34/369 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ + P HS VY +G N QLG + P SL ++ + A G+
Sbjct: 2901 RGVETPQHS-------AVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKT 2953
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVL 266
++S G++YA G+ + G G G P+ + L + + A+ G L
Sbjct: 2954 LFVVSQEGKLYACGEGTNGRLGLGDDGN--ACEPKPIPFLSQYVIKKVAVHSGGKHALAL 3011
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+++GRV+++ G D +LGH + +P L+ +L++ + +A G + A+ S
Sbjct: 3012 TQDGRVFSWGEGEDGKLGHGNCSSLDKPR-LIESLKSKRIRDVACGSGHSAAIT---SSG 3067
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCT 384
+Y+ G G G+LGHG + P+L++ L+ + + VA G+ A + DG V +
Sbjct: 3068 ELYTWGLGEYGRLGHGDTNTQLKPKLVQ--SLVGQRVIQVACGSRDAQTMALTADGSVYS 3125
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G +G LG G + P +V LN + + + G + +++ G+V+++G G+
Sbjct: 3126 WGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFR 3185
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH GN H +V P LV L+ ++V+ +++ H A+T++G++YA+
Sbjct: 3186 LGH-------GNDH-HVRKPTLVEGLR--GKKVIHVAVG-----ALHCLAVTDTGQVYAW 3230
Query: 505 GAGDKGQLG 513
G D GQ G
Sbjct: 3231 GDNDHGQQG 3239
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RP+ I L G I+ A G +
Sbjct: 3990 SGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG +Y +GK +G +G +L +P+LVE+L++ V+ A G+ T ++ +
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDD 4107
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V+++ G + +AL S +Y
Sbjct: 4108 DNVWSWGDGDYGKLGRGGSDGCKVPMK-IESLAGLGVIKVECGSQFSVALTRSGS---IY 4163
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 4164 TWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDND 4221
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4222 EGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLAWS 4261
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 43/295 (14%)
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++G ++G G+ SP +++ + + Q +LS G VY +G++ +
Sbjct: 440 AWGSVKFGGTGS----SPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYGSETQY- 494
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
P + G + V IA+ G YL AL S VYS G G GG+LGH
Sbjct: 495 ---------PQRVYGFSDKF-VAMIASHPDGKHYL-ALTEDSS---VYSWGNGDGGRLGH 540
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G RT + P+LIE L++ +A G+ ++A + +G + TWG G YG LGHGN +
Sbjct: 541 GDRTWYEEPKLIES--LVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDV 598
Query: 402 SVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
VP +V ALN ++VA +GD T V+ G V+S+G G+ LG +
Sbjct: 599 MVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSK----- 653
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 513
TP++V L +N +Y + ALT G++Y +G G+ +LG
Sbjct: 654 ---TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 138/306 (45%), Gaps = 35/306 (11%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVL 266
M++S +G VY S E +Y PQ V + FV A G + A L
Sbjct: 475 MILSTSGNVYMMYYGS--ETQY----------PQRVYGFSDKFVAMIASHPDGKHYLA-L 521
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ + VY++ G+ RLGH EP L+ +L + + IA G Y AL+ S
Sbjct: 522 TEDSSVYSWGNGDGGRLGHGDRTWYEEPK-LIESLVDKNITFIACGSTYSAALS---SNG 577
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+Y+ G G G+LGHG+ D P L+ + V +G V G V +WG
Sbjct: 578 ELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWG 637
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LG G PK+V L D+ V G + ++ G+VY++G GE+ LG
Sbjct: 638 DGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H GN +V P+ + +LK ++V ++ + + H ALTE +Y +G
Sbjct: 698 H-------GNEE-HVRYPKAIEALK--TKKVKELCVG-----SLHVLALTEDQLVYGWGR 742
Query: 507 GDKGQL 512
D GQ+
Sbjct: 743 NDYGQI 748
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G + WG++ R LG E V+ L +L + VQ+ G L A+
Sbjct: 3890 LSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADG 3948
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G G+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3949 K---VYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4005
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G G LGHGN PK+++ L + + VA G + + ++ G +Y++G G
Sbjct: 4006 SWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYG 4065
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D LTP+LV +L+ + +V+ ++ + +A T +T+ +++
Sbjct: 4066 RLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVWS 4112
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4113 WGDGDYGKLG 4122
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG P+ I SL I A G+ + +S
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G +V P LV +L +V A G+ + L F
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMV--PTLVSALNGHMIVYVACGSGDSQTLCVTASGIVF 634
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+ +LG P ++ L +I V ++ G + AL VY+ G
Sbjct: 635 SWGDGDYGKLGRGGCNGSKTPK-IVDKLLDINVAKVYCGGQFSAALTAYGE---VYTWGK 690
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHG+ ++P+ IE + ++ + V G+ H + +D V WG YG +
Sbjct: 691 GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCV--GSLHVLALTEDQLVYGWGRNDYGQI 748
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
S P + L+ I + G +F
Sbjct: 749 DPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSF 781
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 95/170 (55%), Gaps = 7/170 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A++S G +Y++G + G+LGHG +++ P + +L G I+ A G+G +T+
Sbjct: 566 GSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTL 625
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++ +G V+++G +G+ G G+K +P++V+ L +I V + G F+A L+
Sbjct: 626 CVTASGIVFSWGDGDYGKLGRGGCNGSK---TPKIVDKLLDINVAKVYCGGQFSAALTAY 682
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G VYT+ G RLGH E + P + L+ V ++ G ++LAL
Sbjct: 683 GEVYTWGKGEAYRLGHGNEEHVRYPKA-IEALKTKKVKELCVGSLHVLAL 731
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
P AVY G +LG + K P E L L+PV +A G+ VV Q+G++
Sbjct: 2906 PQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSES--LSKLKPVHIAGGSKTLFVVSQEGKL 2963
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCG 440
G G G LG G++ PK + L+ +K + V +G +++DG V+S+G G
Sbjct: 2964 YACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEG 3023
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
E LGH GN +++ P+L+ SLK R V + H+ A+T SG+
Sbjct: 3024 EDGKLGH-------GN-CSSLDKPRLIESLKSKRIRDVACG-------SGHSAAITSSGE 3068
Query: 501 LYAFGAGDKGQLGIELVNNQ 520
LY +G G+ G+LG N Q
Sbjct: 3069 LYTWGLGEYGRLGHGDTNTQ 3088
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG +P + L+G ++I A GA
Sbjct: 3158 QIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALH 3217
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D GQVYA+G + G+ G T + P LV L + V + + G+
Sbjct: 3218 CLAVTDTGQVYAWGDNDHGQQGNG--STIVNKKPSLVHELDDARVNRVSCGS 3267
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G G+LG G P+ + L I + + G +
Sbjct: 619 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAA 678
Query: 212 ISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+VY +GK GEA G + V P+ +E+LK V + +G+ L+ +
Sbjct: 679 LTAYGEVYTWGK---GEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQ 735
Query: 271 RVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
VY WG ND + P LGT+ + P + ++ L C P+
Sbjct: 736 LVY--GWGR----------NDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPT 778
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ G S A+T+ G VY++G + +LGHG E P+ I +L+ ++ + G+
Sbjct: 667 AKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSL 726
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIF 252
+ +++ VY +G++ +G+ + + GT +V+ P L +L KN+
Sbjct: 727 HVLALTEDQLVYGWGRNDYGQIDPAL-GT-IVSEPTLCPTLSGKNVI 771
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 219/473 (46%), Gaps = 40/473 (8%)
Query: 50 LAASPSIVLHVLTACNLDPQDLAKLEAT--CSFFRQ-----PANFAPDYQLSISELAALD 102
L SP + V AC+L+ L T ++FR+ A D + + L +
Sbjct: 3846 LLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDE 3905
Query: 103 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162
+ +K I + M + E D+ +C +K L + RR + ++ G
Sbjct: 3906 VAKK--IRELMADNENMDVLHECHDVFKREQDEQLV-QWMNRRPDDWTLSAGG------- 3955
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 280
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4016 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH P ++ +L I VV IAAG + AC + +++ G G G+LG
Sbjct: 4074 GKLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLG 4129
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
HG D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
VP + +L D+ + V G + +++ G VY++G G+ LGH + +
Sbjct: 4190 CKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDH 4241
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4242 VRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G++
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3245
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3246 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3291
Query: 511 QLG 513
Q G
Sbjct: 3292 QQG 3294
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V+ P E L N+ VVQ A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P+LI
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 175/364 (48%), Gaps = 18/364 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L +L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTDLGVVKVECGSQFSVALT 4218
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--N 4328
Query: 498 SGKL 501
+GKL
Sbjct: 4329 AGKL 4332
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D+ G PQLV
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+SL +NI + A LS G V+++ G+ RLGH EP L G
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ LK ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 725
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG+ G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G+ RLGH T+ + +P + G L +V +A G + LA+ VY+
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYA 3284
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G G+ G+G+ T + P L++ +
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3311
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECE 401
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 257 AIGN 260
A G+
Sbjct: 3319 ACGS 3322
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L NL V +A ++ ++GRV T + LG P++VQ+L +
Sbjct: 449 LANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 473
+A + + +S +G+V+S+GCG+ LGH + P+L+++L KQ
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKLISALSGKQA 550
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
+ VV I+ ++ ++ A+T G+LY +G G+ G+LG +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 175/354 (49%), Gaps = 20/354 (5%)
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---I 197
A C + Q + G S + S G V + G G+LG G +++ + P I + QG
Sbjct: 3707 APCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVT 3766
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ + G +M +++ G+V+++G FG+ +G + P+ +E+L+ VVQ A
Sbjct: 3767 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQIEALQGEDVVQLA 3824
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +AV++ +G+++TF G RLG + N ++P + LE V Q++ G + L
Sbjct: 3825 CGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERV-AALEGYHVGQVSCGLNHTL 3883
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L+ GMAV++ G G GKLG GS T + +P+ +EQ L N V GA + V+
Sbjct: 3884 VLSLD--GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVLA 3939
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG V T+G R L + S P+VV +L + +A G +S GD+Y++
Sbjct: 3940 TDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAW 3999
Query: 438 GCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNA 490
GC LG H N++ P L+T+L+ N + + +S W A
Sbjct: 4000 GCNSEGQLGLG---------HCNLVKEPTLITALQGKNIKQISAGRCHSSAWTA 4044
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 162/351 (46%), Gaps = 27/351 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
VY +GSNSS QL GT E+ P+ + + I+A G T +S G V A GK
Sbjct: 339 TVYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDGSVKACGKG 396
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARL 283
S+G G + + ++E +NI V ++ G + T ++ +G V+++ G +L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH P + G L + VV +AGY + A+ + +Y+ G G G+LGH
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVT---NDGELYTWGEGDFGRLGHSD 513
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECES 402
P L++ + VA G+ H V QDGR + ++G G G LGHG+
Sbjct: 514 SQSRNTPTLVKDISGVG----QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVY 569
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
PKV++AL+ V G ++ ++ G V+++GCG G G+ L
Sbjct: 570 RPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCL---------GCGSSETTSL 620
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V L +++ IS +S H AL+ ++YA+G GQ G
Sbjct: 621 RPRFVEDLSIT--KIIDISCGDS-----HCLALSHENEVYAWGNNTMGQCG 664
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 180/354 (50%), Gaps = 32/354 (9%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-----PIRSLQGIRII 200
++Q I AG + +V++ G V + G S G+LG G + + P+ P R+++ ++
Sbjct: 370 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIK--KVF 427
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ I+ G+V+++G +G+ +G T+ P++V+ L + VV A+ G
Sbjct: 428 SSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIVQGPLFSKIVVSASAG 485
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLA 318
+A ++ +G +YT+ G+ RLGH +D + +++I V Q+A G + +A
Sbjct: 486 YRHSAAVTNDGELYTWGEGDFGRLGH----SDSQSRNTPTLVKDISGVGQVACGSSHTIA 541
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
+A G ++S G G GKLGHG P++IE ++ V AG+ + +
Sbjct: 542 VA--QDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTS 597
Query: 379 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G+V WG G CLG G+ E S+ P+ V+ L+ K I ++ GD +S + +VY++
Sbjct: 598 AGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAW 655
Query: 438 GCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G +N + GQG+ + P+ V L+ V+ + + ++S+ W A
Sbjct: 656 G--------NNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTA 701
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS VT+ G +++FGS SG+LG +T + +P + +L+G + Q + G
Sbjct: 3822 QLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNH 3881
Query: 209 TMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+++S D V+AFG +G+ G K PQ VE L N + + G F+ VL+
Sbjct: 3882 TLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYY--PQKVEQLCNKGMKKVCCGAQFSVVLA 3939
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G VYTF L N P ++ +LE + + IA G ++LAL+ S
Sbjct: 3940 TDGHVYTFGQERLIGLPDSMLKNRSNPQ-VVPSLEGLFIEDIAVGCEHVLALS---STGD 3995
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---AGAWHAAVVGQDGRVC 383
+Y+ GC G+LG G K P LI Q N++ + + AW A ++ +C
Sbjct: 3996 IYAWGCNSEGQLGLGHCNLVKEPTLITALQGKNIKQISAGRCHSSAWTAPSTSKNSALC 4054
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 385
AV +VG G G+LG G+ D P +I FQ + +V + G+ H+ + + G V +W
Sbjct: 3731 AVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSW 3790
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G +G LGHGN E + PK ++AL + +A G + VV+ DG +++FG GES L
Sbjct: 3791 GDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRL 3850
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAF 504
G + +N + P+ V +L+ + V L HT L+ G ++AF
Sbjct: 3851 GQRST--------SNKMQPERVAALEGYHVGQVSCGLN-------HTLVLSLDGMAVWAF 3895
Query: 505 GAGDKGQLGIELVNNQTERGNPERVD 530
G GD G+LG + T + P++V+
Sbjct: 3896 GDGDYGKLG---AGSSTAKYYPQKVE 3918
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 155/357 (43%), Gaps = 32/357 (8%)
Query: 163 KGVVYSFGSNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
K VY +G+ GQL G GT P S + Q G + LI G V A
Sbjct: 3680 KSDVYLWGNGRYGQLAGTGTNLTLPTLAPCLS----QTQQVVCGQNCSFLIQSNGAVMAV 3735
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWG 278
G+ +G G V P ++ + + V Q + + L+ G V+++ G
Sbjct: 3736 GEGQYGRLGQGNSDDLFV--PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDG 3793
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+ +LGH P + L+ VVQ+A G+ + A + +++ G G G+
Sbjct: 3794 DFGKLGHGNNERQRRPKQI-EALQGEDVVQLACGFRHS---AVVTADGKLFTFGSGESGR 3849
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGN 397
LG S +++ P + + ++ V + G H V+ DG V +G G YG LG G+
Sbjct: 3850 LGQRSTSNKMQPERVAALEGYHVGQV--SCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS 3907
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ P+ V+ L + V G + V++ DG VY+FG + +G + D
Sbjct: 3908 STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG--QERLIG---LPDSMLKN 3962
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+N PQ+V SL+ + + + H AL+ +G +YA+G +GQLG+
Sbjct: 3963 RSN---PQVVPSLEGLFIEDIAVGC-------EHVLALSSTGDIYAWGCNSEGQLGL 4009
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 149 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H+IAV G ++SFG +G+LGHG T +RP+ I +L G I + AG+
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 590
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 265
++ ++ AGQV+A+G S G+ TS P+ VE L ++ + G+
Sbjct: 591 SSLALTSAGQVFAWGCGSCLGC-----GSSETTSLRPRFVEDLSITKIIDISCGDSHCLA 645
Query: 266 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
LS E VY +WGN+ +G HT P +LG LE + + QI AG + LA
Sbjct: 646 LSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-LEGVSIQQITAGTSHSLAWTA 701
Query: 322 QPS 324
P+
Sbjct: 702 VPT 704
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E C + + G S+ + + G VY+FG L + P+ + SL+G+ I
Sbjct: 3918 EQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFI 3977
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
A G + +S G +YA+G +S E + G+ LV P L+ +L+ + Q + G
Sbjct: 3978 EDIAVGCEHVLALSSTGDIYAWGCNS--EGQLGLGHCNLVKEPTLITALQGKNIKQISAG 4035
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 22/382 (5%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S I G H+ A + + + +YS+G G+LGHG + + + P+PI++LQG+RI Q A G
Sbjct: 79 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG V+++G++ G+ G+ T+ PQ +++ + + V A G TA +
Sbjct: 139 SHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 196
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++ +V +A G+ + + ++ S
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMVLVACGWRHTITVS---SSG 252
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
++Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 253 SIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI---SGGWRHTMALAADGKLYGW 309
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G G+ E P V N+ K + VA G T ++E +V+S+G G S L
Sbjct: 310 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 369
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH I D N+ P+++ +L Q+ + ++ +A + + YA
Sbjct: 370 GHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAVPMSAKVW--VSPSERYAIV 419
Query: 506 AGDKGQLGIELVNNQTERGNPE 527
+K GI N TE P+
Sbjct: 420 PDEKAGKGIP-AGNGTETHVPQ 440
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 166/363 (45%), Gaps = 70/363 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S GVV S+G GQLGHG E+ RP+ + ++ AA
Sbjct: 27 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED----RPVPT-----VLTAA-------- 69
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
F +A GV + + + TA E +
Sbjct: 70 --------------FDDAPGGVASVVICGA------------------DHTTAYSDEELQ 97
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+Y++ WG+ RLGH + P P+ L+ + + QIA G + LA+ V+S
Sbjct: 98 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 153
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + +P+ V ++N K + VA G T VS G +Y++G + LGH
Sbjct: 212 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
D L P + +LK + QIS W HT AL GKLY +G GQ
Sbjct: 272 DH--------LVPHKLEALKDTT--ISQISGG----WR-HTMALAADGKLYGWGWNKFGQ 316
Query: 512 LGI 514
+G+
Sbjct: 317 VGV 319
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G VY +G N GQLG + P P +L +R Q G ++ G
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADG 2840
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 2841 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2898
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 2899 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGGLYTWGKG 2954
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + +D V +WG G YG LG
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP V AL + A+ V G + +++ G VY++G G+ LGH +
Sbjct: 3015 RGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3069
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3070 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3118
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + +Q A G+ ++
Sbjct: 1785 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTV 1844
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G GV + V P+ V +L + V + A+ G L+ +G+V
Sbjct: 1845 EGKVYACGEATNGRLGLGVS-SGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKV 1903
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L++ + IA G + AL S +Y+ G
Sbjct: 1904 FSWGEGDDGKLGHFSRXNCDKPR-LIEALKSRRIRDIACGSSHSAALT---SSGELYTWG 1959
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ L+ + V VA G+ A + +G V +WG G +
Sbjct: 1960 LGEYGRLGHGDNTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDF 2017
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E +VP+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 2018 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 2076
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 2077 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 2122
Query: 511 QLG 513
Q G
Sbjct: 2123 QQG 2125
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA +Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 2816 EALAALRPAQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2875
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 2876 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 2933
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 2934 AGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 2992
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P ++ L L V V G+ + +
Sbjct: 2993 TL-CLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVD--ALTGLGAVKVECGSQFSVALT 3049
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3050 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3109
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 3110 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 3159
Query: 498 SGKLYA 503
+GKL A
Sbjct: 3160 AGKLPA 3165
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 168/350 (48%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N+ +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 1828 NAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAV 1887
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L +D G+V+++G+ G+ + + P+L+E+LK+ + A G+
Sbjct: 1888 HSGGRHATALTAD-GKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSS 1944
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L VVQ+A G LA
Sbjct: 1945 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLVGHRVVQVACGSRDAQTLAL 2003
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2004 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2059
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2060 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2119
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 2120 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2160
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 8/220 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA R G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+
Sbjct: 1929 EALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRV 1988
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ ++D G V+++G FG + G G++ PQ +E L V Q
Sbjct: 1989 VQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNIERLNGQGVCQIE 2046
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L++ G V+T+ G+ RLGH ++ + +P + G L +V +A G + L
Sbjct: 2047 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCL 2105
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
A+ VY+ G G+ G+G+ T + P L++ +
Sbjct: 2106 AVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2142
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R IQ G ++ G++YA G
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3766 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3823
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L I VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 3824 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGH 3879
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 3880 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3939
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L + + V G + +++ G VY++G G+ LGH + +V
Sbjct: 3940 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 3991
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3992 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4036
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2702 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2761
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G++
Sbjct: 2762 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 2820
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 2876
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 2993
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 2994 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3039
Query: 511 QLG 513
Q G
Sbjct: 3040 QQG 3042
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 172/355 (48%), Gaps = 18/355 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3743 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3802
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3803 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACI 3860
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ V+ IA G L C
Sbjct: 3861 TAAGDLYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQTL-CLTDDD 3918
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3919 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3976
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3977 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4036
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
DG N + P+LV +L+ V +++ W+ A +GKL
Sbjct: 4037 -----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--NAGKL 4081
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2745 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 2804
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 2805 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 2862
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2863 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 2921
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2922 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2977
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2978 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3034
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2918
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG+ G G++ PQ +E L V Q G F+ L++ G
Sbjct: 2919 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G+ RLGH T+ + +P + G L +V +A G + LA+ VY+
Sbjct: 2977 VVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYA 3032
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G G+ G+G+ T + P L++ +
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3059
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G + WG++ R LG P P L + +Q+ G L A+
Sbjct: 3700 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPIQLIGGEQTLFAVT--- 3755
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3756 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3815
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G LGHGN P+V+++L ++ + +A G + ++ GD+Y++G G
Sbjct: 3816 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 3875
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D L P+LV +L+ RV+ I+ + +A T LT+ +++
Sbjct: 3876 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 3922
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 3923 WGDGDYGKLG 3932
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 2954 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3008
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3009 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3066
Query: 257 AIGN 260
A G+
Sbjct: 3067 ACGS 3070
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 34/172 (19%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ + Q A +LSR GRVY ++ +D +G
Sbjct: 354 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVG-------------- 399
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
+ A + + V+S G G GKLG G K P+LIE+ Q
Sbjct: 400 ----------VVAVFSLIFG--------QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 441
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
L++ V V G+ + + +DG+V +WG G LGHG EE PK+++ L
Sbjct: 442 LDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKD-----------------SFGE 228
P L + I Q A R +++S G+VY A+ D S+G+
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGD 416
Query: 229 AEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
+YG G + +P+L+E L+++ VV+ G+ F+ L+++G+VY++ G++ RLGH
Sbjct: 417 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 476
Query: 286 HTEPNDVEPHPLLGTLENIP 305
TE + P L G +P
Sbjct: 477 GTEEHVRYPKLLEGLQATLP 496
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G+V +WG G YG LG G + PK+++ L D+ + V G + +++DG VYS+G
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468
Query: 440 GESASLGH 447
G++ LGH
Sbjct: 469 GDNQRLGH 476
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 134 RFLLA---GEACCRRENSQAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEWRP 188
RFL+ G + NS + G +AV S G V+S+G G+LG G ++ P
Sbjct: 377 RFLILSRNGRVYMQAYNSDTLVG---VVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTP 433
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+E L
Sbjct: 434 KLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGL 491
Query: 249 K 249
+
Sbjct: 492 Q 492
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2223
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++FV + A+ G LS EG VY+
Sbjct: 2224 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYS 2281
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV IAAG + AC +YS G G
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPR-VVESLRGIEVVDIAAGGAHS---ACITVAGDLYSWGKG 2337
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGHG D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 2338 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2397
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2398 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 2452
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 2453 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 2501
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RPR + SL+GI ++ AAG +
Sbjct: 2265 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSAC 2324
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG +Y++GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 2325 ITVAGDLYSWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 2382
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 2383 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 2438
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 2439 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 2496
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 2497 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 2536
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 18/364 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + +
Sbjct: 2199 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFV 2258
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P++VESL+ I VV A
Sbjct: 2259 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGIEVVDIA 2316
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +Y++ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 2317 AGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 2375
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 2376 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 2432
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 2433 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 2492
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 2493 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--N 2542
Query: 498 SGKL 501
+GKL
Sbjct: 2543 AGKL 2546
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ G PQLV
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDTLG--------------PQLV 192
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI V A L+ G V+++ G+ RLGH EP L G
Sbjct: 193 QGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 252
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 253 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 309
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 310 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 369
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++VV +
Sbjct: 370 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVVDV 419
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 420 AAGST-----HCLALTEDSEVHSWGSNDQCQ 445
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 147/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVY ++ +D LG L+
Sbjct: 144 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDT-LGPQ----------LV 192
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V++AA G+ Y LALA V+S GCG GG+LGHG + P++I
Sbjct: 193 QGLASRNIVKVAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKMISA 248
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 249 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 308
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 309 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 360
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ +V++ + + ALT+ G++Y++G GD +LG
Sbjct: 361 DLD--IVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 395
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 28/301 (9%)
Query: 217 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
+V+ +G KD G G++G+K + P E+L + VVQ A G+ ++ EG+VY
Sbjct: 1150 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 1204
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ RLG V + L N V ++A A+A G V+S G
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 1263
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G GKLGH SR + PRLIE + ++ + A G+ H+A + G + TWG G YG L
Sbjct: 1264 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAAITSSGELYTWGLGEYGRL 1321
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
GHG+ + PK+V+ L + I VA G D T ++++G V+S+G G+ LG
Sbjct: 1322 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--- 1378
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
G+ NV PQ + L + V QI + ALT+SG ++ +G GD G+
Sbjct: 1379 ---GSEGCNV--PQNIERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWGRGDFGE 1426
Query: 512 L 512
L
Sbjct: 1427 L 1427
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 264 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 323
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 324 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 381
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ VV +AAG + LAL
Sbjct: 382 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVVDVAAGSTHCLAL 429
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 11/295 (3%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 1140 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 1199
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 1200 EGKVYACGEATNGRLGLGIS-SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 1258
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 1259 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 1314
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 1315 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1372
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G LG G E +VP+ ++ LN + G + +++ G V+++G G+ L
Sbjct: 1373 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 270
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 271 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 328
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 329 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 384
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + V VAAG+ H + +D V +WG
Sbjct: 385 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVVDVAAGSTHCLALTEDSEVHSWG--- 439
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 440 ------SNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSFAWS 482
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 271 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 1148 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 1204
Query: 330 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1264
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 1265 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 1323
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ L P++V L + RV+Q++ + +A T ALT+ G ++++G GD
Sbjct: 1324 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 1371
Query: 509 KGQLG 513
G+LG
Sbjct: 1372 FGKLG 1376
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 1183 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAV 1242
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 1243 HSGGRHAMALTVDGKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1300
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 1301 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 1359
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 1360 DEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 1415
Query: 382 VCTWGWGRYGCL 393
V TWG G +G L
Sbjct: 1416 VWTWGRGDFGEL 1427
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ VV A G+ L+ +
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 435 VH--SWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACG 474
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 404 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P++VQ L + VA + + ++ G+V+S+GCG+ LGH +
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVP--------L 240
Query: 462 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
P+++++L KQ + VV I+ ++ ++ A+T G+LY +G G+ G+LG +
Sbjct: 241 EEPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 295
Query: 520 QT 521
QT
Sbjct: 296 QT 297
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 173/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4017 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L I VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 4075 KLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGH 4130
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L V + V G + +++ G VY++G G+ LGH + +V
Sbjct: 4191 KVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4242
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4243 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 26/357 (7%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 278
G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V+++ G
Sbjct: 3020 CGEATNGRLGLGL-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+D +LGH + N +P L+ L+ + IA G + A+ S +YS G G G+
Sbjct: 3079 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGR 3134
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 396
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3193 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT------- 3245
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V PQ+V L+ ++++ +++ H A+T++G++YA+G D GQ G
Sbjct: 3246 -DVHVRKPQVVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3294
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG +Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGVGVVKVECGSQFSVALT--KSG-AVY 4224
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4283 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4322
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D G PQLV
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDILG--------------PQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+SL +NI + A L+ G V+++ G+ RLGH EP L G
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V+
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ E+V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GEKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ + H ALTE ++Y++G+ D+ Q
Sbjct: 716 -----VAGSTHCLALTEDSEVYSWGSNDQCQ 741
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 18/364 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L + V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGVGVVKVECGSQFSVALT 4218
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--N 4328
Query: 498 SGKL 501
+GKL
Sbjct: 4329 AGKL 4332
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 151/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V+ P E L ++ V Q A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDI-LGPQ----------LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+L + +V+IAA G+ Y LALA V+S GCG GG+LGHG + P++I
Sbjct: 489 QSLASRNIVKIAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ +V++S + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--IVKVSCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 22/354 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAV 3056
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +Y++ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYSWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V TWG G Y LGHG + P+VV+ L K IHVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 442 SASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
QGN V P LV L+ V ++S+ W A
Sbjct: 3290 HGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWTTMDVA 3334
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 114/182 (62%), Gaps = 8/182 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ + G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+VY++ G++ RLGH TE + P LL L+ V+ + AG + LAL VYS
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGEKVIDVVAGSTHCLALT---EDSEVYS 733
Query: 331 VG 332
G
Sbjct: 734 WG 735
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVSCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + V AG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GEKVIDVVAGSTHCLALTEDSEVYSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSFAWS 778
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4010 K---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G LGHGN P+V+++L ++ + +A G + ++ GD+Y++G G
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D L P+LV +L+ RV+ I+ + +A T LT+ +++
Sbjct: 4127 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4173
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4174 WGDGDYGKLG 4183
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ + G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
VY SWG++ + H +P P L L++ +V IA G
Sbjct: 731 VY--SWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACG 770
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+II A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 257 AIGN 260
A G+
Sbjct: 3319 ACGS 3322
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 17/122 (13%)
Query: 404 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P++VQ+L + +A + + ++ G+V+S+GCG+ LGH +
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 537
Query: 462 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
P+++++L KQ + VV I+ ++ ++ A+T G+LY +G G+ G+LG +
Sbjct: 538 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 591
Query: 520 QT 521
QT
Sbjct: 592 QT 593
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 187/382 (48%), Gaps = 22/382 (5%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S I G H+ A + + + +YS+G G+LGHG + + + P+PI++LQG+RI Q A G
Sbjct: 84 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 143
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG V+++G++ G+ G+ T+ PQ +++ + + V A G TA +
Sbjct: 144 SHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 201
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++ +V +A G+ + + ++ S
Sbjct: 202 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMVLVACGWRHTITVSSSGS-- 258
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 259 -IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI---SGGWRHTMALAADGKLYGW 314
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G G+ E P V N+ K + VA G T ++E +V+S+G G S L
Sbjct: 315 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 374
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH I D N+ P+++ +L Q+ + ++ +A + + YA
Sbjct: 375 GHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAVPMSAKVW--VSPSERYAIV 424
Query: 506 AGDKGQLGIELVNNQTERGNPE 527
+K GI N TE P+
Sbjct: 425 PDEKAGKGIP-AGNGTETHVPQ 445
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 168/363 (46%), Gaps = 70/363 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S GVV S+G GQLGHG E+ RP+ + ++ AA
Sbjct: 32 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED----RPVPT-----VLTAA-------- 74
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
F +A GV ++ + A + TA E +
Sbjct: 75 --------------FDDAPGGV---------------ASVVICGA---DHTTAYSDEELQ 102
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+Y++ WG+ RLGH + P P+ L+ + + QIA G + LA+ V+S
Sbjct: 103 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 158
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 159 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 216
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + +P+ V ++N K + VA G T VS G +Y++G + LGH
Sbjct: 217 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
D L P + +LK + QIS W HT AL GKLY +G GQ
Sbjct: 277 DH--------LVPHKLEALKDTT--ISQISGG----WR-HTMALAADGKLYGWGWNKFGQ 321
Query: 512 LGI 514
+G+
Sbjct: 322 VGV 324
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 175/364 (48%), Gaps = 25/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S VV S+G GQLGHG T++ P + +L +I+ GA T+
Sbjct: 22 AGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLA 81
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ +VY++G FG +G + PQ + +L+ + + Q A G+ ++ EG
Sbjct: 82 YSESKVEVYSWGWGDFGRLGHGNSSDLFI--PQPIRALQGLRIKQIACGDSHCLAVTMEG 139
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + T + +P+ +AAG + +A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 195
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P E+ + + V+VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRCIP---EKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKY 252
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ + VP +QA +D V+ G T ++ G +Y +G + G +
Sbjct: 253 GQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNK---FGQVGV 309
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D NV V +++V QIS W HT A+TE +Y++G G G
Sbjct: 310 GD-------NVDRCSPVQVKFPHDQKVAQISCG----WR-HTIAVTEKDNVYSWGRGTNG 357
Query: 511 QLGI 514
QLGI
Sbjct: 358 QLGI 361
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 152/298 (51%), Gaps = 12/298 (4%)
Query: 151 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G H++A + SK VYS+G G+LGHG + + + P+PIR+LQG+RI Q A G
Sbjct: 73 VCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHC 132
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ ++ G+V ++G++ G+ G LV PQ +++ + + + A G + ++
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQTFQGVPIKMVAAGAEHSVAITEN 190
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G +Y + WG LG + P + +++ +V +A G+ + ++++ S +Y
Sbjct: 191 GELYGWGWGRYGNLGLGDRNDRCIPEKV--SVDCDKMVLVACGWRHTISVS---SSGELY 245
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 388
+ G G+LGHG D P ++ F + + + +G W H + G++ WGW
Sbjct: 246 TYGWSKYGQLGHGDCKDHLVPHKLQAF---SDKLICQVSGGWRHTMALTTGGQLYGWGWN 302
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
++G +G G+ P V+ +D K ++ G T V+E +VYS+G G + LG
Sbjct: 303 KFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLG 360
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 11/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG GTTE+ P+ I++ QG+ I AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEH 183
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I++ G++Y +G +G G + + + V+ K + V A G T +S
Sbjct: 184 SVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLV---ACGWRHTISVSS 240
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L + + + Q++ G+ + +AL +G +
Sbjct: 241 SGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKL-ICQVSGGWRHTMALT---TGGQL 296
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q + + Q V + W H V + V +WG
Sbjct: 297 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGR 353
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G+ + PK+++AL+
Sbjct: 354 GTNGQLGIGDTIDWNYPKIIEALS 377
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 26/229 (11%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ I+AG + +AL SG V S G G G+LGHG D P Q L+ Q +V
Sbjct: 17 VLLISAGGSHSVALI---SGNVVCSWGRGEDGQLGHGDTDDRLLP---TQLSALDAQQIV 70
Query: 366 -VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
V GA H + V +WGWG +G LGHGN +P+ ++AL ++ +A GD
Sbjct: 71 SVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDS 130
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
V+ +G+V S+G ++ LG D L PQ + + + V ++V
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDS--------LVPQKIQTFQGVPIKMVAAGA- 181
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
H+ A+TE+G+LY +G G G LG+ ++ +R PE+V +D
Sbjct: 182 ------EHSVAITENGELYGWGWGRYGNLGL---GDRNDRCIPEKVSVD 221
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 11/320 (3%)
Query: 148 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQGI+I Q A G
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGD 138
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG+V ++G++ G+ G L+ PQ ++S + + V A G TA +
Sbjct: 139 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQSFEGVCVKMIAAGAEHTAAV 196
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++E +V IA G+ + + ++ S
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRNDRLVPEKV-SSVEGEKMVLIACGWRHTITVS---SSG 252
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
++Y+ G G+LGHG D P +E + ++ + +G W H + DG++ W
Sbjct: 253 SLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQI---SGGWRHTMALTSDGKLYGW 309
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G G+ + P V+ D K VA G T +E +V+S+G G S L
Sbjct: 310 GWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQL 369
Query: 446 GHNAIADGQGNRHANVLTPQ 465
GH I D + L+P
Sbjct: 370 GHGEIVDRNKPVMIDALSPD 389
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 159/363 (43%), Gaps = 72/363 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + V+ S+G GQLGHG E+ P + AA G T +
Sbjct: 29 AGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD-------AAAPGITSV 81
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I A A+ +D E +
Sbjct: 82 ICGADHTTAYSED--------------------------------------------EQQ 97
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
VY++ WG+ RLGH + P P+ L+ I + QIA G + LA+ V S
Sbjct: 98 VYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGIKIKQIACGDSHCLAVTMAGE---VQSW 153
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 154 GRNQNGQLGLGTTEDSLLPQKIQSFEGVCVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ VP+ V ++ K + +A G T VS G +Y++G + LGH
Sbjct: 212 NLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFE 271
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
D L P + +LK + + QIS W HT ALT GKLY +G GQ
Sbjct: 272 DH--------LVPHKLEALK--DSSISQISGG----WR-HTMALTSDGKLYGWGWNKFGQ 316
Query: 512 LGI 514
+G+
Sbjct: 317 VGV 319
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 176/363 (48%), Gaps = 25/363 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+A+ S G+V S+G GQLGHG +E P+ I +L I GA T+ +
Sbjct: 21 GSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAV 80
Query: 213 SDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + GQVY++G FG +G V P+ +E V + A G+ T V++ EG
Sbjct: 81 APSRGQVYSWGWGDFGRLGHGDCNDVFV--PRPIEFFSGRPVHRVACGDTHTLVVAGEGE 138
Query: 272 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
++TF + +LG HT ND L+ L+ V +A G + +LA SG V+S
Sbjct: 139 LFTFGRNQNGQLGLGHT--NDCLSPQLVVALQGERVRSVACGSEH--SLAATESGT-VFS 193
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G D P + L ++ V G H+AVV +DGRV T+GW +Y
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRV--VGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKY 251
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ +VP V AL + VA G T G++Y +G + LG
Sbjct: 252 GQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDS 311
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+D R + VL + + +SL + HT A+TE G++Y++G G G
Sbjct: 312 SD----RPSPVLVGGALAGQR--------VSLVTCGW--RHTVAVTEGGRVYSWGRGVNG 357
Query: 511 QLG 513
QLG
Sbjct: 358 QLG 360
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 12/305 (3%)
Query: 151 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G ++IAV S+G VYS+G G+LGHG + + PRPI G + + A G T
Sbjct: 71 VCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHT 130
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++++ G+++ FG++ G + G+ T SPQLV +L+ V A G+ + +
Sbjct: 131 LVVAGEGELFTFGRNQNG--QLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES 188
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ WG LG + P ++G LE I +V G+ + ++ V+
Sbjct: 189 GTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHSAVVSEDGR---VF 244
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 388
+ G G+LGHG TD P + + + V AG W H G + WGW
Sbjct: 245 TFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSV---AGGWRHTMAADSSGNLYGWGWN 301
Query: 389 RYGCLGHGNEECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++G LG G+ P +V AL + V G T V+E G VYS+G G + LGH
Sbjct: 302 KFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361
Query: 448 NAIAD 452
A D
Sbjct: 362 GAEQD 366
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + G+ ++ I G V ++G+ G+ +G L +P+ + +L + +
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL--APKAISTLTDAGIESVVC 72
Query: 259 GNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYL 316
G +T AV G+VY++ WG+ RLGH + NDV P P+ PV ++A G +
Sbjct: 73 GAEYTIAVAPSRGQVYSWGWGDFGRLGH-GDCNDVFVPRPIE-FFSGRPVHRVACGDTHT 130
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
L +A + +++ G G+LG G D P+L+ Q ++ V A G+ H+
Sbjct: 131 LVVAGEGE---LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV--ACGSEHSLAA 185
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G V +WGWGRYG LG G + +P V L ++ + G + VVSEDG V++
Sbjct: 186 TESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFT 245
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
FG + LGH H + P V +L+ R+ ++ W HT A
Sbjct: 246 FGWSKYGQLGH--------GDHTDRTVPCQVAALRHT--RISSVAGG----WR-HTMAAD 290
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
SG LY +G GQLG+ + ++R +P
Sbjct: 291 SSGNLYGWGWNKFGQLGL---GDSSDRPSP 317
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 19/341 (5%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+IA + + +YS+G G+LGHG + + + P+PI +LQG++I Q A G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGD 135
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ GQV+++G++ G+ G L+ PQ +++ + + V A G T +
Sbjct: 136 SHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVCVKMIAAGAEHTTAI 193
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +Y + WG LG + P + ++E +V +A G+ + ++++ S
Sbjct: 194 TEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACGWRHSVSVS---SSG 249
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
A+Y+ G G+LGHG D PR +E + + P+ +G W H V +DG++ W
Sbjct: 250 ALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWRHTMAVAEDGKLYGW 306
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G + P V ++ K + VA G T ++E+ +++S+G G S L
Sbjct: 307 GWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQL 366
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
GH I D TP+++ +L Q+ +N +
Sbjct: 367 GHGEIIDRN--------TPKMIDALSLDGSACKQLESSNVV 399
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 179/380 (47%), Gaps = 27/380 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS A+ S +V S+G GQLGHG +E+ P + S R+ GA T+
Sbjct: 28 AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIA 87
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D Q+Y++G FG +G + V +PQ + +L+ + + Q A G+ ++ G
Sbjct: 88 YSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V+++ + +LG + + P + E + V IAAG + A+ G +Y
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCVKMIAAGAEHTTAIT---EGGDLYG 201
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG R D P + + + V+VA G H+ V G + T+GW +Y
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLVACGWRHSVSVSSSGALYTYGWSKY 259
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ + VP+ ++AL DV ++ G T V+EDG +Y +G + +G
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D N Q ++VQ++ W HT ALTE+ ++++G G G
Sbjct: 320 VDHCSPVEVNFPDEQ----------KIVQVACG----WR-HTLALTENKNIFSWGRGASG 364
Query: 511 QLGIELVNNQTERGNPERVD 530
QLG + +R P+ +D
Sbjct: 365 QLGHGEI---IDRNTPKMID 381
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 218/473 (46%), Gaps = 40/473 (8%)
Query: 50 LAASPSIVLHVLTACNLDPQDLAKLEAT--CSFFRQ-----PANFAPDYQLSISELAALD 102
L SP + V AC+L+ L T ++FR+ A D + + L +
Sbjct: 3822 LLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDE 3881
Query: 103 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162
+ +K I + M + E D+ +C +K L + RR + ++ G
Sbjct: 3882 VAKK--IRELMADNEHMDVLHECHDVFKREQDEQLV-QWMNRRPDDWTLSAGG------- 3931
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3932 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 280
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 3992 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4049
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH P ++ +L I VV IAAG + AC + +++ G G G+LG
Sbjct: 4050 GKLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLG 4105
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
HG D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4106 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4165
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
VP + +L + + V G + +++ G VY++G G+ LGH + +
Sbjct: 4166 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDH 4217
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4218 VRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4263
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2930 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2989
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G++
Sbjct: 2990 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3048
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3049 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3104
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3105 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3162
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3163 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3221
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3222 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3267
Query: 511 QLG 513
Q G
Sbjct: 3268 QQG 3270
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D+ G PQLV
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 464
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+SL +NI + A LS G V+++ G+ RLGH EP L G
Sbjct: 465 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGK 524
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 525 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 581
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 582 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 641
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ LK ++V+ +
Sbjct: 642 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 691
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 692 AAGST-----HCLALTEDSEVHSWGSNDQCQ 717
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 18/364 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3961 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4020
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4021 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4078
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4079 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4137
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4138 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4194
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4195 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4254
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4255 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--N 4304
Query: 498 SGKL 501
+GKL
Sbjct: 4305 AGKL 4308
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V+ P E L ++ VVQ A +LSR GRVYT ++ +D LG L+
Sbjct: 416 VSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 464
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P+LI
Sbjct: 465 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 520
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 521 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 580
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 581 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 632
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 633 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 667
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2973 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3032
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 3033 HSGGRHAMALTVDGKIFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3090
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3091 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3149
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3150 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3205
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3206 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3262
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 595
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 596 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 653
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 654 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 701
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3146
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG+ G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3147 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3204
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G+ RLGH T+ + +P + G L +V +A G + LA+ VY+
Sbjct: 3205 VVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYA 3260
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G G+ G+G+ T + P L++ +
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGLE 3287
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 542
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 600
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 656
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 657 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 711
Query: 390 YGCLGHGNEECE 401
N++C+
Sbjct: 712 ------SNDQCQ 717
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 707 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 746
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3182 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3236
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3237 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3294
Query: 257 AIGN 260
A G+
Sbjct: 3295 ACGS 3298
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L +L V +A ++ ++GRV T + LG P++VQ+L +
Sbjct: 425 LASLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 474
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 473
+A + + +S +G+V+S+GCG+ LGH + P+L+++L KQ
Sbjct: 475 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKLISALSGKQA 526
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
+ VV I+ ++ ++ A+T G+LY +G G+ G+LG +QT
Sbjct: 527 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 569
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 19/341 (5%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+IA + + +YS+G G+LGHG + + + P+PI +LQG++I Q A G
Sbjct: 76 TSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGD 135
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ GQV+++G++ G+ G L+ PQ +++ + + V A G T +
Sbjct: 136 SHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVCVKMIAAGAEHTTAI 193
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +Y + WG LG + P + ++E +V +A G+ + ++++ S
Sbjct: 194 TEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACGWRHSVSVS---SSG 249
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
A+Y+ G G+LGHG D PR +E + + P+ +G W H V +DG++ W
Sbjct: 250 ALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWRHTMAVAEDGKLYGW 306
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G + P V ++ K + VA G T ++E+ +++S+G G S L
Sbjct: 307 GWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQL 366
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
GH I D TP+++ +L Q+ +N +
Sbjct: 367 GHGEIIDRN--------TPKMIDALSLDGSACKQLESSNVV 399
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 179/380 (47%), Gaps = 27/380 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS A+ S +V S+G GQLGHG +E+ P + S R+ GA T+
Sbjct: 28 AGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIA 87
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D Q+Y++G FG +G + V +PQ + +L+ + + Q A G+ ++ G
Sbjct: 88 YSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNG 145
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V+++ + +LG + + P + E + V IAAG + A+ G +Y
Sbjct: 146 QVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCVKMIAAGAEHTTAIT---EGGDLYG 201
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG R D P + + + V+VA G H+ V G + T+GW +Y
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLVACGWRHSVSVSSSGALYTYGWSKY 259
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ + VP+ ++AL DV ++ G T V+EDG +Y +G + +G
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D N Q ++VQ++ W HT ALTE+ ++++G G G
Sbjct: 320 VDHCSPVEVNFPDEQ----------KIVQVACG----WR-HTLALTENKNIFSWGRGASG 364
Query: 511 QLGIELVNNQTERGNPERVD 530
QLG + +R P+ +D
Sbjct: 365 QLGHGEI---IDRNTPKMID 381
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 171/348 (49%), Gaps = 20/348 (5%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQA 202
+ Q + G S + S GVV + G G+LG G +++ + P I + QG +++ +
Sbjct: 3051 QTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTS 3110
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
G +M +++ G+V+++G FG+ +G + P+ +E+L+ VVQ A G
Sbjct: 3111 CGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQIEALQGEDVVQLACGFRH 3168
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+AV++ +G+++TF G RLG + N + P + LE V Q++ G + L L+
Sbjct: 3169 SAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERV-AALEGYHVGQVSCGLNHTLVLSLD 3227
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
GMAV++ G G GKLG GS T + +P+ +EQ L N V GA + VV DG V
Sbjct: 3228 --GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMKKVCCGAQFSVVVACDGHV 3283
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
T+G R L + S P+VV +L + +A G +S GDVY++GC
Sbjct: 3284 YTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSE 3343
Query: 443 ASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWN 489
LG H N V P L+T+L+ N + + +S W
Sbjct: 3344 GQLGLG---------HCNPVKEPTLITALQGKNIKQISAGRCHSSAWT 3382
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 32/374 (8%)
Query: 143 CRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 201
C +S A PG AVT VY +GSNSS QL GT E+ P+ + + I+
Sbjct: 363 CLCSSSTDAASPGTEGDAVT----VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIE 418
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-N 260
A G T +S G V A GK S+G G + + ++E +NI V ++ G +
Sbjct: 419 A--GQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T ++ +G V+++ G +LGH P + G L + VV +AGY + A+
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVT 536
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+Y+ G G G+LGH P L++ + VA G+ H V QDG
Sbjct: 537 ---KDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG----QVACGSSHTIAVAQDG 589
Query: 381 R-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
R V ++G G G LGHG+ PKV++AL+ V G ++ ++ G V+++GC
Sbjct: 590 RTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC 649
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G G G+ L P+ V L +++ IS +S H AL+
Sbjct: 650 GSCL---------GCGSSETTSLRPRFVEDLSIT--KIIDISCGDS-----HCLALSHEN 693
Query: 500 KLYAFGAGDKGQLG 513
++YA+G GQ G
Sbjct: 694 EVYAWGNNTMGQCG 707
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 183/352 (51%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLQGIRIIQAA 203
++Q I AG + +V++ G V + G S G+LG G + + P+ + + I+ + ++
Sbjct: 413 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSS 472
Query: 204 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNF 261
G+ G T+ I+ G+V+++G +G+ +G T+ P++++ L + VV A+ G
Sbjct: 473 KGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIIQGPLFSKIVVSASAGYR 530
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALA 320
+A ++++G +YT+ G+ RLGH +D + + +++I V Q+A G + +A+A
Sbjct: 531 HSAAVTKDGELYTWGEGDFGRLGH----SDSQSRNMPTLVKDISGVGQVACGSSHTIAVA 586
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
G V+S G G GKLGHG P++IE ++ V AG+ + + G
Sbjct: 587 --QDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTSAG 642
Query: 381 RVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
+V WG G CLG G+ E S+ P+ V+ L+ K I ++ GD +S + +VY++G
Sbjct: 643 QVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWG- 699
Query: 440 GESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+N + GQG+ + P+ V L+ V+ + + ++S+ W A
Sbjct: 700 -------NNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTA 744
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 41/271 (15%)
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------- 321
G+ + WGN R G L GT N+ V +A + C
Sbjct: 3018 GKSDVYLWGN-GRYGQ-----------LAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLI 3065
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDG 380
Q +G+ V +VG G G+LG G+ D P +I FQ + +V + G+ H+ + + G
Sbjct: 3066 QSNGV-VTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3124
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V +WG G +G LGHGN E + PK ++AL + +A G + VV+ DG +++FG G
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG- 499
ES LG + +N + P+ V +L+ + V L HT L+ G
Sbjct: 3185 ESGRLGQRST--------SNKMLPERVAALEGYHVGQVSCGLN-------HTLVLSLDGM 3229
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
++AFG GD G+LG + T + P++V+
Sbjct: 3230 AVWAFGDGDYGKLG---AGSSTAKYYPQKVE 3257
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 149 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H+IAV G V+SFG +G+LGHG T +RP+ I +L G I + AG+
Sbjct: 574 QVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 633
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 265
++ ++ AGQV+A+G S G+ TS P+ VE L ++ + G+
Sbjct: 634 SSLALTSAGQVFAWGCGSCLGC-----GSSETTSLRPRFVEDLSITKIIDISCGDSHCLA 688
Query: 266 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
LS E VY +WGN+ +G HT P +LG LE + + QI AG + LA
Sbjct: 689 LSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-LEGVSIQQITAGTSHSLAWTA 744
Query: 322 QPS 324
P+
Sbjct: 745 VPT 747
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 152/356 (42%), Gaps = 30/356 (8%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
K VY +G+ GQL GT P SL + Q G + LI G V A G
Sbjct: 3019 KSDVYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQTQ--QVVCGQNCSFLIQSNGVVTAVG 3075
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGN 279
+ +G G V P ++ + + V Q + + L+ G V+++ G+
Sbjct: 3076 EGQYGRLGQGNSDDLYV--PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3133
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LGH P + L+ VVQ+A G+ + A + +++ G G G+L
Sbjct: 3134 FGKLGHGNNERQRRPKQI-EALQGEDVVQLACGFRHS---AVVTADGKLFTFGSGESGRL 3189
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNE 398
G S +++ P + + ++ V + G H V+ DG V +G G YG LG G+
Sbjct: 3190 GQRSTSNKMLPERVAALEGYHVGQV--SCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P+ V+ L + V G + VV+ DG VY+FG L + +
Sbjct: 3248 TAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLK------- 3300
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
N PQ+V SL+ + + + H AL+ +G +YA+G +GQLG+
Sbjct: 3301 -NRSNPQVVPSLEGLFIEDIAVGC-------EHVLALSSTGDVYAWGCNSEGQLGL 3348
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E C + + G S+ V G VY+FG L + P+ + SL+G+ I
Sbjct: 3257 EQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFI 3316
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
A G + +S G VYA+G +S E + G+ V P L+ +L+ + Q + G
Sbjct: 3317 EDIAVGCEHVLALSSTGDVYAWGCNS--EGQLGLGHCNPVKEPTLITALQGKNIKQISAG 3374
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3642
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V+SP L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3643 KLYATGYGA--GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3700
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH + P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3701 WGEAEDGKLGHGSRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 3756
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 3757 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3816
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3817 RGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3871
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3872 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3920
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 176/366 (48%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3618 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFI 3677
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3678 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGIEVVDVA 3735
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 3736 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 3794
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 3795 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKID--SLTGLGVVKVECGSQFSVALT 3851
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3852 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3911
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ T T
Sbjct: 3912 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPTS 3961
Query: 498 SGKLYA 503
+GKL A
Sbjct: 3962 AGKLPA 3967
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 128 VIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDT----------LAPQ-LV 176
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P+ I
Sbjct: 177 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKAISA 232
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 233 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 292
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 293 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 344
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 345 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 379
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 26/357 (7%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2594 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2653
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 278
G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++ G
Sbjct: 2654 CGEATNGRLGLGL-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G G+
Sbjct: 2713 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 2768
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 396
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 2769 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E +VP+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 2827 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS------- 2879
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 2880 -DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 2928
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S +G+VY A+ D+ +PQLV
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDTL--------------APQLV 176
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
+ L +NI + A L+ G VY++ G+ RLGH EP + G
Sbjct: 177 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGK 236
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 237 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 293
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 294 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 353
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 354 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 403
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 404 AAGST-----HCLALTEDSEVHSWGSNDQCQ 429
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2631 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAV 2690
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2691 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2747
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2748 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2806
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2807 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2862
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2863 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2922
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 2923 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2963
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 307
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 308 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 365
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 366 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 413
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAA 254
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 255 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 312
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 313 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 368
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 369 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 423
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 424 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 466
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 419 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 458
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2840 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2894
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2895 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2952
Query: 257 AIGN 260
A G+
Sbjct: 2953 ACGS 2956
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 178/344 (51%), Gaps = 31/344 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL------GHGTTEEEWRPRPIRSLQGI 197
R+ + AG S +T +G VY G NS+GQL G +E+ I ++G+
Sbjct: 72 RKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSS-DIELMEGL 130
Query: 198 ----RIIQAAA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
+++Q + GA ++++ AGQVY+ G ++ G+ G+ TK+ S LVESLK++
Sbjct: 131 PPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQ--LGLGSTKMSPSLLLVESLKHV 188
Query: 252 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V+ A+ + V+S +G ++F + +LG T PN + PH + L + +V++AA
Sbjct: 189 RVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV--ELPSPHLVRLAA 246
Query: 312 -GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G + + L GM V+S G L G+LG GSR+ P LI Q ++A G
Sbjct: 247 CGQYHTIFLT--EEGM-VFSCGKNLNGQLGLGSRSSTNVPTLIAALQ--ERPASMIACGY 301
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H VV +DG++ T+G+ G LG G+ + S P V+ L +VK + ++ G + T V+SE
Sbjct: 302 SHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSE 361
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
G+++SFGC LG D L P LV S+ + N
Sbjct: 362 SGELWSFGCNCHGQLGLGDSTD--------RLVPVLVPSMTKKN 397
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
C+ G H + VTS G VYS G N+ GQLG G+T+ + SL+ +R++ A
Sbjct: 134 CKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSA 193
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ ++++S G ++FG + G+ G + +L+ P VE V AA G +
Sbjct: 194 SCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLL--PHRVELPSPHLVRLAACGQYH 251
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ EG V++ + +LG + + P L+ L+ P IA GY + +
Sbjct: 252 TIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVP-TLIAALQERPASMIACGYSHTCVVL-- 308
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+++ G G+LG G P +E + N++ V ++ G V+ + G +
Sbjct: 309 -EDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLR--NVKVVKISCGTHFTCVLSESGEL 365
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
++G +G LG G+ VP +V ++ +A G + +S
Sbjct: 366 WSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G G+LGH + ++ L++ + + V VAAG+ + + ++G+V G
Sbjct: 42 VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRI--VKVAAGSETSYFLTEEGKVYCCGL 99
Query: 388 GRYGCL------GHGN--EECESVPKVVQALN-DVKAIHVA--TGDYTTFVVSEDGDVYS 436
G L G N +E S ++++ L D K + V+ G VV+ G VYS
Sbjct: 100 NSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYS 159
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFA 494
GC LG + ++P L V SLK V RV+ S + H+
Sbjct: 160 CGCNNHGQLGLGSTK----------MSPSLLLVESLKHV--RVLSASCSYH-----HSVV 202
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
++ G ++FG D GQLGI NQ P RV++
Sbjct: 203 VSSDGSAFSFGLNDCGQLGIGTRPNQLL---PHRVEL 236
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
D V G R G LGH + +VQ+L + + VA G T++ ++E+G VY G
Sbjct: 39 DCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG 98
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ L G NR + + + +VVQ+S N H +T +
Sbjct: 99 LNSTGQLARET-HQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGA---EHVLVVTSA 154
Query: 499 GKLYAFGAGDKGQLGI 514
G++Y+ G + GQLG+
Sbjct: 155 GQVYSCGCNNHGQLGL 170
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4007 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4120
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4181 RGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4235
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4236 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKID--SLTGLGVVKVECGSQFSVALT 4215
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4326 AGKLPA 4331
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGD 3182
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287
Query: 510 GQLG 513
GQ G
Sbjct: 3288 GQQG 3291
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 151/283 (53%), Gaps = 37/283 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
++ V+++ + + ALT+ G++Y++G GD +LG+
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLGL 692
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LG +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGLGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGTRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLG TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGLGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LG G+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGLGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK G+ + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGD--NQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L++ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 2815
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG +Y+
Sbjct: 2816 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYS 2873
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L + VV IAAG + AC + +Y+ G G
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELYTWGKG 2929
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGHG D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 2930 RYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 2989
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2990 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3044
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3045 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3093
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 1759 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTA 1818
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V
Sbjct: 1819 EGKVYACGEATNGRLGLGL-SSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 1877
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 1878 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 1933
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P+L++ LL + V VA G+ A + +G V +WG G +
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 1991
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 2050
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+TE+G+++A+G D G
Sbjct: 2051 -------DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTETGQVFAWGDNDHG 2096
Query: 511 QLG 513
Q G
Sbjct: 2097 QQG 2099
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 174/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 2800 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGG 2859
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G++Y++G+ G+ +G + P+++ESL+ + VV A G +A +
Sbjct: 2860 KHCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACI 2917
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ V+ +A G L M
Sbjct: 2918 TASGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGHRVIDVACGSGDAQTLCLTDDDM 2976
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 2977 -VWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3033
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3034 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3093
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ T T +GKL A
Sbjct: 3094 -----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTNAGKLPA 3140
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT++G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 1802 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAV 1861
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 1862 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 1919
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +Y++ G RLGH + P L+ L VVQ+A G LA
Sbjct: 1920 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVVQVACGSRDAQTLALT 1978
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
GM V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 1979 DEGM-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2034
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P++V+ L K +HVA G V+E G V+++G
Sbjct: 2035 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWG 2091
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 1863 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 1922
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y++G +G +G T+L P+LV+ L VVQ A G + T L+ E
Sbjct: 1923 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVVQVACGSRDAQTLALTDE 1980
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 1981 GMVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 2032
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V + G+V
Sbjct: 2033 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQVFA 2089
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG +G G+G P +VQ L K VA G
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 2126
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 2011 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 2065
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + +++ GQV+A+G + G+ G T + P LV+ L+ + +
Sbjct: 2066 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2123
Query: 257 AIGN 260
A G+
Sbjct: 2124 ACGS 2127
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 25/363 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S VV S+G GQLGHG T++ P + +L G II GA TM
Sbjct: 21 AGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMA 80
Query: 212 ISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++G+ VY++G FG +G L+ P +++L+ + + Q A G+ ++ +
Sbjct: 81 RSESGRDVYSWGWGDFGRLGHGDHSDLLI--PHPIKALQGLMIQQIACGDSHCLAVTMDS 138
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V ++ + LG T + + P + E IP+ +AAG + +A+ + +Y
Sbjct: 139 QVLSWGRNQNGELGLGTAEDSLLPQKIQ-IFEEIPIKMVAAGAEHSVAITKDGN---LYG 194
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P E+ + + +VA G H V G + T GWG+Y
Sbjct: 195 WGWGRYGNLGLGDRNDRLLP---EKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKY 251
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP+ VQAL+D V+ G + ++ G + +G + +G
Sbjct: 252 GQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNN 311
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D S QVN Q S W HT A+TE +Y++G G G
Sbjct: 312 FD--------------CCSPMQVNFPHDQKVQMISCGWR-HTIAVTERENVYSWGRGANG 356
Query: 511 QLG 513
QLG
Sbjct: 357 QLG 359
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R++ +AGA ++ + V ++G+ G+ +G +L P + +L ++
Sbjct: 15 RVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF--PTKLSALDGQDIICVT 72
Query: 258 IGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S GR VY++ WG+ RLGH + + PHP+ L+ + + QIA G +
Sbjct: 73 CGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIK-ALQGLMIQQIACGDSHC 131
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ V S G G+LG G+ D P+ I+ F+ + ++ +VAAGA H+ +
Sbjct: 132 LAVTMDSQ---VLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIK--MVAAGAEHSVAI 186
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ +P+ V D A+ VA G T VS G +Y+
Sbjct: 187 TKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAM-VACGWRHTICVSSSGGLYT 245
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G G+ LGH D L P+ V +L ++ + Q+S W H+ ALT
Sbjct: 246 NGWGKYGQLGHGDFED--------HLVPRKVQALS--DKFISQVSGG----WR-HSMALT 290
Query: 497 ESGKLYAFGAGDKGQLGI 514
SG+L +G GQ+G+
Sbjct: 291 SSGQLLGWGWNKFGQIGV 308
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT V S+G N +G+LG GT E+ P+ I+ + I I AAGA
Sbjct: 123 QIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEH 182
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I+ G +Y +G +G G + +L+ V+ K V A G T +S
Sbjct: 183 SVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMV---ACGWRHTICVSS 239
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT WG +LGH + + P + L + + Q++ G+ + +AL S +
Sbjct: 240 SGGLYTNGWGKYGQLGHGDFEDHLVPRKVQ-ALSDKFISQVSGGWRHSMALT---SSGQL 295
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
G G++G G+ D P Q + Q V + + W H V + V +WG
Sbjct: 296 LGWGWNKFGQIGVGNNFDCCSPM---QVNFPHDQKVQMISCGWRHTIAVTERENVYSWGR 352
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG+G +VP +++A +
Sbjct: 353 GANGQLGNGETIDRNVPTIIEAFS 376
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ ++AG + +AL SG V S G G G+LGHG D P + L+ Q ++
Sbjct: 16 VLLVSAGASHSVALL---SGNVVCSWGRGEDGQLGHGDTDDRLFP---TKLSALDGQDII 69
Query: 366 -VAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
V GA H + GR V +WGWG +G LGHG+ +P ++AL + +A GD
Sbjct: 70 CVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDS 129
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
V+ D V S+G ++ LG D L PQ + +++ ++V
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELGLGTAEDS--------LLPQKIQIFEEIPIKMVAAGA- 180
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
H+ A+T+ G LY +G G G LG+ ++ +R PE+V +D
Sbjct: 181 ------EHSVAITKDGNLYGWGWGRYGNLGL---GDRNDRLLPEKVTVD 220
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4025 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 4083 KLGHGNRSPCDRPR-VIESLRGTEVVDIAAGGAHS---ACITAAGELYTWGKGRYGRLGH 4138
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4139 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4198
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L V V G + +++ G VY++G G+ LGH + +V
Sbjct: 4199 KVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4250
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4251 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4295
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 40/293 (13%)
Query: 231 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G+ G K V+ P E+L N+ V Q A +LSR G++YT ++ N
Sbjct: 428 WGLLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN-------- 479
Query: 288 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
N + P + G L + +V+IAA G YL A ++S GCG GG+LGHG
Sbjct: 480 --NTLGPQLVQG-LASRNIVKIAAHPDGQHYLALSATS----ELFSWGCGDGGRLGHGDT 532
Query: 345 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+ P+L+ + Q + +A G+ ++A + DG + TWG G YG LGHG+ E ++
Sbjct: 533 VSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQT 592
Query: 403 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
VP +V L +K + V+ +GD T V+E+G V+S+G G+ LG +DG
Sbjct: 593 VPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGG-SDG------- 644
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP+L+ L+ ++ +V++ + + A+T+ G++Y++G GD +LG
Sbjct: 645 CKTPKLIEKLQDLD--IVKVRCGSQF-----SIAITKDGQVYSWGKGDNQRLG 690
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4059 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSAC 4118
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG++Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4119 ITAAGELYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4176
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V ++ G + +AL SG AVY
Sbjct: 4177 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGVGVTKVECGSQFSVALT--KSG-AVY 4232
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4233 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4291 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4330
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 164/339 (48%), Gaps = 18/339 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3993 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4052
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ VV A
Sbjct: 4053 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDIA 4110
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4111 AGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4169
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L + V G+ + +
Sbjct: 4170 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGVGVTKVECGSQFSVALT 4226
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4227 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4286
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 474
G + LG DG N + P+LV +L K++N
Sbjct: 4287 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKIN 4317
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P +L + + Q A +++S G++Y A+ ++ G PQLV
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLG--------------PQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A LS ++++ G+ RLGH + EP L G
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
V+ IA G Y A+ +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 548 QTGKQVIHIACGSTYSAAITADGE---LYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+++ L+ ++VV +
Sbjct: 665 GSQFSIAITKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKIMNGLQ--GKKVVDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
++ ++ H ALTESG++Y++G+ D+ Q
Sbjct: 715 AVGST-----HCLALTESGEVYSWGSNDQCQ 740
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 168/360 (46%), Gaps = 25/360 (6%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3019
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 278
G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V+++ G
Sbjct: 3020 CGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3078
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G G G+
Sbjct: 3079 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGR 3134
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 396
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E ++P+ ++ LN + G + +++ G V+++ +
Sbjct: 3193 GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCL--------AVXF 3244
Query: 457 RHANVLTPQLVTSLKQVNERVV---QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ N L L L +V+ R V Q T + Y+ + + S K+YA+G D GQ G
Sbjct: 3245 YYXNYL---LELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQG 3301
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 114/182 (62%), Gaps = 8/182 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T+ G +Y++G + G+LGHG++E++ P + L+G++++ + G+G +T+
Sbjct: 559 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ ++++G
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+VY++ G++ RLGH TE + P ++ L+ VV +A G + LAL SG VYS
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-IMNGLQGKKVVDVAVGSTHCLALT--ESG-EVYS 732
Query: 331 VG 332
G
Sbjct: 733 WG 734
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ----GIRIIQAAAGAGRTML 211
H +A+++ ++S+G G+LGHG T P+ + +L G ++I A G+ +
Sbjct: 506 HYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS--RE 269
I+ G++Y +G+ ++G +G + T P LV LK + VV + G+ LS
Sbjct: 566 ITADGELYTWGRGNYGRLGHGSSEDQ--TVPMLVTGLKGLKVVDVSCGSGDAQTLSVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +A+ VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIAIT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+++ Q + V VA G+ H + + G V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKIMNGLQ--GKKVVDVAVGSTHCLALTESGEVYSWG--- 734
Query: 390 YGCLGHGNEECE---------SVPKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ VP V+ L+ + ++ G +F S
Sbjct: 735 ------SNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQSFAWS 777
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3959 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTADG 4017
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4018 K---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G LGHGN P+V+++L + + +A G + ++ G++Y++G G
Sbjct: 4075 SWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYG 4134
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D L P+LV +L+ RV+ I+ + +A T LT+ +++
Sbjct: 4135 RLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVWS 4181
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4182 WGDGDYGKLG 4191
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG+ G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSG 3228
Query: 271 RVYTF 275
V+T+
Sbjct: 3229 VVWTW 3233
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT++G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2997 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3114 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3172
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3173 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQAVCQIECGAQFSLALTKSG 3228
Query: 381 RVCTWGWGRYGCLG 394
V TW ++ CL
Sbjct: 3229 VVWTWXXTKH-CLA 3241
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G +++VT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 612 SGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ GQVY++GK +G + + V P+++ L+ VV A+G+ L+ G
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTE--EHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
VY SWG++ + H +P P +L L++ +V I+ G
Sbjct: 730 VY--SWGSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCG 769
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 404 PKVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
P++VQ L + +A G + +S +++S+GCG+ LGH +
Sbjct: 484 PQLVQGLASRNIVKIAAHPDGQHY-LALSATSELFSWGCGDGGRLGHGDTV--------S 534
Query: 461 VLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
+ P+LV++L KQ ++V+ I+ ++ ++ A+T G+LY +G G+ G+LG
Sbjct: 535 LEEPKLVSALSGKQTGKQVIHIACGST-----YSAAITADGELYTWGRGNYGRLGHGSSE 589
Query: 519 NQT 521
+QT
Sbjct: 590 DQT 592
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4008 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4121
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q ++ V +G + D V +WG G YG LG
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4236
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4237 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288
Query: 511 QLG 513
Q G
Sbjct: 3289 QQG 3291
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4110 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHHVVDVACGSGDAQTL-CLTDDD 4167
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4168 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4286 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4332
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3944
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V+SP L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3945 KLYATGYGA--GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4002
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH + P ++ +L + VV +AAG + AC + +Y+ G G
Sbjct: 4003 WGEAEDGKLGHGSRSPCDRPR-VIESLRGVEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4058
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4059 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4118
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4119 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4173
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4174 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4222
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3929 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGG 3988
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ + VV A G +A +
Sbjct: 3989 KHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGVEVVDVAAGGAHSACV 4046
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4047 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4104
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4105 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4162
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4163 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4222
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ T T +GKL A
Sbjct: 4223 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPTSAGKLPA 4269
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 178/357 (49%), Gaps = 26/357 (7%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VYA
Sbjct: 2896 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2955
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 278
G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++ G
Sbjct: 2956 CGEATNGRLGLGI-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G G+
Sbjct: 3015 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 3070
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 396
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3071 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3128
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E +VP+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3129 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS------- 3181
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 3182 -DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3230
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2933 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAV 2992
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2993 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3049
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3050 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3108
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3109 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 3164
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3165 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3224
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3225 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3265
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 137/282 (48%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR G VYT ++ +D + P L+
Sbjct: 370 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDT----------LAPQ-LV 418
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 419 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 474
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G Y L HG + ++ L+
Sbjct: 475 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQ 534
Query: 414 KAIHVATGDY--TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I+ + G T E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 535 KFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 586
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 587 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 621
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 43/333 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G VY A+ D+ +PQLV
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDTL--------------APQLV 418
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 419 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 478
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G +L HG + LI L
Sbjct: 479 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYXRLDHGRSA--MNEILIMISGLDR 533
Query: 361 LQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
+ + + G A + ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 534 QKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKV 593
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+
Sbjct: 594 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVI 643
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
++ ++ H ALTE +++++G+ D+ Q
Sbjct: 644 DVAAGST-----HCLALTEDSEVHSWGSNDQCQ 671
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G +S A+T++G +Y++G + +L HG + I L + I + G +T+
Sbjct: 490 GSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTL 549
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 550 AFYENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 607
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 608 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 655
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3142 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3196
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3197 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3254
Query: 257 AIGN 260
A G+
Sbjct: 3255 ACGS 3258
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
++A G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++ ++
Sbjct: 546 AQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 605
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ + V+
Sbjct: 606 DGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH- 662
Query: 275 FSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
SWG++ + H +P P L L+ +V IA G
Sbjct: 663 -SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 700
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G SIA+T G VYS+G + +LGHGT E P+ + LQG ++I AAG+ + +
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655
Query: 213 SDAGQVYAFGKD 224
++ +V+++G +
Sbjct: 656 TEDSEVHSWGSN 667
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4014
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4015 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4072
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4073 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4128
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q ++ V +G + D V +WG G YG LG
Sbjct: 4129 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4188
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4189 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4243
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4244 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4292
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2958 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3017
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3018 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3076
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3077 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3132
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3133 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3190
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3191 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3249
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3250 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3295
Query: 511 QLG 513
Q G
Sbjct: 3296 QQG 3298
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3999 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4058
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4059 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4116
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4117 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHHVVDVACGSGDAQTL-CLTDDD 4174
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4175 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4232
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4233 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4292
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4293 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4339
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 3001 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3060
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3061 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3117
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3118 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3176
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3177 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3232
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3233 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3292
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3293 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3333
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3210 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3264
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3265 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3322
Query: 257 AIGN 260
A G+
Sbjct: 3323 ACGS 3326
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4008 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4121
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4236
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4237 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +++IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288
Query: 511 QLG 513
Q G
Sbjct: 3289 QQG 3291
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4110 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4167
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4168 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4286 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4332
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 809
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 810 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 867
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 868 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 923
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 924 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 983
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 984 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 1038
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 1039 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 1087
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 794 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 853
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 854 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 911
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 912 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 969
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 970 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 1027
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 1028 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 1087
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 1088 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 1134
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 10/173 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 23 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 82
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 83 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 140
Query: 271 RVYT---FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
V+T ++WG++ + G+ T + +P L+ LE + ++A G + +A
Sbjct: 141 VVWTWQVYAWGDNDHGQQGNGTTTVNRKP-TLVQGLEGQKITRVACGSSHSVA 192
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
PRLIE + ++ + A G+ H+A + G + TWG G YG LGHG+ + PK+V+
Sbjct: 6 PRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 63
Query: 410 LNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
L + I VA G D T ++++G V+S+G G+ LG G+ N+ PQ +
Sbjct: 64 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNI 115
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESG-----KLYAFGAGDKGQLG 513
L + V QI + ALT+SG ++YA+G D GQ G
Sbjct: 116 ERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWQVYAWGDNDHGQQG 159
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P+L+E+LK + A G+ +A L+ G +YT+ G RLGH ++P ++ L
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVL 64
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
V+Q+A G LA G+ V+S G G GKLG G P+ IE+ LN
Sbjct: 65 LGHRVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNG 120
Query: 362 QPVV-VAAGAWHAAVVGQDGRVCTW---GWG--RYGCLGHGNEECESVPKVVQALNDVKA 415
Q V + GA + + + G V TW WG +G G+G P +VQ L K
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 180
Query: 416 IHVATG 421
VA G
Sbjct: 181 TRVACG 186
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGV-----VYSFGSNSSGQLGHGTTEEEWRPRPI 191
L G+ C+ E G S+A+T GV VY++G N GQ G+GTT +P +
Sbjct: 118 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLV 172
Query: 192 RSLQGIRIIQAAAGAGRTM 210
+ L+G +I + A G+ ++
Sbjct: 173 QGLEGQKITRVACGSSHSV 191
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4010 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYS 4067
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV IAAG + AC + +++ G G
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDIAAGGAHS---ACITAAGDLFTWGKG 4123
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGHG D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4184 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4238
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4239 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3245
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3246 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3291
Query: 511 QLG 513
Q G
Sbjct: 3292 QQG 3294
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D+ G PQLV
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+SL +NI + A LS G V+++ G+ RLGH EP L G
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ LK ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V+ P E L N+ V+Q A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P++I
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 18/364 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4218
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4278
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4279 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--N 4328
Query: 498 SGKL 501
+GKL
Sbjct: 4329 AGKL 4332
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3286
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 725
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECE 401
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 257 AIGN 260
A G+
Sbjct: 3319 ACGS 3322
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L NL + VA ++ ++GRV T + LG P++VQ+L +
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 473
+A + + +S +G+V+S+GCG+ LGH + P+++++L KQ
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKMISALSGKQA 550
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
+ VV I+ ++ ++ A+T G+LY +G G+ G+LG +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G + ++ G
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADG 3756
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3757 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3814
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3815 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 3870
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 3871 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3930
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3931 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3985
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3986 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4034
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2702 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2761
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2762 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2820
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2876
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 2935 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 2993
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 2994 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3039
Query: 511 QLG 513
Q G
Sbjct: 3040 QQG 3042
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G +AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3741 QLIGGEQTLLAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3800
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3801 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 3858
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 3859 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 3916
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3917 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3974
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3975 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4034
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4035 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4081
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 145/282 (51%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P + L N+ V Q A ++ R GRV T ++ +D + L+
Sbjct: 416 VIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTLVPQ-----------LV 464
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + VV+IAA G+ YL ALA VYS GCG G +LGHG + P++I
Sbjct: 465 QGLASRNVVKIAAHSDGHHYL-ALAATGE---VYSWGCGDGRRLGHGDTVPLEEPKVISA 520
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 521 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 632
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 633 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 667
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 41/332 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P + L + + Q A R +++ G+V A+ D+ PQLV
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTL--------------VPQLV 464
Query: 246 ESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLG 299
+ L + VV+ A G+ + A L+ G VY++ G+ RLGH EP G
Sbjct: 465 QGLASRNVVKIAAHSDGHHYLA-LAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSG 523
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 524 KQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVR 640
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVID 690
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
++ ++ H ALTE +++++G+ D+ Q
Sbjct: 691 VAAGST-----HCLALTEDSEVHSWGSNDQCQ 717
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2745 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2804
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2805 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2861
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2862 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2920
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2921 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2976
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2977 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3036
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3037 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 595
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 596 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 653
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 654 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 701
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G +LGHG T P+ I + G + ++ A G+ +
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 542
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 600
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 656
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 657 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 711
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 707 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 746
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2954 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3008
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3009 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3066
Query: 257 AIGN 260
A G+
Sbjct: 3067 ACGS 3070
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 27/380 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S VV S+G GQLGHG T++ P + +L +I A GA T+
Sbjct: 20 AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLA 79
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ ++Y++G FG +G L+ PQ + +L+ + + Q A G+ ++ EG
Sbjct: 80 YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 137
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + T + +P+ +AAG + +A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 193
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 251
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHGN E VP+ +QAL+D V+ G + ++ G +Y +G + G +
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK---FGQVGV 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D NV V +++VVQIS W HT A+TE ++++G G G
Sbjct: 309 GD-------NVDRCSPVQVKFPHDQKVVQISCG----WR-HTIAVTEKENVFSWGRGTNG 356
Query: 511 QLGIELVNNQTERGNPERVD 530
QLG + +R +P+ ++
Sbjct: 357 QLGH---GDTVDRNSPKIIE 373
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R++ +AGA T+ + V ++G+ G+ +G +L+ P + +L + A
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71
Query: 258 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S +Y++ WG+ RLGH + + P P++ L+ + + QIA G +
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G+ D P+ I+ FQ + ++ +VAAGA H+ +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++G + WGWGRYG LG G+ +P+ V +++ K + VA G T VS G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH D L PQ + +L ++ + Q+S W H+ ALT
Sbjct: 246 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 290
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+G LY +G GQ+G V + +R +P +V
Sbjct: 291 STGLLYGWGWNKFGQVG---VGDNVDRCSPVQV 320
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG GT+E+ P+ I++ QG+ I AAGA
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEH 181
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I++ G++Y +G +G G + + + P+ V S+ +V A G T +S
Sbjct: 182 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSS 239
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + P L L + + Q++ G+ + +AL S +
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 295
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 296 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG+ + PK+++AL+
Sbjct: 353 GTNGQLGHGDTVDRNSPKIIEALS 376
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G HS+A+TS G++Y +G N GQ+G G + P ++ +++Q + G
Sbjct: 277 SQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWR 336
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
T+ +++ V+++G+ + G+ +G T SP+++E+L
Sbjct: 337 HTIAVTEKENVFSWGRGTNGQLGHG--DTVDRNSPKIIEAL 375
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4008 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4121
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4236
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4237 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288
Query: 511 QLG 513
Q G
Sbjct: 3289 QQG 3291
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4109
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4110 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4167
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4168 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4286 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4332
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 171/357 (47%), Gaps = 23/357 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G + +G N GQLG + P P +L +R IQ G ++ G+VYA G
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGY 640
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT V+ P L+ESL+++F+ + + G LS EG VY++ G+D
Sbjct: 641 GA--GGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDG 698
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + + P ++ +L VV +A G + AC + +Y+ G G G+LGH
Sbjct: 699 KLGHGNKSSCERPR-VIESLRGKEVVDVACGGAHS---ACITASGELYTWGKGRYGRLGH 754
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+ +E ++ V +G V D V +WG G YG LG G +
Sbjct: 755 GDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGC 814
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP V L + I V G + ++ G VY++G G+ LGH +V
Sbjct: 815 KVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGT--------DDHV 866
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
P+ V +L+ ++V+ I++ + H A T++G++Y +G D+GQLG VN
Sbjct: 867 RRPKRVAALQ--GKKVICIAVG-----SLHCVACTDTGEVYTWGDNDEGQLGDGTVN 916
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 16/343 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G AVT+ G VY+ G + G+LG G T+ P + SLQ + I + +G
Sbjct: 618 QVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGG 677
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + + P+++ESL+ VV A G +A +
Sbjct: 678 KHCLALSAEGEVYSWGEGDDGKLGHGNKSS--CERPRVIESLRGKEVVDVACGGAHSACI 735
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + + P + L V +A G L C
Sbjct: 736 TASGELYTWGKGRYGRLGHGDSDDQLRPKK-VEALSGWRVRCVACGSGDAQTL-CVTDDD 793
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P ++ Q + + + V G+ + + G V TWG
Sbjct: 794 CVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGV--IRVECGSQFSVALTASGSVYTWG 851
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ PK V AL K I +A G ++ G+VY++G + LG
Sbjct: 852 KGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLG 911
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
DG N + P+LV +L+ V +++ W+
Sbjct: 912 -----DGTVN---AIHKPRLVAALQGKKINRVSCGSAHTVAWS 946
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 12/292 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++++G VYS+G G+LGHG RPR I SL+G ++ A G +
Sbjct: 675 SGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSAC 734
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGNFFTAVLSRE 269
I+ +G++Y +GK +G +G +L P+ VE+L + V G+ T ++ +
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQL--RPKKVEALSGWRVRCVACGSGDAQTLCVTDD 792
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+++ G+ +LG +D PL + L+ + V+++ G + +AL S V
Sbjct: 793 DCVWSWGDGDYGKLGRGG--SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGS---V 847
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHG+ + P+ + Q + + +A G+ H G V TWG
Sbjct: 848 YTWGKGDYHRLGHGTDDHVRRPKRVAALQ--GKKVICIAVGSLHCVACTDTGEVYTWGDN 905
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
G LG G P++V AL K V+ G T S + CG
Sbjct: 906 DEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWSTCNPSTAGACG 957
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 8/215 (3%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+E G HS +T+ G +Y++G G+LGHG ++++ RP+ + +L G R+ A
Sbjct: 720 KEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVAC 779
Query: 205 GAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
G+G +T+ ++D V+++G +G + G G+ P V+ L+ + V++ G+ F
Sbjct: 780 GSGDAQTLCVTDDDCVWSWGDGDYG--KLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQF 837
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ L+ G VYT+ G+ RLGH T+ + P + L+ V+ IA G L +AC
Sbjct: 838 SVALTASGSVYTWGKGDYHRLGHGTDDHVRRPK-RVAALQGKKVICIAVG--SLHCVACT 894
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+G VY+ G G+LG G+ PRL+ Q
Sbjct: 895 DTG-EVYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 266 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 314
++R +T SWG + H + VE P P L + +Q+ G
Sbjct: 566 VNRRPEDWTLSWGWSGTILGWGHNHRGQLGGVEGAKVKLPMP-CEALSALRPIQVVGGEQ 624
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L A+ VY+ G G GG+LG G P L+E Q + ++ VVV +G H
Sbjct: 625 TLFAVTADGK---VYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCL 681
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ +G V +WG G G LGHGN+ P+V+++L + + VA G + ++ G++
Sbjct: 682 ALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGEL 741
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G G LGH +D Q L P+ V +L R V +A T
Sbjct: 742 YTWGKGRYGRLGHGD-SDDQ-------LRPKKVEALSGWRVRCVACGSG-----DAQTLC 788
Query: 495 LTESGKLYAFGAGDKGQLG 513
+T+ ++++G GD G+LG
Sbjct: 789 VTDDDCVWSWGDGDYGKLG 807
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 261 GA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 318
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 319 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 374
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
D+ P+L+E Q + V +G + D V +WG G YG LG G +
Sbjct: 375 SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 434
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L + + V G + +++ G VY++G G+ LGH + +V
Sbjct: 435 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 486
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 487 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 531
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 238 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 297
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 298 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 355
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 356 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 413
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 414 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 471
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 472 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 531
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 532 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 578
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)
Query: 265 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 194 ILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 252
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 253 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 309
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 310 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 369
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH+ D L P+LV +L+ RVV ++ + +A T LT+ ++
Sbjct: 370 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 416
Query: 503 AFGAGDKGQLG 513
++G GD G+LG
Sbjct: 417 SWGDGDYGKLG 427
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 177/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4008
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4009 KLYATGYGA--GGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYS 4066
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH + P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4067 WGEAEDGKLGHGSRSPCDRPR-VVESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4122
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4182
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP +++L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4183 RGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4237
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4238 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4286
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 176/366 (48%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3984 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFI 4043
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P++VESL+ I VV A
Sbjct: 4044 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVVESLRGIEVVDVA 4101
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEVLQGHRVVDVACGSGDAQ 4160
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P IE L L V V G+ + +
Sbjct: 4161 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLTGLGVVKVECGSQFSVALT 4217
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4218 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4277
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ T +
Sbjct: 4278 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPSS 4327
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4328 AGKLPA 4333
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 28/366 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S AV +K V+ +G N QLG + P +L + ++Q A G+
Sbjct: 2952 AGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3009
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
++ G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +
Sbjct: 3010 VTVEGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3068
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+D +LGH + N +P L+ L + IA G + AL S +Y
Sbjct: 3069 GKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALRAKRIRDIACGSSHSAALT---SSGELY 3124
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGW 387
+ G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG
Sbjct: 3125 TWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G +G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ +V PQ+V L+ +++V +++ H A+T+SG++YA+G
Sbjct: 3243 GS--------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDN 3287
Query: 508 DKGQLG 513
D GQ G
Sbjct: 3288 DHGQQG 3293
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 148/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA V+S GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLE--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G V+++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QGGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D++ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPRLLEGLH--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2996 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3055
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+L+ + A G+
Sbjct: 3056 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRAKRIRDIACGSS 3112
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3113 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3171
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3172 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3227
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3228 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3287
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3288 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3328
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPR-LLEGLHGKKVIDVAAGSTHCLAL 725
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G V+S+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLEVVKVRCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++PRL+E + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3205 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3259
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3260 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3317
Query: 257 AIGN 260
A G+
Sbjct: 3318 ACGS 3321
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 353
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 354 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 411
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 412 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 467
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 527
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 528 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 582
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 583 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 631
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 338 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 397
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 398 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 455
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ V+ IA G L C
Sbjct: 456 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQTL-CLTDDD 513
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 514 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 571
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 572 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 631
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 632 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 678
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 1538 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 1597
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 1598 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 1655
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 1656 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 1711
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 1712 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1771
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 1772 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 1826
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 1827 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 1875
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 543 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 602
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 603 EGKVYACGEATNGRLGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 661
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 662 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 717
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 718 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 775
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 776 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 834
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 835 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 880
Query: 511 QLG 513
Q G
Sbjct: 881 QQG 883
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 1582 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 1641
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 1642 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 1699
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 1700 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 1757
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 1758 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 1815
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 1816 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 1875
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 1876 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 1922
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 586 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 645
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 646 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 702
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 703 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 761
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 762 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 817
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 818 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 877
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 878 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 918
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 795 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 849
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 850 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 907
Query: 257 AIGN 260
A G+
Sbjct: 908 ACGS 911
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3984
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3985 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4042
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4043 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4098
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4099 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4158
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4159 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4213
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4214 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4262
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 417 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 465
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +++IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 466 QGLASRNIIKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 521
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 522 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 581
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 582 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 633
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 634 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 668
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2928 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2987
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2988 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3046
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3047 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3102
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3103 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3160
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3161 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3219
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3220 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3265
Query: 511 QLG 513
Q G
Sbjct: 3266 QQG 3268
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3969 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4028
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4029 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4086
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4087 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4144
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4145 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4202
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4203 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4262
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4263 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4309
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 465
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 466 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 525
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 526 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 582
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 583 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 642
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 643 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 692
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 693 AAGST-----HCLALTEDSEVHSWGSNDQCQ 718
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2971 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3030
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3031 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3087
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3088 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3146
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3147 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3202
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3203 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3262
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3263 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3303
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 537 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 596
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 597 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 654
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 655 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 702
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 543
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 544 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 601
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 602 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 657
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 658 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 712
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 713 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 755
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 708 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 747
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3180 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3234
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3235 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3292
Query: 257 AIGN 260
A G+
Sbjct: 3293 ACGS 3296
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 982 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 1041
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 1042 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 1099
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 1100 WGEAKDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 1155
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 1156 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1215
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 1216 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 1270
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 1271 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 1319
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 1017 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 1076
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 1077 KKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 1134
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 1135 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 1193
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 1194 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 1250
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 1251 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 1310
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 1311 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 1360
Query: 498 SGKLYA 503
+GKL A
Sbjct: 1361 AGKLPA 1366
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 173/348 (49%), Gaps = 26/348 (7%)
Query: 170 GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 229
G N QLG + P +L + ++Q A G+ ++ G+VY+ G+ + G
Sbjct: 1 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 287
G+ + V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH +
Sbjct: 61 GLGMS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 119
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
N +P L+ L+ + IA G + AL S +Y+ G G G+LGHG T +
Sbjct: 120 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 175
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 405
P++++ LL + + VA G+ A + +G V +WG G +G LG G E ++P+
Sbjct: 176 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 233
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++ LN + G + +++ G V+++G G+ LGH + +V PQ
Sbjct: 234 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 285
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 286 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 326
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 29 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 88
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 89 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 145
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 146 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 204
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 205 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 260
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 261 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 320
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 321 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 238 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 292
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 293 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 350
Query: 257 AIGN 260
A G+
Sbjct: 351 ACGS 354
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 27/380 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S VV S+G GQLGHG T++ P + +L +I A GA T+
Sbjct: 20 AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLA 79
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ ++Y++G FG +G L+ PQ + +L+ + + Q A G+ ++ EG
Sbjct: 80 YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 137
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + T + +P+ +AAG + +A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAIT---ENGELYG 193
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 251
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHGN E VP+ +QAL+D V+ G + ++ G +Y +G + G +
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK---FGQVGV 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D NV V +++VVQIS W HT A+TE ++++G G G
Sbjct: 309 GD-------NVDRCSPVQVKFPHDQKVVQISCG----WR-HTIAVTEKENVFSWGRGTNG 356
Query: 511 QLGIELVNNQTERGNPERVD 530
QLG + +R +P+ ++
Sbjct: 357 QLGH---GDTVDRNSPKIIE 373
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R++ +AGA T+ + V ++G+ G+ +G +L+ P + +L + A
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71
Query: 258 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S +Y++ WG+ RLGH + + P P++ L+ + + QIA G +
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G+ D P+ I+ FQ + ++ +VAAGA H+ +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++G + WGWGRYG LG G+ +P+ V +++ K + VA G T VS G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH D L PQ + +L ++ + Q+S W H+ ALT
Sbjct: 246 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 290
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+G LY +G GQ+G V + +R +P +V
Sbjct: 291 STGLLYGWGWNKFGQVG---VGDNVDRCSPVQV 320
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG GT+E+ P+ I++ QG+ I AAGA
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEH 181
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I++ G++Y +G +G G + + + P+ V S+ +V A G T +S
Sbjct: 182 SVAITENGELYGWGWGRYGNLGLGDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSS 239
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + P L L + + Q++ G+ + +AL S +
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLL 295
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 296 YGWGWNKFGQVGVGDNVDRCSPV---QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG+ + PK+++AL+
Sbjct: 353 GTNGQLGHGDTVDRNSPKIIEALS 376
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G HS+A+TS G++Y +G N GQ+G G + P ++ +++Q + G
Sbjct: 277 SQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWR 336
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
T+ +++ V+++G+ + G+ +G T SP+++E+L
Sbjct: 337 HTIAVTEKENVFSWGRGTNGQLGHG--DTVDRNSPKIIEAL 375
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 173/372 (46%), Gaps = 25/372 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + V+ ++G GQLGHG E+ P I I GA T
Sbjct: 21 AGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTA 80
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D QVY++G FG +G + V +PQ V++L+ I + Q A G+ ++ G
Sbjct: 81 YSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAG 138
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + E I V IAAG + A+ +Y
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISVKMIAAGAEHTAAVTEDGD---IYG 194
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLVACGWRHTITVSSSGSLYTYGWSKY 252
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP V+AL D ++ G T ++ DG +Y +G + +G
Sbjct: 253 GQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG---- 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+A+ +P V ++ ++V Q++ W HT A TE ++A+G G G
Sbjct: 309 ----AGDNADHCSPAQVNFPEE--QKVAQVACG----WR-HTLAFTEKKNVFAWGRGTSG 357
Query: 511 QLGI-ELVNNQT 521
QLG E+V+ T
Sbjct: 358 QLGHGEIVDRNT 369
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 152/316 (48%), Gaps = 24/316 (7%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + + +G+ G+ +G +LV P ++ +
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G + TA E +VY++ WG+ RLGH + P P+ L+ I + Q+A G + L
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A+ V S G G+LG G+ D P+ I+ F+ ++++ ++AAGA H A V
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG + WGWGRYG LG G+ VP+ V ++ K + VA G T VS G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH D L P V +LK + QIS W HT ALT
Sbjct: 248 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSSTSQISGG----WR-HTMALTS 292
Query: 498 SGKLYAFGAGDKGQLG 513
GKLY +G GQ+G
Sbjct: 293 DGKLYGWGWNKFGQVG 308
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ +GI + AAGA
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + + V P+ V S++ +V A G T +S
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSS 240
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH + L++ QI+ G+ + +AL S +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 296
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q Q V A W H + V WG
Sbjct: 297 YGWGWNKFGQVGAGDNADHCSP---AQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGR 353
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG + P ++ AL+
Sbjct: 354 GTSGQLGHGEIVDRNTPVIIDALS 377
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3751
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3752 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3809
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3810 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 3865
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 3866 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3925
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3926 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3980
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3981 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4029
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3736 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3795
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3796 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 3853
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 3854 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 3911
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3912 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3969
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3970 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4029
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4030 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4076
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 32/366 (8%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+S+G N QLG ++ P +L + ++Q A G+ ++
Sbjct: 2701 GLESAATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2760
Query: 215 AGQVYAFGKDSFGEAE-YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VYA G+ + A G+ + + +L + V + A+ G T +G+
Sbjct: 2761 EGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGK 2820
Query: 272 VYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+++ G+D +LGH + P +E L+ + IA G + AL S +Y+
Sbjct: 2821 VFSWGEGDDGKLGHFSRMPRLIE------ALKTKRIRDIACGSSHSAALT---SSGELYT 2871
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWG 388
G G G+LGHG T + P++++ LL + + VA G+ A + +G V + G G
Sbjct: 2872 WGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDG 2929
Query: 389 RYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+G G E + ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2930 DLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2989
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ +V PQ+V L+ +++V S + ++ H A+T+SG++YA+G
Sbjct: 2990 GS--------DVHVRKPQVVEGLR--GKKIVACSCSGAL----HCLAVTDSGQVYAWGDN 3035
Query: 508 DKGQLG 513
D GQ G
Sbjct: 3036 DHGQQG 3041
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 14/211 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 2856 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2915
Query: 211 LISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++D G V++ G + G V+G + PQ +E L V Q G F+ L++
Sbjct: 2916 ALTDEGLVFSLGDGDLWKIGPGPEVKGCNI---PQNIERLNGQGVCQIECGAQFSLALTK 2972
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY--LLALACQPSGM 326
G V+T+ G+ RLGH ++ + +P +E + +I A C L LA SG
Sbjct: 2973 SGVVWTWGKGDYFRLGHGSDVHVRKPQ----VVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
VY+ G G+ G+G+ T + P L++ +
Sbjct: 3029 -VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3058
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 157/357 (43%), Gaps = 38/357 (10%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQ-----LGHGTTEEEWRPRP---IRSLQG- 196
N +AG S+ AVT +G VY+ G + + GT P P I +L
Sbjct: 2744 NVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTV-----PIPHGXITALSSY 2798
Query: 197 -IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
++ + +G +T G+V+ S+GE + G G P+L+E+LK +
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVF-----SWGEGDDGKLG-HFSRMPRLIEALKTKRIRD 2852
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ +A L+ G +YT+ G RLGH ++P ++ L V+Q+A G
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRD 2911
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
LA G+ V+S+G G K+G G K + + + LN Q V + GA +
Sbjct: 2912 AQTLALTDEGL-VFSLGDGDLWKIGPGPEV--KGCNIPQNIERLNGQGVCQIECGAQFSL 2968
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA-TGDYTTFVVSEDGD 433
+ + G V TWG G Y LGHG++ P+VV+ L K + + +G V++ G
Sbjct: 2969 ALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
VY++G + QGN V P LV L+ V ++S+ W
Sbjct: 3029 VYAWGDNDHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3076
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2952 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3006
Query: 197 IRIIQ-AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
+I+ + +GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3007 KKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITR 3064
Query: 256 AAIGN 260
A G+
Sbjct: 3065 VACGS 3069
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3641 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3700
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3701 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3758
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3759 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 3814
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 3815 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3874
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3875 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3929
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3930 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3978
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2646 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2705
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2706 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2764
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 2765 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2820
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2821 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2878
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 2879 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 2937
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 2938 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 2983
Query: 511 QLG 513
Q G
Sbjct: 2984 QQG 2986
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3685 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3744
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3745 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 3802
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 3803 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 3860
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3861 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3918
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3919 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3978
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 3979 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4025
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2689 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2748
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2749 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2805
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2806 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2864
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2865 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2920
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2921 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2980
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 2981 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3021
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 442
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ YL ALA VYS GCG GG+LGHG + P++I
Sbjct: 443 QGLASRNIVKIAAHSDGHHYL-ALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 498
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 499 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 558
Query: 414 KAIHVA--TGDYTTFVVSED 431
K I VA +GD T V+E+
Sbjct: 559 KVIDVACGSGDAQTLAVTEN 578
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2898 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2952
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2953 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3010
Query: 257 AIGN 260
A G+
Sbjct: 3011 ACGS 3014
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
+D P+L++ N+ + + H + G V +WG G G LGHG+ P
Sbjct: 434 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 493
Query: 405 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D
Sbjct: 494 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 547
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
P LV LK + +V+ ++ + +A T A+TE+
Sbjct: 548 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTEN 578
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 442
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 443 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 502
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 559
Query: 361 LQPVVVAAG 369
+ V +G
Sbjct: 560 VIDVACGSG 568
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 520
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+
Sbjct: 521 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGS 567
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 39/55 (70%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G
Sbjct: 514 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 568
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 27/160 (16%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L NL +A ++ ++GRV T + N + + P++VQ L +
Sbjct: 403 LANLGVTQIACAEKRFLILSRNGRVYTQAY---------NSDTLA-PQLVQGLASRNIVK 452
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 473
+A + + ++ G+VYS+GCG+ LGH + P+++++ KQ
Sbjct: 453 IAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE--------EPKVISAFSGKQA 504
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ VV I+ ++ ++ A+T G+LY +G G+ G+LG
Sbjct: 505 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLG 539
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3999
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4000 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4057
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4058 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4113
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4114 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4173
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4174 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4228
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4229 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4277
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2945 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3004
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3005 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3063
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3064 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3119
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3120 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3177
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3178 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3236
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3237 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3282
Query: 511 QLG 513
Q G
Sbjct: 3283 QQG 3285
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3984 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4043
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4044 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4101
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4102 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4159
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4160 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4217
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4218 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4277
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4278 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4324
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2988 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3047
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3048 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3104
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3105 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3163
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3164 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3219
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3220 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3279
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3280 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3320
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3197 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3251
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3252 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3309
Query: 257 AIGN 260
A G+
Sbjct: 3310 ACGS 3313
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 275
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 276 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 333
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 334 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 389
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 449
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 450 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 504
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 505 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 553
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 260 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 319
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 320 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 377
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ V+ IA G L C
Sbjct: 378 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQTL-CLTDDD 435
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 436 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 493
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 494 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 553
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 554 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 600
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R IQ G ++ G
Sbjct: 3836 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADG 3895
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3896 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3953
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3954 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4009
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4010 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4069
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4070 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4124
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4125 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4173
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3880 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3939
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3940 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 3997
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 3998 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEVLQGHRVVDIACGSGDAQTL-CLTDDD 4055
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4056 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4113
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4114 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4173
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4174 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4220
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTLPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QGGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G LG G E ++P+ ++ LN + G + +++ G V+++
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 778
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 271 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015
Query: 330 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ L P++V L + RV+Q++ + +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182
Query: 509 KGQLG 513
G+LG
Sbjct: 3183 FGKLG 3187
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3168 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 271 RVYTF 275
V+T+
Sbjct: 3226 VVWTW 3230
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 14/245 (5%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G + G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTW 385
V TW
Sbjct: 3226 VVWTW 3230
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4008
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4009 KLYATGYGA--GGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYS 4066
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4067 WGEAEDGKLGHGNRSPCDRPR-VVESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4122
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4182
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4183 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4237
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4238 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4286
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 174/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3993 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGG 4052
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P++VESL+ I VV A G +A +
Sbjct: 4053 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGIEVVDVAAGGAHSACV 4110
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4111 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4168
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4169 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4226
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4227 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4286
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ T T +GKL A
Sbjct: 4287 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPTSTGKLPA 4333
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V Q A +LSR GRVYT ++ +DA + P L+
Sbjct: 440 VIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDA----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +++IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E +P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2952 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3011
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3012 EGKVYACGEATNGRLGLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3070
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3071 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3126
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3127 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3184
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3185 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3243
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3244 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3289
Query: 511 QLG 513
Q G
Sbjct: 3290 QQG 3292
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S +G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDAL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2995 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3054
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3055 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3111
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3112 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3170
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3171 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3226
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3227 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3286
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3287 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3327
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G +++ P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEVI--PVLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 126 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 185
G S V+ L+AG + + +G ++AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646
Query: 186 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 304
E L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 EGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTK 762
Query: 305 PVVQIAAG 312
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3204 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3258
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3259 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3316
Query: 257 AIGN 260
A G+
Sbjct: 3317 ACGS 3320
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3234 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3293
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3294 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3351
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3352 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 3407
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 3408 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3467
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3468 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3522
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3523 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 3571
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2239 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2298
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 2299 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2357
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 2358 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 2413
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2414 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2471
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 2472 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 2530
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 2531 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 2576
Query: 511 QLG 513
Q G
Sbjct: 2577 QQG 2579
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3278 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3337
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3338 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 3395
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 3396 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 3453
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3454 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3511
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 3512 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3571
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 3572 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 3618
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2282 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2341
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2342 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2398
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2399 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2457
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2458 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2513
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2514 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2573
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 2574 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2614
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2491 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2545
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2546 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2603
Query: 257 AIGN 260
A G+
Sbjct: 2604 ACGS 2607
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4035
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4036 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4093
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4094 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4149
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4150 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4209
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4210 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4264
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4265 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4313
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 4020 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4079
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4080 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4137
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4138 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4195
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4196 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4253
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4254 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4313
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4314 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4360
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4010 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4123
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4124 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4184 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4238
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4239 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4287
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2955 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3014
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3015 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3073
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3074 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3129
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3130 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3187
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3188 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3246
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3247 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3292
Query: 511 QLG 513
Q G
Sbjct: 3293 QQG 3295
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 385 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 433
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 489
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 601
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 602 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 636
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3994 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4053
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4054 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4111
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4112 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4169
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4170 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4227
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4228 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4287
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4288 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4334
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 433
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 434 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 493
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 550
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 551 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 610
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 660
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 661 AAGST-----HCLALTEDSEVHSWGSNDQCQ 686
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2998 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3057
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3058 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3114
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3173
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3229
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3230 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3289
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3290 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3330
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 565 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 622
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 670
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 625
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 680
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 681 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 723
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 676 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 715
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3207 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3261
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3262 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3319
Query: 257 AIGN 260
A G+
Sbjct: 3320 ACGS 3323
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 19/325 (5%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S I G H+ A + + + +YS+G G+LGHG + + + P+PI +LQGI+I Q A G
Sbjct: 76 SVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGD 135
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++DAGQV+++G++ G + G+ T+ PQ + + + + V A G TA +
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNG--QLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAI 193
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G +Y + WG LG + + P + ++E +V +A G+ + + ++ S
Sbjct: 194 LEDGDLYGWGWGQYGNLGLGDRNDRLVPEK-VSSVEGEKMVLVACGWRHTVTVS---SSG 249
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + AG W H V DG++ W
Sbjct: 250 DLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQI---AGGWRHTMAVAGDGKLYGW 306
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G + P V ++ K VA G T ++E+ +V+S+G G S L
Sbjct: 307 GWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQL 366
Query: 446 GHNAIADGQGNRHANVLTPQLVTSL 470
GH I D TP+++ +L
Sbjct: 367 GHGEIIDRN--------TPKMIDAL 383
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 180/384 (46%), Gaps = 34/384 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA----GAG 207
AG HS+A+ S V S+G GQLGHG E+ RP P L G + A+ GA
Sbjct: 27 AGANHSVALLSSKAVCSWGRGEDGQLGHGDAED--RPVPTL-LSGFDVPGIASVVICGAD 83
Query: 208 RTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T SD Q+Y++G FG +G + V PQ +E+L+ I + Q A G+ +
Sbjct: 84 HTTAYSDEQMQLYSWGWGDFGRLGHG--NSSDVFHPQPIEALQGIKIKQIACGDSHCLAV 141
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G+V+++ + +LG + + P + E + V IAAG + A+
Sbjct: 142 TDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIH-AFEGVCVKMIAAGAEHTAAILEDGD-- 198
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+Y G G G LG G R D P + + + V+VA G H V G + T+G
Sbjct: 199 -LYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKM--VLVACGWRHTVTVSSSGDLYTYG 255
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
W +YG LGHG+ E VP ++AL D +A G T V+ DG +Y +G + +G
Sbjct: 256 WSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVG 315
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+AD NV V + ++V Q++ W HT ALTE+ ++++G
Sbjct: 316 ---VAD-------NVDHCSPVQVIFPDEQKVAQVACG----WR-HTLALTENKNVFSWGR 360
Query: 507 GDKGQLGIELVNNQTERGNPERVD 530
G GQLG + +R P+ +D
Sbjct: 361 GTSGQLGHGEI---IDRNTPKMID 381
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 25/314 (7%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GN 260
+AGA ++ + + V ++G+ G+ +G + V P L+ + I +
Sbjct: 26 SAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVICGAD 83
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
TA + ++Y++ WG+ RLGH + P P+ L+ I + QIA G + LA+
Sbjct: 84 HTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIE-ALQGIKIKQIACGDSHCLAVT 142
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
V+S G G+LG G+ D P+ I F+ + ++ ++AAGA H A + +DG
Sbjct: 143 ---DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVK--MIAAGAEHTAAILEDG 197
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+ WGWG+YG LG G+ VP+ V ++ K + VA G T VS GD+Y++G
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWS 257
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LGH D L P + +LK + + QI+ W HT A+ GK
Sbjct: 258 KYGQLGHGDFEDH--------LVPHKLEALK--DRFISQIAGG----WR-HTMAVAGDGK 302
Query: 501 LYAFGAGDKGQLGI 514
LY +G GQ+G+
Sbjct: 303 LYGWGWNKFGQVGV 316
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V+S+G N +GQLG G TE+ P+ I + +G+ + AAGA
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEH 189
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T I + G +Y +G +G G + +LV P+ V S++ +V A G T +S
Sbjct: 190 TAAILEDGDLYGWGWGQYGNLGLGDRNDRLV--PEKVSSVEGEKMVLVACGWRHTVTVSS 247
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L++ + QIA G+ + +A+A +
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDRFISQIAGGWRHTMAVAGDGK---L 303
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G D P Q + Q V A W H + ++ V +WG
Sbjct: 304 YGWGWNKFGQVGVADNVDHCSPV---QVIFPDEQKVAQVACGWRHTLALTENKNVFSWGR 360
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG + PK++ AL+
Sbjct: 361 GTSGQLGHGEIIDRNTPKMIDALS 384
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++AG + +AL S AV S G G G+LGHG D P L+ F + + VV
Sbjct: 22 VALVSAGANHSVALL---SSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV 78
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ A + ++ +WGWG +G LGHGN P+ ++AL +K +A GD
Sbjct: 79 ICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC 138
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
V++ G V+S+G ++ LG D L PQ + + + V +++
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDS--------LLPQKIHAFEGVCVKMIAAGAE-- 188
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT A+ E G LY +G G G LG+ ++ +R PE+V
Sbjct: 189 -----HTAAILEDGDLYGWGWGQYGNLGL---GDRNDRLVPEKV 224
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3949
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3950 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4007
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4063
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4123
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4124 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4178
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4179 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4227
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2893 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2952
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 2953 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3011
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3012 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3067
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3068 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3125
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3126 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3185
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3186 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3230
Query: 510 GQLG 513
GQ G
Sbjct: 3231 GQQG 3234
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3925 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3984
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3985 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4042
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4101
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4102 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4158
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4159 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4218
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4219 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4268
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4269 AGKLPA 4274
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 385 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 433
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 489
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 601
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 602 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 636
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 433
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 434 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 493
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 550
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 551 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 610
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 660
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 661 AAGST-----HCLALTEDSEVHSWGSNDQCQ 686
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2937 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2996
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2997 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3053
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3054 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3112
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3113 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3168
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3169 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3228
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3229 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 565 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 622
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 670
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 625
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 680
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 681 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 723
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 676 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3146 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3200
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3201 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3258
Query: 257 AIGN 260
A G+
Sbjct: 3259 ACGS 3262
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4007 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4120
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4235
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4236 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3991 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4050
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4051 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ V+ IA G L C
Sbjct: 4109 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQTL-CLTDDD 4166
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4167 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4285 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4331
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 178/357 (49%), Gaps = 26/357 (7%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
T + V+ +G N QLG + P +L + ++Q A G+ ++ G+VY+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWG 278
G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++ G
Sbjct: 3017 CGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G G+
Sbjct: 3076 DDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGR 3131
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHG 396
LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3190 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS------- 3242
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 3243 -DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 778
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3989 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4106
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDD 4164
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4165 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4283 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4072
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4073 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4130
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4131 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4186
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4187 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4246
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4247 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4301
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4302 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4350
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 3016 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3075
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3076 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3134
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3135 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3190
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3191 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3248
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3249 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3308
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3309 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3353
Query: 510 GQLG 513
GQ G
Sbjct: 3354 GQQG 3357
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 4048 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4107
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4165
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4166 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4224
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4225 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4281
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4282 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4341
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4342 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4391
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4392 AGKLPA 4397
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 508 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 556
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 557 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 612
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 613 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 672
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 673 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 724
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 725 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 759
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 556
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 557 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 616
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 617 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 673
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 674 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 733
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 734 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 783
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 784 AAGST-----HCLALTEDSEVHSWGSNDQCQ 809
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 3060 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3119
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3120 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3176
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3177 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3235
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3236 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3291
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3292 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3351
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3352 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3392
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 628 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 687
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 688 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 745
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 746 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 793
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 634
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 635 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 692
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 693 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 748
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 749 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 803
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 804 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 846
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 681 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 798
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L++ +V IA G
Sbjct: 799 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 838
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3269 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3323
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3324 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3381
Query: 257 AIGN 260
A G+
Sbjct: 3382 ACGS 3385
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4118
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4233
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4234 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3009
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3010 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3124
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3241
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3242 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3287
Query: 511 QLG 513
Q G
Sbjct: 3288 QQG 3290
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4156
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4157 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4213
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4274 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4323
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4324 AGKLPA 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3285 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 257 AIGN 260
A G+
Sbjct: 3315 ACGS 3318
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 14/298 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V ++G VY+ GSN GQLG + RP I +L I Q + G +++
Sbjct: 42 GRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHK--RPTVITALDTQSIQQVSCGDYHNLVV 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D QV+++G D G+ + ++ G P++V+ L ++ +VQ A G + LS +GR
Sbjct: 100 NDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGR 159
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ FSWGN++ +LG + N +P L +L IP QI AG + L+ SG AV+
Sbjct: 160 I--FSWGNNSHGQLGIGSTKNQPKPQELT-SLTGIPFCQIVAGGSHSFVLS--KSG-AVF 213
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G D K+P ++ L +L+ ++ G H AV+ DG V T+G G
Sbjct: 214 GFGRNTFGQLGLGDTGDRKYPTHVKS--LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGS 271
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E++P+ V L ++ +A G +T V G +YSFG G + LG
Sbjct: 272 YGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 174/357 (48%), Gaps = 37/357 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
++ +G+ +G+LG G EE+ + +P + + +R + + G T+ + G VY
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMR--EVSCGRQHTVFVLAEGTVYTC 58
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND- 280
G + +G+ + K P ++ +L + Q + G++ V++ + +V FSWG D
Sbjct: 59 GSNDYGQ----LGQDKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQV--FSWGYDD 112
Query: 281 -ARLGHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+LGH E N+ ++ L ++ +VQ+A G + LAL+ + ++S G G
Sbjct: 113 CGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALS---NDGRIFSWGNNSHG 169
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LG GS ++ P+ E L + + AG H+ V+ + G V +G +G LG G+
Sbjct: 170 QLGIGSTKNQPKPQ--ELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD 227
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
P V++L +K H++ G+ T V++ DG V +FG G LGHN+ N
Sbjct: 228 TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNS------NN 281
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
H + P+ V L + + +T HT A ES G++Y+FG G GQLG
Sbjct: 282 HEAL--PRKVFEL-------MGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS+A+++ G ++S+G+NS GQLG G+T+ + +P+ + SL GI Q AG
Sbjct: 143 QVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSH 202
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++S +G V+ FG+++FG+ G G + P V+SL+++ V + G TAVL+
Sbjct: 203 SFVLSKSGAVFGFGRNTFGQLGLGDTGDR--KYPTHVKSLRSLKVTHISCGEEHTAVLTL 260
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V TF G+ +LGH++ ++ P + L + V Q+A G + +A + SG +
Sbjct: 261 DGGVLTFGAGSYGQLGHNSNNHEALPRKVF-ELMGLEVTQLACGRMHTMAYV-ESSG-RI 317
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIE 354
YS G G G+LG T+ P ++
Sbjct: 318 YSFGLGGNGQLGSKGTTNCNTPITVD 343
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 205
Q G H++ V K V+S+G + GQLGH RPR ++ L ++I+Q A G
Sbjct: 88 QVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACG 147
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ +S+ G+++++G +S G+ G+ TK PQ + SL I Q G + V
Sbjct: 148 GKHSLALSNDGRIFSWGNNSHGQL--GIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFV 205
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
LS+ G V+ F +LG + D + + +L ++ V I+ G + L
Sbjct: 206 LSKSGAVFGFGRNTFGQLG-LGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDG-- 262
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCT 384
V + G G G+LGH S E PR + F+L+ L+ +A G H A V GR+ +
Sbjct: 263 -GVLTFGAGSYGQLGHNSNNHEALPRKV--FELMGLEVTQLACGRMHTMAYVESSGRIYS 319
Query: 385 WGWGRYGCLG-HGNEECES 402
+G G G LG G C +
Sbjct: 320 FGLGGNGQLGSKGTTNCNT 338
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 151/288 (52%), Gaps = 10/288 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VYS+G G+LGHG + + + P+PI++L G+RI Q A G + ++ G+V ++G++
Sbjct: 90 VYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQ 149
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G+ G LV PQ +++ + + V A G TA ++ +G +Y + WG LG
Sbjct: 150 NGQLGLGTTEDSLV--PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL 207
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
+ + P + T+E + +V++A G+ + ++++ S +Y+ G G+LGHG
Sbjct: 208 GDRNDRLVPEKV-STVEGVKMVKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFE 263
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
D P +E Q + + +G W H + DG++ WGW ++G +G G+ P
Sbjct: 264 DHLTPHKLEALQENLISEI---SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSP 320
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
V+ ++ K +H++ G T V+E +V+S+G G + LGH D
Sbjct: 321 VQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 368
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 159/326 (48%), Gaps = 29/326 (8%)
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
P+R R++ +AGA ++ + V ++G+ G+ +G +L SP + +L
Sbjct: 14 PVR-----RVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALD 66
Query: 250 NIFVVQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
VV G T S +VY++ WG+ RLGH + P P+ L + + Q
Sbjct: 67 GHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHGLRIKQ 125
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
IA G + LA+ V S G G+LG G+ D P+ I+ FQ ++++ +VAA
Sbjct: 126 IACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAA 180
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
GA H A V +DG + WGWGRYG LG G+ VP+ V + VK + VA G T V
Sbjct: 181 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV 240
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S G +Y++G + LGH D LTP + +L++ + +IS W
Sbjct: 241 SSSGGLYTYGWSKYGQLGHGDFED--------HLTPHKLEALQE--NLISEISGG----W 286
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGI 514
HT ALT GKLY +G GQ+G+
Sbjct: 287 R-HTMALTSDGKLYGWGWNKFGQVGV 311
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 173/363 (47%), Gaps = 24/363 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S VV S+G GQLGHG E+ P + +L G ++ GA T
Sbjct: 23 AGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ QVY++G FG +G + L T PQ +++L + + Q A G+ ++ +G
Sbjct: 83 YSESFTQVYSWGWGDFGRLGHG-NSSDLFT-PQPIKALHGLRIKQIACGDSHCLAVTMDG 140
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + + + V +AAG + A+ +Y
Sbjct: 141 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVSVKMVAAGAEHTAAVTEDGE---LYG 196
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + + + V VA G H V G + T+GW +Y
Sbjct: 197 WGWGRYGNLGLGDRNDRLVPEKVSTVEGVKM--VKVACGWRHTISVSSSGGLYTYGWSKY 254
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E P ++AL + ++ G T ++ DG +Y +G + +G +
Sbjct: 255 GQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVG---V 311
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D + + +P V + ++VV IS W HT A+TE ++++G G G
Sbjct: 312 GD-----NVDHCSPVQVKFPHE--QKVVHISCG----WR-HTLAVTERQNVFSWGRGTNG 359
Query: 511 QLG 513
QLG
Sbjct: 360 QLG 362
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ QG+ + AAGA
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEH 184
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G++Y +G +G G + +LV P+ V +++ + +V+ A G T +S
Sbjct: 185 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSS 242
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L EN+ + +I+ G+ + +AL S +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENL-ISEISGGWRHTMALT---SDGKL 298
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 299 YGWGWNKFGQVGVGDNVDHCSPV---QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 355
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG ++PK+++ L+
Sbjct: 356 GTNGQLGHGESIDRNIPKMIEVLS 379
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4007 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4120
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4235
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4236 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3124
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287
Query: 510 GQLG 513
GQ G
Sbjct: 3288 GQQG 3291
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3991 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4050
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 4051 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 4108
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ V+ IA G L C
Sbjct: 4109 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQTL-CLTDDD 4166
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4167 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4285 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4331
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L++ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3952 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4011
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4012 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4069
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4070 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4125
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4126 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4185
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4186 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4240
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4241 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4289
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2955 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3014
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3015 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3073
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+
Sbjct: 3074 VFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTW 3129
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3130 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3187
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3188 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3247
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3248 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3292
Query: 510 GQLG 513
GQ G
Sbjct: 3293 GQQG 3296
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3987 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4046
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4047 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4104
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4105 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4163
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4164 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4220
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4221 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4280
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4281 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4330
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4331 AGKLPA 4336
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 445 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 493
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 494 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 549
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 550 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 609
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 610 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 661
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 662 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 696
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 493
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
+ L +NI + A L+ G VY++ G+ RLGH EP + G
Sbjct: 494 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 553
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 554 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 610
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 611 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 670
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 671 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 720
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 721 AAGST-----HCLALTEDSEVHSWGSNDQCQ 746
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2999 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3058
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3059 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3115
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3116 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3174
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3175 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3230
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3231 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3290
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3291 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3331
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 565 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 624
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 625 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 682
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 683 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 730
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 571
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 572 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 629
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 630 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 685
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 686 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 740
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 741 ------SNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 783
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 618 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 735
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L++ +V IA G
Sbjct: 736 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 775
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3208 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3262
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3263 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3320
Query: 257 AIGN 260
A G+
Sbjct: 3321 ACGS 3324
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3857 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3916
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3917 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3974
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3975 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4030
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4031 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4090
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4091 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4145
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4146 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4194
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3892 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3951
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3952 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4009
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4010 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4068
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4069 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4125
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4126 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4185
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4186 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4235
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4236 AGKLPA 4241
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 350 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 398
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 399 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 454
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 455 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 514
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 515 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 566
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 567 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 601
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2860 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2919
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 2920 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2978
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + L S +Y+
Sbjct: 2979 VFSWGEGDDGKLGHFSRMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTW 3034
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3035 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3092
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3093 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3152
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3153 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3197
Query: 510 GQLG 513
GQ G
Sbjct: 3198 GQQG 3201
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 398
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 399 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 458
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 459 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 515
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 516 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 575
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 576 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 625
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H LTE +++++G+ D+ Q
Sbjct: 626 AAGST-----HCLVLTEDSEVHSWGSNDQCQ 651
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2904 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2963
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+++LK + A G+
Sbjct: 2964 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIQALKTKRIRDIAYGSS 3020
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3021 HSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3079
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3080 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3135
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3136 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3195
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3196 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3236
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 530 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 587
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + L L
Sbjct: 588 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLVL 635
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 534
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 535 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 590
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H V+ +D V +WG
Sbjct: 591 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLVLTEDSEVHSWG 645
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ VL+ +
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L++ +V IA G
Sbjct: 641 VH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 680
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3113 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3167
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3168 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3225
Query: 257 AIGN 260
A G+
Sbjct: 3226 ACGS 3229
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4007 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4120
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4235
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4236 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQ 4158
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4159 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4215
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4276 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4325
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4326 AGKLPA 4331
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 26/364 (7%)
Query: 154 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS 213
PG T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 271
G+VY+ G+ + G G+ + V P+ + +L + V + A+ G L+ +G+
Sbjct: 3010 VEGKVYSCGEATNGRLGLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+++ G+D +LGH + N +P L+ L+ + IA G + L S +Y+
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTW 3124
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGR 389
G G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D
Sbjct: 3243 --------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDH 3287
Query: 510 GQLG 513
GQ G
Sbjct: 3288 GQQG 3291
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
+ L +NI + A L+ G VY++ G+ RLGH EP + G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H LTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLVLTEDSEVHSWGSNDQCQ 741
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+++LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIQALKTKRIRDIAYGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + L L
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLVL 725
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ V+++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H V+ +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLVLTEDSEVHSWG 735
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +I+ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ VL+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L++ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 770
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 3947
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3948 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4005
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L + VV IAAG + AC + +++ G G
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKG 4061
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGHG D+ P+L++ Q + V +G + D V +WG G YG LG
Sbjct: 4062 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4121
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4122 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4176
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4177 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4225
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A + + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2912 GLESAASIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2971
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G++YA G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V
Sbjct: 2972 EGKIYACGEATNGRLGLGL-SSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3030
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 3031 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 3086
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P+L++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3144
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3145 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3203
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3204 -------DVHVRKPQIVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3249
Query: 511 QLG 513
Q G
Sbjct: 3250 QQG 3252
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3923 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3982
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 3983 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4040
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 4041 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4099
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L M V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4100 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4156
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4157 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4216
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ T T
Sbjct: 4217 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 4266
Query: 498 SGKLYA 503
+GK+ A
Sbjct: 4267 AGKMPA 4272
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 34/290 (11%)
Query: 231 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G+ G KL V P ++L + V Q +LSR G VYT ++
Sbjct: 379 WGLLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNY---------- 428
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ + P L+ L + +V++AA LA SG VYS GCG GG+LGHG T
Sbjct: 429 KSTTLAPM-LIHGLSSRKIVKLAAHPDGQHFLALSTSG-EVYSWGCGDGGRLGHGDATYL 486
Query: 348 KHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P LI F + Q V +A G+ ++A V DG + TWG G YG LGHG+ E + P
Sbjct: 487 EEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPM 546
Query: 406 VVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
+V AL K + VA +GD T V+E+G V+S+G G+ LG +DG T
Sbjct: 547 LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKT 598
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+LV L+ ++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 599 PKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 641
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 39/342 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 246
P ++L + Q +++S +G VY Q K T +P L+
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVY-------------TQNYKSTTLAPMLIH 439
Query: 247 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
L + +V+ A G F A LS G VY++ G+ RLGH EP + G
Sbjct: 440 GLSSRKIVKLAAHPDGQHFLA-LSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGK 498
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VVQIA G Y A+ +Y+ G G G+LGHGS D P L+ +
Sbjct: 499 QTGKQVVQIACGSTYSAAVTADGE---LYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQK 555
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 556 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 615
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ SL+ ++VV I
Sbjct: 616 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRYPKLLDSLQ--GKKVVDI 665
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
++ ++ H ALT+ G+++++G+ DK Q L N+ +
Sbjct: 666 AVGST-----HCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQ 702
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 163/349 (46%), Gaps = 22/349 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G +Y+ G ++G+LG G + + PR I +L ++ +
Sbjct: 2955 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAV 3014
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3015 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3072
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 3073 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3131
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3132 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3187
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G +
Sbjct: 3188 VWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3247
Query: 442 SASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
QGN V P LV L+ V ++S+ W
Sbjct: 3248 HGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3287
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 109/173 (63%), Gaps = 5/173 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G +S AVT+ G +Y++G + G+LGHG++E+ P + +L+G +++ A G+G
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+T+ +++ GQV+++G +G + G G+ +P+LVE L+++ +V+ G+ F+ L
Sbjct: 566 AQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVAL 623
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+++G+VYT+ G++ RLGH T+ + P LL +L+ VV IA G + LAL
Sbjct: 624 TKDGQVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGKKVVDIAVGSTHCLAL 675
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 123/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ----GIRIIQAAAGAGRTML 211
H +A+++ G VYS+G G+LGHG P I + G +++Q A G+ +
Sbjct: 457 HFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAA 516
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
++ G++Y +G+ ++G +G ++ VT+P LV +LK VV A G+ T ++
Sbjct: 517 VTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTEN 574
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 575 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 630
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+ G G +LGHG+ ++P+L++ Q + V +A G+ H + +G V +WG
Sbjct: 631 TWGKGDNQRLGHGTDEHVRYPKLLDSLQ--GKKVVDIAVGSTHCLALTDEGEVHSWG 685
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ + LQ + I++ G+ ++
Sbjct: 563 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + V P+L++SL+ VV A+G+ L+ EG
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTD--EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGE 680
Query: 272 VYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAG 312
V+ SWG++ +L H PN +P L G L + +V I+ G
Sbjct: 681 VH--SWGSNDKLQHFDTLFPNKKQPKALPG-LNSKHIVGISCG 720
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3164 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG 3218
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3219 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3276
Query: 257 AIGN 260
A G+
Sbjct: 3277 ACGS 3280
>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 371
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 167/358 (46%), Gaps = 26/358 (7%)
Query: 41 GESTPGEFPLAASPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYQLSISELA 99
GE P FP+ P ++ VLT+ L DLA+LEATC R ++E A
Sbjct: 3 GEKAPRAFPIEELPGHLIGEVLTSGGLAAADLARLEATCRALR-----------PLAEYA 51
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLL-----AGEACCRRENSQAIAGP 154
A +C RA F M A R L ++CGGSWK VLRFL +G + Q G
Sbjct: 52 ASKLCAARAAFAAMGPAARGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGSMQVATGR 111
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTMLIS 213
H++ V VYS GS+ G LGHG + S + +I +A +
Sbjct: 112 YHTLLVHDSS-VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVL 170
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
++G+V+ G +S +G G + + P VE+LK I Q A G FT +L+R+G+VY
Sbjct: 171 ESGEVFTCGDNSSLCCGHGEVG-RTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVY 229
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
T +LGH + P + + PVVQIAAG Y A+ V+S G
Sbjct: 230 TCGSNTHGQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVT---DDGTVHSFGS 286
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RY 390
LGHG + DE PR I+ F+ N+ V V+AG HA + G V W G RY
Sbjct: 287 CTNFCLGHGDQHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYV--WCSGERY 342
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 299 GTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
GT+E +Q+A G + L + +VYS G L G LGHG D +
Sbjct: 96 GTVETTSGSMQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVS 149
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 414
+L V+ ++A HAA V + G V T G C GHG E ++ P V+AL +
Sbjct: 150 FPSLSCVINISASHNHAAFVLESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIP 208
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VATG T +++ DG VY+ G LGH D TP+L+ L + +
Sbjct: 209 CKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRA--------TPKLI-ELFEGS 259
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VVQI+ S +TFA+T+ G +++FG+ LG
Sbjct: 260 TPVVQIAAGAS-----YTFAVTDDGTVHSFGSCTNFCLG 293
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYT 424
VA G ++ +DG+V T G +G LGHG+ + PK+++ + +A G
Sbjct: 212 VATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASY 271
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
TF V++DG V+SFG + LGH G++H +L P+ + S K N VV++S +
Sbjct: 272 TFAVTDDGTVHSFGSCTNFCLGH-------GDQHDELL-PRAIQSFKWRNIHVVRVSAGD 323
Query: 485 SIYWNAHTFALTESGKLYAFG 505
H AL G ++ G
Sbjct: 324 E-----HAVALDALGYVWCSG 339
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3951 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4010
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4011 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4068
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I +V +AAG + AC + +Y+ G G
Sbjct: 4069 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIELVDVAAGGAHS---ACVTAAGDLYTWGKG 4124
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4125 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4184
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4185 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4239
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4240 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4288
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E+VP +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 172/355 (48%), Gaps = 18/355 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3995 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4054
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I +V A G +A +
Sbjct: 4055 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIELVDVAAGGAHSACV 4112
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4113 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4170
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4171 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4228
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 4229 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4288
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
DG N + P+LV +L+ V +++ W+ A +GKL
Sbjct: 4289 -----DGTTN---AIQRPRLVPALQGKKVNRVACGSAHTLAWSTSKPA--SAGKL 4333
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 166/325 (51%), Gaps = 26/325 (8%)
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
+L + ++Q A G+ ++ G+VYA G+ + G G+ + V P+ V +L +
Sbjct: 2992 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQVTALSSYV 3050
Query: 253 VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
V + A+ G L+ +G+V+++ G+D +LGH + N +P L+ L+ + IA
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 3109
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G + AL S +Y+ G G G+LGHG T + P++++ LL + + VA G+
Sbjct: 3110 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGS 3164
Query: 371 WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + +G V +WG G +G LG G E ++P+ ++ LN + G + +
Sbjct: 3165 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
++ G V+++G G+ LGH + +V PQ+V L+ +++V +++
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVGA---- 3270
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
H A+T++G++YA+G D GQ G
Sbjct: 3271 -LHCLAVTDAGQVYAWGDNDHGQQG 3294
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 165/355 (46%), Gaps = 24/355 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAV 3056
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3114 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3172
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3173 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3228
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3229 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3288
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+ QGN V P LV L+ V ++S+ W A
Sbjct: 3289 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMA 3334
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 133/281 (47%), Gaps = 20/281 (7%)
Query: 235 GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 294
G + P E+L + VVQ A G+ ++ EG+VY + RLG V
Sbjct: 2980 GLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI 3039
Query: 295 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+ L + V ++A A A G V+S G G GKLGH SR + PRLIE
Sbjct: 3040 PRQVTALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+ ++ +A G+ H+A + G + TWG G YG LGHG+ + PK+V+ L +
Sbjct: 3099 ALKTKRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3156
Query: 415 AIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
I VA G D T ++++G V+S+G G+ LG G+ N+ PQ + L
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNIERLN- 3207
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ V QI + ALT+SG ++ +G GD +LG
Sbjct: 3208 -GQGVCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 3242
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + V P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAV--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3260
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 257 AIGN 260
A G+
Sbjct: 3319 ACGS 3322
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ G W VGQ G V T G C G G + + VP + L+ + + VA G +
Sbjct: 2954 IQRGPWTPFGVGQ-GAVST---GSLCCDGVGLSQIK-VPSFSETLSALNVVQVAGGSKSL 3008
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
F V+ +G VY+ G + L G G V P+ VT+L + V +
Sbjct: 3009 FAVTVEGKVYACGEATNGRL-------GLGISSGTVPIPRQVTALSSYVVKKVAVHSGGR 3061
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
H ALT GK++++G GD G+LG
Sbjct: 3062 -----HATALTVDGKVFSWGEGDDGKLG 3084
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 177/364 (48%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G+ II GA T
Sbjct: 25 AGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTS 84
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ +VY++G FG +G + L T PQ +++L ++ + Q A G+ ++ +G
Sbjct: 85 YSESRMEVYSWGWGDFGRLGHG-NSSDLFT-PQPIKALHSLKIRQIACGDSHCLAVTMDG 142
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + + + + +AAG + A+ +Y
Sbjct: 143 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVSIKMVAAGAEHTAAVTEDGE---LYG 198
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 389
G G G LG G R D P E+ L+N +++ A W H V G + T+GW +
Sbjct: 199 WGWGRYGNLGLGDRNDRLVP---EKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSK 255
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LGHG+ E P V+AL D ++ G T ++ DG++Y +G + +G
Sbjct: 256 YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVG--- 312
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+ D + + +P V + +VQIS W HT A+TE ++++G G
Sbjct: 313 VGD-----NIDHCSPVQVKFPHEQAHSLVQISCG----WR-HTLAITERQNVFSWGRGTN 362
Query: 510 GQLG 513
GQLG
Sbjct: 363 GQLG 366
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 159/327 (48%), Gaps = 31/327 (9%)
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
PIR ++I +AGA ++ + V ++G+ G+ +G + +P + +L
Sbjct: 16 PIR-----QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR--PTPTQLSTLD 68
Query: 250 NIFVVQAAIGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
+ ++ G T S E R VY++ WG+ RLGH + P P+ L ++ +
Sbjct: 69 GLDIISITCGADHTTSYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHSLKIR 126
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
QIA G + LA+ V S G G+LG G+ D P+ I+ FQ ++++ +VA
Sbjct: 127 QIACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIK--MVA 181
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
AGA H A V +DG + WGWGRYG LG G+ VP+ V +N K I VA G T
Sbjct: 182 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTIS 241
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
VS G +Y++G + LGH D LTP V +L R IS+ + +
Sbjct: 242 VSSSGGLYTYGWSKYGQLGHGDFED--------HLTPHKVEAL-----RDSYISMISGGW 288
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGI 514
HT ALT G LY +G GQ+G+
Sbjct: 289 --RHTMALTSDGNLYGWGWNKFGQVGV 313
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ QG+ I AAGA
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEH 186
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G++Y +G +G G + +LV P+ V + ++ A G T +S
Sbjct: 187 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSLVNGDKMIMVACGWRHTISVSS 244
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH + L + + I+ G+ + +AL + +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVE-ALRDSYISMISGGWRHTMALTSDGN---L 300
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y G G++G G D P ++ V ++ G H + + V +WG G
Sbjct: 301 YGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRG 360
Query: 389 RYGCLGHGNEECESVPKVVQALN 411
G LGHG ++PK+++ L+
Sbjct: 361 TNGQLGHGESMDRNLPKIIEVLS 383
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 164/350 (46%), Gaps = 15/350 (4%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
S+ VYS+G G+LGHG + + + P+PI++L ++I Q A G + ++ G+V ++
Sbjct: 88 SRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSW 147
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
G++ G+ G LV PQ +++ + + + A G TA ++ +G +Y + WG
Sbjct: 148 GRNQNGQLGLGTTEDSLV--PQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYG 205
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
LG + + P + + ++ +A G+ + ++++ S +Y+ G G+LGH
Sbjct: 206 NLGLGDRNDRLVPEK-VSLVNGDKMIMVACGWRHTISVS---SSGGLYTYGWSKYGQLGH 261
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN--E 398
G D P +E L + + +G W H + DG + WGW ++G +G G+ +
Sbjct: 262 GDFEDHLTPHKVEA---LRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNID 318
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
C V + ++ G T ++E +V+S+G G + LGH D +
Sbjct: 319 HCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKI 378
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT--ESGKLYAFGA 506
VL+ + Q+ V SL S + +A+ ESG+ + G
Sbjct: 379 IEVLSAD-GSGGHQIEASTVDPSLGKSWVSPSDRYAIVPDESGQAVSVGG 427
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 175/364 (48%), Gaps = 26/364 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S VV S+G GQLGHG T++ P + +L I A GA T+
Sbjct: 21 AGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLA 80
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ ++Y++G FG +G L+ PQ + +L+ + + Q A G+ ++ EG
Sbjct: 81 YSESRNELYSWGWGDFGRLGHGNSSDLLI--PQPIIALQGLRIKQIACGDSHCLAVTMEG 138
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + + +P+ +AAG + +A+ +Y
Sbjct: 139 EVQSWGRNQNGQLGLGNTEDSLVPQKIQ-AFKGVPIKMVAAGAEHSVAIT---ENGELYG 194
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D +P + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRWNPEKVSSVDCDKM--VMVACGWRHTISVSSSGGIYTYGWSKY 252
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHGN E VP+ +QAL+D V+ G + ++ G ++ +G + G +
Sbjct: 253 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNK---FGQVGV 309
Query: 451 ADGQGN-RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
D + V PQ ++RVVQIS W HT A+TE ++++G G
Sbjct: 310 GDNLDHCSPVQVKFPQ--------DQRVVQISCG----WR-HTIAVTEKENVFSWGRGTN 356
Query: 510 GQLG 513
GQLG
Sbjct: 357 GQLG 360
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 153/302 (50%), Gaps = 11/302 (3%)
Query: 153 GPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++A + S+ +YS+G G+LGHG + + P+PI +LQG+RI Q A G +
Sbjct: 74 GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLA 133
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G+V ++G++ G+ G LV PQ +++ K + + A G + ++ G
Sbjct: 134 VTMEGEVQSWGRNQNGQLGLGNTEDSLV--PQKIQAFKGVPIKMVAAGAEHSVAITENGE 191
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+Y + WG LG + P + +++ +V +A G+ + ++++ S +Y+
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRWNPEK-VSSVDCDKMVMVACGWRHTISVS---SSGGIYTY 247
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRY 390
G G+LGHG+ D P ++ Q L+ + + +G W H+ + G + WGW ++
Sbjct: 248 GWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKF 304
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G +G G+ P V+ D + + ++ G T V+E +V+S+G G + LGH
Sbjct: 305 GQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT 364
Query: 451 AD 452
D
Sbjct: 365 ID 366
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 157/318 (49%), Gaps = 24/318 (7%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R++ +AGA T+ + V ++G+ G+ +G + + P + +L + A
Sbjct: 15 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSIA 72
Query: 258 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S +Y++ WG+ RLGH + + P P++ L+ + + QIA G +
Sbjct: 73 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 131
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G+ D P+ I+ F+ + ++ +VAAGA H+ +
Sbjct: 132 LAVTMEGE---VQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIK--MVAAGAEHSVAI 186
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++G + WGWGRYG LG G+ P+ V +++ K + VA G T VS G +Y+
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH D L PQ + +L ++ + Q+S W H+ ALT
Sbjct: 247 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 291
Query: 497 ESGKLYAFGAGDKGQLGI 514
+G L+ +G GQ+G+
Sbjct: 292 STGLLFGWGWNKFGQVGV 309
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +G+ I AAGA
Sbjct: 123 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEH 182
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I++ G++Y +G +G G + + +P+ V S+ +V A G T +S
Sbjct: 183 SVAITENGELYGWGWGRYGNLGLGDRNDRW--NPEKVSSVDCDKMVMVACGWRHTISVSS 240
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + P L L + + Q++ G+ + +AL +G+ +
Sbjct: 241 SGGIYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALTS--TGL-L 296
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
+ G G++G G D P Q + Q VV + W H V + V +WG
Sbjct: 297 FGWGWNKFGQVGVGDNLDHCSPV---QVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGR 353
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG+ + PK+++AL+
Sbjct: 354 GTNGQLGHGDTIDRNSPKIIEALS 377
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 26/226 (11%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV- 364
V+ I+AG + +AL SG V S G G G+LGHG D P Q L+ Q +
Sbjct: 16 VLLISAGASHTVALL---SGNVVCSWGRGEDGQLGHGDTDDRPLP---TQLSALDAQHID 69
Query: 365 VVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+A GA H + + +WGWG +G LGHGN +P+ + AL ++ +A GD
Sbjct: 70 SIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDS 129
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
V+ +G+V S+G ++ LG D L PQ + + K V ++V
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDS--------LVPQKIQAFKGVPIKMVAAGAE 181
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+ A+TE+G+LY +G G G LG+ ++ +R NPE+V
Sbjct: 182 -------HSVAITENGELYGWGWGRYGNLGL---GDRNDRWNPEKV 217
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G HS+A+TS G+++ +G N GQ+G G + P ++ Q R++Q + G
Sbjct: 278 SQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWR 337
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
T+ +++ V+++G+ + G+ +G T SP+++E+L
Sbjct: 338 HTIAVTEKENVFSWGRGTNGQLGHG--DTIDRNSPKIIEAL 376
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E IP+ +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIPIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358
Query: 511 QLGI 514
QLGI
Sbjct: 359 QLGI 362
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73
Query: 258 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIK--MVAAGAEHTAAV 187
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 248 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 292
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GI I AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEH 183
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 22/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
GV++ +G N GQLG + +L +R +Q G ++ G+VYA G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V++P L+E+L+++ V Q A+ G L+ G V+++ G+D
Sbjct: 3679 GA--GGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDG 3736
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH ++ P L+ +L + VV +A G + AC + +Y+ G G G+LGH
Sbjct: 3737 KLGHGSKALCERPK-LIESLRDKHVVSVACGGAHS---ACITASGELYTWGKGRYGRLGH 3792
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+ +E+ N+ V +G V +DG V +WG G YG LG G +
Sbjct: 3793 GDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGC 3852
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P+ + +L + I V G + ++ G VY++G G+ LGH + +V
Sbjct: 3853 KFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGS--------EDHV 3904
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
PQ V Q +RV+Q+++ + H A T+SG+++ +G D+GQLG
Sbjct: 3905 RRPQAVQGALQ-GKRVIQVAVG-----SLHCVACTDSGEVFTWGDNDEGQLG 3950
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 167/349 (47%), Gaps = 17/349 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G A+TS G VY+ G + G+LG G TE P I +LQ + + Q A +G
Sbjct: 3656 QIVGGEQTLFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGG 3715
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ +G V+++G+ G+ +G + L P+L+ESL++ VV A G +A +
Sbjct: 3716 KHCLALTSSGDVFSWGEGDDGKLGHGSKA--LCERPKLIESLRDKHVVSVACGGAHSACI 3773
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P + L V+ +A G L G+
Sbjct: 3774 TASGELYTWGKGRYGRLGHGDSEDQLKPKK-VEELAGHNVLDVACGSGDAQTLCVSRDGL 3832
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P+ I+ Q N + V G+ + + G V TWG
Sbjct: 3833 -VWSWGDGDYGKLGRGGSDGCKFPQKIDSLQ--NAGVIKVECGSQFSVALTAAGVVYTWG 3889
Query: 387 WGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G Y LGHG+E+ P+ VQ AL + I VA G ++ G+V+++G + L
Sbjct: 3890 KGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQL 3949
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
G DG N + P+LV SLK V +++ W+ A
Sbjct: 3950 G-----DGSTN---AIQRPKLVASLKGKKMNRVACGSAHTVSWSTSKSA 3990
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 32/385 (8%)
Query: 134 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 193
RFL A E C+ + P + K V+ +G N QLG + P+
Sbjct: 2625 RFL-AQETECKLGIVNQMGSPSMRENIECK--VFVWGLNDKDQLGGLKGSKIKEPKFSEV 2681
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
+ ++ + A G+ ++S G+V+A G+ + G G+ + V P+ + L F+
Sbjct: 2682 ISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGR--LGLGHSHNVAQPKPLTDLSPYFI 2739
Query: 254 VQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
+ A+ G L+ +GRV+++ G D +LGH + + P L+ +L+ + +A
Sbjct: 2740 KKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPK-LVESLKCKRIRDVAC 2798
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGA 370
G + A+ S +Y+ G G G+LGHG + P+ Q + L+ + VV VA G+
Sbjct: 2799 GSSHSAAVT---SSGELYTWGSGEYGRLGHGDNVPQLKPK---QVRALSHERVVQVACGS 2852
Query: 371 WHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + R V +WG G +G LG G + S+P+ V+ LN + I V G + +
Sbjct: 2853 RDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL 2912
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S++G V+++G G+ LGH + ++V PQ+V L N V+Q+S+
Sbjct: 2913 SKNGKVWTWGKGDYFRLGHGS--------DSHVRWPQVVEELADKN--VIQVSVGA---- 2958
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
H A+T+ G++YA+G D GQ G
Sbjct: 2959 -LHCIAVTDRGEVYAWGDNDHGQQG 2982
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 168/344 (48%), Gaps = 21/344 (6%)
Query: 151 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG S+ + S G V++ G ++G+LG G + +P+P+ L I+ + +G
Sbjct: 2690 IAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGR 2749
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + + P+LVESLK + A G+ +A ++
Sbjct: 2750 HALALTIDGRVFSWGEGEDGKLGHGNKIS--YDRPKLVESLKCKRIRDVACGSSHSAAVT 2807
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P + L + VVQ+A G LA
Sbjct: 2808 SSGELYTWGSGEYGRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHW- 2865
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
VYS G G GKLG G P+ +E LN Q V+ V GA + + ++G+V TWG
Sbjct: 2866 VYSWGDGDFGKLGKGGSDGSSLPQNVET---LNSQQVIQVECGAQFSLALSKNGKVWTWG 2922
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG++ P+VV+ L D I V+ G V++ G+VY++G +
Sbjct: 2923 KGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQ-- 2980
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G GN N P +V L+ + V ++S+ W++
Sbjct: 2981 -----QGNGNTTVN-RKPAIVRGLEAITN--VACGSSHSVAWSS 3016
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 22/288 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG RP+ + SL+ RI A G+ +
Sbjct: 2746 SGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAA 2805
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ +G++Y +G +G +G +L P+ V +L + VVQ A G+ L+ R
Sbjct: 2806 VTSSGELYTWGSGEYGRLGHGDNVPQL--KPKQVRALSHERVVQVACGSRDAQTLALTER 2863
Query: 272 VYTFSWGND--ARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ +SWG+ +LG + P +VE TL + V+Q+ G + LAL+
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVE------TLNSQQVIQVECGAQFSLALS---K 2914
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V++ G G +LGHGS + + P+++E+ N+ + V+ GA H V G V
Sbjct: 2915 NGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNV--IQVSVGALHCIAVTDRGEVYA 2972
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
WG +G G+GN P +V+ L + +VA G + S G
Sbjct: 2973 WGDNDHGQQGNGNTTVNRKPAIVRGLEAI--TNVACGSSHSVAWSSTG 3018
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 125/311 (40%), Gaps = 80/311 (25%)
Query: 266 LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
++R +T SWG + GH+ E V+ + L + VQI G
Sbjct: 3604 VNRSPDEWTLSWGGSGVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQT 3663
Query: 316 LLALACQPSGMA------------------------------VYSVGCGLGGK------- 338
L AL A V V GGK
Sbjct: 3664 LFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTS 3723
Query: 339 --------------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
LGHGS+ + P+LIE + + V VA G H+A + G + T
Sbjct: 3724 SGDVFSWGEGDDGKLGHGSKALCERPKLIESLR--DKHVVSVACGGAHSACITASGELYT 3781
Query: 385 WGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG GRYG LGHG+ E + PK V+ L ++V + +GD T VS DG V+S+G G+
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDY 3841
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LG +DG PQ + SL+ N V+++ + + ALT +G +Y
Sbjct: 3842 GKLGRGG-SDG-------CKFPQKIDSLQ--NAGVIKVECGSQF-----SVALTAAGVVY 3886
Query: 503 AFGAGDKGQLG 513
+G GD +LG
Sbjct: 3887 TWGKGDYHRLG 3897
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A++ G V+++G +LGHG+ P+ + L +IQ + GA
Sbjct: 2901 QVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALH 2960
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
+ ++D G+VYA+G + G+ G T + P +V L+ I
Sbjct: 2961 CIAVTDRGEVYAWGDNDHGQQGNG--NTTVNRKPAIVRGLEAI 3001
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 2253 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 2312
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 2313 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2370
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH + P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 2371 WGEAEDGKLGHGSRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 2426
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 2427 RYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2486
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2487 RGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGS----- 2541
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++ + I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 2542 ---DDHVRRPRQVQGLQ--GKKAIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 2590
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 174/357 (48%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 2297 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 2356
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 2357 KHCLALSSEGEVYSWGEAEDGKLGHGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 2414
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 2415 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVGIACGSGDAQTL-CLTDDD 2472
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 2473 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVRVECGSQFSVALTKAGAVYTWG 2530
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L KAI +ATG +EDG+VY++G + LG
Sbjct: 2531 KGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 2590
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 2591 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 2637
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 166/325 (51%), Gaps = 26/325 (8%)
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
+L + ++Q A G+ ++ G+VYA G+ + G G+ + V P+ V +L +
Sbjct: 1293 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLS-SGTVPLPRQVTALSSYV 1351
Query: 253 VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
V + A+ G L+ +G+V+++ G+D +LGH + N +P L+ L+ + IA
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 1410
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G + AL S +Y+ G G G+LGHG T + P++++ LL + V VA G+
Sbjct: 1411 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDTTTQLKPKMVKV--LLGHRVVQVACGS 1465
Query: 371 WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + +G V +WG G +G LG G E ++P+ ++ LN + G + +
Sbjct: 1466 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 1525
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
++ G V+++G G+ LGH + +V PQ+V L+ +++V +++
Sbjct: 1526 TKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVGA---- 1571
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
H A+T+SG++YA+G D GQ G
Sbjct: 1572 -LHCLAVTDSGQVYAWGDNDHGQQG 1595
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 1298 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAV 1357
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 1358 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 1414
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L VVQ+A G LA
Sbjct: 1415 HSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPK-MVKVLLGHRVVQVACGSRDAQTLAL 1473
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 1474 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 1529
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 1530 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 1589
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 1590 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1630
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+ P E+L + VVQ A G+ ++ EG+VY + RLG V +
Sbjct: 1285 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQV 1344
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
L + V ++A A A G V+S G G GKLGH SR + PRLIE +
Sbjct: 1345 TALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 1403
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
++ +A G+ H+A + G + TWG G YG LGHG+ + PK+V+ L + + V
Sbjct: 1404 KRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQV 1461
Query: 419 ATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
A G D T ++++G V+S+G G+ LG G+ N+ PQ + L +
Sbjct: 1462 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNIERLN--GQG 1511
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V QI + ALT+SG ++ +G GD +LG
Sbjct: 1512 VCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 1543
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 1507 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 1561
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 1562 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 1619
Query: 257 AIGN 260
A G+
Sbjct: 1620 ACGS 1623
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 173/357 (48%), Gaps = 23/357 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 20 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 79
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G + GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 80 GAGGRLG--IGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 137
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L I VV +AAG + AC + +Y+ G G G+LGH
Sbjct: 138 KLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGH 193
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 194 SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 253
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + +L + + V G + +++ G VY++G G+ LGH + +V
Sbjct: 254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 305
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG N
Sbjct: 306 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLGDGTTN 355
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 16/343 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 57 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 116
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 117 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 174
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV IA G L C
Sbjct: 175 TAAGDLYTWGKGRYGRLGHSDSEDQLKP-KLVEALQGHRVVDIACGSGDAQTL-CLTDDD 232
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 233 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 290
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++G + LG
Sbjct: 291 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 350
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
DG N + P+LV +L+ V +++ W+
Sbjct: 351 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWS 385
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 19/247 (7%)
Query: 269 EGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 17 QGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE-ALATLRPVQLIGGEQTLFAVTADGK-- 73
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V +WG
Sbjct: 74 -LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 132
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G LG
Sbjct: 133 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 192
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H+ D L P+LV +L+ RVV I+ + +A T LT+ ++++G
Sbjct: 193 HSDSED--------QLKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWSWGD 239
Query: 507 GDKGQLG 513
GD G+LG
Sbjct: 240 GDYGKLG 246
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 23/357 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G+VYA G
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3090
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G + LV P L+ES++++F+ + A+ G LS + VY++ G+D
Sbjct: 3091 GAGGRLGIGGTDSVLV--PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDG 3148
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH E L+ L+ ++ IA G + A+ S +Y+ G G G+LGH
Sbjct: 3149 KLGHGNRLA-CETPKLIEALQGYEIIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGH 3204
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+LIE+ + V +G + D V +WG G YG LG G +
Sbjct: 3205 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 3264
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VPK +++L + I V G + ++ G VY++G G+ LGH G G +V
Sbjct: 3265 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-----GTGE---HV 3316
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG + N
Sbjct: 3317 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDEGEVFTWGDNDEGQLGDDTTN 3366
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 168/341 (49%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG S+ + S +G +Y+ G ++G+LG G + PRPI L I+ + +G
Sbjct: 2093 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2152
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
M ++ G+V+++G+ G+ +G + + P+++E+L++ + A G+ +A ++
Sbjct: 2153 HAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAIT 2210
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ +L +VQ+A G LA G
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDAQTLALTDEGW- 2268
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ L + V + GA + + + G V TWG
Sbjct: 2269 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLALTKTGEVWTWGK 2326
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG+++ P V+++L D K IHVA G V++ G VY++G + G+
Sbjct: 2327 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2386
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
NR P LV L+ V+ V ++SI W
Sbjct: 2387 GTTI---VNRK-----PALVHGLEDVHINRVACGSSHSIAW 2419
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 182/381 (47%), Gaps = 37/381 (9%)
Query: 147 NSQAIAGPGHSIAVTSKGV----------VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
N + I GP S V V+ +G N QLG + P L
Sbjct: 2028 NQEQIPGPSTSANVAQDSTGEPSSTVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQ 2087
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+ I A G+ ++S G++YA G+ + G G+ + V P+ + L + +
Sbjct: 2088 LWPIHIAGGSKSLFIVSHEGKLYACGEGTNGR--LGLGHSNNVPYPRPIPFLSQYVIKKV 2145
Query: 257 AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
A+ G L+ +G+V+++ G D +LGH N +P ++ L + + IA G
Sbjct: 2146 AVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPK-MIEALRSKKIRDIACGSS 2204
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+ A+ S +Y+ G G G+LGHG + P+LI+ L+ + V VA G+ A
Sbjct: 2205 HSAAIT---SSGELYTWGLGEYGRLGHGDNITQLKPKLIK--SLVGHRIVQVACGSRDAQ 2259
Query: 375 VVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ +G V +WG G +G LG G E ++P ++ LN ++ + + G + +++ G
Sbjct: 2260 TLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTG 2319
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+V+++G G+ LGH + ++H V P ++ SLK +++V+ +++ H
Sbjct: 2320 EVWTWGKGDYFRLGHGS------DQH--VRKPTVIESLK--DKKVIHVAVG-----ALHC 2364
Query: 493 FALTESGKLYAFGAGDKGQLG 513
A+T++G++YA+G D GQ G
Sbjct: 2365 LAVTDTGQVYAWGDNDHGQQG 2385
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 157/324 (48%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G AVT+ G VY+ G + G+LG G T+ P + S+Q + I + A +G
Sbjct: 3068 QLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGG 3127
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S VY++G+ G+ +G + +P+L+E+L+ ++ A G +A +
Sbjct: 3128 KHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLIEALQGYEIIDIACGGAHSAAI 3185
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G++YT+ G RLGH + ++P L+ L V+ +A G L C
Sbjct: 3186 TSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYKVIDVACGSGDAQTL-CITDDD 3243
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P+ IE L L + V G+ + + + G V TWG
Sbjct: 3244 NVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWG 3301
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG E PK V AL K I +ATG S++G+V+++G + LG
Sbjct: 3302 KGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG 3361
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T++
Sbjct: 3362 DDTTNAIQRPRLVSALQGKKITNV 3385
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 10/282 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A+++ VYS+G G+LGHG P+ I +LQG II A G +
Sbjct: 3125 SGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAA 3184
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ GQ+Y +GK +G +G +L P+L+E L V+ A G+ T ++ +
Sbjct: 3185 ITSTGQLYTWGKGRYGRLGHGDSEDQL--KPKLIEELVGYKVIDVACGSGDAQTLCITDD 3242
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V+++ G + +AL SG +VY
Sbjct: 3243 DNVWSWGDGDYGKLGRGGSDGCKVPKK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 3298
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P+ + Q + + +A G+ H +G V TWG
Sbjct: 3299 TWGKGDYHRLGHGTGEHVRRPKKVAALQ--GKKIISIATGSLHCVACSDEGEVFTWGDND 3356
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
G LG P++V AL K +VA G T S +
Sbjct: 3357 EGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTN 3398
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A+TS G +Y++G G+LGHG + +P+ I+SL G RI
Sbjct: 2189 EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRI 2248
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ ++D G V+++G FG+ G G++ P +E L + VVQ
Sbjct: 2249 VQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG--GSEGCNIPHNIERLNALEVVQIE 2306
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L++ G V+T+ G+ RLGH ++ + +P ++ +L++ V+ +A G + L
Sbjct: 2307 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCL 2365
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVV 376
A+ VY+ G G+ G+G+ + P L+ + +++ VA G+ H+ A
Sbjct: 2366 AVT---DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR--VACGSSHSIAWT 2420
Query: 377 GQDGRVCT 384
QD +V +
Sbjct: 2421 LQDTQVVS 2428
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 266 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 314
L+R +T SWG + H + +E P P L + VQ+ G
Sbjct: 3016 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3074
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L A+ VY+ G G GG+LG G P L+E Q + ++ + V +G H
Sbjct: 3075 TLFAVTADGK---VYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3131
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ D V +WG G G LGHGN PK+++AL + I +A G + ++ G +
Sbjct: 3132 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 3191
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G G LGH D L P+L+ L V +V+ ++ + +A T
Sbjct: 3192 YTWGKGRYGRLGHGDSEDQ--------LKPKLIEEL--VGYKVIDVACGSG---DAQTLC 3238
Query: 495 LTESGKLYAFGAGDKGQLG 513
+T+ ++++G GD G+LG
Sbjct: 3239 ITDDDNVWSWGDGDYGKLG 3257
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 23/357 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G+VYA G
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3929
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G G + LV P L+ES++++F+ + A+ G LS + VY++ G+D
Sbjct: 3930 GAGGRLGIGGTDSVLV--PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDG 3987
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH E L+ L+ ++ IA G + A+ S +Y+ G G G+LGH
Sbjct: 3988 KLGHGNRLA-CETPKLIEALQGYEIIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGH 4043
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+LIE+ + V +G + D V +WG G YG LG G +
Sbjct: 4044 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4103
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VPK +++L + I V G + ++ G VY++G G+ LGH G G +V
Sbjct: 4104 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-----GTGE---HV 4155
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG + N
Sbjct: 4156 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDEGEVFTWGDNDEGQLGDDTTN 4205
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 168/341 (49%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG S+ + S +G +Y+ G ++G+LG G + PRPI L I+ + +G
Sbjct: 2932 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2991
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
M ++ G+V+++G+ G+ +G + + P+++E+L++ + A G+ +A ++
Sbjct: 2992 HAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAIT 3049
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ +L +VQ+A G LA G
Sbjct: 3050 SSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDAQTLALTDEGW- 3107
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ L + V + GA + + + G V TWG
Sbjct: 3108 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLALTKTGEVWTWGK 3165
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG+++ P V+++L D K IHVA G V++ G VY++G + G+
Sbjct: 3166 GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3225
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
NR P LV L+ V+ V ++SI W
Sbjct: 3226 GTTI---VNRK-----PALVHGLEDVHINRVACGSSHSIAW 3258
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 175/352 (49%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P L + I A G+ ++S G++YA G+ +
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2955
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ + V P+ + L + + A+ G L+ +G+V+++ G D +L
Sbjct: 2956 NGR--LGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH N +P ++ L + + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3014 GHGNRLNLDKPK-MIEALRSKKIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGD 3069
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 401
+ P+LI+ L+ + V VA G+ A + +G V +WG G +G LG G E
Sbjct: 3070 NITQLKPKLIK--SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGC 3127
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
++P ++ LN ++ + + G + +++ G+V+++G G+ LGH + ++H V
Sbjct: 3128 NIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGS------DQH--V 3179
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P ++ SLK +++V+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3180 RKPTVIESLK--DKKVIHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3224
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 157/324 (48%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G AVT+ G VY+ G + G+LG G T+ P + S+Q + I + A +G
Sbjct: 3907 QLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGG 3966
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S VY++G+ G+ +G + +P+L+E+L+ ++ A G +A +
Sbjct: 3967 KHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLIEALQGYEIIDIACGGAHSAAI 4024
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G++YT+ G RLGH + ++P L+ L V+ +A G L C
Sbjct: 4025 TSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYKVIDVACGSGDAQTL-CITDDD 4082
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P+ IE L L + V G+ + + + G V TWG
Sbjct: 4083 NVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWG 4140
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG E PK V AL K I +ATG S++G+V+++G + LG
Sbjct: 4141 KGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG 4200
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
+ Q R + L + +T++
Sbjct: 4201 DDTTNAIQRPRLVSALQGKKITNV 4224
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 35/328 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ +L + I Q ++++ G+V+ S + PQ +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTG 509
Query: 248 LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
L I +++ A G + A L+++ VY++ G+ RLGH EP L+ L+
Sbjct: 510 LSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGK 567
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
++ + G Y A++ + A+Y+ G G G+LGHG+ D P +I ++ V
Sbjct: 568 DIIDVECGGTYSAAIS---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+ H + G+V +WG G YG LG G + +P++++ L +VK + V G
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +SEDG VY++G GE LGH NV P++V L+ + +VV +SL
Sbjct: 685 SVALSEDGHVYTWGKGEGWKLGHPT--------EENVRFPEMVEVLR--DRKVVGVSLGV 734
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQL 512
S H ALT+ G++Y +G + Q+
Sbjct: 735 S-----HVLALTDQGEVYGWGKNENKQI 757
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG T + P I++L+G II G + IS
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVY 273
G +Y +G+ ++G +G L +P ++ +L + +++ A G+F+ T ++ +G+VY
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCL--TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVY 643
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LG P L+ L+N+ +VQ+ G + +AL+ VY+ G
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALS---EDGHVYTWGK 699
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G KLGH + + + P ++E + + + V V+ G H + G V WG +
Sbjct: 700 GEGWKLGHPTEENVRFPEMVEVLR--DRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+E P++++AL K + V G +F ++D +
Sbjct: 758 CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G +S A+++ G +Y++G + G+LGHGT E+ P I +L II+ A G+ T+
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL 634
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
I+ G+VY++G +G+ G G+KL P+L+E L+N+ +VQ G F+ LS +
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGSDGSKL---PRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VYT+ G +LGH TE N P ++ L + VV ++ G ++LAL Q VY
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPE-MVEVLRDRKVVGVSLGVSHVLALTDQGE---VY 747
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G ++ S + PRLIE +
Sbjct: 748 GWGKNENKQICDSSELFVQQPRLIEALK 775
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 10/282 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A+++ VYS+G G+LGHG P+ I +LQG II A G +
Sbjct: 3964 SGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAA 4023
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ GQ+Y +GK +G +G +L P+L+E L V+ A G+ T ++ +
Sbjct: 4024 ITSTGQLYTWGKGRYGRLGHGDSEDQL--KPKLIEELVGYKVIDVACGSGDAQTLCITDD 4081
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + V+++ G + +AL SG +VY
Sbjct: 4082 DNVWSWGDGDYGKLGRGGSDGCKVPKK-IESLAGLGVIKVECGSQFSVALT--RSG-SVY 4137
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P+ + Q + + +A G+ H +G V TWG
Sbjct: 4138 TWGKGDYHRLGHGTGEHVRRPKKVAALQ--GKKIISIATGSLHCVACSDEGEVFTWGDND 4195
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
G LG P++V AL K +VA G T S +
Sbjct: 4196 EGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTLAWSTN 4237
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 11/248 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A+TS G +Y++G G+LGHG + +P+ I+SL G RI
Sbjct: 3028 EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRI 3087
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ ++D G V+++G FG+ G G++ P +E L + VVQ
Sbjct: 3088 VQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG--GSEGCNIPHNIERLNALEVVQIE 3145
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L++ G V+T+ G+ RLGH ++ + +P ++ +L++ V+ +A G + L
Sbjct: 3146 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP-TVIESLKDKKVIHVAVGALHCL 3204
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVV 376
A+ VY+ G G+ G+G+ + P L+ + +++ VA G+ H+ A
Sbjct: 3205 AVT---DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR--VACGSSHSIAWT 3259
Query: 377 GQDGRVCT 384
QD +V +
Sbjct: 3260 LQDTQVVS 3267
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 137/278 (49%), Gaps = 39/278 (14%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
PQ ++L + + Q + +L++ G+V+ + +D + P + G L
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC----------PQEMTG-L 510
Query: 302 ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
I +++IAA G YL AL VYS G G GG+LGHG + ++ P LI+ +
Sbjct: 511 SGINMIKIAAHPEGKHYL-ALT---KDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKG 566
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
++ + V G ++A + +G + TWG G YG LGHG E P ++ AL+D I V
Sbjct: 567 KDI--IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624
Query: 419 ATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
A G + T ++ G VYS+G G+ LG +DG P+L+ L+ V +
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGG-SDGSK-------LPRLIEKLQNV--K 674
Query: 477 VVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 513
+VQ+ Y A + AL+E G +Y +G G+ +LG
Sbjct: 675 IVQV------YCGAQFSVALSEDGHVYTWGKGEGWKLG 706
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 266 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 314
L+R +T SWG + H + +E P P L + VQ+ G
Sbjct: 3855 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3913
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L A+ VY+ G G GG+LG G P L+E Q + ++ + V +G H
Sbjct: 3914 TLFAVTADGK---VYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3970
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ D V +WG G G LGHGN PK+++AL + I +A G + ++ G +
Sbjct: 3971 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 4030
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G G LGH D L P+L+ L V +V+ ++ + +A T
Sbjct: 4031 YTWGKGRYGRLGHGDSEDQ--------LKPKLIEEL--VGYKVIDVACGSG---DAQTLC 4077
Query: 495 LTESGKLYAFGAGDKGQLG 513
+T+ ++++G GD G+LG
Sbjct: 4078 ITDDDNVWSWGDGDYGKLG 4096
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A++ G VY++G +LGH T E P + L+ +++ + G
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIG 259
+ ++D G+VY +GK+ E + ++L V P+L+E+LK VV G
Sbjct: 737 VLALTDQGEVYGWGKN---ENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
RV WG LG +P L+ + IH+A G + F+VS +G +Y+ G G
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2954
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LG G N NV P+ + L Q + V + H ALT GK
Sbjct: 2955 TNGRLGL-----GHSN---NVPYPRPIPFLSQYVIKKVAVHSGGK-----HAMALTLDGK 3001
Query: 501 LYAFGAGDKGQLG 513
++++G G+ G+LG
Sbjct: 3002 VFSWGEGEDGKLG 3014
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 173/324 (53%), Gaps = 23/324 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT G +++FG+N GQLG G+ + +P +++L+ +I AAG T+ +
Sbjct: 43 GDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAV 102
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D+ ++Y+FG+ S G +G + + P +ESL++ V A G + +A +++ G +
Sbjct: 103 TDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITKNGEL 160
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
Y + ++ +LG ND +P + L V+ +A GY + + +Y+ G
Sbjct: 161 YIWGSNSEGQLGL---KNDTISYPTMLDL-GKSVISVACGYYHTAVVTADGK---LYTFG 213
Query: 333 CGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
GGKLG G K P++++ ++ + V VA G H + G+V T+G G+
Sbjct: 214 ETEGGKLGLGDIEAHKVTKPKVVKG---ISGKVVKVACGGNHTVALTASGQVYTFGSGQN 270
Query: 391 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G++ +S +PK+V+AL+ K H+A G+ T VVS+ G++++FG G L
Sbjct: 271 GQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKL---- 326
Query: 450 IADGQGNRH-ANVLTPQLVTSLKQ 472
GQG+ +N+ P V LK+
Sbjct: 327 ---GQGDESFSNLFKPVKVQRLKE 347
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 21/310 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AVT +YSFG S G LGHG + P I SL+ + A G +
Sbjct: 94 AGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAA 153
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ G++Y +G +S E + G++ ++ P +++ K++ V A G + TAV++ +G+
Sbjct: 154 ITKNGELYIWGSNS--EGQLGLKND-TISYPTMLDLGKSVISV--ACGYYHTAVVTADGK 208
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENI--PVVQIAAGYCYLLALACQPSGMA 327
+YTF +LG D+E H + ++ I VV++A G + +AL SG
Sbjct: 209 LYTFGETEGGKLG----LGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTA--SGQ- 261
Query: 328 VYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VY+ G G G+LG GS+ D P+L+E ++ +A G H AVV G + T+G
Sbjct: 262 VYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKH--IACGESHTAVVSDKGELFTFG 319
Query: 387 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
GR+G LG G+E ++ P VQ L + +H+A G T V D + G ++ S
Sbjct: 320 DGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNES 379
Query: 445 LGHNAIADGQ 454
++ + G+
Sbjct: 380 SSNDEVDFGK 389
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 38/352 (10%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G V++FG + + G T + W IRS ++ A G T+++++ G+++ FG
Sbjct: 12 GAVFTFGKS---RFGDNRTNKFW----IRS---DKVTDIACGDEHTVVVTENGRLFTFGN 61
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ +G+ G+ K P V++LK + A G F T ++ ++Y+F G++ L
Sbjct: 62 NEWGQ--LGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGAL 119
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH E D+ + +LE+ V IA G + A+ +Y G G+LG +
Sbjct: 120 GHGDET-DLNMPTSIESLEDKDVNIIACGGYHSAAIT---KNGELYIWGSNSEGQLGLKN 175
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
T +P +++ L + VA G +H AVV DG++ T+G G LG G+ E V
Sbjct: 176 DTIS-YPTMLD----LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKV 230
Query: 404 --PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
PKVV+ ++ K + VA G T ++ G VY+FG G++ LG G++ +
Sbjct: 231 TKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLG-------LGSKIMDS 282
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+LV +L + ++ I+ S HT +++ G+L+ FG G G+LG
Sbjct: 283 NIPKLVEALSK--RKIKHIACGES-----HTAVVSDKGELFTFGDGRHGKLG 327
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 41/306 (13%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I + G V+ FGK FG+ T+ + S K V A G+ T V++ GR
Sbjct: 8 IPETGAVFTFGKSRFGDNR---------TNKFWIRSDK---VTDIACGDEHTVVVTENGR 55
Query: 272 VYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
++TF WG +LG + +P + L+ + +AAG + LA+ +
Sbjct: 56 LFTFGNNEWG---QLGIGSNKTRNKP-TTVKALKPEKITHVAAGRFHTLAVT---DSNKL 108
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
YS G G G LGHG TD P IE + ++ ++A G +H+A + ++G + WG
Sbjct: 109 YSFGQGSEGALGHGDETDLNMPTSIESLEDKDVN--IIACGGYHSAAITKNGELYIWGSN 166
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LG N+ S P ++ V I VA G Y T VV+ DG +Y+FG E LG
Sbjct: 167 SEGQLGLKNDTI-SYPTMLDLGKSV--ISVACGYYHTAVVTADGKLYTFGETEGGKLG-- 221
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ D + ++ V P++V K ++ +VV+++ + HT ALT SG++Y FG+G
Sbjct: 222 -LGDIEAHK---VTKPKVV---KGISGKVVKVACGGN-----HTVALTASGQVYTFGSGQ 269
Query: 509 KGQLGI 514
GQLG+
Sbjct: 270 NGQLGL 275
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F + + + +A G H VV ++GR+ T+G +G LG G+ + + P V+AL K
Sbjct: 29 KFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEK 88
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
HVA G + T V++ +YSFG G +LGH D + TS++ +
Sbjct: 89 ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETD-----------LNMPTSIESLE 137
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
++ V I H+ A+T++G+LY +G+ +GQLG++
Sbjct: 138 DKDVNIIACGGY----HSAAITKNGELYIWGSNSEGQLGLK 174
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 174/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 4204 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4263
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4264 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4321
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I V +AAG + AC + +Y+ G G
Sbjct: 4322 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVADVAAGGAHS---ACVTAAGDLYTWGKG 4377
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + + +G + D V +WG G YG LG
Sbjct: 4378 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4437
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4438 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4492
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4493 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4541
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 3211 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3270
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ V +L + V + A+ G L+ +G+V
Sbjct: 3271 EGKVYACGEATNGRLGLGL-SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 3329
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3330 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3385
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3386 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3443
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3444 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3502
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3503 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3548
Query: 511 QLG 513
Q G
Sbjct: 3549 QQG 3551
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L ++ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 700 VIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 748
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 749 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVIST 804
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 805 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 864
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 865 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 916
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 917 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 951
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 174/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 4239 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4298
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I V A
Sbjct: 4299 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVADVA 4356
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV IA G
Sbjct: 4357 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQ 4415
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4416 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4472
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4473 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4532
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4533 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--S 4582
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4583 AGKLPA 4588
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 249
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 709 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 754
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 306
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 755 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHV 814
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 815 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 871
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 872 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 931
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 932 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 980
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQ 511
H ALTE +++++G+ D+ Q
Sbjct: 981 ----HCLALTEDSEVHSWGSNDQCQ 1001
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 14/298 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 3254 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAV 3313
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3314 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3370
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3371 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3429
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3430 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3485
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3486 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3543
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 820 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 879
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 880 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 937
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 938 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 985
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS A+TS G +Y++G G+LGHG + +P+ ++ L G R+IQ A G+ +T+
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3427
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G V+++G FG + G G++ PQ +E L V Q G F+ L++ G
Sbjct: 3428 ALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3485
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G+ RLGH ++ + +P + G L +V +A G + LA+ SG VY+
Sbjct: 3486 VVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-VYA 3541
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G G+ G+G+ T + P L+ +
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLVHGLE 3568
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 767 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAA 826
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 827 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 884
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 885 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 940
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 941 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 995
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 996 ------SNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 1038
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 873 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 933 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 990
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 991 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 1030
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3463 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3517
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV L+ + +
Sbjct: 3518 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVHGLEGQKITRV 3575
Query: 257 AIGN 260
A G+
Sbjct: 3576 ACGS 3579
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 159/326 (48%), Gaps = 29/326 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H+I V G ++SFG N GQLGH + R P+ L+ I Q A GA
Sbjct: 38 QVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRT--RAEPVDGLEAHNITQVACGAQH 95
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ ++ G+V+A+G +S G+ V+ + ++ +P++V+SL VVQ A G + L+
Sbjct: 96 TLAQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTN 154
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQP 323
G +Y WG+++ LG P E P L+ L+ IP+ I+ G + + A P
Sbjct: 155 VGEIY--CWGSNSHGQLGLGSSGTP---ETKPCLVKLLQGIPISHISCGADF--SFAVTP 207
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
SG AVY G G+LG G TD P Q + L Q V + G H A + +DG V
Sbjct: 208 SG-AVYGWGKNSFGQLGLGDTTDRPQP---TQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 441
T+G G YG LGH E +P+ V L + G +T V G +Y+FG G
Sbjct: 264 FTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGG 323
Query: 442 SASLGHNAIADGQGNRHANVLTPQLV 467
S LG + ANV +PQLV
Sbjct: 324 SGQLGTKST--------ANVNSPQLV 341
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAG 205
+Q G H++A G V+++GSNS+GQLG EE P P ++SL +++Q A G
Sbjct: 87 TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGL-NVEESMMPTPKMVKSLATKQVVQIACG 145
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+M +++ G++Y +G +S G+ G GT T P LV+ L+ I + + G F+
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTP-ETKPCLVKLLQGIPISHISCGADFSFA 204
Query: 266 LSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 320
++ G VY WG ++ LG T+ P P L +L V I G + AL
Sbjct: 205 VTPSGAVY--GWGKNSFGQLGLGDTTD----RPQPTQLKSLRFQRVTYIRCGMDHTAALT 258
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQD 379
V++ G G+ G+LGH + +E PR + +L+ + G H A V
Sbjct: 259 ---RDGGVFTFGAGMYGQLGHCTSANEMLPRKV--LELMGTTVTQICCGRCHTLAFVPSK 313
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVV--------QALNDVKAIHVATGDYTTFVVSED 431
GR+ +G G G LG + + P++V ++ DVK + T + + + S+
Sbjct: 314 GRIYAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKDVKDLATETAEALSAIQSKR 373
Query: 432 GDVYSFGCGESASL 445
V + CG S
Sbjct: 374 VVVRNIFCGGDQSF 387
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 30/325 (9%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I+Q G T+L+ G++++FG + +G+ + T+ + V+ L+ + Q A
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTR----AEPVDGLEAHNITQVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T + G V F+WG+++ +LG + E + + ++ +L VVQIA G +
Sbjct: 92 GAQHTLAQNEWGEV--FAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHS 149
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+AL + +Y G G+LG GS T E P L++ Q + + + + GA +
Sbjct: 150 MALT---NVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHI--SCGADFSFA 204
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
V G V WG +G LG G+ P +++L + ++ G T ++ DG V+
Sbjct: 205 VTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVF 264
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
+FG G LGH AN + P+ V L + V QI HT A
Sbjct: 265 TFGAGMYGQLGHCT--------SANEMLPRKVLEL--MGTTVTQICCG-----RCHTLAF 309
Query: 496 TES-GKLYAFGAGDKGQLGIELVNN 519
S G++YAFG G GQLG + N
Sbjct: 310 VPSKGRIYAFGLGGSGQLGTKSTAN 334
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 158/307 (51%), Gaps = 11/307 (3%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQG++I Q A G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 127
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG+V ++G++ G+ G L+ PQ +++ +++ V A G TA +
Sbjct: 128 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAV 185
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++E +V +A G+ + + ++ +
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKV-SSVEGEKMVLVACGWRHTITVSDSGN-- 242
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + +G W H + +G++ W
Sbjct: 243 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI---SGGWRHTMALTSEGKLYGW 298
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G GN + S P V D K VA G T +SE +V+S+G G S L
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 358
Query: 446 GHNAIAD 452
G+ I D
Sbjct: 359 GNGEIVD 365
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 177/372 (47%), Gaps = 25/372 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + V+ S+G GQLGHG E+ P + I GA T
Sbjct: 20 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D QVY++G FG +G + V +PQ V++L+ + + Q A G+ ++ G
Sbjct: 80 YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 137
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + E++ V IAAG + A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFESVCVKMIAAGAEHTAAVTEDGD---LYG 193
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 251
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP V+AL D ++ G T ++ +G +Y +G + +G
Sbjct: 252 GQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV--- 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G + H+ +P V+ + ++++ Q++ W HT AL+E ++++G G G
Sbjct: 309 --GNNDDHS---SPGQVSFPE--DQKISQVACG----WR-HTLALSEKKNVFSWGRGTSG 356
Query: 511 QLGI-ELVNNQT 521
QLG E+V+ T
Sbjct: 357 QLGNGEIVDRNT 368
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 27/332 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + + ++G+ G+ +G +LV P ++ +
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G + TA E +VY++ WG+ RLGH + P P+ L+ + + QIA G + L
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A+ V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG + WGWGRYG LG G+ +P+ V ++ K + VA G T VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH D L P V +LK + + QIS W HT ALT
Sbjct: 247 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSTISQISGG----WR-HTMALTS 291
Query: 498 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N + +P +V
Sbjct: 292 EGKLYGWGWNKFGQVG---VGNNDDHSSPGQV 320
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ + + + AAGA
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEH 181
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +L+ P+ V S++ +V A G T +S
Sbjct: 182 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSD 239
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH + L++ + QI+ G+ + +AL + +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQISGGWRHTMALTSEGK---L 295
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D P Q Q + A W H + + V +WG
Sbjct: 296 YGWGWNKFGQVGVGNNDDHSSPG---QVSFPEDQKISQVACGWRHTLALSEKKNVFSWGR 352
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG+G + P ++ AL+
Sbjct: 353 GTSGQLGNGEIVDRNTPVLIDALS 376
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4007
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4008 KLYATGYGA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L VV +AAG + AC + +Y+ G G
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4121
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4236
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H +E G++Y +G D+GQLG
Sbjct: 4237 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4285
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288
Query: 511 QLG 513
Q G
Sbjct: 3289 QQG 3291
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 171/355 (48%), Gaps = 18/355 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3992 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A G +A +
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4109
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4110 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4167
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4168 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++G + LG
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4285
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
DG N + P+LV +L+ V +++ W+ A +GKL
Sbjct: 4286 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKL 4330
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
+ L +NI + A L+ G VY++ G+ RLGH EP + G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4005
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4006 KLYATGYGA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4063
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L VV +AAG + AC + +Y+ G G
Sbjct: 4064 WGEAEDGKLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4119
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4120 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4179
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4180 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4234
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H +E G++Y +G D+GQLG
Sbjct: 4235 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4283
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2949 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3008
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3009 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3067
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3068 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3123
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3124 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3181
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3182 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3240
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3241 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3286
Query: 511 QLG 513
Q G
Sbjct: 3287 QQG 3289
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 171/355 (48%), Gaps = 18/355 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3990 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4049
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A G +A +
Sbjct: 4050 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4107
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4108 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4165
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4166 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4223
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++G + LG
Sbjct: 4224 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4283
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
DG N + P+LV +L+ V +++ W+ A +GKL
Sbjct: 4284 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKL 4328
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2992 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3051
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3052 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3108
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3109 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3167
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3168 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3223
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3224 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3283
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3284 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3324
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3201 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3255
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3256 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3313
Query: 257 AIGN 260
A G+
Sbjct: 3314 ACGS 3317
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 171/353 (48%), Gaps = 25/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
VVY +G N GQL + + +P SL ++ Q G ++ G+VYA G
Sbjct: 3545 VVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYT 3604
Query: 225 SFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
G G K V +PQLV+ L NI V G LS G VY + G+D +
Sbjct: 3605 ESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGK 3664
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LG +P L+ +L + ++ IA G + A++ +Y+ G G G+LGHG
Sbjct: 3665 LGLGNRVTHSKPQ-LVQSLSDKCIIDIACGGFHSAAIS---RYGHLYTWGKGRYGRLGHG 3720
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEEC 400
D +P+L++ L+N V VA G+ A V D V +WG G YG LGH E
Sbjct: 3721 DYEDYLYPKLVQG--LINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISES 3778
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+P +++L+ I + G + +S +G +Y++G G+ LGH + +
Sbjct: 3779 CKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGS--------SEH 3830
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V P+ V+ L+ +++VQ S T S+ H ALT+ G++YA+G D+GQLG
Sbjct: 3831 VRKPKPVSGLQ--GKKIVQFS-TGSL----HVLALTDDGEVYAWGDNDEGQLG 3876
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 173/362 (47%), Gaps = 25/362 (6%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIR 192
LA ++ + +Q I G AVTS G VY+ G SG+LG G + P+ ++
Sbjct: 3569 LACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQ 3628
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
L I + +G + +S G+VYA+G G+ G + T + PQLV+SL +
Sbjct: 3629 GLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTH--SKPQLVQSLSDKC 3686
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++ A G F +A +SR G +YT+ G RLGH + + P + G L N VV++A G
Sbjct: 3687 IIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQG-LINYHVVKVACG 3745
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ C S V+S G G GKLGH K P IE + + + G+
Sbjct: 3746 SGDAQTM-CVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGI--IQIDCGSQF 3802
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ + +G + TWG G Y LGHG+ E PK V L K + +TG +++DG
Sbjct: 3803 SVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDG 3862
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+VY++G + L G G H + P+ + +LK +R+ Q+S +AH+
Sbjct: 3863 EVYAWGDNDEGQL-------GDGTAHP-IARPRPIAALK--GKRIQQVSCG-----SAHS 3907
Query: 493 FA 494
FA
Sbjct: 3908 FA 3909
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 165/372 (44%), Gaps = 28/372 (7%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
I V S+ VY +G N GQLG + RP +L ++ I+ G+ ++S+ G+
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGK 2646
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTF 275
V+ G S G G+ V+SP+ + L + A+ G LS +G+V ++
Sbjct: 2647 VFVCGDSSGGRL--GIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSW 2704
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G D +LGH + ++ L+ +L V IA G + A+ S +Y+ G G
Sbjct: 2705 GDGEDGKLGH-GDILTLDTPKLIDSLLAKRVFYIACGSAHSAAIT---SDGELYTWGQGQ 2760
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LGH + P+L+++F N+ V + + +G V +WG G +G LG
Sbjct: 2761 YGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR 2820
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G + P+ V+ L + + + G + ++ G V+++G GE LG G+G
Sbjct: 2821 GGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGL-----GRG 2875
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+V P LV LK V + + H A++ G +Y +G D GQ G
Sbjct: 2876 ---EHVRRPTLVNQLKLVTIDHIAVG-------TLHCIAVSTQGDVYCWGDNDHGQQG-- 2923
Query: 516 LVNNQTERGNPE 527
N T N E
Sbjct: 2924 ---NGTTNANQE 2932
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 163/376 (43%), Gaps = 17/376 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 206
+ + G V+++G V+ G +S G+LG + PR I L I+ + +G
Sbjct: 2630 EIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGG 2689
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
M +S G+V ++G G+ +G T + +P+L++SL V A G+ +A +
Sbjct: 2690 KHAMALSLDGKVLSWGDGEDGKLGHGDILT--LDTPKLIDSLLAKRVFYIACGSAHSAAI 2747
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +YT+ G RLGH E + P L+ + Q+A G LA G
Sbjct: 2748 TSDGELYTWGQGQYGRLGHSDEVSQHTP-KLVKEFVGKNITQVACGSRDAQTLALDSEG- 2805
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VYS G G GKLG G P+ +E+ L+ + V + GA + + G+V TWG
Sbjct: 2806 NVYSWGDGDFGKLGRGGSDGCCTPQKVER--LVGHRVVQIECGAQFSVALTATGQVWTWG 2863
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LG G E P +V L V H+A G VS GDVY +G +
Sbjct: 2864 KGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQ-- 2921
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G G +AN P+LVT+ + V + SI W L S + F
Sbjct: 2922 -----QGNGTTNANQ-EPRLVTNFNNIKINRVGCGSSQSIAWKCPVLPLLMSHEHVQF-T 2974
Query: 507 GDKGQLGIELVNNQTE 522
K +G +N E
Sbjct: 2975 RIKDSMGATALNENVE 2990
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+AVT KG VYS+G N G LGHG + P PI + + ++ + G +++ G
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVYT 274
++Y +GK + + +P+LV+S+ V + + G+ T LSREG V++
Sbjct: 565 KLYMWGK--------ILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFS 616
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F + N R G + +V P ++ E I + YC+ A V++ G G
Sbjct: 617 FEYRNSDR-GCDDKSLNVIPSMIVFDYE------IVSIYCHNDVNAVIDCANNVFTWGRG 669
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
LGH + P+ ++ L Q ++ + + G+V WG
Sbjct: 670 NNNMLGHNNSFRVNRPKEVK--FLSGKQVTSLSLADDYILALTDTGQVYCWG 719
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+++ G +Y++G +LGHG++E +P+P+ LQG +I+Q + G+
Sbjct: 3795 QIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLH 3854
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++D G+VYA+G + E + G + P+ + +LK + Q + G+
Sbjct: 3855 VLALTDDGEVYAWGDND--EGQLGDGTAHPIARPRPIAALKGKRIQQVSCGS-------- 3904
Query: 269 EGRVYTFSWGND 280
++F+W ++
Sbjct: 3905 ---AHSFAWASE 3913
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
Q LN +P W+ G V WG G L + P +L+ +K
Sbjct: 3525 LQWLNSKP-----DDWNMTWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKP 3579
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN-RHANVLTPQLVTSLKQVN 474
V G+ T F V+ G VY+ G ES LG G N ++ V+TPQLV L
Sbjct: 3580 TQVIGGEQTMFAVTSYGKVYASGYTESGRLGI-----GPYNPKNPYVVTPQLVQGLNN-- 3632
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
++++++ + H AL+ +G++YA+G GD G+LG+ N+ P+ V
Sbjct: 3633 --IIKVAVNSG---GRHCLALSTTGEVYAWGDGDDGKLGL---GNRVTHSKPQLV 3679
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ ++ G+VY++G + FG +G + + T P+ + + + VV + G F A ++ +
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPT-PEPIVAFSKLIVVMVSCGKDFCAAVTED 563
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G++Y WG ++ H + N L+ ++ V +++ G LA G V+
Sbjct: 564 GKLYM--WG---KILHSS--NCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGY-VF 615
Query: 330 SVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
S + + R D+K +I + + + V + AV+ V TWG G
Sbjct: 616 SF------EYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRG 669
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
LGH N + PK V+ L+ + ++ D +++ G VY +G
Sbjct: 670 NNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 172/352 (48%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4000 GA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4057
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L + VV IAAG + AC + +++ G G G+LGH
Sbjct: 4058 KLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKGRYGRLGH 4113
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L++ Q + V +G + D V +WG G YG LG G +
Sbjct: 4114 GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4173
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P + +L + V G + +++ G VY++G G+ LGH + +V
Sbjct: 4174 KIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHV 4225
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4226 RRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4270
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 178/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2936 GLESAGTIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2995
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G++YA G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V
Sbjct: 2996 EGKIYACGEATNGRLGLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3054
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 3055 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 3110
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG + P+L++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3111 LGEYGRLGHGDNATQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3168
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3169 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3227
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3228 -------DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3273
Query: 511 QLG 513
Q G
Sbjct: 3274 QQG 3276
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 175/366 (47%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3968 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4027
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 4028 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4085
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 4086 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4144
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L M V+S G G GKLG G K P I+ L L V G+ + +
Sbjct: 4145 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKIPMKID--SLTGLGVTKVECGSQFSVALT 4201
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4202 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4261
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ T T
Sbjct: 4262 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 4311
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4312 AGKLPA 4317
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 246
P +SL + + Q +++S +G VY Q K T +P L+
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 474
Query: 247 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
SL + +V+ A G + A LS G V+++ G+ RLGH EP + G
Sbjct: 475 SLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGK 533
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 534 QAGKHVVHIACGSTYSAVITIDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 590
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 591 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ +L+ ++VV +
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRFPKLLDTLQ--GKKVVDV 700
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
++ ++ H ALT+ G+++++G+ DK Q L N + + P
Sbjct: 701 AVGST-----HCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKALP 741
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 40/293 (13%)
Query: 231 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G+ G KL V+ P +SL ++ V Q +LS G VYT ++
Sbjct: 414 WGLLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNY---------- 463
Query: 288 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ + P L+ +L + +V++AA G Y LAL+ S V+S GCG GG+LGHG
Sbjct: 464 KSTTLAPM-LIHSLSSRKIVKLAAHPDGQHY-LALS---SNGEVFSWGCGDGGRLGHGDA 518
Query: 345 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
T + P +I F + V +A G+ ++AV+ DG + TWG G YG LGHG+ E ++
Sbjct: 519 TYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQT 578
Query: 403 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
P +V AL +K + VA +GD T V+E+G V+S+G G+ LG +DG
Sbjct: 579 TPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG------- 630
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP+LV L+ ++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 631 CKTPKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 676
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G +Y+ G ++G+LG G + PR I +L ++ +
Sbjct: 2979 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 3038
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3039 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3096
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 3097 SAAITSSGELYSWGLGEYGRLGHGDNATQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3155
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3156 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3211
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G
Sbjct: 3212 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3268
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 108/169 (63%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S +T G +Y++G + G+LGHG++E++ P + +L+G++++ A G+G +T+
Sbjct: 545 GSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 604
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+LVE L+++ +V+ G+ F+ L+++G
Sbjct: 605 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 662
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH T+ + P LL TL+ VV +A G + LAL
Sbjct: 663 QVYTWGKGDNQRLGHGTDEHVRFPK-LLDTLQGKKVVDVAVGSTHCLAL 710
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3040 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3099
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y++G +G +G T+L P+LV+ L V+Q A G + T L+ E
Sbjct: 3100 ITSSGELYSWGLGEYGRLGHGDNATQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3157
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3158 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3209
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3210 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYA 3266
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG +G G+G P +VQ L K VA G
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A++S G V+S+G G+LGHG P I + G + ++ A G+ + +
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAV 551
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T+P LV +LK + VV A G+ T ++
Sbjct: 552 ITIDGELYTWGRGNYGRLGHGSSEDQ--TTPMLVTALKGLKVVDVACGSGDAQTLAVTEN 609
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 610 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 665
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+ G G +LGHG+ + P+L++ Q + V VA G+ H + DG V +WG
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTLQ--GKKVVDVAVGSTHCLALTDDGEVHSWG 720
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3934 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVTADG 3992
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 3993 K---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4049
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G LGHGN P+V+++L V+ + +A G + ++ G+++++G G
Sbjct: 4050 SWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH D L P+LV +L+ RV+ ++ + +A T LT+ +++
Sbjct: 4110 RLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVWS 4156
Query: 504 FGAGDKGQLG 513
+G GD G+LG
Sbjct: 4157 WGDGDYGKLG 4166
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ + LQ + I++ G+ ++
Sbjct: 598 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 657
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ GQVY +GK G+ + GT + V P+L+++L+ VV A+G+ L+ +G
Sbjct: 658 LTKDGQVYTWGK---GDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDG 714
Query: 271 RVYTFSWGNDARLGH-HTEPNDVEPHPLLG 299
V+ SWG++ +L H T N +P L G
Sbjct: 715 EVH--SWGSNDKLQHFDTLSNKKQPKALPG 742
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3188 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3242
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3243 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3300
Query: 257 AIGN 260
A G+
Sbjct: 3301 ACGS 3304
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S+A+T G VY++G + +LGHGT E P+ + +LQG +++ A G+ + +
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLAL 710
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+D G+V+++G + + + K P+ + LK+I + G F
Sbjct: 711 TDDGEVHSWGSNDKLQHFDTLSNKK---QPKALPGLKHIVGISCGPGQSF 757
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4006
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4007 KLYATGYGA--GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L VV +AAG + AC + +Y+ G G
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPR-VIESLRGTEVVDVAAGGAHS---ACVTAAGDLYTWGKG 4120
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4235
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H +E G++Y +G D+GQLG
Sbjct: 4236 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCSEDGEVYTWGDNDEGQLG 4284
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3242
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHG 3288
Query: 511 QLG 513
Q G
Sbjct: 3289 QQG 3291
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 171/355 (48%), Gaps = 18/355 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3991 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4050
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A G +A +
Sbjct: 4051 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACV 4108
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 4109 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQTL-CLTDDD 4166
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 4167 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++G + LG
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4284
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
DG N + P+LV +L+ V +++ W+ A +GKL
Sbjct: 4285 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKL 4329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3053
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3286 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 725
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 162/323 (50%), Gaps = 15/323 (4%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQG++I Q A G
Sbjct: 69 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 128
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AGQV ++G++ G+ G L+ PQ +++ + + V A G TA +
Sbjct: 129 SHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFEGVCVKMIAAGAEHTAAV 186
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++E +V +A G+ + + ++ +
Sbjct: 187 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEK-VSSVEGEKMVLVACGWRHTITVSDSGN-- 243
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + +G W H + +G++ W
Sbjct: 244 -LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQI---SGGWRHTMALTSEGKLYGW 299
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G GN + P V D K VA G T +SE +V+S+G G S L
Sbjct: 300 GWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 359
Query: 446 GHNAIADGQGNRHANVLTPQLVT 468
G+ I D R+ VL L T
Sbjct: 360 GNGEIVD----RNTPVLIDALST 378
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 25/372 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + V+ S+G GQLGHG E+ P + I GA T
Sbjct: 21 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTA 80
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D QVY++G FG +G + V +PQ V++L+ + + Q A G+ ++ G
Sbjct: 81 YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 138
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V ++ + +LG T + + P + E + V IAAG + A+ +Y
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFEGVCVKMIAAGAEHTAAVTEDGD---LYG 194
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 252
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP ++AL D ++ G T ++ +G +Y +G + +G
Sbjct: 253 GQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV--- 309
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G + H + + ++++ Q++ W HT AL+E ++++G G G
Sbjct: 310 --GNNDDHCSPVQVHFPE-----DQKISQVACG----WR-HTLALSEKKNVFSWGRGTSG 357
Query: 511 QLGI-ELVNNQT 521
QLG E+V+ T
Sbjct: 358 QLGNGEIVDRNT 369
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 31/334 (9%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + + ++G+ G+ +G +LV P ++ +
Sbjct: 16 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPGITSVIC 73
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCY 315
G + TA E +VY++ WG+ RLGH + P P+ L+ + + QIA G +C
Sbjct: 74 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 132
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+ +A Q V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A
Sbjct: 133 AVTMAGQ-----VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK--MIAAGAEHTAA 185
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
V +DG + WGWGRYG LG G+ +P+ V ++ K + VA G T VS+ G++Y
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G + LGH D L P + +LK + + QIS W HT AL
Sbjct: 246 TYGWSKYGQLGHGDFED--------HLVPHKLEALK--DSTISQISGG----WR-HTMAL 290
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
T GKLY +G GQ+G V N + +P +V
Sbjct: 291 TSEGKLYGWGWNKFGQVG---VGNNDDHCSPVQV 321
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 177/356 (49%), Gaps = 29/356 (8%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P +L +R IQ A G I+ G+VYA G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGY 3673
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ G + VT P L+ESL+++FV + A+ G LS EG VY++ G D
Sbjct: 3674 GA--GGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDG 3731
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + P ++ +L VV +A G + A+ +Y+ G G G+LGH
Sbjct: 3732 KLGHGNKLPCDRPR-IIESLRGKDVVDVACGGAHSAAITALGE---LYTWGKGRYGRLGH 3787
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA---AVVGQDG-RVCTWGWGRYGCLGHGN 397
G D+ P+L+E LL + + VA G+ A A+ ++G V +WG G YG LG G
Sbjct: 3788 GDSDDQLKPKLVEA--LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGG 3845
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ +P +++L+ + I V G + +S +G VY++G G+ LGH D R
Sbjct: 3846 SDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGV--DEHVRR 3903
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V+T Q ++V+ IS T ++ H T+ G++Y +G D+GQLG
Sbjct: 3904 PKKVMTLQ--------GKKVISIS-TGAL----HCVVCTDQGEVYTWGDNDEGQLG 3946
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 183/372 (49%), Gaps = 29/372 (7%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
++ Q++ P S++ + VY +G N QLG + P+ + ++ I A G
Sbjct: 2682 KSQQSVIQPISSVSGAKR--VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGG 2739
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFT 263
+ L++ +G+ YA G+ S G G+ ++ V SP + +L V + A+ G
Sbjct: 2740 SKSLFLVTQSGKAYACGEGSNGR--LGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHA 2797
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ +GRV+++ G+D +LGH + ++ + L V +AAG + A+
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGH-GDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVT--- 2853
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGR 381
S +Y+ G G G+LGHG + P+ +E L+ + V V+ G+ A + + G
Sbjct: 2854 SSGELYTWGLGEYGRLGHGDNLTQLTPKRVES--LVGQRVVQVSCGSRDAQTLALVEGGL 2911
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V +WG G +G LG G E S P +V L+ + HV G + ++ +G VY++G G+
Sbjct: 2912 VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGD 2971
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH + ++H V P LV L+ ++V+ +S+ H A+T++G++
Sbjct: 2972 YFRLGHGS------DQH--VRWPTLVEGLR--GKKVIGVSVGA-----LHCLAVTDAGQV 3016
Query: 502 YAFGAGDKGQLG 513
+A+G D GQ G
Sbjct: 3017 FAWGDNDHGQQG 3028
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 167/350 (47%), Gaps = 25/350 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G A+TS G VY+ G + G+LG G E P + SLQ + + + A +G
Sbjct: 3651 QLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGG 3710
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ +S G+VY++G+ G+ +G KL P+++ESL+ VV A G +A
Sbjct: 3711 KHCLALSSEGEVYSWGEGEDGKLGHG---NKLPCDRPRIIESLRGKDVVDVACGGAHSAA 3767
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPS 324
++ G +YT+ G RLGH + ++P L+ L V+ +A G A
Sbjct: 3768 ITALGELYTWGKGRYGRLGHGDSDDQLKPK-LVEALLGYRVMDVACGSGDAQTCAITDEE 3826
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G V+S G G GKLG G K P IE L + + V G+ + + +G V T
Sbjct: 3827 GGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGI--IKVECGSQFSVALSNNGSVYT 3884
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G Y LGHG +E PK V L K I ++TG V ++ G+VY++G +
Sbjct: 3885 WGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQ 3944
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
LG DG + P+LV +L+ N+++ ++S +AHT A
Sbjct: 3945 LG-----DGTTT---GIQKPRLVAALQ--NKKINRVSCG-----SAHTVA 3979
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 10/272 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T+ G V+S+G G+LGHG PR I +L G R+ AAG+ +
Sbjct: 2792 SGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAA 2851
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
++ +G++Y +G +G +G T+L +P+ VESL VVQ + G + T L
Sbjct: 2852 VTSSGELYTWGLGEYGRLGHGDNLTQL--TPKRVESLVGQRVVQVSCGSRDAQTLALVEG 2909
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY++ G+ +LG P L+ L + V + G + +AL C VY
Sbjct: 2910 GLVYSWGDGDFGKLGRGGSEGCSSPC-LVDKLSGLGVCHVECGAQFSVALTCNGH---VY 2965
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + P L+E + + + V+ GA H V G+V WG
Sbjct: 2966 TWGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDND 3023
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G+G+ P +VQ ++ +K VA G
Sbjct: 3024 HGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 17/344 (4%)
Query: 150 AIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 206
++AG S+ VT G Y+ G S+G+LG G + P I +L +R + +G
Sbjct: 2735 SVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGG 2794
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+V+++G+ G+ +G + +P+ +E+L V A G+ +A +
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHG--DVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV 2852
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + P + +L VVQ++ G LA G+
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGDNLTQLTPK-RVESLVGQRVVQVSCGSRDAQTLALVEGGL 2911
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VYS G G GKLG G P L+++ L + V GA + + +G V TWG
Sbjct: 2912 -VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV--CHVECGAQFSVALTCNGHVYTWG 2968
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P +V+ L K I V+ G V++ G V+++G + G
Sbjct: 2969 KGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG 3028
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ +I NR P LV + + V ++S+ W A
Sbjct: 3029 NGSIT---VNRR-----PTLVQGIDGIKITRVACGSSHSVAWTA 3064
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 172/369 (46%), Gaps = 41/369 (11%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V S G + +GQLGH + +E P I L G RIIQ +G ++ +S G VY++G+
Sbjct: 3 VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62
Query: 226 -----FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
G+ G V P L++SL++ +++ A GNF + L+ G+VY WG
Sbjct: 63 EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVY--EWGQL 120
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG-MAVYSVGCGLGGK- 338
RL D++ L + + +I +++ SG Y G K
Sbjct: 121 HRLDESQSSLDIQSTNGLIEMPRLSSQRIIEA-----SVSQYLSGEKKAYDANGGTKPKD 175
Query: 339 ------LGHGSRTDEKHP-RLIEQFQLLNLQ------PVVVAAGAW-HAAVVGQDGRVCT 384
+ +++ KH ++I+ Q + +Q VV +G W +A V + GR+ T
Sbjct: 176 DDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYT 235
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG+ G LG GN S P++V+ L DV + V G +++ G+VYS+G G
Sbjct: 236 WGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQ 295
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH + + L P+ + ++NER+ Q++ ++ T + G LYAF
Sbjct: 296 LGHGNV--------KSYLHPKKIQQFVELNERIAQVACGSNF-----TMVRSVQGLLYAF 342
Query: 505 GAGDKGQLG 513
G G+ GQLG
Sbjct: 343 GHGEYGQLG 351
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 187/403 (46%), Gaps = 61/403 (15%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQL----GHGTTEEEW---RPRPIRSLQGIRIIQ 201
Q ++G HS+AV+ G VYS+G + GQL G+G +++ +P I+SLQ RII+
Sbjct: 38 QTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIK 97
Query: 202 AAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAA 257
A G ++ ++D G+VY +G + ++ +Q T L+ P+L +++A+
Sbjct: 98 VACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQR----IIEAS 153
Query: 258 IGNFFTAVLSREGRVYTFSWGNDAR------------------LGHHTEPNDVEPHPLLG 299
+ + LS E + Y + G + LG + N P
Sbjct: 154 VSQY----LSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQ--- 206
Query: 300 TLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+++IP VV ++ G+ + + A SG +Y+ G G+LG G+R P+L++
Sbjct: 207 -IQDIPEEVVDVSGGWAF--SAAVTKSG-RLYTWGFNEKGQLGLGNRWFHSTPQLVK--T 260
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 415
L+++ V V G H + G V +WG G +G LGHGN + PK +Q ++ +
Sbjct: 261 LIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERI 320
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTSLK 471
VA G T V S G +Y+FG GE LG + G + H P +V SL+
Sbjct: 321 AQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLE 380
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ N + HT +T+ ++Y +G G G LG+
Sbjct: 381 TK-------KIKNVACGHLHTIVVTDENEVYQWGWGSSGALGL 416
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 160/357 (44%), Gaps = 65/357 (18%)
Query: 153 GPGHSIAVTSKGVVYSFG---------SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
G HS+A+T G VY +G S+ Q +G E PR L RII+A+
Sbjct: 101 GNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIE---MPR----LSSQRIIEAS 153
Query: 204 AG---AGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-----KLV----TSPQLVESLKNI 251
+G G D EA Q K++ T P ++ +
Sbjct: 154 VSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE- 212
Query: 252 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPV 306
VV + G F+A +++ GR+YT+ + +LG H+ P L+ TL ++ +
Sbjct: 213 EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQ------LVKTLIDVNI 266
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V + G ++ A+ Q VYS G G+ G+LGHG+ HP+ I+QF LN + V
Sbjct: 267 VSVVCGRQHICAITDQGE---VYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQV 323
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDV 413
A G+ V G + +G G YG LG EE + S+P VV++L
Sbjct: 324 ACGSNFTMVRSVQGLLYAFGHGEYGQLG-STEETQHLDFGGRDNHFKYSIPIVVKSLETK 382
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
K +VA G T VV+++ +VY +G G S +L G GN+ L PQL+TSL
Sbjct: 383 KIKNVACGHLHTIVVTDENEVYQWGWGSSGAL-------GLGNKRFQ-LVPQLITSL 431
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 21/267 (7%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ + G + ++ +G++Y +G + G+ G+ ++PQLV++L ++ +V
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQL--GLGNRWFHSTPQLVKTLIDVNIVSVVC 271
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLL 317
G ++ +G VY++ G +LGH + + P + +E N + Q+A G + +
Sbjct: 272 GRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTM 331
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTD-------EKH-----PRLIEQFQLLNLQPVV 365
+ Q +Y+ G G G+LG T + H P +++ + ++ V
Sbjct: 332 VRSVQG---LLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNV- 387
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
A G H VV + V WGWG G LG GN+ + VP+++ +L+ + + G+ T
Sbjct: 388 -ACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHT 446
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIAD 452
VV DV SF + + AD
Sbjct: 447 IVV-RCSDVTSFAYDYKSLINEKKYAD 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGAG 207
+ G H A+T +G VYS+G GQLGHG + P+ I+ + RI Q A G+
Sbjct: 269 VVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSN 328
Query: 208 RTMLISDAGQVYAFGKDSFGE---------AEYGVQGTKLVTS-PQLVESLKNIFVVQAA 257
TM+ S G +YAFG +G+ ++G + S P +V+SL+ + A
Sbjct: 329 FTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVA 388
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+ T V++ E VY + WG+ LG + + P L+ +L + I AG + +
Sbjct: 389 CGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQ-LITSLSGEEIASITAGEKHTI 447
Query: 318 ALAC 321
+ C
Sbjct: 448 VVRC 451
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S AVT G +Y++G N GQLG G P+ +++L + I+ G I
Sbjct: 220 GWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAI 279
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREG 270
+D G+VY++G FG+ +G K P+ ++ N + Q A G+ FT V S +G
Sbjct: 280 TDQGEVYSWGLGVFGQLGHG--NVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQG 337
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----------PHPL-LGTLENIPVVQIAAGYCYLLAL 319
+Y F G +LG E ++ P+ + +LE + +A G+ + + +
Sbjct: 338 LLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+ VY G G G LG G++ + P+LI L + + AG H VV
Sbjct: 398 TDENE---VYQWGWGSSGALGLGNKRFQLVPQLIT--SLSGEEIASITAGEKHTIVV 449
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M+V SVG G+LGH S + P +IE LL + + +G H+ V + G V +W
Sbjct: 1 MSVLSVGQSKNGQLGHDSIKECLEPTVIE--GLLGKRIIQTVSGEAHSLAVSRFGDVYSW 58
Query: 386 GWGRYGCLG-----HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G + G LG G+++ V P ++++L + I VA G++ + +++ G VY +G
Sbjct: 59 GRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--------------PRPIRS 193
+Q G ++ + +G++Y+FG GQL G+TEE P ++S
Sbjct: 321 AQVACGSNFTMVRSVQGLLYAFGHGEYGQL--GSTEETQHLDFGGRDNHFKYSIPIVVKS 378
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L+ +I A G T++++D +VY +G S G G + +LV PQL+ SL +
Sbjct: 379 LETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLV--PQLITSLSGEEI 436
Query: 254 VQAAIGNFFTAVLSREGRVYTFSW 277
G T V+ R V +F++
Sbjct: 437 ASITAGEKHTIVV-RCSDVTSFAY 459
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 166/350 (47%), Gaps = 23/350 (6%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY +G N GQLG + P P +L + +Q G ++ G+VYA G +
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G + V+ P L+ S++++F+ + A G LS +G VY++ G D +L
Sbjct: 4013 GGRLGIGGIDS--VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKL 4070
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + P L+ L + VV IA G + AC + +Y+ G G G+LGHG
Sbjct: 4071 GHGNRVSYDRPK-LITALSGLEVVCIACGGAHS---ACLTARGRIYTWGKGRYGRLGHGD 4126
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
D+ P+L+E + V +G + D V +WG G YG LG G E +
Sbjct: 4127 SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKL 4186
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P + L ++ I V G + + + G VY++G G+ LGH + + +V
Sbjct: 4187 PMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGS--------YEHVRR 4238
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P VT ++ + +V I+ T S+ H A T++G++Y +G D+GQLG
Sbjct: 4239 PMRVTGMQ--GKMIVSIA-TGSL----HCVACTDTGEVYTWGDNDEGQLG 4281
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 171/352 (48%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P +L +R + A G+ ++S G+++A G+ +
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEGT 3118
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ + V++P+ L ++ V + A+ G L+ +G+VY++ G D +L
Sbjct: 3119 NGR--LGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKL 3176
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH +E L+ +L V+ IA G + AC + +Y+ G G G+LGHG
Sbjct: 3177 GHGNRIT-LEAPRLIESLAGERVISIACGSAHS---ACVTARGHLYTWGLGEYGRLGHGD 3232
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD--GRVCTWGWGRYGCLGHGNEECE 401
+ P+++E L N + + VA G+ A + G+V +WG G +G LG G +
Sbjct: 3233 DNIQLVPKMVEA--LANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGC 3290
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
++P V+ LN + V G + ++ DG+V+++G G+ LGH A+V
Sbjct: 3291 AIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGC--------DAHV 3342
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P LV +L+ RV+ +++ H A+T +++A+G D GQ G
Sbjct: 3343 RRPTLVEALR--GRRVIHVAVG-----ALHCLAVTSENQVWAWGDNDHGQQG 3387
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 9/291 (3%)
Query: 151 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG ++ + S G +++ G ++G+LG G + PR P S +R + +G
Sbjct: 3095 IAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGK 3154
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+VY++G+ G+ +G + T + +P+L+ESL V+ A G+ +A ++
Sbjct: 3155 HALALTADGKVYSWGEGEDGKLGHGNRIT--LEAPRLIESLAGERVISIACGSAHSACVT 3212
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH + + P ++ L N V+Q+A G LA G
Sbjct: 3213 ARGHLYTWGLGEYGRLGHGDDNIQLVPK-MVEALANYRVIQVACGSRDAQTLALTACG-K 3270
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P +E+ L + V GA + + +DG V TWG
Sbjct: 3271 VFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGV--TQVECGAQFSLALTRDGEVWTWGK 3328
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G Y LGHG + P +V+AL + IHVA G V+ + V+++G
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWG 3379
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 8/324 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G AVT G VY+ G + G+LG G + +P + S+Q + I + A +G
Sbjct: 3988 QLVGGEQTLFAVTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGG 4047
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + + P+L+ +L + VV A G +A L
Sbjct: 4048 KHCLALSADGEVYSWGEGEDGKLGHGNRVS--YDRPKLITALSGLEVVCIACGGAHSACL 4105
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ GR+YT+ G RLGH + + P L+ L + V+ +A G L C
Sbjct: 4106 TARGRIYTWGKGRYGRLGHGDSEDQLIPK-LVEALSSFRVIDVACGSGDAQTL-CITDDD 4163
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ + L+ + V G+ + + Q G V TWG
Sbjct: 4164 NVWSWGDGDYGKLGRGGSEGCKLPMRIDCLK--GLRVIKVECGSQFSVALCQCGSVYTWG 4221
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+ E P V + + +ATG ++ G+VY++G + LG
Sbjct: 4222 KGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG 4281
Query: 447 HNAIADGQGNRHANVLTPQLVTSL 470
Q R L ++ +L
Sbjct: 4282 DGTTLAAQRPRLLMALQVNIIPTL 4305
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 20/270 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T+ G VYS+G G+LGHG PR I SL G R+I A G+ +
Sbjct: 3151 SGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSAC 3210
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
++ G +Y +G +G +G +LV P++VE+L N V+Q A G + T L+
Sbjct: 3211 VTARGHLYTWGLGEYGRLGHGDDNIQLV--PKMVEALANYRVIQVACGSRDAQTLALTAC 3268
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G+V+++ G+ +LG P +VE L ++ V Q+ G + LAL
Sbjct: 3269 GKVFSWGDGDFGKLGRGGSDGCAIPMNVE------RLNSLGVTQVECGAQFSLALT---R 3319
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V++ G G +LGHG + P L+E + + + VA GA H V + +V
Sbjct: 3320 DGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWA 3377
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVK 414
WG +G G+G P +V + V+
Sbjct: 3378 WGDNDHGQQGNGTTCVNRRPALVAGVEGVQ 3407
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 19/263 (7%)
Query: 188 PRPIRSLQGIRIIQAAAGA-GRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
P + L+ I Q + + GR L S G +++G G +G T +PQ +
Sbjct: 514 PHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHG--DTAARDAPQPL 571
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
L + VV+ A G +AV++ G +YT+ G RLGH T N + P P+ NI
Sbjct: 572 HHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIE 631
Query: 306 -VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
++ +A G+ L C G AV G G G PR + + + V
Sbjct: 632 RIIDVALGWGEGSTLCCTWEG-AVQVFGEGEAGT-----------PRALSALAMFRVTRV 679
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
WHAA+ G+V TWG G LGHGN E +PK+V+AL +K + ++ G
Sbjct: 680 YTGE-HWHAALT-DGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASH 737
Query: 425 TFVVSEDGDVYSFGCGESASLGH 447
+S +G ++ +G E + +
Sbjct: 738 GIALSSEGVLFVWGTHERTQISN 760
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 120/280 (42%), Gaps = 28/280 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H + +S G +S+G G+LGHG T P+P+ L +++ AAG + +I+
Sbjct: 536 HYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSR 595
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G +Y +G+ + G +G L P +++ I V G T + EG V
Sbjct: 596 GALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQ 655
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
F G P L L V ++ G + AL G VY+ G
Sbjct: 656 VFGEGEAG-----------TPRA-LSALAMFRVTRVYTGEHWHAALT---DGGQVYTWGK 700
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G +LGHG+ K P+L+E Q + + V ++ GA H + +G + WG
Sbjct: 701 GDGYRLGHGNMESTKIPKLVEALQGIKI--VDLSLGASHGIALSSEGVLFVWG------- 751
Query: 394 GHGNEECES-VPKVVQALN-DVKAIHVATGDYTTFVVSED 431
H + + VP+ V+A N KA V++G F SE+
Sbjct: 752 THERTQISNPVPQPVKAFNPSFKANGVSSGPTQIFAWSEE 791
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 52/273 (19%)
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L +I + Q A +L+ +G VYT + + + PH L+ LE+ +
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYTLPY------------DTMTPH-LVPGLESKTIT 526
Query: 308 QIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
Q++ G YL C+ S +S G G G+LGHG P+ + L + + V
Sbjct: 527 QVSCHSLGRHYL----CRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHH--LAHHEVV 580
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATG- 421
VAAG +AV+ G + TWG G G LGHG E P+ V A N + I VA G
Sbjct: 581 RVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGW 640
Query: 422 -DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
+ +T + +G V FG GE+ TP+ +++L RV ++
Sbjct: 641 GEGSTLCCTWEGAVQVFGEGEAG-------------------TPRALSALAMF--RVTRV 679
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+W+A ALT+ G++Y +G GD +LG
Sbjct: 680 YTGE--HWHA---ALTDGGQVYTWGKGDGYRLG 707
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI----RSLQGIRIIQ 201
E + AG S +TS+G +Y++G + G+LGHGT E P+P+ +++ I +
Sbjct: 578 EVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVA 637
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
G G T+ + G V FGE E G +P+ + +L V + G
Sbjct: 638 LGWGEGSTLCCTWEGAVQV-----FGEGEAG--------TPRALSALAMFRVTRVYTGEH 684
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+ A L+ G+VYT+ G+ RLGH + P L+ L+ I +V ++ G + +AL+
Sbjct: 685 WHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPK-LVEALQGIKIVDLSLGASHGIALSS 743
Query: 322 Q 322
+
Sbjct: 744 E 744
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+V WG LG VP AL+ ++ +H+A G T F+VS DG +++ G G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LG G N NV TP+ L V R V + H ALT GK
Sbjct: 3118 TNGRLGL-----GHSN---NVSTPRANPYLSHVLVRRVAVHSGGK-----HALALTADGK 3164
Query: 501 LYAFGAGDKGQLG 513
+Y++G G+ G+LG
Sbjct: 3165 VYSWGEGEDGKLG 3177
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G S+A+T G V+++G +LGHG RP + +L+G R+I A GA
Sbjct: 3305 TQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGAL 3364
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
+ ++ QV+A+G + G+ G T + P LV ++ +
Sbjct: 3365 HCLAVTSENQVWAWGDNDHGQQGNGT--TCVNRRPALVAGVEGV 3406
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 177/352 (50%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
++ +G N GQLG P P +L +R IQ A G ++ G++YA G +
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 3998
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G+ GT V++P LVESL+++ + + A+ G LS +G V+++ G D +L
Sbjct: 3999 --GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4056
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + P L+ L I V+ IA G + AC S V + G G G+LGHG
Sbjct: 4057 GHGNRDSYDRPK-LIEALSGIGVIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHGD 4112
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECE 401
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4113 SEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4170
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P +++L + I V G + ++ G VY++G G+ LGH GN +V
Sbjct: 4171 KIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HV 4222
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++SG+++ +G D+GQLG
Sbjct: 4223 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVFTWGDNDEGQLG 4267
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 25/356 (7%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
++SK +V+ G N QLG + P L ++ I A G+ ++S G++Y
Sbjct: 2890 ISSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 2947
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSW 277
A G+ + G G+ V +P+ V L V + A+ G L+ +G+V+++
Sbjct: 2948 ACGEGTNGR--LGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3005
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
G D +LGH +E L+ +L V IA G + A+ S +Y+ G G G
Sbjct: 3006 GEDGKLGHGNRLT-LEKPKLIESLRTKRVRDIACGSSHSAAIT---SSGELYTWGLGEYG 3061
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LGHG + P+L+ Q + V + + ++G V +WG G +G LG G
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG 3121
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
E SVP V+ LN V + + G + +++ G+V+++G G+ LGH ++
Sbjct: 3122 SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT------DQ 3175
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
H TP + L+ ++V+ +++ H A+T+SG++YA+G D GQ G
Sbjct: 3176 HVRKPTP--IQGLR--GKKVIHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 3222
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 24/349 (6%)
Query: 151 IAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-- 207
IAG ++ AVT G +Y+ G + G+LG G T+ P + SLQ + I + A +G
Sbjct: 3975 IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGK 4034
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S G+V+++G+ G+ +G + + P+L+E+L I V+ A G+ +A ++
Sbjct: 4035 HCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACIT 4092
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G V T+ G RLGH + ++P L+ L + IA G L C
Sbjct: 4093 SQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDN 4150
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4151 VWSWGDGDYGKLGRGGSDGCKIPMKIES--LAGLGVIKVECGSQFSVALTRSGSVYTWGK 4208
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN + PK V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4209 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGD 4268
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+ Q P+LV SL+ + +V++ I +AHT AL+
Sbjct: 4269 GTVTAIQ--------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4302
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 12/273 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +P+ I SL+ R+ A G+ +
Sbjct: 2986 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAA 3045
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y +G +G +G T+L P+LV +L+ VVQ A G + T L+ E
Sbjct: 3046 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTTLQGHRVVQVACGSRDAQTLCLTEE 3103
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ G+ +LG PH + L ++ V+QI G + LAL SG V+
Sbjct: 3104 GLVFSWGDGDFGKLGRGGSEGCSVPHQ-VERLNSVGVMQIECGAQFSLALT--KSG-EVW 3159
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3160 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3216
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G GN P +V L+ V VA G
Sbjct: 3217 DHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 34/318 (10%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+++ Q A +++ GQV++ +S +P+ E L+ + VVQ
Sbjct: 523 LQVRQVACTENNIYILTTGGQVFSLHSNSSEN-----------IAPKAFEGLEGVHVVQI 571
Query: 257 A--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
A VLS V+++ G+ RLGH + P ++G E Q+ YC
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEK----QVCGIYC 627
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
A +++ G G G+LGHG+ D+ P ++ + + V + +G H+
Sbjct: 628 GASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSM 687
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
V +G + WG G +G LG+G+ C P VQ V + +G + +S DG +
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNGS--CNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGTL 745
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G G LGH + H+NV P+LV +L+ +++ +++ +AH A
Sbjct: 746 YTWGKGHGGRLGHG------NSEHSNV--PKLVRALE--GKKIADVAVG-----SAHCLA 790
Query: 495 LTESGKLYAFGAGDKGQL 512
LT SG+LY +G D Q+
Sbjct: 791 LTSSGELYGWGRNDYQQI 808
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 137/306 (44%), Gaps = 27/306 (8%)
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA--VLSREG 270
S + +++ G S YG + QL+ S+ + + V E
Sbjct: 474 SKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTEN 533
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y + G H ++ P G LE + VVQIAA +C + S V+S
Sbjct: 534 NIYILTTGGQVFSLHSNSSENIAPKAFEG-LEGVHVVQIAA-HCEGKHVMVLSSANEVWS 591
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G GG+LGHG ++HP +I L Q + GA ++A + G + TWG G Y
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMI--VGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY 649
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGHGN + + VP VQAL K + VA +GD + V+++G ++++G G+ LG N
Sbjct: 650 GRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLG-N 708
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAG 507
+G P + +L V+ IY + + AL+ G LY +G G
Sbjct: 709 GSCNGSP-------IPVQIDTLVNVSR----------IYSGSQFSVALSCDGTLYTWGKG 751
Query: 508 DKGQLG 513
G+LG
Sbjct: 752 HGGRLG 757
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTMLISDAGQ 217
+T+ G V+S SNSS E P+ L+G+ ++Q AA M++S A +
Sbjct: 538 LTTGGQVFSLHSNSS---------ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANE 588
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V+++G G +G +K P ++ L V G ++A ++ G ++T+
Sbjct: 589 VWSWGAGDGGRLGHGDTVSK--EHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGR 646
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
G RLGH + + P + L++ VV +A G ++ +G+ +++ G G G
Sbjct: 647 GTYGRLGHGNSDDKLVPTQV-QALKSYKVVDVALGSGDAHSMCVTDNGL-LFAWGDGDFG 704
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
KLG+GS P I+ L+N+ + +G+ + + DG + TWG G G LGHGN
Sbjct: 705 KLGNGSCNGSPIPVQIDT--LVNVSRIY--SGSQFSVALSCDGTLYTWGKGHGGRLGHGN 760
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
E +VPK+V+AL K VA G ++ G++Y +G
Sbjct: 761 SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 124/237 (52%), Gaps = 16/237 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H + ++S V+S+G+ G+LGHG T + P I L ++ GA + I+ A
Sbjct: 579 HVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIA 638
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G+++ +G+ ++G +G KLV P V++LK+ VV A+ G+ + ++ G ++
Sbjct: 639 GELFTWGRGTYGRLGHGNSDDKLV--PTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLF 696
Query: 274 TFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ G+ +LG+ + + P P+ + TL N V +I +G + +AL+C + +Y+ G
Sbjct: 697 AWGDGDFGKLGNGS--CNGSPIPVQIDTLVN--VSRIYSGSQFSVALSCDGT---LYTWG 749
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G GG+LGHG+ P+L+ + + VA G+ H + G + +GWGR
Sbjct: 750 KGHGGRLGHGNSEHSNVPKLVRALEGKKIAD--VAVGSAHCLALTSSGEL--YGWGR 802
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 95/170 (55%), Gaps = 9/170 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G ++++G + G+LGHG ++++ P +++L+ +++ A G+G +M
Sbjct: 628 GASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSM 687
Query: 211 LISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++D G ++A+G FG+ G G+ + P +++L N+ + + G+ F+ LS +
Sbjct: 688 CVTDNGLLFAWGDGDFGKLGNGSCNGSPI---PVQIDTLVNVSRIYS--GSQFSVALSCD 742
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G +YT+ G+ RLGH + P L+ LE + +A G + LAL
Sbjct: 743 GTLYTWGKGHGGRLGHGNSEHSNVPK-LVRALEGKKIADVAVGSAHCLAL 791
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA
Sbjct: 3141 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3200
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS- 267
+ ++D+GQVYA+G + G+ G T + P LV L +FV + A G+ + S
Sbjct: 3201 CLAVTDSGQVYAWGDNDHGQQ--GSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3258
Query: 268 -------REGRVYTFSWGNDARLGHH--TEPNDVEP---HPLLGTL 301
+ F+ D GH +D EP HP +GT+
Sbjct: 3259 PQNPSEKDKKEPVPFAVSKDPLGGHSLGIHASDTEPTTAHPQVGTV 3304
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 52/355 (14%)
Query: 204 AGAGRTMLISDAGQVYAFGKDS------FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
AGA L+ Q+ +FG S FG E + + +T P+ N+ + QAA
Sbjct: 393 AGAPLVSLLKRYEQIESFGSYSAVDSFHFGPTESFL---RFLTLPE--NETTNVDLKQAA 447
Query: 258 I----------------GNFFTAV-LSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 298
+ GN+ T V S+ +++T W + + G +E + L+
Sbjct: 448 VIIISHLDRLAKPHLPAGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQ-LM 506
Query: 299 GTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G++ I + +AC + + + + G + H + ++ P+ E +
Sbjct: 507 GSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSL--HSNSSENIAPKAFEGLE 564
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
+++ + H V+ V +WG G G LGHG+ + P ++ L++ +
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
+ G + ++ G+++++G G LGH D L P V +LK +V
Sbjct: 625 IYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDK--------LVPTQVQALKSY--KV 674
Query: 478 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
V ++L + +AH+ +T++G L+A+G GD G+LG N + G+P V ID
Sbjct: 675 VDVALGSG---DAHSMCVTDNGLLFAWGDGDFGKLG-----NGSCNGSPIPVQID 721
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ +G S+A++ G +Y++G G+LGHG +E P+ +R+L+G +I A G+
Sbjct: 727 SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSA 786
Query: 208 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQL 244
+ ++ +G++Y +G++ + + GV ++ SP L
Sbjct: 787 HCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPIL 824
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+ VT G+++++G G+LG+G+ P P++ + + + +G+ ++
Sbjct: 681 SGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS--PIPVQIDTLVNVSRIYSGSQFSVA 738
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S G +Y +GK G +G ++ P+LV +L+ + A+G+ L+ G
Sbjct: 739 LSCDGTLYTWGKGHGGRLGHG--NSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGE 796
Query: 272 VYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIPVVQIAAGYC 314
+Y WG ND + P+ V P++ + L P ++I+ C
Sbjct: 797 LY--GWGRNDYQ---QICPSGVSRDPIIHSPILTTPPTLRISGMTC 837
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 168/352 (47%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G ++ +G N GQLG + P +L +R +Q G I+ G+V A G
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT V +P L+ES++++F+ + AI G LS EG VY++ G D
Sbjct: 3996 GA--GGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDG 4053
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P + +L VV IAAG + AC S +YS G G G+LGH
Sbjct: 4054 KLGHGNRSPCDRPRAI-ESLRGKEVVDIAAGGAHS---ACITSTGELYSWGKGRYGRLGH 4109
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L++ + + V +G + D V +WG G YG LG G +
Sbjct: 4110 GDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 4169
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP + AL + I V G + +++ G VY++G G+ LGH ++
Sbjct: 4170 KVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGT--------EDHI 4221
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ T+L+ +++V I+ + H A T++G++Y +G D+GQLG
Sbjct: 4222 RRPRRCTTLQ--GKKIVSIACG-----SLHCVACTDAGEVYTWGDNDEGQLG 4266
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 22/350 (6%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P +L ++ +Q G+ ++ G+++A G+ +
Sbjct: 2916 VFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEAT 2975
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ V P+ + SL + + A+ G L+ +G+V+++ G+D +L
Sbjct: 2976 NGRLGLGISAGN-VPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3034
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + N +P L+ L + V IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3035 GHFSRMNCDKPR-LIEALRSKRVRDIACGGSHSAAII---SNGDLYTWGLGEYGRLGHGD 3090
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
T + P+L++ + + V + + + G V +WG G +G LG G E SV
Sbjct: 3091 NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSV 3150
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P ++ LN V + G + +++ G V+++G G+ LGH A+V
Sbjct: 3151 PHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT--------DAHVRK 3202
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
PQLV +LK ++V +++ H ++ ++G++YA+G D GQ G
Sbjct: 3203 PQLVETLK--GKKVTHVAVG-----ALHCLSVLDNGQVYAWGDNDHGQQG 3245
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 10/285 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++++G VYS+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 4030 SGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSAC 4089
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y++GK +G +G ++ T P+LV++LK V A G+ T ++ +
Sbjct: 4090 ITSTGELYSWGKGRYGRLGHG--DSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDD 4147
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + L+ + V+++ G + +AL SG AVY
Sbjct: 4148 DSVWSWGDGDYGKLGRGGSDGCKVPMK-IDALQGLGVIKVECGSQFSVALT--KSG-AVY 4203
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + PR Q + V +A G+ H G V TWG
Sbjct: 4204 TWGKGDYHRLGHGTEDHIRRPRRCTTLQ--GKKIVSIACGSLHCVACTDAGEVYTWGDND 4261
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G LG G P++V AL K VA G + S + V
Sbjct: 4262 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPV 4306
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 155/344 (45%), Gaps = 19/344 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQG--IRIIQAAAG 205
Q + G VT G +++ G ++G+LG G + +PR + SL I+ + +G
Sbjct: 2951 QIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSG 3010
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
M ++ G+V+++G+ G+ G P+L+E+L++ V A G +A
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAA 3068
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ G +YT+ G RLGH + P L+ LE V+Q+A G LA SG
Sbjct: 3069 IISNGDLYTWGLGEYGRLGHGDNTTQLRPK-LVKALEGQRVIQVALGSRDAQTLALTDSG 3127
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
VYS G G GKLG G P IE+ + + + GA + + + G+V TW
Sbjct: 3128 -TVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV--CQIECGAQFSLALTKSGQVWTW 3184
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G Y LGHG + P++V+ L K HVA G V ++G VY++G +
Sbjct: 3185 GKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQ- 3243
Query: 446 GHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 488
QGN V P LV L+ V ++SI W
Sbjct: 3244 --------QGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAW 3279
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 18/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G ++T G V + G + G+LG G T+ P I S+Q + I + A +G
Sbjct: 3973 QLIGGEQTLFSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGG 4032
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+ +ESL+ VV A G +A +
Sbjct: 4033 KHCLALSAEGEVYSWGEGEDGKLGHGNRSP--CDRPRAIESLRGKEVVDIAAGGAHSACI 4090
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +Y++ G RLGH + +P L+ L+ V +A G L C
Sbjct: 4091 TSTGELYSWGKGRYGRLGHGDSEDQTKPK-LVDALKGYRVTDVACGSGDAQTL-CITDDD 4148
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+V+S G G GKLG G K P I+ Q L + + V G+ + + + G V TWG
Sbjct: 4149 SVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGV--IKVECGSQFSVALTKSGAVYTWG 4206
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG E+ P+ L K + +A G ++ G+VY++G + LG
Sbjct: 4207 KGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG 4266
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +S+ W+ T +GKL A
Sbjct: 4267 -----DGTTN---AIQRPRLVAALQGKKINRVACGSAHSLAWS--TNKPVNAGKLPA 4313
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 10/276 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+TS+G VYS+G+ G+LGHG T P I L G ++ A G+ + I+ +
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITAS 548
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G+++ +G+ SFG G+ T+ + +P LV L + VV A G+ T L+ G VY
Sbjct: 549 GELFTWGRGSFG--RLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVY 606
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G +LG P L+ L+ + V ++ G Y A+ C+ AV++ G
Sbjct: 607 SWGDGEYGKLGRGGSEGCKAPK-LVDKLQGLDVTRVYCGPQYSAAV-CKNG--AVFTWGN 662
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G KLGHG+ + PR +E L ++ G+ H ++G + +WG G L
Sbjct: 663 GEGYKLGHGTEEHVRFPRQVE--TLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQL 720
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G G+ ++ P +L I + TF S
Sbjct: 721 GEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFAWS 756
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 137/318 (43%), Gaps = 35/318 (11%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
IIQ A + +++ G+VY + ++ + + +L +I +++ A
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEIS------------TLADIEIIKLAA 483
Query: 259 ---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
G+ A L+ EG VY++ G+ +LGH P L+ L VV +A G +
Sbjct: 484 HSEGSHCLA-LTSEGDVYSWGNGDFGKLGHGDTVTCDSPM-LINELHGKSVVNVACGSHH 541
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
A+ SG +++ G G G+LG GS D P L+ + + V +G
Sbjct: 542 SAAITA--SG-ELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIA 598
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ G V +WG G YG LG G E PK+V L + V G + V ++G V+
Sbjct: 599 LADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVF 658
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G GE LGH + R L + VTSL + H A
Sbjct: 659 TWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLS---------------LGSHHCLAT 703
Query: 496 TESGKLYAFGAGDKGQLG 513
TE G+L ++G DKGQLG
Sbjct: 704 TEEGELLSWGRNDKGQLG 721
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G HS A+T+ G ++++G S G+LG G+TE+ P + L G+ ++ A G+G +T+
Sbjct: 538 GSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTI 597
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D G VY++G +G + G G++ +P+LV+ L+ + V + G ++A + + G
Sbjct: 598 ALADTGSVYSWGDGEYG--KLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNG 655
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G +LGH TE + P + TL V ++ G + LA + + S
Sbjct: 656 AVFTWGNGEGYKLGHGTEEHVRFPRQ-VETLAGKHVTSLSLGSHHCLATTEEGE---LLS 711
Query: 331 VGCGLGGKLGHG 342
G G+LG G
Sbjct: 712 WGRNDKGQLGEG 723
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 20/175 (11%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 415
L ++PV + G + DG+VC G+G G LG G + + P +++++ V +
Sbjct: 3966 LATMRPVQLIGGEQTLFSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRK 4025
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+ + +G +S +G+VYS+G GE LGH GNR + P+ + SL+ +
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWGEGEDGKLGH-------GNR-SPCDRPRAIESLR--GK 4075
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
VV I+ AH+ +T +G+LY++G G G+LG +QT+ P+ VD
Sbjct: 4076 EVVDIAAGG-----AHSACITSTGELYSWGKGRYGRLGHGDSEDQTK---PKLVD 4122
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G +IA+ G VYS+G G+LG G +E P+ + LQG+ + + G +
Sbjct: 591 SGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAA 650
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G + +G + + V P+ VE+L V ++G+ + EG
Sbjct: 651 VCKNGAVFTWGNGEGYKLGHGTE--EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE 708
Query: 272 VYTFSWGNDAR 282
+ SWG + +
Sbjct: 709 L--LSWGRNDK 717
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ GP +S AV G V+++G+ +LGHGT E PR + +L G + + G+
Sbjct: 639 TRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSH 698
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G++ ++G++ G+ G G K P SL ++ + T S
Sbjct: 699 HCLATTEEGELLSWGRNDKGQLGEGHTGLK--AEPAFAASLLGKCIIGITCSSAQTFAWS 756
Query: 268 REGR 271
R R
Sbjct: 757 RPSR 760
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 407 VQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
+ L D++ I +A G + + SE GDVYS+G G+ LGH +
Sbjct: 470 ISTLADIEIIKLAAHSEGSHCLALTSE-GDVYSWGNGDFGKLGHGDTVTCD--------S 520
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P L+ L S+ N + H+ A+T SG+L+ +G G G+LG+
Sbjct: 521 PMLINELHGK-------SVVNVACGSHHSAAITASGELFTWGRGSFGRLGL 564
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 174/356 (48%), Gaps = 34/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E PR I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
+ + + + + + PQL+ L++ ++Q + G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH TE V+ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 342 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 398
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT AL S GK+YAFG G GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGKVYAFGLGSSGQLG 336
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 21/306 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ GSN QLGH + RP+ I LQ IIQ + G+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +SD GQV ++G + G+ + + ++V P++V L + VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 321
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLG 330
Query: 441 ESASLG 446
S LG
Sbjct: 331 SSGQLG 336
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V G+V
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGKVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ PR I +Q V A G H + G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G Y LGH + P+++ L D I ++ G + +S+ G V S+G +
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH V P++V L V++ VVQI+ N+ H+ ALT G+L
Sbjct: 119 CGQLGH-------ATEKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
Y++G+ GQLG+ N+ T P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G+VY F G+ +LG + + + P ++G
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 190/442 (42%), Gaps = 81/442 (18%)
Query: 105 QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK- 163
Q R F+ E E +DL +KC SW +S+ K
Sbjct: 47 QSRKKFEEY-EQEGEDLMEKCMMSWP-----------------------NKYSLDQIKKY 82
Query: 164 -GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
V+SFG N+ G+LG G E P +R L +++I ++G + L+++ G+++ G
Sbjct: 83 HAYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCG 142
Query: 223 K---DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG- 278
D G E G+K P VE L IF+ Q A G++ T LS+EG+VY WG
Sbjct: 143 SNLHDKLG-LEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYV--WGG 197
Query: 279 --NDARLGHHTEPNDVEPHP--LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
++ R E D + LL + + QI G + LAL +YS G G
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLAL---DDNGTLYSWGVG 254
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+ GHG D++ P+ I+ F + + AG H + D +V WG GRYG G
Sbjct: 255 EKGECGHGKFEDQETPQRIKFFDGKII--TQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312
Query: 395 HGNEECESVPKVVQ---------ALNDV-------------KAIHVATGDYTTFVVSEDG 432
G E ++P++V L+D K +A G+ T V++ G
Sbjct: 313 FGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG 372
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++SFG + LGHN + N P+LV + +N + VQ++ + H+
Sbjct: 373 QIFSFGYNQQGQLGHNTV--------DNYCRPKLVEGM--LNHKTVQVAAGRN-----HS 417
Query: 493 FALTESGKLYAFGAGDKGQLGI 514
LT +YA G GQ G+
Sbjct: 418 LCLTNKNDVYACGNNQYGQCGL 439
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 122 KQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 181
++K +K VL AG+ Q G HS+A+ G +YS+G G+ GHG
Sbjct: 209 ERKDNAKYKPVLLQSFAGKKI-----KQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGK 263
Query: 182 TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGT---K 237
E++ P+ I+ G I Q AG T+ I+ QVYA+G +G+ +G + T +
Sbjct: 264 FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQ 323
Query: 238 LVTSP---------------QLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
LV P +++E K+ + Q A G T VL+ G++++F +
Sbjct: 324 LVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQG 383
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH+T N P + G L N VQ+AAG + L C + VY+ G G+ G
Sbjct: 384 QLGHNTVDNYCRPKLVEGML-NHKTVQVAAGRNHSL---CLTNKNDVYACGNNQYGQCGL 439
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
R E LL++ + AG +H+ VV
Sbjct: 440 PDR--EMRKTFSHVLSLLSVNSFKLYAGGFHSWVV 472
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 41/325 (12%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V++FG+++ GE G V P+ V L + V+ + G + +++ +G+++
Sbjct: 86 VWSFGQNTKGEL--GTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGS 143
Query: 278 GNDARLGHHT----EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+LG +P LL I + Q+A G + LAL+ + VY G
Sbjct: 144 NLHDKLGLEGITTGSKKTFKPVELL---TQIFIKQVACGDYHTLALSKEGQ---VYVWGG 197
Query: 334 GLGGKLGHGS--RTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
L K G S R D + P L++ F ++ + G +H+ + +G + +WG G
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQI--DCGDFHSLALDDNGTLYSWGVGE 255
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G GHG E + P+ ++ + + G++ T ++ D VY++G G G
Sbjct: 256 KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGE 315
Query: 450 IADGQGNRHANVLTPQLVTSLKQ----------VNERVVQI-----SLTNSIYWNAHTFA 494
N PQLV Q V + +++ + HT
Sbjct: 316 FE--------NTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLV 367
Query: 495 LTESGKLYAFGAGDKGQLGIELVNN 519
LT SG++++FG +GQLG V+N
Sbjct: 368 LTSSGQIFSFGYNQQGQLGHNTVDN 392
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q AG H++ +TS G ++SFG N GQLGH T + RP+ + + + +Q AAG
Sbjct: 356 KQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRN 415
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ +++ VYA G + +G+ G+ ++ + V SL ++ + G F + V+
Sbjct: 416 HSLCLTNKNDVYACGNNQYGQC--GLPDREMRKTFSHVLSLLSVNSFKLYAGGFHSWVVL 473
Query: 268 RE 269
E
Sbjct: 474 DE 475
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 176/375 (46%), Gaps = 35/375 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG G EE+ +++L+ ++ AG+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPPE-TKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 286 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
E D PL + + V Q+AAG + + L + V+S G
Sbjct: 126 EPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGH---VWS----WGQP 178
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 179 WPPGDIKQISVPVRVQGLERVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDT 234
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ S P VQ L+ + + +A G + + +++DG+VY +G GE LG N
Sbjct: 235 QPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD------NDK 288
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
++ + PQ V L V E +VQ+S + H+ ALT G++Y FG GD G+LG
Sbjct: 289 SSKMVPQRVNLL--VGEDIVQVSCGGT-----HSVALTRDGRMYTFGRGDHGRLGY---G 338
Query: 519 NQTERGNPERVDIDL 533
+ G P V ID+
Sbjct: 339 RKVTTGQPMEVPIDI 353
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P +++L + I+QAA G
Sbjct: 44 VAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA--------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ + D G+ YA+G + +G+ + G + + PQ S + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCAS--KLVVRQVAAGGT 161
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALA 320
+ VL+REG V+++ G P D++ + ++ + V+ IA G + LAL
Sbjct: 162 HSVVLTREGHVWSW--------GQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLAL- 212
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
Q G +++ G G+LG G P ++ L L V +AAG WH+ + DG
Sbjct: 213 -QEDG-TLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTL--VDIAAGGWHSTALTDDG 268
Query: 381 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V WG G +G LG G+ + S VP+ V L + V+ G + ++ DG +Y+FG
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFG 328
Query: 439 CGESASLGH 447
G+ LG+
Sbjct: 329 RGDHGRLGY 337
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 200
QA G H +AV +G Y++G N GQ G ++ RP+R + +
Sbjct: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVR 154
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+++G+ + K ++ P V+ L+ + ++ A+G
Sbjct: 155 QVAAGGTHSVVLTREGHVWSWGQ------PWPPGDIKQISVPVRVQGLERVRLI--AVGA 206
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
F L +G ++ +WGN+ +LG +P + G L + +V IAAG + A
Sbjct: 207 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPITVQG-LSGLTLVDIAAGGWHSTA 263
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 377
L VY G G G+LG G D+ + ++ LL + +V V+ G H+ +
Sbjct: 264 LT---DDGEVYGWGRGEHGRLGFGD-NDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALT 319
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
+DGR+ T+G G +G LG+G + P V
Sbjct: 320 RDGRMYTFGRGDHGRLGYGRKVTTGQPMEV 349
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+ + G VY+ GSNS GQLGH + P + +L +I + G G +M +
Sbjct: 41 GGQHSVFLMHDGSVYTCGSNSCGQLGH--DKAGISPEVVGALDTQKITMVSCGRGHSMAV 98
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
++ GQ++A+G G+ G T V P+LV+ L + + Q GN LSR+G++
Sbjct: 99 NEQGQLFAWGAGDGGQLGLGTTETT-VRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQL 157
Query: 273 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+T+ +LG EP+ + PHP L +L IP+ QI AG + AL+ SG AV+
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHP-LKSLAGIPLAQITAGGDHSFALSL--SG-AVFGW 213
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG + D P I + L Q VV ++ G H A + +DG + T+G G +
Sbjct: 214 GKNRAGQLGLNDKQDRAVPCHI---KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSW 270
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGESASLGHNA 449
G LGHG+ E +P+ V L + +A G + T V G VY+FGC LG
Sbjct: 271 GQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGI 330
Query: 450 IADGQ 454
+ D +
Sbjct: 331 LGDAR 335
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 121/226 (53%), Gaps = 12/226 (5%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 201
C SQ + G H +A++ G ++++G N+SGQLG G E + P P++SL GI + Q
Sbjct: 134 CDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQ 193
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
AG + +S +G V+ +GK+ G+ G+ + P ++ L++ VV + G+
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNRAGQL--GLNDKQDRAVPCHIKFLRSQKVVYISCGDE 251
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
TA L+++G ++TF G+ +LGH + +++ P +L L V QIA G + LA
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-ELMGTEVSQIACGRHHTLAFV- 309
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI------EQFQLLNL 361
PS VY+ GC G+LG G D + P + E F+++N+
Sbjct: 310 -PSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINI 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 31/350 (8%)
Query: 169 FGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
+G+ GQLG G + + PR G + + G ++ + G VY G +S G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+ + G SP++V +L + + G + ++ +G+++ + G+ +LG T
Sbjct: 64 QLGHDKAGI----SPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGT 119
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
V L+ L + + Q+ G + +AL+ +++ G G+LG G
Sbjct: 120 TETTVRIPRLVKRLCDHRISQVMCGNQHCVALS---RDGQLFTWGQNTSGQLGLGKGEPS 176
Query: 348 K---HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
K HP L + + AG H+ + G V WG R G LG +++ +VP
Sbjct: 177 KLFPHPLK----SLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP 232
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
++ L K ++++ GD T +++DG +++FG G LGH G N L P
Sbjct: 233 CHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGH-----GSTNSE---LLP 284
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
+ V L+ + V QI+ HT A SG +YAFG GQLG
Sbjct: 285 RRV--LELMGTEVSQIACGRH-----HTLAFVPSSGVVYAFGCNSHGQLG 327
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 32/345 (9%)
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
P+R R++ +AGA ++ + V +G+ G+ +G +L SP ++ +L+
Sbjct: 12 PVR-----RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL--SPTILSTLE 64
Query: 250 NIFVVQAAIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ ++ G T S VY++ WG+ RLGH + P P+ L + + Q
Sbjct: 65 GLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIR-QLHGLKIKQ 123
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
IA G + LA+ + V S G G+LG G+ D P+ I+ FQ + ++ +VAA
Sbjct: 124 IACGDSHCLAVTMEGQ---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIK--MVAA 178
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
GA H A V +DG + WGWGRYG LG G+ + VP+ V + K + VA G T V
Sbjct: 179 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISV 238
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S G +Y++G + LGH AD L P + +L+ + QIS W
Sbjct: 239 SSSGGLYTYGWSKYGQLGHGDYADH--------LIPHQLEALQ--GSFISQISGG----W 284
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
HT A+T GKLY +G GQ+G V + +R +P +V + L
Sbjct: 285 R-HTMAVTSDGKLYGWGWNKFGQVG---VGDNVDRSSPVQVKLPL 325
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 173/364 (47%), Gaps = 26/364 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S VV ++G GQLGHG ++ P + +L+G+ II GA T+
Sbjct: 21 AGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIA 80
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ VY++G FG +G + L T PQ + L + + Q A G+ ++ EG
Sbjct: 81 YSESHTDVYSWGWGDFGRLGHG-NSSDLFT-PQPIRQLHGLKIKQIACGDSHCLAVTMEG 138
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V ++ + +LG T + + P + + +P+ +AAG + A+ +Y
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFQGVPIKMVAAGAEHTAAVTEDGE---LYG 194
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 389
G G G LG G R D P E+ L + + +V+ A W H V G + T+GW +
Sbjct: 195 WGWGRYGNLGLGDRKDRLVP---EKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSK 251
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LGHG+ +P ++AL ++ G T V+ DG +Y +G + G
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNK---FGQVG 308
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+ D NV V + ++V+ IS W HT A+TE ++++G G
Sbjct: 309 VGD-------NVDRSSPVQVKLPLEQKVILISCG----WR-HTLAVTERQNVFSWGRGTN 356
Query: 510 GQLG 513
GQLG
Sbjct: 357 GQLG 360
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 19/308 (6%)
Query: 151 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
I G H+IA + S VYS+G G+LGHG + + + P+PIR L G++I Q A G
Sbjct: 72 ICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHC 131
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ ++ GQV ++G++ G+ G LV PQ +++ + + + A G TA ++ +
Sbjct: 132 LAVTMEGQVQSWGRNQNGQLGLGTTEDSLV--PQKIQAFQGVPIKMVAAGAEHTAAVTED 189
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 325
G +Y + WG LG + + P + ++P +V +A G+ + ++++ S
Sbjct: 190 GELYGWGWGRYGNLGLGDRKDRLVPEKV-----SLPHGEKMVMVACGWRHTISVS---SS 241
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 384
+Y+ G G+LGHG D P +E Q + + +G W H V DG++
Sbjct: 242 GGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQI---SGGWRHTMAVTSDGKLYG 298
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WGW ++G +G G+ S P V+ + K I ++ G T V+E +V+S+G G +
Sbjct: 299 WGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQ 358
Query: 445 LGHNAIAD 452
LG+ D
Sbjct: 359 LGNGECTD 366
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG GTTE+ P+ I++ QG+ I AAGA
Sbjct: 123 QIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEH 182
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G++Y +G +G G + +LV P+ V +V A G T +S
Sbjct: 183 TAAVTEDGELYGWGWGRYGNLGLGDRKDRLV--PEKVSLPHGEKMVMVACGWRHTISVSS 240
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L+ + QI+ G+ + +A+ S +
Sbjct: 241 SGGLYTYGWSKYGQLGHGDYADHLIPHQLE-ALQGSFISQISGGWRHTMAVT---SDGKL 296
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q +L Q V++ + W H V + V +WG
Sbjct: 297 YGWGWNKFGQVGVGDNVDRSSPV---QVKLPLEQKVILISCGWRHTLAVTERQNVFSWGR 353
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG+G +VP +++AL+
Sbjct: 354 GTNGQLGNGECTDRNVPVIIKALS 377
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G H++AVTS G +Y +G N GQ+G G + P ++ ++I + G
Sbjct: 278 SQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWR 337
Query: 208 RTMLISDAGQVYAFGKDSFGE 228
T+ +++ V+++G+ + G+
Sbjct: 338 HTLAVTERQNVFSWGRGTNGQ 358
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 175/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P +L +R +Q G + ++ G+VYA
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA--T 4025
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
G+ GT + +P L+ES+++IF+ + A+ G LS +G+VY++ G+D
Sbjct: 4026 GYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDG 4085
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + N + L+ L+ +V IA G + A+ +G +Y+ G G G+LGH
Sbjct: 4086 KLGHGNK-NGCDHPQLIDALQGKEIVDIACGGAHSAAVT---AGGEIYTWGKGRYGRLGH 4141
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E + + +G + D V +WG G YG LG G +
Sbjct: 4142 GDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4201
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P +++L + + V G + ++ G VY++G G+ LGH + + RH
Sbjct: 4202 KIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGS---DEHVRH--- 4255
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ + +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 4256 --PKKIAALQ--GKKIICIA-TGSL----HCVACSDLGEVFTWGDNDEGQLG 4298
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 168/345 (48%), Gaps = 16/345 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G +AVTS G VY+ G + G+LG G T+ P + S+Q I I + A +G
Sbjct: 4005 QLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGG 4064
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + PQL+++L+ +V A G +A +
Sbjct: 4065 KHCLALSTDGKVYSWGEGDDGKLGHGNKNG--CDHPQLIDALQGKEIVDIACGGAHSAAV 4122
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ TL V+ IA G L C
Sbjct: 4123 TAGGEIYTWGKGRYGRLGHGDSEDQMKPK-LVETLIGFKVIDIACGSGDAQTL-CITDDD 4180
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L V V G+ + + + G V TWG
Sbjct: 4181 NVWSWGDGDYGKLGRGGSDGCKIPMKIE--SLAGLGVVKVECGSQFSVALTRSGSVYTWG 4238
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG++E PK + AL K I +ATG S+ G+V+++G + LG
Sbjct: 4239 KGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG 4298
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
DG N + P+LV +L+ N V +S+ W+ +
Sbjct: 4299 -----DGTMNA---IHRPRLVVTLQGKNINRVACGSAHSLAWSTN 4335
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 20/353 (5%)
Query: 151 IAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAG 207
IAG S+ + S G +Y+ G ++G+LG G + P + SL I+ + +G
Sbjct: 3023 IAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGK 3082
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
M ++ G+V+++G+ G+ G + P+++E+LK+ + A G+ +A +S
Sbjct: 3083 HAMALTLDGKVFSWGEGEDGK--LGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAIS 3140
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G ++T+ G RLGH + P L+ L +VQ+A G LA G+
Sbjct: 3141 STGELFTWGLGEYGRLGHGDNLTQLRPK-LVKALLGHHIVQVACGSRDAQTLALSAEGL- 3198
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ L + ++ GA + + + G+V TWG
Sbjct: 3199 VFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGV--CMIECGAQFSLALTKFGQVYTWGK 3256
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG+++ P +V++L++ K +HVA G ++ G VY++G + G+
Sbjct: 3257 GDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW---NAHTFALTE 497
I NR P LV +L+ V V ++SI W + H +TE
Sbjct: 3317 GTIL---VNRK-----PSLVLNLEGVRVNRVACGSSHSIAWTTSDTHAPNMTE 3361
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 8/273 (2%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A A HS+A++ G VYS+G+ G+LGHG +P I L G +I + GA +
Sbjct: 526 AHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYS 585
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++ +G+VY +G+ ++G +G T P LV LK+ F+V A G+ L+
Sbjct: 586 AAVTSSGEVYTWGRGNYGRLGHGTSEDH--TVPTLVVGLKDYFIVDIACGSGDAQTLAVT 643
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAV 328
FSWG+ T +D P L +E + +++A YC +LA SG +V
Sbjct: 644 NTGLVFSWGDGGYGKLGTGGSDGSKTPKL--IEKLQDIEVARVYCGSQFSLALTKSG-SV 700
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHGS + P+L+E ++ V V +G H + DG V WG
Sbjct: 701 YTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRN 758
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G +G +E S P ++ L + + G
Sbjct: 759 DNGQVGETSETNVSEPTLLTLLQGKNIVDIDCG 791
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 170/352 (48%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P SL ++ I A G+ ++S G++YA G+ +
Sbjct: 2987 VFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGT 3046
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ + V +P + SL + + A+ G L+ +G+V+++ G D +L
Sbjct: 3047 NGR--LGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3104
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + P ++ L++ + IA G + A++ S +++ G G G+LGHG
Sbjct: 3105 GHDNRLSLDRPK-MIEALKSKRIRDIACGSSHSAAIS---STGELFTWGLGEYGRLGHGD 3160
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 401
+ P+L++ LL V VA G+ A + +G V +WG G +G LG G E
Sbjct: 3161 NLTQLRPKLVK--ALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGC 3218
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P ++ LN + + G + +++ G VY++G G+ LGH + ++H V
Sbjct: 3219 DIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGS------DQH--V 3270
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P LV SL + +++V +++ H T+ G++YA+G D GQ G
Sbjct: 3271 RKPTLVESLSE--KKIVHVAVG-----ALHCLCATDQGQVYAWGDNDHGQQG 3315
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 31/278 (11%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
L TSPQ +S++ + V Q + +L+ G+VY + ++ + E D
Sbjct: 464 LGTSPQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQCPEQIEGFDG----- 518
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ I + A + LAL+C VYS G G GG+LGHG P I +
Sbjct: 519 ----KEISKLAAHADGKHSLALSCDGD---VYSWGNGDGGRLGHGDNNSRDQPTKIT--E 569
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L+ + ++ GA ++A V G V TWG G YG LGHG E +VP +V L D +
Sbjct: 570 LVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVD 629
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+A +GD T V+ G V+S+G +DG TP+L+ E
Sbjct: 630 IACGSGDAQTLAVTNTGLVFSWG-DGGYGKLGTGGSDGSK-------TPKLI-------E 674
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ I + + + ALT+SG +Y +G GD +LG
Sbjct: 675 KLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG 712
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+Y+ G G G+LG G + P + ++ V V +G HA + DG+V +WG
Sbjct: 3039 LYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGE 3098
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G G LGH N PK+++AL + +A G + +S G+++++G GE LGH
Sbjct: 3099 GEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ L P+LV +L + +VQ++ + +A T AL+ G ++++G G
Sbjct: 3159 --------GDNLTQLRPKLVKAL--LGHHIVQVACGSR---DAQTLALSAEGLVFSWGDG 3205
Query: 508 DKGQLGIELVNNQTERGNPERVDI 531
D G+LG RG E DI
Sbjct: 3206 DFGKLG---------RGGSEGCDI 3220
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 33/328 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ S++ + + Q ++++ G+VY S + P+ +E
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQC------------PEQIEG 515
Query: 248 L--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
K I + A + LS +G VY++ G+ RLGH + +P + L
Sbjct: 516 FDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKI-TELVGKN 574
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ I+ G Y A+ S VY+ G G G+LGHG+ D P L+ + + +
Sbjct: 575 VIHISCGATYSAAVT---SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIA 631
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+G V G V +WG G YG LG G + PK+++ L D++ V G +
Sbjct: 632 CGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFS 691
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+++ G VY++G G++ LGH + +V P+LV L N + ++ S
Sbjct: 692 LALTKSGSVYTWGKGDNHRLGHGS--------ENHVRFPKLVEGL---NGKCIKKVAVGS 740
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
H ALT+ G++Y +G D GQ+G
Sbjct: 741 ----GHVLALTDDGEVYGWGRNDNGQVG 764
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 266 LSREGRVYTFSWGNDARL-----GHHTEPNDVE-PHPLLGT----LENIPVVQIAAGYCY 315
L+R+ +T +WG + H + VE P + T L + VQ+ G
Sbjct: 3953 LNRKPEDWTLTWGGSGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQT 4012
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
LLA+ S VY+ G G GG+LG G P L+E Q + ++ V V +G H
Sbjct: 4013 LLAVT---SDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLA 4069
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ DG+V +WG G G LGHGN+ P+++ AL + + +A G + V+ G++Y
Sbjct: 4070 LSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIY 4129
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G LGH D + P+LV +L + +V+ I+ + +A T +
Sbjct: 4130 TWGKGRYGRLGHGDSEDQ--------MKPKLVETL--IGFKVIDIACGSG---DAQTLCI 4176
Query: 496 TESGKLYAFGAGDKGQLG 513
T+ ++++G GD G+LG
Sbjct: 4177 TDDDNVWSWGDGDYGKLG 4194
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+V WG LG VP ++L +K IH+A G + F+VS DG +Y+ G G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEG 3045
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LG G N NV TP +TSL N+ V++ +S H ALT GK
Sbjct: 3046 TNGRLGL-----GHSN---NVATPCQLTSL---NQYVIKKVAVHS--GGKHAMALTLDGK 3092
Query: 501 LYAFGAGDKGQLG 513
++++G G+ G+LG
Sbjct: 3093 VFSWGEGEDGKLG 3105
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E ++ G S+A+T G VY++G + +LGHG+ P+ + L G I + A G
Sbjct: 680 EVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVG 739
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+G + ++D G+VY +G++ G+ G V+ P L+ L+ +V G
Sbjct: 740 SGHVLALTDDGEVYGWGRNDNGQV--GETSETNVSEPTLLTLLQGKNIVDIDCG 791
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E+ ++ G H + T +G VY++G N GQ G+GT +P + +L+G+R+
Sbjct: 3277 ESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRV 3336
Query: 200 IQAAAGAGRTM 210
+ A G+ ++
Sbjct: 3337 NRVACGSSHSI 3347
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
G GH +A+T G VY +G N +GQ+G + P + LQG I+ G +++
Sbjct: 738 VGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSI 796
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L LR ++A CR R + G HS+ + G VY+ G NS
Sbjct: 3 CWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNS 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G + G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQRVR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGHG+ E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 153/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G +S G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + +V A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH ++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT A SG +YAFG G +GQLG
Sbjct: 302 GRQ-----HTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT + +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + +V +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG +N++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---NPRRV 288
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGHGS DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ +G ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 175/359 (48%), Gaps = 23/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P +L +R +Q G ++ G
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADG 4003
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4004 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYS 4061
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L + VV IAAG + AC + +++ G G
Sbjct: 4062 WGEAEDGKLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKG 4117
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGHG D+ P+L++ Q + V +G + D V +WG G YG LG
Sbjct: 4118 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4177
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + +P + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4178 RGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 4232
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4233 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4281
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2947 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3006
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G++YA G+ + G G+ + + P+ + +L N + + A+ G L+ +G+V
Sbjct: 3007 EGKIYACGEATNGRLGLGL-SSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKV 3065
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 3066 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWG 3121
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P+L++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3122 LGEYGRLGHGDNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDF 3179
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E +VP+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3180 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3238
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3239 -------DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3284
Query: 511 QLG 513
Q G
Sbjct: 3285 QQG 3287
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 176/366 (48%), Gaps = 18/366 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3979 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4038
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 4039 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4096
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 4097 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 4155
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L M V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4156 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKIPMKID--SLTGLGVVKVECGSQFSVALT 4212
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4213 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4272
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ T T
Sbjct: 4273 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWS--TSKPTN 4322
Query: 498 SGKLYA 503
+GKL A
Sbjct: 4323 AGKLPA 4328
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 165/343 (48%), Gaps = 41/343 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 246
P ++L + + Q +++S +G VY+ Q K T +P L+
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS-------------QNYKSTTLAPMLIH 479
Query: 247 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
L + +V+ A G + A LS G V+++ G+ RLGH EP ++GT
Sbjct: 480 VLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPK-MIGTFNG 537
Query: 304 IP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
VV +A G Y A+ +Y+ G G G+LGHGS D+ P ++ F+ L
Sbjct: 538 KQAGKHVVHVACGSTYSAAITADGE---LYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGL 594
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 595 KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVC 654
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G + +++DG VY++G G++ LGH +V P+L+ SL+ ++VV
Sbjct: 655 CGSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRYPKLLDSLQ--GKKVVD 704
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+++ ++ H ALT+ G++ ++G+ DK Q L +N+ +
Sbjct: 705 VAVGST-----HCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQ 742
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G +Y+ G ++G+LG G + PR I +L I+ +
Sbjct: 2990 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAV 3049
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3050 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3107
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 3108 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 3166
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3167 DEGF-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3222
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G
Sbjct: 3223 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3279
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T+ G +Y++G + G+LGHG++E++ P + + +G++++ A G+G +T+
Sbjct: 550 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+LVE L+++ +V+ G+ F+ L+++G
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 667
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH T+ + P LL +L+ VV +A G + LAL
Sbjct: 668 QVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGKKVVDVAVGSTHCLAL 715
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 134/277 (48%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3110
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ +G++Y++G +G +G T+L P+LV+ L V+Q A G+ L+
Sbjct: 3111 ITSSGELYSWGLGEYGRLGHGDNTTQL--RPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3168
Query: 272 VYTFSWGND--ARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ FSWG+ +LG P ++E L V QI G + LAL S
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3220
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3221 GV-VWTWGKGDYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYA 3277
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG +G G+G P +VQ L K VA G
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3314
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 139/286 (48%), Gaps = 18/286 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A++S G V+S+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 497 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAA 556
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T+P +V + K + VV A G+ T ++
Sbjct: 557 ITADGELYTWGRGNYGRLGHGSSEDQ--TTPMVVTAFKGLKVVDVACGSGDAQTLAVTEN 614
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 670
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ ++P+L++ Q + V VA G+ H + DG V +WG
Sbjct: 671 TWGKGDNQRLGHGTDEHVRYPKLLDSLQ--GKKVVDVAVGSTHCLALTDDGEVLSWGSND 728
Query: 390 YGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
L H + + PK + LN + ++ G +F S +
Sbjct: 729 K--LQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWSSSSE 772
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ + LQ + I++ G+ ++
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 662
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + V P+L++SL+ VV A+G+ L+ +G
Sbjct: 663 LTKDGQVYTWGKGDNQRLGHGTD--EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGE 720
Query: 272 VYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAG 312
V SWG++ +L H N +P L G L + +V I+ G
Sbjct: 721 V--LSWGSNDKLQHFDTLFSNKKQPKALPG-LNSKHIVGISCG 760
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3199 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3253
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3254 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3311
Query: 257 AIGN 260
A G+
Sbjct: 3312 ACGS 3315
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 175/352 (49%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
++ +G N GQLG P P +L +R IQ A G ++ G++YA G +
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4438
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G+ GT VT+P LVESL+++ + + A+ G LS +G V+++ G D +L
Sbjct: 4439 --GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4496
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + P L+ L I V+ IA G + AC S V + G G G+LGHG
Sbjct: 4497 GHGNRDSYDRPK-LIEALSGIGVIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHGD 4552
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECE 401
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4553 SEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4610
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP +++L + V G + ++ G VY++G G+ LGH GN +V
Sbjct: 4611 KVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HV 4662
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 4663 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDGGEVFTWGDNDEGQLG 4707
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 162/342 (47%), Gaps = 17/342 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ + S+ G +Y+ G ++G+LG G P+ PI S ++ + +G
Sbjct: 3279 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3338
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
M ++ G+V+++G+ G+ +G + T + P+L+E+L+ + A G+ +A ++
Sbjct: 3339 HAMALTLDGKVFSWGEGEDGKLGHGNRLT--LEKPKLIETLRTKRIRDIACGSSHSAAIT 3396
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH ++P L+ L + VVQ+A G L G+
Sbjct: 3397 SSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTALADHRVVQVACGSRDAQTLCLTEEGL- 3454
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P +E+ + + + + GA + + + G V TWG
Sbjct: 3455 VFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGV--MQIECGAQFSLALTKSGEVWTWGK 3512
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P +Q L K IHVA G V++ G VY++G +
Sbjct: 3513 GDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ--- 3569
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
G GN N P LV L + V ++S+ W+
Sbjct: 3570 ----QGSGNTIVNK-KPSLVLGLDGIFVNRVACGSSHSVAWS 3606
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 24/349 (6%)
Query: 151 IAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-- 207
IAG ++ AVT G +Y+ G + G+LG G T+ P + SLQ + I + A +G
Sbjct: 4415 IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGK 4474
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S G+V+++G+ G+ +G + + P+L+E+L I V+ A G+ +A ++
Sbjct: 4475 HCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACIT 4532
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G V T+ G RLGH + ++P L+ L + IA G L C
Sbjct: 4533 SQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDN 4590
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G K P IE L L V G+ + + + G V TWG
Sbjct: 4591 VWSWGDGDYGKLGRGGSDGCKVPMKIE--SLAGLGVTKVECGSQFSVALTRSGSVYTWGK 4648
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN + PK V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4649 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGD 4708
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
++ Q P+LV SL+ + +V++ I +AHT AL+
Sbjct: 4709 GTVSAIQ--------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4742
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V +G N QLG + P L ++ I A G+ ++S G++YA G+ +
Sbjct: 3243 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGT 3302
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ V +P+ V L V + A+ G L+ +G+V+++ G D +L
Sbjct: 3303 NGR--LGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3360
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH +E L+ TL + IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3361 GHGNRLT-LEKPKLIETLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGD 3416
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV--GQDGRVCTWGWGRYGCLGHGNEECE 401
+ P+L+ L + + V VA G+ A + ++G V +WG G +G LG G E
Sbjct: 3417 NCTQLKPKLVTA--LADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC 3474
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S+P V+ LN V + + G + +++ G+V+++G G+ LGH ++H
Sbjct: 3475 SIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT------DQHVRK 3528
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP + L+ ++V+ +++ H A+T+SG++YA+G D GQ G
Sbjct: 3529 PTP--IQGLR--GKKVIHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3571
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 139/318 (43%), Gaps = 70/318 (22%)
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
+E + V Q A +L+ G+V + N HT P+ P P+ G LE++
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN-----CHT-PDTTAPKPIEG-LESV 628
Query: 305 PVVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+VQ+AA +C ++LAL V+S G G GG+LGHG + + P I L
Sbjct: 629 NIVQLAA-HCEGRHVLALTATGD---VFSWGNGEGGRLGHGDTSSKDIPTRI--VALAER 682
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT- 420
Q V G+ ++A + G + TWG G YG LGHGN E + +P +VQ L + IHVA
Sbjct: 683 QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALG 742
Query: 421 -GDYTTFVVSEDGDVYSFGCGESASLG-----------------------------HNAI 450
GD + V++ G VY++G G+ LG H ++
Sbjct: 743 CGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSV 802
Query: 451 ADGQGN----------------RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
A G+ + +P+ + +L+ N + + L AH A
Sbjct: 803 ALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGL-------AHCLA 855
Query: 495 LTESGKLYAFGAGDKGQL 512
LT SG+LY +G D QL
Sbjct: 856 LTASGELYGWGRNDFQQL 873
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 7/280 (2%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTML-ISDAGQV 218
TS ++ + G S Q + T + P+PI L+ + I+Q AA GR +L ++ G V
Sbjct: 592 TSIYILTTTGQVLSLQHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDV 651
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
+++G G +G +K + P + +L V G+ ++A ++ G +YT+ G
Sbjct: 652 FSWGNGEGGRLGHGDTSSKDI--PTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRG 709
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
RLGH + P ++ L+ V+ +A G +L +G+ VY+ G G GK
Sbjct: 710 TYGRLGHGNSEDKHLP-TIVQVLKQQRVIHVALGCGDAHSLCVTDTGI-VYAWGDGDFGK 767
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
LG+G+ P IE Q + V V +G+ + +G+DG V +WG G G LGHG+
Sbjct: 768 LGNGTCNGSSVPVAIELPQCSD-GAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHS 826
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
E + PK +QAL + +A G ++ G++Y +G
Sbjct: 827 EHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWG 866
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
A R+ + G +S A+T+ G +Y++G + G+LGHG +E++ P ++ L+ R+I
Sbjct: 678 ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI 737
Query: 201 QAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGV-QGTKL---VTSPQLVESLKNIFVV 254
A G G ++ ++D G VYA+G FG+ G G+ + + PQ + +F
Sbjct: 738 HVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFS- 796
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
G+ F+ L R+G VY++ G+ RLGH + P + LE +V +A G
Sbjct: 797 ----GSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKA-IQALEGKNIVDLAVGLA 851
Query: 315 YLLAL 319
+ LAL
Sbjct: 852 HCLAL 856
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA
Sbjct: 3490 QIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3549
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++D+GQVYA+G + G+ G T + P LV L IFV + A G+ + S
Sbjct: 3550 CLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWS 3606
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 11/236 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T+ G V+S+G+ G+LGHG T + P I +L ++ G+ + I+ A
Sbjct: 641 HVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAA 700
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G++Y +G+ ++G +G K + P +V+ LK V+ A+ G+ + ++ G VY
Sbjct: 701 GELYTWGRGTYGRLGHGNSEDKHL--PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ G+ +LG+ T P + + V++ +G + +AL + VYS G
Sbjct: 759 AWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGT---VYSWGK 815
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G GG+LGHG P+ I+ + N+ V +A G H + G + +GWGR
Sbjct: 816 GHGGRLGHGHSEHTASPKAIQALEGKNI--VDLAVGLAHCLALTASGEL--YGWGR 867
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+V WG LG +P L+ +K IH+A G + F+VS+DG +Y+ G G
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEG 3301
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LG G N NV TP+ V L Q + V + H ALT GK
Sbjct: 3302 TNGRLGL-----GHNN---NVPTPKQVPILSQYVVKKVAVH-----SGGKHAMALTLDGK 3348
Query: 501 LYAFGAGDKGQLG 513
++++G G+ G+LG
Sbjct: 3349 VFSWGEGEDGKLG 3361
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
C + +G S+A+ G VYS+G G+LGHG +E P+ I++L+G I+
Sbjct: 787 CSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDL 846
Query: 203 AAGAGRTMLISDAGQVYAFGKDSF 226
A G + ++ +G++Y +G++ F
Sbjct: 847 AVGLAHCLALTASGELYGWGRNDF 870
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 173/377 (45%), Gaps = 37/377 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLQGI 197
E ++ + AG S+A+T G VYS+G N G LGH + +P I L G
Sbjct: 77 EVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGK 136
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGE---AEYGVQGTKLVTS------------- 241
+I Q + G +++ G+VY +G FG+ E Q K+
Sbjct: 137 KIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSM 196
Query: 242 -PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
PQ +ESL NI Q A G FT VLS +G+VYTF + LG+ ++ N V L+
Sbjct: 197 LPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKD 256
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L +I V+I+AGY + A+ Q +Y+ G G+LG+ + P ++ F N
Sbjct: 257 LNDI--VKISAGYSFCAAITKQGK---LYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN 311
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
V V+ G A + Q G++ TWG+G G LGHGN+ P+ V+ K I +A
Sbjct: 312 -SIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF--KQKIIKIAC 368
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G ++ED +Y FG G LG I + + TP LV K ++VV +
Sbjct: 369 GGSHAAFITEDNQLYQFGRGSEGQLG---IGQNVASEASIRSTPNLVQYFK--GKQVVDV 423
Query: 481 SLTNSIYWNAHTFALTE 497
+ HT A+T+
Sbjct: 424 TCGGE-----HTIAITQ 435
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 44/321 (13%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------------ 187
E ++ Q G H AVT G VY++G+ G+LGH EEE +
Sbjct: 131 EKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGH---EEELKQEQKIKIKRGNL 187
Query: 188 ----------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
P+ I SL I+ Q A G T+++S+ G+VY FG + +G Y V
Sbjct: 188 SHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY-VSDQN 246
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPH 295
VT+PQL++ L +I V+ + G F A ++++G++YT WGN + +LG+ +P
Sbjct: 247 SVTTPQLIKDLNDI--VKISAGYSFCAAITKQGKLYT--WGNNRNGQLGNSQSLYQTKPS 302
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+ G +V ++ G ++ AL Q +Y+ G G G+LGHG+++D PR +E
Sbjct: 303 IVTGFGSQNSIVDVSCGDNFIAALTQQGQ---LYTWGFGGDGQLGHGNKSDLYAPRHVEF 359
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-----ECESVPKVVQAL 410
Q + + +A G HAA + +D ++ +G G G LG G S P +VQ
Sbjct: 360 KQKI----IKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYF 415
Query: 411 NDVKAIHVATGDYTTFVVSED 431
+ + V G T ++++
Sbjct: 416 KGKQVVDVTCGGEHTIAITQE 436
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 167/372 (44%), Gaps = 48/372 (12%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
+VYS+G GQLG + P I L +I + AG +M ++ G+VY++GK+
Sbjct: 50 IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--AR 282
G + + + +T P+ +E L + Q + G F A ++ +G VYT WGN +
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYT--WGNKEFGK 167
Query: 283 LGHHTEPNDVEPHPL------------------LGTLENIPVVQIAAGYCYLLALACQPS 324
LGH E + + + +L NI Q+A G + + L+
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS---E 224
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G LG+ S + P+LI+ + V ++AG A + + G++
Sbjct: 225 DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI----VKISAGYSFCAAITKQGKLY 280
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGES 442
TWG R G LG+ ++ P +V +I V+ GD +++ G +Y++G G
Sbjct: 281 TWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGD 340
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH +D RH + +++++I+ S H +TE +LY
Sbjct: 341 GQLGHGNKSDLYAPRHV------------EFKQKIIKIACGGS-----HAAFITEDNQLY 383
Query: 503 AFGAGDKGQLGI 514
FG G +GQLGI
Sbjct: 384 QFGRGSEGQLGI 395
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 111/277 (40%), Gaps = 91/277 (32%)
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR------------TDEK--------- 348
A G+ Y LA + VYS G G G+LG + TD+K
Sbjct: 33 AGGFIYQSILANEYPETIVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKS 92
Query: 349 ---------------------------------HPRLIEQFQLLNLQPVVVAAGAWHAAV 375
P IE+ LL + ++ G +H A
Sbjct: 93 ISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEK--LLGKKIKQISCGQFHMAA 150
Query: 376 VGQDGRVCTWGWGRYGCLGHGNE-------------------ECESVPKVVQALNDVKAI 416
V +DG V TWG +G LGH E + +P+ +++L ++KA
Sbjct: 151 VTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAK 210
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
VA G T V+SEDG VY+FG + SLG+ ++D +V TPQL+ L
Sbjct: 211 QVACGIQFTVVLSEDGKVYTFGYNQYGSLGY--VSD-----QNSVTTPQLIKDLND---- 259
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V+IS S A+T+ GKLY +G GQLG
Sbjct: 260 IVKISAGYSF-----CAAITKQGKLYTWGNNRNGQLG 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V +WG+G +G LG NE P ++ L D K V G + ++ +G+VYS+G +
Sbjct: 51 VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH + N+ P+ + L + +++ QIS H A+TE G++
Sbjct: 111 GGILGH------EDRLSFNMTQPERIEKL--LGKKIKQISCG-----QFHMAAVTEDGEV 157
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
Y +G + G+LG E Q ++ +R ++
Sbjct: 158 YTWGNKEFGKLGHEEELKQEQKIKIKRGNL 187
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 159/334 (47%), Gaps = 15/334 (4%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
K +R L A +Q AG H +A+ S G+VYS+G N GQLG GTT + + P+
Sbjct: 835 KTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQ 894
Query: 190 PIRSLQG--IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE---YGVQGTKLVTSPQL 244
P++ G + +Q +AG + I +VY +G +S G+ + Y +
Sbjct: 895 PVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADP 954
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLEN 303
+ + VQ ++ F L +G VYT+ + + +LG+ T + +P ++
Sbjct: 955 DNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQS 1014
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--NL 361
QI+AG + LA+ + ++ G G+LG GS +D+ P+ ++ +L
Sbjct: 1015 FQASQISAGSWHALAIDTDGN---TWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSL 1071
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ----ALNDVKAIH 417
+ ++AG H+ VV +DG + WGW G LG GN ++ P ++ KA+
Sbjct: 1072 KATQISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVR 1131
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
+ G + + +DG+++++G + LG+N A
Sbjct: 1132 SSAGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTA 1165
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 165/393 (41%), Gaps = 36/393 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR------SLQGIRIIQA 202
Q AG SI V S G Y++G+N GQL + + P+R + Q
Sbjct: 796 QVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQV 855
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
AAG + I G VY++G++ G+ G + P + VQ + G
Sbjct: 856 AAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVAD 915
Query: 263 TAVLSREGRVYTFSWGNDAR-LGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGYCYL 316
+A + E RVYT WG+++ G + +P + P VQ++ + ++
Sbjct: 916 SAAIDSENRVYT--WGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFV 973
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL + VY+ G G+LG+G+ + + + Q ++AG+WHA +
Sbjct: 974 MALDADGN---VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAI 1030
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDG 432
DG TWG+ YG LG G+ + P+ VQ D +KA ++ G + VV DG
Sbjct: 1031 DTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDG 1090
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++++G + LG N + ++K + S H+
Sbjct: 1091 SLWAWGWNSNGQLG-----------IGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHS 1139
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGN 525
A+ + G L+A+G GQLG NNQT N
Sbjct: 1140 LAIRQDGNLWAWGDNQYGQLG----NNQTATRN 1168
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 182/408 (44%), Gaps = 48/408 (11%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAA 203
SQ AG GH +AV S G +YS+GSN GQLG GTT E P P++ QG+ +QA+
Sbjct: 237 SQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQAS 296
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIG 259
AG ++ + G++Y++G +++G + G T +P+ V +N Q A+G
Sbjct: 297 AGYLFSVGLGSDGKLYSWGDNTYG--QLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVG 354
Query: 260 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLL------GTLENIPVVQIAA 311
+ L +G +Y SWG++ +LG T E H + G Q++
Sbjct: 355 SLHALGLGSDGNLY--SWGDNDHNQLGDGTT---TERHAPIQVKMPSGVPSGFAWKQMSG 409
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLL--NLQPVVVAA 368
+ LAL S +Y G G++G GS TD K P I Q + N
Sbjct: 410 WGWHSLALG---SDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQM 466
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV----KAIHVATGDYT 424
G +++ +G DG + TWG+G G +G+G+ P N V V+
Sbjct: 467 GDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVA 526
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV-TSLKQVNERVVQISLT 483
+ + DG++YS+G + LG N Q N V PQ T L V
Sbjct: 527 SLAIGSDGNLYSWGANNNGQLGDNTTT--QRNTPIRVAAPQNAPTGLTWVQA-------- 576
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
S W+ ++F L G LY++G GQLG N +R P RV++
Sbjct: 577 -SAGWDNNSFGLASDGNLYSWGKNANGQLGDNTTN---DRHIPGRVNM 620
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 170/414 (41%), Gaps = 76/414 (18%)
Query: 160 VTSKGVVYSFGS---NSSGQLGHGTTEEEWRPRPIRSL--------------QGIRIIQA 202
+ S V Y F N H T + W P++ +GIR Q
Sbjct: 180 IGSTPVAYDFNQPVINDMNLTAHWTKADAWSMSPVQGPVAGGTKVTLTPPGPRGIRFSQV 239
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK----LVTSPQLVESLKNIFVVQAAI 258
+AG G + ++ G +Y++G + G+ G + V PQ V ++ VQA+
Sbjct: 240 SAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVS--QDFTWVQASA 297
Query: 259 GNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAG 312
G F+ L +G++Y SWG++ +LG++T P P + +N P Q A G
Sbjct: 298 GYLFSVGLGSDGKLY--SWGDNTYGQLGNNTTTAHYTPEP-VNLPQNAPSGFTWKQEAVG 354
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--- 369
+ L L S +YS G +LG G+ T+ P ++ P V +G
Sbjct: 355 SLHALGLG---SDGNLYSWGDNDHNQLGDGTTTERHAPIQVK-------MPSGVPSGFAW 404
Query: 370 ------AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-----NDVKAIHV 418
WH+ +G D + WG G +G G+ + V A ++
Sbjct: 405 KQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQF 464
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA---NVLTPQLVTSLKQVNE 475
GDY + + DG++Y++G G + ++G+ + D G A N + P S KQV+
Sbjct: 465 QMGDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNF--SWKQVSL 522
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
V + A+ G LY++GA + GQLG N T+R P RV
Sbjct: 523 LSVA------------SLAIGSDGNLYSWGANNNGQLGD---NTTTQRNTPIRV 561
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDY 423
VAAG H +G +G V +WG +G LG G P+ V+ KA+ V+ G
Sbjct: 855 VAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVA 914
Query: 424 TTFVVSEDGDVYSFGCGESASLGHN-AIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+ + + VY++G ES G A + + N TP VQ+SL
Sbjct: 915 DSAAIDSENRVYTWGS-ESTGKGQTPAYSTTRKNP-----TPAADPDNPGQTLHAVQVSL 968
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
S AL G +Y +G GQLG ++ + NP R+
Sbjct: 969 NWSF-----VMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARL 1010
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 336 EEVCRMASDYSRTCASPDSIQAGEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 395
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E + I
Sbjct: 396 SFSDAQTIEA--GQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIK 453
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 454 KVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 513
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A++ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 514 GYRHSAAVS---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 566
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 567 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 626
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L RVV IS+ +S
Sbjct: 627 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEEL--ATTRVVDISIGDS----- 670
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 671 HCLALSHDNEVYAWGNNSMGQCG 693
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 167/346 (48%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGS 4075
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G++++F G+ RLG N P + LE V Q+A G + LA++ G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPE-RVSALEGHQVGQVACGLNHTLAVSA--DG 4190
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGNVYTF 4248
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V AL V VA G T +S GDVY++G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQL 4308
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P L+++L+ N + + +S W A
Sbjct: 4309 GLG---------HTNHVREPTLISALQGKNIQQISAGRCHSAAWTA 4345
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 24/350 (6%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 203
++Q I AG + ++S G V + G S G+LG G + + + + I+ + ++
Sbjct: 399 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 458
Query: 204 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNF 261
G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 459 KGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 516
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL+
Sbjct: 517 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 572
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
G V+S G G GKLGHG P+++E Q + ++ V AG+ + + G+
Sbjct: 573 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 629
Query: 382 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 630 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWG-- 685
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V L V + + ++S+ W A
Sbjct: 686 -NNSMGQC----GQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 730
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G ++SFG+ G+LG G T + P + +L+G ++
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQV 4173
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4174 GQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4231
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V L + + +A
Sbjct: 4232 GTQFSVALTKDGNVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALTGVFIEDVAV 4283
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + L L+ S VY+ G G+LG G + P LI Q N+Q ++AG
Sbjct: 4284 GAEHTLTLS---STGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQ--ISAGRC 4338
Query: 372 HAA 374
H+A
Sbjct: 4339 HSA 4341
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQMVTSC 4073
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S ++S G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4132 --AVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALE--GHQVGQVACGLNHTLAVS 4187
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG+VY+
Sbjct: 4188 ADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYT 4247
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ V +L V V + HT L+
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQVPALTGVFIEDVAVG-------AEHTLTLS 4292
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVRE 4318
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWG 386
V + G G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4033 VSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWG 4092
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG ++SFG G+ L
Sbjct: 4093 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRL- 4151
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYAFG 505
G GN +N P+ V++L+ +V Q++ + HT A++ G ++AFG
Sbjct: 4152 ------GLGNT-SNKKLPERVSALE--GHQVGQVACGLN-----HTLAVSADGMTVWAFG 4197
Query: 506 AGDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4198 DGDYGKLGL---GNSTAKSSPQKVDV 4220
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 564 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 623
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L VV +IG+ LS
Sbjct: 624 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 677
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P ++G L+ + + QI+AG + LA P
Sbjct: 678 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG-LDGVAIQQISAGTSHSLAWTALPR 733
Query: 325 GMAV 328
V
Sbjct: 734 DRQV 737
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 176/371 (47%), Gaps = 48/371 (12%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
VY++G + GQLG ++ P+ + L II+ A +M +S G+VY +GK+
Sbjct: 44 TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKN 103
Query: 225 SFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
G Y + ++ P+LVE L+NI + Q + G F A +S++G +YT WGN
Sbjct: 104 KGGILGHYDITSFNMI-QPELVEKLENIQIKQISCGPFHMAAISQDGELYT--WGNKDHG 160
Query: 282 RLGHHTE--PNDVEPH---------------PLLGTLENIPVVQIAAGYCYLLALACQPS 324
+LGH + N VE + +L I Q++ G + + L
Sbjct: 161 KLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT---E 217
Query: 325 GMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VYS G + G+LG+ S T P+ I Q + + + G +A V G+V
Sbjct: 218 NGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNI----INIDCGQQFSAAVSSSGKVY 273
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG +G LG+ ++ P V K I+++ GD +S +G ++++G G
Sbjct: 274 TWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDG 333
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH+ NR+ ++ P+ + + E+++++ + HT LT++ +LY
Sbjct: 334 QLGHS-------NRN-DLYAPKQI----EFKEKIIKVDCGGT-----HTAFLTQNNQLYL 376
Query: 504 FGAGDKGQLGI 514
FG G++GQLGI
Sbjct: 377 FGRGNEGQLGI 387
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------------------PRP 190
Q GP H A++ G +Y++G+ G+LGH ++ + P
Sbjct: 134 QISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTK 193
Query: 191 IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 250
++SL GI+ Q + G T+++++ G+VY+FG G+ Y + T P+ + L+N
Sbjct: 194 VQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNF-QPKKIPDLQN 252
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
I + G F+A +S G+VYT WGN+ +LG++ P+ + G N ++
Sbjct: 253 IINIDC--GQQFSAAVSSSGKVYT--WGNNDHGQLGNNQSIYQARPNQVTGFGGN-KIIN 307
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
I+ G ++ AL+ + +++ G G G+LGH +R D P+ IE + + V
Sbjct: 308 ISCGDNFIAALSNEGK---LFTWGYGNDGQLGHSNRNDLYAPKQIE----FKEKIIKVDC 360
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECE----SVPKVVQALNDVKAIHVATGDY 423
G H A + Q+ ++ +G G G LG G N E E + PK+V+ +K + V G
Sbjct: 361 GGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGE 420
Query: 424 TTFVVSE 430
T ++E
Sbjct: 421 YTLAITE 427
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 166/382 (43%), Gaps = 49/382 (12%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGI 197
E R + A S+A++ G VY++G N G LGH T+ +P + L+ I
Sbjct: 71 EKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENI 130
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-------------------GTKL 238
+I Q + G IS G++Y +G G+ + +Q G+ L
Sbjct: 131 QIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSML 190
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
P V+SL I Q + G FT VL+ G VY+F +LG+ +E +
Sbjct: 191 ---PTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKI 247
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-- 356
L+NI + I G + A++ S VY+ G G+LG+ + P + F
Sbjct: 248 PDLQNI--INIDCGQQFSAAVS---SSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGG 302
Query: 357 -QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+++N ++ G A + +G++ TWG+G G LGH N PK ++ K
Sbjct: 303 NKIIN-----ISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEF--KEKI 355
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
I V G T ++++ +Y FG G LG I + + A TP++V K++
Sbjct: 356 IKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG---IGENIESEAAIRTTPKIVEFFKKM-- 410
Query: 476 RVVQISLTNSIYWNAHTFALTE 497
+VV ++ +T A+TE
Sbjct: 411 KVVDVTCGGE-----YTLAITE 427
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+ +G+ P VY+ G G G+LG + ++ P+ +E+ N+ + V A
Sbjct: 26 VTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNI--IKVKA 83
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTF 426
+ + QDG+V TWG + G LGH + ++ P++V+ L +++ ++ G +
Sbjct: 84 NKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMA 143
Query: 427 VVSEDGDVYSFGCGESASLGH------NAIADGQGNRHANV----LTPQLVTSLKQVNER 476
+S+DG++Y++G + LGH N + +GN++ + + P V SL + +
Sbjct: 144 AISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGI--K 201
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
Q+S T LTE+G++Y+FG KGQLG +
Sbjct: 202 CKQVSCGGQF-----TVVLTENGEVYSFGNSMKGQLGYQ 235
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG+G +G LG NE + P+ V+ L+D I V + +S+DG VY++G +
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH I N++ P+LV L+ + ++ QIS H A+++ G+L
Sbjct: 105 GGILGHYDITS------FNMIQPELVEKLENI--QIKQISCG-----PFHMAAISQDGEL 151
Query: 502 YAFGAGDKGQLG--IELVNNQTE--RGN 525
Y +G D G+LG I+ +N+ E RGN
Sbjct: 152 YTWGNKDHGKLGHEIQQKSNKVEIKRGN 179
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 173/352 (49%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G ++ +G N GQLG + +P +L R IQ G ++ G+V+A G
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ GV GT+ V+ P +ES++++F+ + A+ G LS EG VY++ G D
Sbjct: 4521 GA--GGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDG 4578
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P ++ +L VV IAAG + AC + +Y+ G G G+LGH
Sbjct: 4579 KLGHGNRSPCDRPR-VIDSLRGKEVVDIAAGGAHS---ACITANGELYTWGKGRYGRLGH 4634
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E + + + +G + D V +WG G YG LG G +
Sbjct: 4635 GDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4694
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP ++ L + V G + +++ G VY++G G+ LGH + +V
Sbjct: 4695 KVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGS--------DDHV 4746
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V++L+ N++V+ ++ + H A T++G+++++G D+GQLG
Sbjct: 4747 RRPRKVSALQ--NKKVIDVACG-----SLHCVACTDTGEVFSWGDNDEGQLG 4791
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 26/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P +L +R +Q G+ ++ G+VYA G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ T V+ P+ + SL + + A+ G + L+ +G+V+++ G+D +L
Sbjct: 3526 NGRLGLGIT-TGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + N +P L+ L++ V IA G + A+ S +Y+ G G G+LGHG
Sbjct: 3585 GHFSRWNCDKPR-LIEALKSKRVRDIACGSSHSAAIT---SNGDLYTWGLGEYGRLGHGD 3640
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECE 401
T + P+ ++ L + + V VA G+ A + +G+V +WG G +G LG G E
Sbjct: 3641 NTTQLKPKQVK--ALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGC 3698
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+VP V L D K + G + +++ G V+++G G+ LGH A+V
Sbjct: 3699 NVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT--------DAHV 3750
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
PQ+V LK +++V +++ H A+T+SG+++A+G D GQ G
Sbjct: 3751 RKPQIVEGLK--GKKIVHVAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG 3795
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 175/358 (48%), Gaps = 24/358 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G AVT++G V++ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 4498 QLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGG 4557
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P++++SL+ VV A G +A +
Sbjct: 4558 KHCLALSAEGEVYSWGEGEDGKLGHGNRSP--CDRPRVIDSLRGKEVVDIAAGGAHSACI 4615
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ G +YT+ G RLGH + +P P L+ L++ VV +A G L C
Sbjct: 4616 TANGELYTWGKGRYGRLGHGDSED--QPRPKLVEALKSYRVVDMACGSGDAQTL-CITDD 4672
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+S G G GKLG G K P IE Q + + V G+ + + + G V TW
Sbjct: 4673 DNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGV--MKVECGSQFSVALTKSGSVYTW 4730
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G Y LGHG+++ P+ V AL + K I VA G ++ G+V+S+G + L
Sbjct: 4731 GKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQL 4790
Query: 446 GHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKL 501
G DG N + P+LV SL K++N V +S+ W+ T +GKL
Sbjct: 4791 G-----DGTTN---AIQRPRLVASLLGKKINR--VACGSAHSLAWS--TNKAVSAGKL 4836
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 9/302 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQG--IRIIQAAAG 205
Q + G VT +G VY+ G ++G+LG G TT PR I SL I+ + +G
Sbjct: 3501 QIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSG 3560
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ ++ G+V+++G+ G+ + + P+L+E+LK+ V A G+ +A
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN--CDKPRLIEALKSKRVRDIACGSSHSAA 3618
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ G +YT+ G RLGH ++P + L + VVQ+A G LA G
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQV-KALAHERVVQVACGSRDAQTLALTDEG 3677
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
VYS G G GKLG G P +++ L + + + GA + + + G+V TW
Sbjct: 3678 -KVYSWGDGDFGKLGRGGSEGCNVPHEVDR--LRDQKVCQIECGAQFSLALTKSGQVWTW 3734
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G Y LGHG + P++V+ L K +HVA G V++ G V+++G +
Sbjct: 3735 GKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQ 3794
Query: 446 GH 447
G+
Sbjct: 3795 GN 3796
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 129/257 (50%), Gaps = 19/257 (7%)
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L+ +G V+++ G+ +LGH N EP + G L V +I G Y +AL S
Sbjct: 634 LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSSYSVALT---SN 689
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
VYS G G G+LGHGS D+ P L++ F+ + V +G V G V +W
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSW 749
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G YG LG G + PKV++ L + V G+ + +++ G VY++G G++ L
Sbjct: 750 GDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRL 809
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH HA P+ + +L +++V I++ + H A+TE G+LY +G
Sbjct: 810 GHGT------EDHAR--HPKQIEALS--SKKVKDIAIG-----SLHCMAITEDGELYGWG 854
Query: 506 AGDKGQLGIELVNNQTE 522
++GQLG ++N TE
Sbjct: 855 RNEQGQLGNPSISNFTE 871
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
++ ++ G +S+A+TS G VYS+G + G+LGHG++E++ P ++ +G RI+ A
Sbjct: 671 KQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVAC 730
Query: 205 GAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
G+G +T+ ++D+G VY++G +G + G G +P+++E L VV+ GN F
Sbjct: 731 GSGDAQTLAVTDSGAVYSWGDGDYG--KLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQF 788
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ L++ G VYT+ G++ RLGH TE + P + L + V IA G + +A+
Sbjct: 789 SMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQ-IEALSSKKVKDIAIGSLHCMAIT-- 845
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
+Y G G+LG+ S ++ P LI
Sbjct: 846 -EDGELYGWGRNEQGQLGNPSISNFTEPTLI 875
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 135/272 (49%), Gaps = 11/272 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+T+ G V+S+G G+LGH + +PR I +L+ R+ A G+ +
Sbjct: 3559 SGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAA 3618
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ G +Y +G +G +G T+L P+ V++L + VVQ A G + T L+ E
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQL--KPKQVKALAHERVVQVACGSRDAQTLALTDE 3676
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+VY++ G+ +LG PH + L + V QI G + LAL SG V+
Sbjct: 3677 GKVYSWGDGDFGKLGRGGSEGCNVPHE-VDRLRDQKVCQIECGAQFSLALT--KSGQ-VW 3732
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P+++E + + V VA GA H V G+V WG
Sbjct: 3733 TWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKI--VHVAVGALHCLAVTDSGQVFAWGDND 3790
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G+G P +V L K VA G
Sbjct: 3791 HGQQGNGTTTVNRKPALV-VLEGYKISKVACG 3821
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 137/279 (49%), Gaps = 10/279 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H + +TS G V+S+G+ G+LGHG + P I L G ++ + G+ ++ ++
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G+VY++GK +FG +G ++ T+P L++ K +V A G+ T ++ G VY
Sbjct: 690 GEVYSWGKGNFGRLGHG--SSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LG P ++ L VV++ G + +AL SG AVY+ G
Sbjct: 748 SWGDGDYGKLGRGGNDGCKTPK-VIEKLMGQDVVRVYCGNQFSMALT--KSG-AVYTWGK 803
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHG+ +HP+ IE ++ +A G+ H + +DG + WG G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSKKVKD--IAIGSLHCMAITEDGELYGWGRNEQGQL 861
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
G+ + + P ++ + I VA G TF + G
Sbjct: 862 GNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H + DG V +WG G G LGHG+ + P ++ L+ + + G + ++ +
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G+VYS+G G LGH + D TP L+ K R+V ++ + +A
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQT--------TPMLLKFFK--GHRIVDVACGSG---DAQ 736
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T A+T+SG +Y++G GD G+LG
Sbjct: 737 TLAVTDSGAVYSWGDGDYGKLG 758
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHGT +P+ + L+G +I+ A GA
Sbjct: 3714 QIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALH 3773
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
+ ++D+GQV+A+G + G+ G T + P LV
Sbjct: 3774 CLAVTDSGQVFAWGDNDHGQQGNGT--TTVNRKPALV 3808
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G H +A+T G +Y +G N GQLG+ + P I ++G I
Sbjct: 824 EALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNI 883
Query: 200 IQAAAGAGRTMLISDAGQ 217
I A G +T + GQ
Sbjct: 884 IGVACGPTQTFAWTSGGQ 901
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 197/435 (45%), Gaps = 34/435 (7%)
Query: 88 APDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--R 145
+P+ +S ++ M +R++ ++ ++ + G L L E CR
Sbjct: 289 SPEGMISFDCFMSILMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMAS 348
Query: 146 ENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
+ S+ A P G + V+ VY +GSNSS QL GT E+ +P+ S + I
Sbjct: 349 DYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTI 408
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
+A G T +IS G V A GK S+G G + E ++I V ++ G
Sbjct: 409 EA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ T + EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+Y+ G G G+LGHG P L++ + V+ G+ H + +D
Sbjct: 527 T---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKD 579
Query: 380 GR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY++G
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
CG G G+ A L P+L+ L R+V IS+ +S H AL+
Sbjct: 640 CGACL---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHD 683
Query: 499 GKLYAFGAGDKGQLG 513
++YA+G GQ G
Sbjct: 684 NEVYAWGNNSMGQCG 698
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 179/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V+ + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + +A++ G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST--DG 4204
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKK--VACGTQFSVALTKDGHVYTF 4262
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L+ V +A G T +S GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P L+T L+ N R + +S W A
Sbjct: 4323 GLG---------HTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 4359
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4245
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V L + + IA
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDIAV 4297
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LAL+ S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4298 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4352
Query: 372 HAA 374
H+A
Sbjct: 4353 HSA 4355
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 30/361 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY +G+ GQL P+ + + Q G T +I G V A G+ S
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVM---VPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4054
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDAR 282
+G G V + ++ +L+ V Q + + L+ G V+++ G+ +
Sbjct: 4055 YGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH P + L+ VVQ++ G+ + A + +++ G G G+LG G
Sbjct: 4113 LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLG 4168
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECE 401
+ +++K P + + Q VA G H V DG V +G G YG LG GN +
Sbjct: 4169 NTSNKKLPERVTALE--GYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK 4226
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S P+ V L + VA G + +++DG VY+F G+ +G + +G+ H
Sbjct: 4227 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIG---LPEGRARNHNR- 4280
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
PQ V L V + + HT AL+ +G +YA+G+ +GQLG+ N+
Sbjct: 4281 --PQQVPVLSGVFIEDIAVG-------AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVR 4331
Query: 522 E 522
E
Sbjct: 4332 E 4332
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4165
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGD 4212
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VDI
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDI 4234
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVSIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 23 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 82
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 83 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 140
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 196
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 254
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 309
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 310 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 359
Query: 511 QLGI 514
QLGI
Sbjct: 360 QLGI 363
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 17 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 74
Query: 258 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 75 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 133
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 134 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 188
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 248
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 249 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 293
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 294 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 323
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 184
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 185 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 242
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 243 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 298
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 299 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 355
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 356 GTNGQLGIGESVDRNFPKIIEALS 379
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+I+V+ G +Y++G + GQLGHG E+ P + +L I Q + G
Sbjct: 228 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 287
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
TM ++ G++Y +G + FG+ GV SP V + VVQ + G T ++
Sbjct: 288 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 345
Query: 268 REGRVYTFSWGNDARLG 284
V+ + G + +LG
Sbjct: 346 ERNNVFAWGRGTNGQLG 362
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 272 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 331
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 332 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 378
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 27/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
++ +G N GQLG P P +L +R IQ A G ++ G++YA G +
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4150
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
GV GT VT+P LVESL+++ + + A+ G LS +G V+++ G D +L
Sbjct: 4151 --GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4208
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + P L+ +L I VV IA G + + Q V + G G G+LGHG
Sbjct: 4209 GHGNRDSYDRPK-LIESLSGIGVVDIACGSAHSACITIQGH---VLTWGKGRYGRLGHGD 4264
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECE 401
D+ P+L+E LL + + +A G+ A + D V +WG G YG LG G +
Sbjct: 4265 SEDQLQPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4322
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP +++L + V G + ++ G VY++G G+ LGH GN +V
Sbjct: 4323 KVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HV 4374
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++++ I+ T S+ H A +++G+++ +G D+GQLG
Sbjct: 4375 RRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAGEVFTWGDNDEGQLG 4419
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 173/358 (48%), Gaps = 29/358 (8%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
V+SK +V+ G N QLG + P L ++ I A G+ ++S G++Y
Sbjct: 3026 VSSKVLVW--GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSW 277
A G+ + G G+ V +P+ V L V + A+ G L+ +G+V+++
Sbjct: 3084 ACGEGTNGR--LGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3141
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
G D +LGH +E L+ TL + IA G + A+ S +Y+ G G G
Sbjct: 3142 GEDGKLGHGNRLT-LEKPKLIETLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYG 3197
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGH 395
+LGHG + P+L+ Q + + V VA G+ A + +DG V +WG G +G LG
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQ--DHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGR 3255
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G E S+P V LN V + + G + +++ G+V+++G G+ LGH
Sbjct: 3256 GGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGT------ 3309
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++H TP + L+ ++V+ +++ H A+T+SG++YA+G D GQ G
Sbjct: 3310 DQHVRKPTP--IQGLR--GKKVIHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 3358
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 170/349 (48%), Gaps = 24/349 (6%)
Query: 151 IAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-- 207
IAG ++ AVT G +Y+ G + G+LG G T+ P + SLQ + I + A +G
Sbjct: 4127 IAGGEQTLYAVTPDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGK 4186
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S G+V+++G+ G+ +G + + P+L+ESL I VV A G+ +A ++
Sbjct: 4187 HCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACIT 4244
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G V T+ G RLGH + ++P L+ L + IA G L C
Sbjct: 4245 IQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDN 4302
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G K P IE L L V G+ + + + G V TWG
Sbjct: 4303 VWSWGDGDYGKLGRGGSDGCKVPMKIES--LAGLGVTKVECGSQFSVALTRSGSVYTWGK 4360
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN + PK V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4361 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGD 4420
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
++ Q P+LV SL+ + +V++ I +AHT AL+
Sbjct: 4421 GTVSAIQ--------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4454
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 12/273 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +P+ I +L+ RI A G+ +
Sbjct: 3122 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAA 3181
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y +G +G +G T+L P+LV +L++ VVQ A G + T L+ +
Sbjct: 3182 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALQDHRVVQVACGSRDAQTLCLTED 3239
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ G+ +LG PH + L + V+QI G + LAL V+
Sbjct: 3240 GLVFSWGDGDFGKLGRGGSEGCSIPHQ-VDRLNGVGVMQIECGAQFSLALT---KAGEVW 3295
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3296 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN 3352
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G GN P +V L+ + VA G
Sbjct: 3353 DHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
A R+ + G +S A+T+ G +Y++G + G+LGHG +E+++ P + +L+ R++
Sbjct: 657 ALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVV 716
Query: 201 QAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
A G G ++ +++AG +A+G FG + G + + P V+ + VV+
Sbjct: 717 HVALGCGDAHSLCVTEAGLAFAWGDGDFG--KLGNESCVGTSVPVQVDLPQASCVVKVFS 774
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+ F+ L+REG VYT+ G+ RLGH + P ++ LE +V +A G + LA
Sbjct: 775 GSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPK-MVQALEGKKIVDLAVGLAHCLA 833
Query: 319 L 319
L
Sbjct: 834 L 834
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 28/214 (13%)
Query: 306 VVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+VQ+AA +C ++LALA S VYS G G GG+LGHG + ++ P I L + Q
Sbjct: 609 IVQLAA-HCEGRHVLALA---SSGDVYSWGSGDGGRLGHGDTSAKELPTRIA--ALADRQ 662
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT-- 420
V G+ ++A + G + TWG G YG LGHGN E + VP +V AL + +HVA
Sbjct: 663 VTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GD + V+E G +++G G+ LG+ + V + V + Q
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGNESC----------------VGTSVPVQVDLPQA 766
Query: 481 SLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 513
S ++ + + ALT G +Y +G G G+LG
Sbjct: 767 SCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLG 800
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 23/255 (9%)
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L+ G VY++ G+ RLGH D L + + Q+ +C A +
Sbjct: 624 LASSGDVYSWGSGDGGRLGH----GDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+Y+ G G G+LGHG+ D+ P L+ + + V + G H+ V + G W
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739
Query: 386 GWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
G G +G L GNE C SVP V + V +G + ++ +G VY++G G
Sbjct: 740 GDGDFGKL--GNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGG 797
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH + H+ V P++V +L+ +++V +++ AH ALT SG+LY
Sbjct: 798 RLGHG------NSEHSPV--PKMVQALE--GKKIVDLAVG-----LAHCLALTASGELYG 842
Query: 504 FGAGDKGQLGIELVN 518
+G D Q+ E V
Sbjct: 843 WGRNDFQQICPECVT 857
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 20/240 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+ S G VYS+GS G+LGHG T + P I +L ++ G+ + I+ +
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G++Y +G+ ++G +G K V P LV +LK VV A+ G+ + ++ G +
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYV--PTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVY 329
+ G+ +LG+ + P + ++P VV++ +G + +AL + + VY
Sbjct: 738 AWGDGDFGKLGNESCVGTSVPVQV-----DLPQASCVVKVFSGSQFSVALTREGT---VY 789
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G GG+LGHG+ P++++ + + V +A G H + G + +GWGR
Sbjct: 790 TWGKGHGGRLGHGNSEHSPVPKMVQALE--GKKIVDLAVGLAHCLALTASGEL--YGWGR 845
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
S T++ +P ++ + +Q G H + G V +WG G G LGHG+ +
Sbjct: 592 SMTEDNYPAQVKGLECTIVQLAAHCEGR-HVLALASSGDVYSWGSGDGGRLGHGDTSAKE 650
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+P + AL D + V G + ++ G++Y++G G LGH D
Sbjct: 651 LPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDK--------Y 702
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P LVT+LK RVV ++L +AH+ +TE+G +A+G GD G+LG N++
Sbjct: 703 VPTLVTALKA--HRVVHVALGCG---DAHSLCVTEAGLAFAWGDGDFGKLG-----NESC 752
Query: 523 RGNPERVDIDL 533
G V +DL
Sbjct: 753 VGTSVPVQVDL 763
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA
Sbjct: 3277 QIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3336
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D+GQVYA+G + G+ G T + P LV L IFV + A G+
Sbjct: 3337 CLAVTDSGQVYAWGDNDHGQQ--GSGNTIVNKKPSLVLGLDGIFVNRVACGS 3386
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ +G S+A+T +G VY++G G+LGHG +E P+ +++L+G +I+ A G
Sbjct: 771 KVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAH 830
Query: 209 TMLISDAGQVYAFGKDSF 226
+ ++ +G++Y +G++ F
Sbjct: 831 CLALTASGELYGWGRNDF 848
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +AVT G VY++G N GQ G G T +P + L GI + + A G+ ++
Sbjct: 3333 GALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3392
Query: 213 S--------DAGQ--VYAFGKDSFGEAEYGV 233
S D + +A KD G G+
Sbjct: 3393 SLPQNQTEKDKKEPVPFAVAKDPLGSHSLGI 3423
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 173/382 (45%), Gaps = 31/382 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ V+ S+G GQLGHG E+ P I RI GA T
Sbjct: 28 AGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTA 87
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S + QVY++G FG +G + V +PQ V +L+ I + Q A G+ ++ G
Sbjct: 88 YSEEEQQVYSWGWGDFGRLGHG--NSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGG 145
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + E I V IAAG + A+ +Y
Sbjct: 146 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFEGICVKMIAAGAEHTAAVTEDGD---LYG 201
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGR 389
G G G LG G R D P E+ L+ + +V+ A W H V G + T+GW +
Sbjct: 202 WGWGRYGNLGLGDRNDRFVP---EKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LGHG+ E P V+AL D ++ G T ++ DG +Y +G + +G
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
D H + V + ++V Q++ W HT A TE ++A+G G
Sbjct: 319 SVD-----HCSP-----VQVMFPAEQKVAQVACG----WR-HTLAYTEKKNVFAWGRGTS 363
Query: 510 GQLGI-ELVNNQTERGNPERVD 530
GQLG E+V +R P +D
Sbjct: 364 GQLGHGEIV----DRNKPLMID 381
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 14/366 (3%)
Query: 148 SQAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+ A + + VYS+G G+LGHG + + + P+P+R+LQGI+I Q A G
Sbjct: 76 TSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGD 135
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+V ++G++ G+ G L+ PQ +++ + I V A G TA +
Sbjct: 136 SHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFEGICVKMIAAGAEHTAAV 193
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + P + +E +V IA G+ + + ++ SG+
Sbjct: 194 TEDGDLYGWGWGRYGNLGLGDRNDRFVPEK-VSLVEGEKMVLIACGWRHTITVSS--SGI 250
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 251 -LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 306
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GW ++G +G G+ P V + K VA G T +E +V+++G G S L
Sbjct: 307 GWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQL 366
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN-AHTFALTESGKLYAF 504
GH I D + ++P S K E + T ++ + + +AL K+
Sbjct: 367 GHGEIVDRNKPLMIDAISPDGSGSKKL--ESSTAVPFTAKVWVSPSERYALVPDEKVAKP 424
Query: 505 GAGDKG 510
G G G
Sbjct: 425 GVGTAG 430
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 24/316 (7%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + + + ++G+ G+ +G +LV P ++ +
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV--PTVISGFDAPRITSVIC 80
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G + TA E +VY++ WG+ RLGH + P P+ L+ I + Q+A G + L
Sbjct: 81 GADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVR-ALQGIKIKQMACGDSHCL 139
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A+ G V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V
Sbjct: 140 AVTM---GGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVK--MIAAGAEHTAAVT 194
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG + WGWGRYG LG G+ VP+ V + K + +A G T VS G +Y++
Sbjct: 195 EDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH D L P V +LK + QIS W HT ALT
Sbjct: 255 GWSKYGQLGHGDFEDH--------LFPHKVEALK--DSSTSQISGG----WR-HTMALTS 299
Query: 498 SGKLYAFGAGDKGQLG 513
GKLY +G GQ+G
Sbjct: 300 DGKLYGWGWNKFGQVG 315
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 22/226 (9%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
VV ++AG + +AL G + S G G G+LGHG D P +I F + V+
Sbjct: 23 VVLVSAGASHSVALL---EGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVI 79
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
A A ++ +V +WGWG +G LGHGN P+ V+AL +K +A GD
Sbjct: 80 CGADH-TTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHC 138
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
V+ G+V S+G ++ LG D L PQ + + + + +++
Sbjct: 139 LAVTMGGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFEGICVKMIAAGAE-- 188
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
HT A+TE G LY +G G G LG+ ++ +R PE+V +
Sbjct: 189 -----HTAAVTEDGDLYGWGWGRYGNLGL---GDRNDRFVPEKVSL 226
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 11 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 70
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 71 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 128
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 184
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 242
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 243 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 297
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 298 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 347
Query: 511 QLGI 514
QLGI
Sbjct: 348 QLGI 351
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 5 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62
Query: 258 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 237 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 281
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 282 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 311
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 230
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 231 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 286
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 287 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 343
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEALS 367
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+I+V+ G +Y++G + GQLGHG E+ P + +L I Q + G
Sbjct: 216 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 275
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
TM ++ G++Y +G + FG+ GV SP V + VVQ + G T ++
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 333
Query: 268 REGRVYTFSWGNDARLG 284
V+ + G + +LG
Sbjct: 334 ERNNVFAWGRGTNGQLG 350
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 260 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 320 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 366
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358
Query: 511 QLGI 514
QLGI
Sbjct: 359 QLGI 362
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73
Query: 258 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 187
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 248 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 292
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 11 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 70
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 71 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 128
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 184
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G RTD P + + +VA G H V G + T+GW +Y
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 242
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 243 GQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQV----- 297
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 298 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 347
Query: 511 QLGI 514
QLGI
Sbjct: 348 QLGI 351
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 158/333 (47%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 5 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62
Query: 258 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH + D L P + +L N + QIS HT ALT
Sbjct: 237 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGGFR-----HTMALT 281
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 282 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 311
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 230
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 231 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGFRHTMALT---SDGKL 286
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 287 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 343
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEALS 367
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+I+V+ G +Y++G + GQLGHG E+ P + +L I Q + G
Sbjct: 216 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFR 275
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
TM ++ G++Y +G + FG+ GV SP V + VVQ + G T ++
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 333
Query: 268 REGRVYTFSWGNDARLG 284
V+ + G + +LG
Sbjct: 334 ERNNVFAWGRGTNGQLG 350
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 260 EALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 320 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 366
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 171/361 (47%), Gaps = 27/361 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G T +IS
Sbjct: 370 GETPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQTIEA--GQYCTFVISS 427
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 273
G V A GK S+G G + E + I V ++ G + T + EG V+
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LGH P + G L+ VV ++AGY + A++ +Y+ G
Sbjct: 488 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS---EDGELYTWGE 544
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 392
G G+LGHG P L++ + V+ G+ H + +DGR V ++G G G
Sbjct: 545 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 600
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGHG+ PKVV+AL + V G ++ ++ G VY++GCG A LG
Sbjct: 601 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC----- 653
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G+ A L P+L+ L RVV IS+ +S H AL+ ++YA+G GQ
Sbjct: 654 --GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEVYAWGNNSMGQC 704
Query: 513 G 513
G
Sbjct: 705 G 705
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q + G + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4165
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4166 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4223
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE V Q+A G + L ++ G
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSAD--G 4280
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG+V T+
Sbjct: 4281 MMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACGTQFSVALTKDGKVFTF 4338
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L+ + VA G T V+S GDVY++G L
Sbjct: 4339 GQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQL 4398
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT+L+ N + +S W A
Sbjct: 4399 GLG---------HTNHVREPTLVTTLQGKNIHQISAGRCHSAAWTA 4435
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 24/350 (6%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 203
++Q I AG + ++S G V + G S G+LG G + + + + I+ + ++
Sbjct: 411 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 470
Query: 204 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNF 261
G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 471 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 528
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL+
Sbjct: 529 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 584
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
G V+S G G GKLGHG P+++E Q + ++ V AG+ + + G+
Sbjct: 585 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 641
Query: 382 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 642 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWG-- 697
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V L V + + ++S+ W A
Sbjct: 698 -NNSMGQC----GQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 742
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +
Sbjct: 4204 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHV 4263
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+++S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4264 GQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4321
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G+V+TF G D +G +H P V L I + +A
Sbjct: 4322 GTQFSVALTKDGKVFTF--GQDRLIGLPEGRARNHNRPQQVP------GLSGIHIQDVAV 4373
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + L L+ S VY+ G G+LG G + P L+ Q N+ ++AG
Sbjct: 4374 GAEHTLVLS---STGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQ--ISAGRC 4428
Query: 372 HAA 374
H+A
Sbjct: 4429 HSA 4431
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 29/239 (12%)
Query: 303 NIPVVQIAAGYCYLLALAC--------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
NI V IA + + C QP+G V + G G G+LG G+ D +I
Sbjct: 4091 NILVPTIAPSFSQAQQVVCGQNCTFVIQPNG-TVLACGEGSYGRLGQGNSDDLHVLTVIS 4149
Query: 355 QFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
Q + +V + G+ H+ + + G V +WG G YG LGHGN + + P+ ++AL
Sbjct: 4150 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4209
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+ + ++ G + VV+ DG +++FG G+ L G GN +N P+ VT+L+
Sbjct: 4210 EVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-------GLGNT-SNKKLPEKVTALEGY 4261
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+ V L HT ++ G + +AFG GD G+LG+ N T + +P++VD+
Sbjct: 4262 HVGQVACGLN-------HTLVVSADGMMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 4310
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4163
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4164 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4221
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A + +++ G G G+LG G+ +++K P + + ++ V A G H VV
Sbjct: 4222 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQV--ACGLNHTLVVS 4277
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG V++
Sbjct: 4278 ADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFT 4337
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
FG + +G + +G+ H PQ V L ++ + V + HT L+
Sbjct: 4338 FG--QDRLIG---LPEGRARNHNR---PQQVPGLSGIHIQDVAVG-------AEHTLVLS 4382
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +Y +G+ +GQLG+ N+ E
Sbjct: 4383 STGDVYTWGSNSEGQLGLGHTNHVRE 4408
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 576 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 635
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L VV +IG+ LS
Sbjct: 636 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 689
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P ++G L+ + + QI+AG + LA P
Sbjct: 690 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG-LDGVAIQQISAGTSHSLAWTALPR 745
Query: 325 GMAV 328
V
Sbjct: 746 DRQV 749
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 197/435 (45%), Gaps = 34/435 (7%)
Query: 88 APDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--R 145
+P+ +S ++ M +R++ ++ ++ + G L L E CR
Sbjct: 289 SPEGMISFDCFMSILMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMAS 348
Query: 146 ENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
+ S+ A P G + V+ VY +GSNSS QL GT E+ +P+ S + I
Sbjct: 349 DYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTI 408
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
+A G T +IS G V A GK S+G G + E ++I V ++ G
Sbjct: 409 EA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ T + EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 526
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+Y+ G G G+LGHG P L++ + V+ G+ H + +D
Sbjct: 527 T---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKD 579
Query: 380 GR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GR V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY++G
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
CG G G+ A L P+L+ L R+V IS+ +S H AL+
Sbjct: 640 CGACL---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHD 683
Query: 499 GKLYAFGAGDKGQLG 513
++YA+G GQ G
Sbjct: 684 NEVYAWGNNSMGQCG 698
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 179/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V+ + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3563
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3564 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3621
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + +A++ G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSM--DG 3678
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKK--VACGTQFSVALTKDGHVYTF 3736
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L+ V +A G T +S GDVY++G L
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 3796
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G G N +V P L+T L+ N R + +S W A
Sbjct: 3797 GL-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWTA 3833
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 3602 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3661
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 3662 GQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 3719
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V L + + IA
Sbjct: 3720 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDIAV 3771
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LAL+ S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 3772 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 3826
Query: 372 HAA 374
H+A
Sbjct: 3827 HSA 3829
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 30/361 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY +G+ GQL P+ + + Q G T +I G V A G+ S
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVM---VPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 3528
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDAR 282
+G G V + ++ +L+ V Q + + L+ G V+++ G+ +
Sbjct: 3529 YGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3586
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH P + L+ VVQ++ G+ + A + +++ G G G+LG G
Sbjct: 3587 LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLG 3642
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECE 401
+ +++K P + + Q VA G H V DG V +G G YG LG GN +
Sbjct: 3643 NTSNKKLPERVTALE--GYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK 3700
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S P+ V L + VA G + +++DG VY+F G+ +G + +G+ H
Sbjct: 3701 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIG---LPEGRARNHNR- 3754
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
PQ V L V + + HT AL+ +G +YA+G+ +GQLG+ N+
Sbjct: 3755 --PQQVPVLSGVFIEDIAVG-------AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVR 3805
Query: 522 E 522
E
Sbjct: 3806 E 3806
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 3522 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3581
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 3582 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 3639
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 3640 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSMDGSMVWAFGD 3686
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VDI
Sbjct: 3687 GDYGKLGL---GNSTAKSSPQKVDI 3708
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVSIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 173/359 (48%), Gaps = 24/359 (6%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3172 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 3231
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3232 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3289
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L I VV +AAG + AC + +Y+ G G
Sbjct: 3290 WGEAEDGKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKG 3345
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L++ Q + V +G + D V +WG G YG LG
Sbjct: 3346 RYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3405
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 3406 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS----- 3460
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G Y +G D+GQLG
Sbjct: 3461 ---DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGS-YTWGDNDEGQLG 3508
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 179/359 (49%), Gaps = 26/359 (7%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
A T + V+ +G N QLG + P +L + ++Q A G+ ++ G+V
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2238
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 276
YA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++
Sbjct: 2239 YACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 2297
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G
Sbjct: 2298 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 2353
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 394
G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG
Sbjct: 2354 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 2411
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 2412 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS----- 2466
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V PQ+V L+ +++V +++ H A+T++G++YA+G D GQ G
Sbjct: 2467 ---DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2515
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 171/357 (47%), Gaps = 19/357 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I + A +G
Sbjct: 3216 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3275
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A G +A +
Sbjct: 3276 KHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACV 3333
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L+ VV +A G L C
Sbjct: 3334 TAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVDALQGHRVVDVACGSGDAQTL-CLTDDD 3391
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P I+ L L V V G+ + + + G V TWG
Sbjct: 3392 TVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWG 3449
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG+++ P+ VQ L K I +ATG +EDG Y++G + LG
Sbjct: 3450 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLG 3508
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
DG N + P+LV +L+ V +++ W+ A +GKL A
Sbjct: 3509 -----DGTTN---AIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 3555
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2218 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2277
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2278 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2334
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2335 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2393
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2394 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2449
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2450 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2509
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 2510 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2550
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2427 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2481
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2482 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2539
Query: 257 AIGN 260
A G+
Sbjct: 2540 ACGS 2543
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 13/305 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HSI + G VY+ GSN+ GQLGH E +P I +L I+ A
Sbjct: 35 RSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 92
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +SD GQ++++G S G+ + V P+L++ L ++Q + GN+
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS-VAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 265 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ +G+ +T+ +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFPSQASPQR-VKSLEGIPLAQVAAGGAHSFALSL-- 208
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
SG AV+ G G+LG TD + P + +LL Q VV ++ G H AV+ + G V
Sbjct: 209 SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---KLLRTQKVVYISCGEEHTAVLTKSGGV 264
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 441
T+G G +G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 442 SASLG 446
LG
Sbjct: 325 RGQLG 329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+VT PQ + + + + A G + L +G VYT +LGH E N E
Sbjct: 22 IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQ--- 78
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + +V +A G + LAL+ Q ++S G G G+LGH + D PRLI++
Sbjct: 79 IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG R+G LG G E ++ P+ V++L +
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D Q H +L Q
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ--------- 243
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 244 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---NPRRV 289
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 92
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS +G+++++ G+D +LGH T + V L+ L ++Q++ G + +A
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ ++ + + L VAAG H+ +
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D + P+ V L + V QI+ HT A
Sbjct: 268 GAGSFGQLGHDSMNDE--------VNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVP 312
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 313 SSGLIYAFGCGARGQLG 329
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLGH TTE+ PR I+ L I+Q + G M
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++ G+ G + SPQ V+SL+ I + Q A G + LS G
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPS-QASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 266
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG + P ++ L+ +++ + G
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG SFG+ + ++ +P+ V L V Q A G T A +
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 311
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 312 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
W G G + + + P+ ++D VA G + + EDG+VY+ G
Sbjct: 7 WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQ 66
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH + +GN+ P+ + +L ++ +V ++ S H+ AL++ G+L+++
Sbjct: 67 LGH----EREGNK------PEQIGAL--ADQHIVHVACGES-----HSLALSDQGQLFSW 109
Query: 505 GAGDKGQLG 513
GAG GQLG
Sbjct: 110 GAGSDGQLG 118
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 178/363 (49%), Gaps = 37/363 (10%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E CC G HS +T G + +G GQLG G ++ PR + S++ +
Sbjct: 46 EVCC---------GGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSIK--NV 94
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQ 255
I + + I + G++Y +G + G+ G ++ +PQLVE L N V++
Sbjct: 95 INVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIK 154
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G+F TA L+ + YT+ G RLGH + NDV L+ +L + V I G +
Sbjct: 155 VSCGSFHTACLTDLNKAYTWGLGMQGRLGH-GDTNDVYTPKLIESLAGLSVKNIVCGGHH 213
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
L + VY G G GKLG GS+ D P+L+ Q L N V+ G H+AV
Sbjct: 214 TAILL---NNGKVYFCGGGAFGKLGFGSKEDIYIPKLL-QGSLTNKSIKEVSLGYQHSAV 269
Query: 376 VGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ G+V TWG G R G + +G E PK+V+ LN + A++++ G T V+S GDV
Sbjct: 270 ITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDV 329
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G + +LGH I D + N P L L+ N+ +VQ+S + HT A
Sbjct: 330 YAWGV--TRNLGHGVI-DSKPN------DPTLHPILQ--NKNIVQVSCGKT-----HTIA 373
Query: 495 LTE 497
L++
Sbjct: 374 LSD 376
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 175/351 (49%), Gaps = 30/351 (8%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTMLISDAGQVYAF 221
K V ++GS+ GQLG E P+ I SL RI + G + +I+ +G++ +
Sbjct: 7 KSGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVW 66
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
G G + G+ K + P+++ S+KN V+ + + +A + +GR+YT+
Sbjct: 67 GYGGCG--QLGLGDLKDIVIPRVMTSIKN--VINVSCSDRHSAAILEDGRLYTWGCNKSG 122
Query: 282 RLGHHTEPNDVEPH-----PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+LG + ++ + L+ L N V++++ G + AC Y+ G G+
Sbjct: 123 KLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFH---TACLTDLNKAYTWGLGMQ 179
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG D P+LIE L+++ +V G H A++ +G+V G G +G LG G
Sbjct: 180 GRLGHGDTNDVYTPKLIESLAGLSVKNIV--CGGHHTAILLNNGKVYFCGGGAFGKLGFG 237
Query: 397 NEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
++E +PK++Q +L + V+ G + V++ G VY++G G LGH I +G
Sbjct: 238 SKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGH--IYNGP- 292
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
++L+P+LV L + V IS +S HT ++ G +YA+G
Sbjct: 293 --EPDILSPKLVEKLNSI--IAVNISCGHS-----HTVVISNIGDVYAWGV 334
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 48/306 (15%)
Query: 225 SFGEAEYGVQGTKLVTS---PQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGND 280
++G +EYG G S P+L+ESL + + + G +AV++ G + + +G
Sbjct: 12 AWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGC 71
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGC 333
+LG LG L++I + ++ ++ ++C A +Y+ GC
Sbjct: 72 GQLG-------------LGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWGC 118
Query: 334 GLGGKLGHGSRTDEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
GKLG GS + P+L+E+ LLN + + V+ G++H A + + TWG
Sbjct: 119 NKSGKLGIGSLNVNLNNNIICTPQLVEK--LLNEKVIKVSCGSFHTACLTDLNKAYTWGL 176
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G G LGHG+ PK++++L + ++ G + T ++ +G VY G G LG
Sbjct: 177 GMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF 236
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ D + P+L+ N+ + ++SL H+ +T GK+Y +G G
Sbjct: 237 GSKED--------IYIPKLLQG-SLTNKSIKEVSLGYQ-----HSAVITTKGKVYTWGQG 282
Query: 508 DKGQLG 513
G+LG
Sbjct: 283 --GRLG 286
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 440
V WG YG LG EE PK++++L I V G + + V++ G++ +G G
Sbjct: 10 VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG + D ++ P+++TS+K V + +S ++ H+ A+ E G+
Sbjct: 70 GCGQLGLGDLKD--------IVIPRVMTSIKNV----INVSCSDR-----HSAAILEDGR 112
Query: 501 LYAFGAGDKGQLGI 514
LY +G G+LGI
Sbjct: 113 LYTWGCNKSGKLGI 126
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 37/376 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ ++GS GQLG G EE I++L+ + AG+ ++ I++ G+++ +G +
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + GTK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPA-GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 286 HTEPNDVEPHPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
E D P + IP V Q+AAG + + L + V++ G
Sbjct: 126 EPEKKDNTGRPPRRDIA-IPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQ 177
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G T P ++ ++ L +A GA+H + +DG + WG YG LG G+
Sbjct: 178 PWPPGDITQISVPVRVQGLDMVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 233
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ S P VQ L+ + + +A G + + ++++G+VY +G GE LG N
Sbjct: 234 TQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGD------ND 287
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
++ + PQ V L E +VQIS + H+ A+T G++++FG GD G+LG
Sbjct: 288 KSSKMVPQKVQLLS--GEEIVQISCGGT-----HSVAVTSDGRMFSFGRGDHGRLGY--- 337
Query: 518 NNQTERGNPERVDIDL 533
+ G PE V ID+
Sbjct: 338 GRKVTTGQPEEVPIDI 353
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 33/331 (9%)
Query: 129 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWR 187
W ++ L + C +AG +S+A+T G ++++G N G LGH T+ E
Sbjct: 28 WVCAIKALESQNVCS------VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENV 81
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 239
P +++L ++I+QAA G + + D G+ YA+G + +G+ G + +
Sbjct: 82 PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDI 141
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
PQ + V Q A G + VL+REG V+T+ G P D+ +
Sbjct: 142 AIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDITQISVPV 191
Query: 300 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
++ + +V+ IA G + LAL Q G +++ G G+LG G P ++
Sbjct: 192 RVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 416
L L V +AAG WH+ + +G V WG G +G LG G+ + S VP+ VQ L+ + +
Sbjct: 249 LTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++ G + V+ DG ++SFG G+ LG+
Sbjct: 307 QISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ G ++++G+N GQLG G T+ +P P++ L G+ ++ AAG + ++D
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDN 267
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VY +G+ G +G PQ V+ L +VQ + G + ++ +GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSF 327
Query: 276 SWGNDARLGHHTEPNDVEPH-------PLLGTLENIPVVQ--IAAGYCYLLAL 319
G+ RLG+ + +P P G EN + +A G + LAL
Sbjct: 328 GRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 44/231 (19%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+G A+ + G G G+LG G+ + + I+ + N+ VV AG+ ++ + +DG++
Sbjct: 3 AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60
Query: 384 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 438
TWGW + G LGH + E+VP V+AL++VK + A G + V + G Y++G
Sbjct: 61 TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 439 --CGESASLGHNA-------IADGQ-------------GNRHANVLT------------- 463
CGE N IA Q G H+ VLT
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
P +T + V RV + + I A H AL E G L+A+G + GQLG
Sbjct: 181 PGDITQIS-VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 209
AG HS A+T G VY +G G+LG G ++ + P+ ++ L G I+Q + G +
Sbjct: 256 AGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHS 315
Query: 210 MLISDAGQVYAFGKDSFGEAEYG 232
+ ++ G++++FG+ G YG
Sbjct: 316 VAVTSDGRMFSFGRGDHGRLGYG 338
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 176/375 (46%), Gaps = 35/375 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ ++GS GQLG G EE I++L+ + AG+ ++ I++ G+++ +G +
Sbjct: 7 IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + GTK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPA-GTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 286 HTEPNDVEPHPLLGTLE-------NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
E D P + + V Q+AAG + + L + V++ G
Sbjct: 126 EPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGH---VWT----WGQP 178
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G T P ++ ++ L +A GA+H + +DG + WG YG LG G+
Sbjct: 179 WPPGDITQISVPVRVQGLDMVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDT 234
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ S P VQ L+ + + +A G + + ++++G+VY +G GE LG N
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGD------NDK 288
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
++ + PQ V L E +VQIS + H+ A+T G++++FG GD G+LG
Sbjct: 289 SSKMVPQKVQLLS--GEEIVQISCGGT-----HSVAVTSDGRMFSFGRGDHGRLGY---G 338
Query: 519 NQTERGNPERVDIDL 533
+ G PE V ID+
Sbjct: 339 RKVTTGQPEEVPIDI 353
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 33/331 (9%)
Query: 129 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWR 187
W ++ L + C +AG +S+A+T G ++++G N G LGH T+ E
Sbjct: 28 WVCAIKALESQNVCS------VVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENV 81
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 239
P +++L ++I+QAA G + + D G+ YA+G + +G+ G + +
Sbjct: 82 PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDI 141
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
PQ + V Q A G + VL+REG V+T+ G P D+ +
Sbjct: 142 AIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDITQISVPV 191
Query: 300 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
++ + +V+ IA G + LAL Q G +++ G G+LG G P ++
Sbjct: 192 RVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 416
L L V +AAG WH+ + +G V WG G +G LG G+ + S VP+ VQ L+ + +
Sbjct: 249 LTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++ G + V+ DG ++SFG G+ LG+
Sbjct: 307 QISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ G ++++G+N GQLG G T+ +P P++ L G+ ++ AAG + ++D
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDN 267
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VY +G+ G +G PQ V+ L +VQ + G + ++ +GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSF 327
Query: 276 SWGNDARLGHHTEPNDVEPH-------PLLGTLENIPVVQ--IAAGYCYLLAL 319
G+ RLG+ + +P P G EN + +A G + LAL
Sbjct: 328 GRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 44/231 (19%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+G A+ + G G G+LG G+ + + I+ + N+ VV AG+ ++ + +DG++
Sbjct: 3 AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60
Query: 384 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 438
TWGW + G LGH + E+VP V+AL++VK + A G + V + G Y++G
Sbjct: 61 TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 439 --CGESASLGHNA-------IADGQ-------------GNRHANVLT------------- 463
CGE N IA Q G H+ VLT
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
P +T + V RV + + I A H AL E G L+A+G + GQLG
Sbjct: 181 PGDITQIS-VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 209
AG HS A+T G VY +G G+LG G ++ + P+ ++ L G I+Q + G +
Sbjct: 256 AGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHS 315
Query: 210 MLISDAGQVYAFGKDSFGEAEYG 232
+ ++ G++++FG+ G YG
Sbjct: 316 VAVTSDGRMFSFGRGDHGRLGYG 338
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 182/414 (43%), Gaps = 71/414 (17%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
I+ T +V+ FG NS G+LG G +E P +R + + Q AAG +++ G
Sbjct: 33 ISGTGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGD 92
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTF 275
V G + G+ +G K +++P+ +ESLKNI + + +A G A++S++G++YT
Sbjct: 93 VLTVGFNGSGQLGHG--NNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTC 150
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-----CQPSGMAVYS 330
+ N +LGH T+ N P L+ L++ V ++ Y + L + VYS
Sbjct: 151 GYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
VG G+LG E P++I LN + V+ A G H+ V G V + G+
Sbjct: 210 VGRNDNGQLGQEHTCHEITPKIIRS---LNTRQVIQTACGLHHSVFVTVHGEVFSCGFND 266
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--- 446
G LGH + + + P ++++L + + A G Y T V + G++Y+FG + LG
Sbjct: 267 NGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIET 326
Query: 447 --------------------------HNAIADGQGN---------------------RHA 459
N + GQ + +
Sbjct: 327 NGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNL 386
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N PQ+ K+VN + +SI AL ESG+L+ FG G+ GQLG
Sbjct: 387 NNQQPQVQYLSKKVNISKIACGCYHSI-------ALCESGQLFTFGRGNHGQLG 433
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 152/307 (49%), Gaps = 31/307 (10%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V+ FG++S+GE G+ + + P V + V Q A GN AVL+R G V T +
Sbjct: 41 VFVFGQNSYGE--LGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLG 336
+LGH + P + +L+NI + I+ A C LA+ Q + Y+ G
Sbjct: 99 NGSGQLGHGNNKSISTPKKI-ESLKNIRITHISSANGCENLAIISQDGKL--YTCGYNNY 155
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR--------VCTWGWG 388
G+LGHG++++ P L++ L + Q V+ +H+ +V QD R V + G
Sbjct: 156 GQLGHGTQSNLSTPTLVQA--LKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRN 213
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LG + E PK++++LN + I A G + + V+ G+V+S G ++ LGHN
Sbjct: 214 DNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHN 273
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
P L+ SLK N+ +VQ + Y+ HT ++G++YAFG D
Sbjct: 274 DTKSRN--------QPVLIESLK--NKFIVQAACG---YY--HTLVRRDTGEIYAFGRND 318
Query: 509 KGQLGIE 515
KGQLGIE
Sbjct: 319 KGQLGIE 325
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 8/279 (2%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
A + VYS G N +GQLG T E P+ IRSL ++IQ A G ++ ++ G+V
Sbjct: 200 ASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEV 259
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
++ G + G+ G TK P L+ESLKN F+VQAA G + T V G +Y F
Sbjct: 260 FSCGFNDNGQ--LGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRN 317
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA---CQPSGMAVYSVGCGL 335
+ +LG T + + + +Q + G L QPS ++ G +
Sbjct: 318 DKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIM 377
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G L + + + P++ + +N+ + A G +H+ + + G++ T+G G +G LG
Sbjct: 378 QG-LAESNNLNNQQPQVQYLSKKVNISKI--ACGCYHSIALCESGQLFTFGRGNHGQLGQ 434
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
GN E + +PK V +L+D K I +A G Y T V+ + V
Sbjct: 435 GNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 10/242 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R+ Q G HS+ VT G V+S G N +GQLGH T+ +P I SL+ I+QAA
Sbjct: 238 RQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAAC 297
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T++ D G++YAFG++ G+ G L+ Q+ E L + +Q + GN
Sbjct: 298 GYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFL-TVSNIQHSGGNQNQL 356
Query: 265 VLSRE-GRVYTFSWGND-ARLGHHTEPNDV-EPHPLLGTL-ENIPVVQIAAGYCYLLALA 320
+E + + S G A + E N++ P + L + + + +IA G CY
Sbjct: 357 HSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACG-CYHSIAL 415
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
C+ +++ G G G+LG G+ D+K P+ + L + + + +A G +H V+ +
Sbjct: 416 CESG--QLFTFGRGNHGQLGQGNTEDQKLPKQVA--SLHDKKVIGIAGGFYHTIVLVKQK 471
Query: 381 RV 382
+V
Sbjct: 472 KV 473
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 150/325 (46%), Gaps = 30/325 (9%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-DAGQ- 217
++ G +Y+ G N+ GQLGHGT P +++L+ ++ + +++++ D Q
Sbjct: 141 ISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQA 200
Query: 218 ------VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
VY+ G++ G+ G + T +P+++ SL V+Q A G + ++ G
Sbjct: 201 SNQQTTVYSVGRNDNGQ--LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGE 258
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V++ + ++ +LGH+ + +P L+ +L+N +VQ A GY + L + +Y+
Sbjct: 259 VFSCGFNDNGQLGHNDTKSRNQP-VLIESLKNKFIVQAACGYYHTLV---RRDTGEIYAF 314
Query: 332 GCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGR 389
G G+LG + P+ I++F L + + + G + GQ+ + + G
Sbjct: 315 GRNDKGQLGIETNGQALIQPKQIQEF--LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGE 372
Query: 390 YGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G + G E ++ P+V V +A G Y + + E G +++FG G L
Sbjct: 373 SGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQL 432
Query: 446 GHNAIADGQGNRHANVLTPQLVTSL 470
GQGN L P+ V SL
Sbjct: 433 -------GQGNTEDQKL-PKQVASL 449
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 27/361 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G + V+ VY +GSNSS QL GT E+ +P+ + I+A G T +IS
Sbjct: 363 GENPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEA--GQYCTFVIST 420
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 273
G V A GK S+G G + E ++I V ++ G + T + EG V+
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LGH P + GTL+ VV ++AGY + A+ +Y+ G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT---EDGELYTWGE 537
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 392
G G+LGHG P L++ + V+ G+ H + +DGR V ++G G G
Sbjct: 538 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGHG+ PKVV+AL + V G ++ ++ G VY++GCG A LG
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC----- 646
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G+ A L P+L+ L R+V IS+ +S H AL+ ++YA+G GQ
Sbjct: 647 --GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEVYAWGNNSMGQC 697
Query: 513 G 513
G
Sbjct: 698 G 698
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4071
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4072 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4129
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + + Q+A G + LA++ G
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSA--DG 4186
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4187 SLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4244
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P++V L + +A G T +S G+VY++G L
Sbjct: 4245 GQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQL 4304
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT+L+ N R + +S W A
Sbjct: 4305 GLG---------HTNHVREPTLVTALQGKNIRQISAGRCHSAAWTA 4341
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ +L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGTLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P+++E Q + + V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 38/310 (12%)
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+G ++S+ +VY +G +S + G Q + + P+L + ++A G + T V
Sbjct: 362 SGENPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPCFSDAQTIEA--GQYCTFV 417
Query: 266 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 318
+S +G V G+ RLG N EPH +++ + + + G+
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGTLQGKVVVCVSAGYRHSAAVTE 528
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 437
DG + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G++ LGH G NR V P++V +L+ + R V +S+ ALT
Sbjct: 587 GGGDNGKLGH-----GDTNR---VYKPKVVEALQGMFTRKVCAGSQSSL-------ALTS 631
Query: 498 SGKLYAFGAG 507
+G++YA+G G
Sbjct: 632 TGQVYAWGCG 641
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G+ I
Sbjct: 4110 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHI 4169
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4170 GQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4227
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P L+ L I + IA
Sbjct: 4228 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQ------LVPVLLGIFIDDIAV 4279
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---A 368
G + LAL+ SG VY+ G G+LG G + P L+ Q N++ + +
Sbjct: 4280 GAEHTLALSA--SG-EVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHS 4336
Query: 369 GAWHAAVV 376
AW AA V
Sbjct: 4337 AAWTAAPV 4344
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4069
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4070 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4127
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A + +++ G G G+LG G+ +++K P + + L++ V A G H V
Sbjct: 4128 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQV--ACGLNHTLAVS 4183
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4184 ADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4243
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQLV L + I + + HT AL+
Sbjct: 4244 F--GQDRLIG---LPEGRARNHNR---PQLVPVL-------LGIFIDDIAVGAEHTLALS 4288
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
SG++YA+G+ +GQLG+ N+ E
Sbjct: 4289 ASGEVYAWGSNSEGQLGLGHTNHVRE 4314
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4030 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4089
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4090 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4147
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ ++ V L HT A++ G L +AFG
Sbjct: 4148 -----GLGNT-SNKKLPERVTALEGLHIGQVACGLN-------HTLAVSADGSLVWAFGD 4194
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4195 GDYGKLGL---GNSTAKSSPQKVDV 4216
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 182/383 (47%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAS 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ ++N+ V + G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD--IINVGEV--SCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q + G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4093
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4094 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4151
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + +A++ G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVST--DG 4208
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4266
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L V +A G T +S GDVY++G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4327 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4363
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 177/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDIIN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4191
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4192 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4249
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V PLL + + IA
Sbjct: 4250 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PLLA---GVFIEDIAV 4301
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LAL+ S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4302 GAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4356
Query: 372 HAA 374
H+A
Sbjct: 4357 HSA 4359
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4091
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4149
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A + +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4150 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTVAVS 4205
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4206 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
FG + +G + +G+ H PQ V L V + + HT AL+
Sbjct: 4266 FG--QDRLIG---LPEGRARNHNR---PQQVPLLAGVFIEDIAVG-------AEHTLALS 4310
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4311 STGDVYAWGSNSEGQLGLGHTNHVRE 4336
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4169
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4170 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGD 4216
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VDI
Sbjct: 4217 GDYGKLGL---GNSTAKSSPQKVDI 4238
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 131 LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPR 189
LV + GE C G H+IA++ G V+SFG +G+LGHG T ++P+
Sbjct: 556 LVKDIINVGEVSC---------GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPK 606
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVE 246
I +LQG+ I + AG+ ++ ++ GQVYA+G + G +E T L P+L+E
Sbjct: 607 VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIE 660
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 304
L +V +IG+ LS + VY +WGN++ + G + +G L+ I
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPITKPKKVGGLDGI 718
Query: 305 PVVQIAAGYCYLLALACQPSGMAV 328
+ QI+AG + LA P V
Sbjct: 719 AIQQISAGTSHSLAWTALPRDRQV 742
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4360
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A++ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVS---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4094
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ V+Q + G +AV
Sbjct: 4095 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQMSCGFKHSAV 4152
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4209
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4267
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4327
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P L+T L+ N R + +S W A
Sbjct: 4328 GLG---------HTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 4364
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4133 EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4192
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4193 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4250
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4251 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4302
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4303 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4357
Query: 372 HAA 374
H+A
Sbjct: 4358 HSA 4360
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4053 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4112
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + I ++ G + VV+ DG +++FG G+ L
Sbjct: 4113 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4170
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4171 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4217
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4218 GDYGKLGL---GNSTAKSSPQKVDV 4239
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4092
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ V+Q++ G+ +
Sbjct: 4093 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHS- 4150
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4151 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4206
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4207 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4266
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4267 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4311
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4312 STGDVYAWGSNSEGQLGLGHTNHVRE 4337
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+LV L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLVEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4095
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4096 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4153
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST--DG 4210
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4268
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L V VA G T ++ GDVY++G L
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P L+T L+ N R + +S W A
Sbjct: 4329 GLG---------HTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 4365
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+V+ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4134 EALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4193
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4194 GQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4251
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 4252 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4303
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LA+ S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4304 GAEHTLAIT---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAGRC 4358
Query: 372 HAA 374
H+A
Sbjct: 4359 HSA 4361
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4093
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4094 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4151
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A + +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4152 --AVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4207
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4208 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4267
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ V L V V + HT A+T
Sbjct: 4268 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLAIT 4312
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4313 STGDVYAWGSNSEGQLGLGHTNHVRE 4338
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4054 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4113
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4114 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRL-- 4171
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4172 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSTDGSMVWAFGD 4218
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4219 GDYGKLGL---GNSTAKSSPQKVDV 4240
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+LVE L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLVEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 170/356 (47%), Gaps = 30/356 (8%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
K V +GS + GQLG G EEE PR IRS + ++ A G T+ + G+V +
Sbjct: 8 KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
G + +G+ + K P L++SL V+QA+ G + VL+ G+V+T+ D
Sbjct: 68 CGNNDYGQLGH----EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNED 123
Query: 281 ARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LG + P ++ L + VVQ+A G + + L +Y+ G G+L
Sbjct: 124 NQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQ---IYTWGSNNHGQL 180
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G ++T + P+ + L P+V VAAGA H V+ G + WG +G LG G++
Sbjct: 181 GLANKTPQNEPQWVSCISGL---PIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDD 237
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P +V+ L + +A GD + ++ DG V++FG G LGHN
Sbjct: 238 QDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT--------S 289
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 513
N L P+ V L + V QI+ H+ A + SG++Y FG G GQLG
Sbjct: 290 NNELLPRKVFEL--MGSSVTQIACGRK-----HSIAYVPSSGRVYVFGLGGNGQLG 338
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 150/305 (49%), Gaps = 9/305 (2%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
C E G H++ V G V S G+N GQLGH + RP I SL ++QA
Sbjct: 42 CNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCK--RPALIDSLGERNVLQA 99
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
++G + +++DAGQV+ +G + + G + + P++V L + VVQ A G+
Sbjct: 100 SSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAH 159
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G++YT+ N +LG + EP + + +P+V++AAG + L L
Sbjct: 160 TVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQ-WVSCISGLPIVRVAAGADHNLVLTI- 217
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
SG A+++ GC G+LG G D P L++ L N +A G H+ + +DG V
Sbjct: 218 -SG-ALFAWGCNSFGQLGVGDDQDRGAPTLVK--TLRNQGICALACGDDHSLALTRDGGV 273
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 441
T+G G YG LGH E +P+ V L +A G ++ V G VY FG G
Sbjct: 274 FTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGG 333
Query: 442 SASLG 446
+ LG
Sbjct: 334 NGQLG 338
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 6/230 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G +Y++GSN+ GQLG + P+ + + G+ I++ AAGA
Sbjct: 152 QVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADH 211
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++++ +G ++A+G +SFG + GV + +P LV++L+N + A G+ + L+R
Sbjct: 212 NLVLTISGALFAWGCNSFG--QLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTR 269
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V+TF G +LGH+T N++ P + L V QIA G + ++A PS V
Sbjct: 270 DGGVFTFGAGMYGQLGHNTSNNELLPRKVF-ELMGSSVTQIACGRKH--SIAYVPSSGRV 326
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
Y G G G+LG GS + P +++ + VV GA H + GQ
Sbjct: 327 YVFGLGGNGQLGTGSTVNRMSPAMVKG-PFVAFGAEVVDKGAIHFSQHGQ 375
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 15/270 (5%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQ 201
R QA +G HS +T G V+++GSN QLG G + PR +R L +++Q
Sbjct: 93 ERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQ 152
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
A G+ T+ ++ GQ+Y +G ++ G + G+ PQ V + + +V+ A G
Sbjct: 153 VACGSAHTVGLTATGQIYTWGSNNHG--QLGLANKTPQNEPQWVSCISGLPIVRVAAGAD 210
Query: 262 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
VL+ G + F+WG ++ +LG + + P L+ TL N + +A G + LAL
Sbjct: 211 HNLVLTISGAL--FAWGCNSFGQLGVGDDQDRGAP-TLVKTLRNQGICALACGDDHSLAL 267
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQ 378
V++ G G+ G+LGH + +E PR + F+L+ +A G H+ A V
Sbjct: 268 T---RDGGVFTFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPS 322
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
GRV +G G G LG G+ P +V+
Sbjct: 323 SGRVYVFGLGGNGQLGTGSTVNRMSPAMVK 352
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 25/305 (8%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V +G + G+ G + VT P+ + S N+ VV A G T + ++GRV +
Sbjct: 11 VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LGH + L+ +L V+Q ++G + L V++ G
Sbjct: 71 NDYGQLGHEKP---CKRPALIDSLGERNVLQASSGTKHSTVLT---DAGQVFTWGSNEDN 124
Query: 338 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+LG G PR++ L + + V VA G+ H + G++ TWG +G LG
Sbjct: 125 QLGRGQVDSASTSIPRMVRG--LADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
N+ ++ P+ V ++ + + VA G V++ G ++++GC LG + D Q
Sbjct: 183 ANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG---VGDDQ- 238
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+R A P LV +L+ N+ + ++ + H+ ALT G ++ FGAG GQLG
Sbjct: 239 DRGA----PTLVKTLR--NQGICALACGDD-----HSLALTRDGGVFTFGAGMYGQLGHN 287
Query: 516 LVNNQ 520
NN+
Sbjct: 288 TSNNE 292
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 22/195 (11%)
Query: 337 GKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G +E PR I F N++ V +A G H V +DGRV + G YG LG
Sbjct: 20 GQLGLGGLEEETVTLPREIRSF--CNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLG 77
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
H + C+ P ++ +L + + ++G + V+++ G V+++G E LG +
Sbjct: 78 H-EKPCKR-PALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDS-- 133
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
A+ P++V L + +VVQ++ + AHT LT +G++Y +G+ + GQLG+
Sbjct: 134 ----ASTSIPRMVRGL--ADHKVVQVACGS-----AHTVGLTATGQIYTWGSNNHGQLGL 182
Query: 515 ELVNNQTERGNPERV 529
N+T + P+ V
Sbjct: 183 A---NKTPQNEPQWV 194
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4099
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4100 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4157
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4214
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4272
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4333 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4197
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4198 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4255
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4256 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4307
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4308 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4362
Query: 372 HAA 374
H+A
Sbjct: 4363 HSA 4365
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4097
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4155
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4156 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4211
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4212 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4272 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4316
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4317 STGDVYAWGSNSEGQLGLGHTNHVRE 4342
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4175
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4176 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4222
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4223 GDYGKLGL---GNSTAKSSPQKVDV 4244
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 186/388 (47%), Gaps = 44/388 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQGIRIIQAAAGAGR 208
+G H+I V+ G VYS+G GQL G E+ +P I++L R+++ A G
Sbjct: 41 SGEAHNICVSRFGDVYSWGRGKEGQL--GVPEKMLFSTKPNLIKTLLHERVVKVACGNFH 98
Query: 209 TMLISDAGQVYAFGK-DSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ ++D G+VY +G+ +++ G++ T L+ P + + Q+ I N + L
Sbjct: 99 SLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKP-----KYQSIIENSVSQYL 153
Query: 267 SREGRVYTFSWGND--------------ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+ E +Y + GN+ +G + N P + G L N V+ I+AG
Sbjct: 154 NGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAG 213
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ + + A SG +++ G G+LG R P+L++ LL+++ V V+ G H
Sbjct: 214 WAF--SAAVTKSG-KIFTWGFNEKGQLGLKHRWFNSSPQLVK--TLLDVKIVSVSCGRQH 268
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSE 430
V +DG + TWG G +G LGH N + PK V A LN ++ V+ G T V+
Sbjct: 269 IGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGR 328
Query: 431 DGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+ +Y+FG GE A LG + G + H +P++V +L+ + V
Sbjct: 329 NQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCG----- 383
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ HT ALTE ++Y +G G G LG+
Sbjct: 384 --HLHTLALTEDNEVYVWGWGSSGCLGL 409
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 44/367 (11%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V S G+N +GQLG +E P+ + SL+G I+ ++G + +S G VY++G+
Sbjct: 3 VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62
Query: 226 FGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-----N 279
E + GV L T P L+++L + VV+ A GNF + L+ +GRVY WG +
Sbjct: 63 --EGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVY--EWGQLHKID 118
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
D++ G N + P + + +++ + YL +Y G
Sbjct: 119 DSKTGLEA-TNGLLEMPGMSKPKYQSIIENSVSQ-YL------NGEKEIYDSTSGNNDDD 170
Query: 340 GHGSRTDE---KHP-RLIEQFQ---------LLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S +++ KH ++I+ Q L N + + ++AG +A V + G++ TWG
Sbjct: 171 DEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWG 230
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ G LG + S P++V+ L DVK + V+ G V+EDGD+Y++G G LG
Sbjct: 231 FNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLG 290
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H+ + + L P+ V + +V Q+S ++ T L + LYAFG
Sbjct: 291 HSNV--------KSYLHPKKVAAFSLNGIQVSQVSCGSNF-----TMVLGRNQILYAFGH 337
Query: 507 GDKGQLG 513
G+ QLG
Sbjct: 338 GEYAQLG 344
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 160/344 (46%), Gaps = 40/344 (11%)
Query: 153 GPGHSIAVTSKGVVYSFG-------SNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAA 204
G HS+A+T +G VY +G S + + +G E +P +S+ + Q
Sbjct: 95 GNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLN 154
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV----TSPQLVESL-KNIFVVQAAIG 259
G + + S +G + S E G K++ T+P V+ L N V+ + G
Sbjct: 155 GE-KEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAG 213
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
F+A +++ G+++T+ + +LG + P L+ TL ++ +V ++ G ++ A+
Sbjct: 214 WAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ-LVKTLLDVKIVSVSCGRQHIGAV 272
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+Y+ G G+ G+LGH + HP+ + F L +Q V+ G+ V+G++
Sbjct: 273 T---EDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRN 329
Query: 380 GRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDVKAIHVATGDYTTF 426
+ +G G Y LG EE + S PKVV+AL D K +V G T
Sbjct: 330 QILYAFGHGEYAQLG-ATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTL 388
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
++ED +VY +G G S LG N+ R L PQLVTS+
Sbjct: 389 ALTEDNEVYVWGWGSSGCLGLNS------KRFQ--LVPQLVTSI 424
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 21/254 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+I +AG + ++ +G+++ +G + G+ G++ +SPQLV++L ++ +V +
Sbjct: 206 EVIDISAGWAFSAAVTKSGKIFTWGFNEKGQL--GLKHRWFNSSPQLVKTLLDVKIVSVS 263
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYL 316
G ++ +G +YT+ G +LGH + + P + +L I V Q++ G +
Sbjct: 264 CGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFT 323
Query: 317 LALACQPSGMAVYSVGCGLGGKLG---------HGSRTDE---KHPRLIEQFQLLNLQPV 364
+ L +Y+ G G +LG GSR + P+++E + ++
Sbjct: 324 MVLG---RNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIK-- 378
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
V G H + +D V WGWG GCLG ++ + VP++V +++ + ++ G+
Sbjct: 379 YVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEISCISAGEKH 438
Query: 425 TFVVSEDGDVYSFG 438
+ +V D+ SF
Sbjct: 439 SLIV-RGSDLTSFA 451
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V + G + G LG N + PKV+++L + ++G+ VS GDVYS+G G+
Sbjct: 3 VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
L G + P L+ +L ++ERVV+++ N H+ ALT+ G++
Sbjct: 63 EGQL-------GVPEKMLFSTKPNLIKTL--LHERVVKVACG-----NFHSLALTDQGRV 108
Query: 502 YAFG---AGDKGQLGIELVNNQTE 522
Y +G D + G+E N E
Sbjct: 109 YEWGQLHKIDDSKTGLEATNGLLE 132
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV--AAGAWHAAVVGQDGRVC 383
M+V SVG G+LG + + P+++E + V+V ++G H V + G V
Sbjct: 1 MSVISVGNNKNGQLGIENIKEHLEPKVLESLK----GKVIVSCSSGEAHNICVSRFGDVY 56
Query: 384 TWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+WG G+ G LG + S P +++ L + + VA G++ + +++ G VY +G
Sbjct: 57 SWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWG 112
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+ +LG +EP +L +L+ +V ++G + + C VYS G G G+L
Sbjct: 11 NGQLGIENIKEHLEP-KVLESLKGKVIVSCSSGEAHNI---CVSRFGDVYSWGRGKEGQL 66
Query: 340 GHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G + P LI+ LL+ + V VA G +H+ + GRV + WG+ +
Sbjct: 67 GVPEKMLFSTKPNLIKT--LLHERVVKVACGNFHSLALTDQGRV--YEWGQLHKIDDSKT 122
Query: 399 ECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E+ +++ ++ K + + ++ E ++Y G + + ++
Sbjct: 123 GLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEK-EIYDSTSGNNDDDDEASTSEQSKG 181
Query: 457 RHA------NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+H N TP V L NE V+ IS W A + A+T+SGK++ +G +KG
Sbjct: 182 KHIGKIIDYNQTTPIQVQGL-LANEEVIDISAG----W-AFSAAVTKSGKIFTWGFNEKG 235
Query: 511 QLGIE 515
QLG++
Sbjct: 236 QLGLK 240
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4360
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+LV L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLVEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVST--DG 4204
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4323 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4359
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+V+ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4297
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4352
Query: 372 HAA 374
H+A
Sbjct: 4353 HSA 4355
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4202 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4306
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSTDGSMVWAFGD 4212
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+LVE L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLVEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 176/375 (46%), Gaps = 36/375 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ S+GS GQLG G EE+ +++L + AG+ ++ I + G+++ +G +
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK P V++L N +VQAAIG + + +GR Y + + G
Sbjct: 68 RGTLGHPPE-TKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126
Query: 286 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
E D PL + + V Q+AAG + + L + V++ G
Sbjct: 127 EPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGH---VWT----WGQP 179
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 180 WPPGDIKQISTPVRVQGLEKVRL----IAVGAFHNLALLEDGILWAWGNNEYGQLGTGDT 235
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ S P VQ L+D+ + +A G + + +++DG VY +G GE LG G+
Sbjct: 236 QPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGF-------GDDK 288
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
++ + PQ V L V E +VQIS + H+ ALT G++++FG GD G+LG
Sbjct: 289 SSKMVPQKVQLL--VEENIVQISCGGT-----HSVALTRDGRMFSFGRGDHGRLGY---G 338
Query: 519 NQTERGNPERVDIDL 533
+ G+P V I+L
Sbjct: 339 RKVTTGHPMEVPINL 353
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 159/330 (48%), Gaps = 32/330 (9%)
Query: 129 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWR 187
W ++ L A C +AG +S+A+ G ++++G N G LGH T+ E
Sbjct: 29 WVCAVKALAAQNVC------SVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENI 82
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 239
P +++L +I+QAA G + + D G+ YA+G + +G+ + G + +
Sbjct: 83 PSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI 142
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
T PQ S + V Q A G + VL+REG V+T+ G P D++
Sbjct: 143 TIPQRCAS--KLSVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISTPV 192
Query: 300 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
++ + V+ IA G + LAL G+ +++ G G+LG G P ++
Sbjct: 193 RVQGLEKVRLIAVGAFHNLALL--EDGI-LWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD 249
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIH 417
L L V +AAG WH+ + DG V WG G +G LG G+++ VP+ VQ L + +
Sbjct: 250 LTL--VDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ 307
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++ G + ++ DG ++SFG G+ LG+
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGY 337
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 48/237 (20%)
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
+A +P A+ S G G G+LG G+ +++ ++ N+ VV AG+ ++ + +
Sbjct: 1 MASKPK--AIISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVV--AGSRNSLAICE 56
Query: 379 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG++ TWGW + G LGH E + E++P V+AL + K + A G + V + G Y++
Sbjct: 57 DGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAW 116
Query: 438 G------CGE----------------------SASLGHNAIADGQGNRHANVLT------ 463
G CGE ++ L +A G H+ VLT
Sbjct: 117 GGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVA--AGGTHSVVLTREGHVW 174
Query: 464 ----PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
P +KQ++ RV + I A H AL E G L+A+G + GQLG
Sbjct: 175 TWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLG 231
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4204
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L V VA G T ++ GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4323 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4359
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4297
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4352
Query: 372 HAA 374
H+A
Sbjct: 4353 HSA 4355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4202 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ V L V V + HT AL
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 4306
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4307 STGDVYAWGSNSEGQLGLGHTNHVRE 4332
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4212
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4322 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4358
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4351
Query: 372 HAA 374
H+A
Sbjct: 4352 HSA 4354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 173/364 (47%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 309 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358
Query: 511 QLGI 514
QLGI
Sbjct: 359 QLGI 362
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 27/332 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVTC 74
Query: 259 GNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G + L
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCL 133
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 134 AVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAVT 188
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y++
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTY 248
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 249 GWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALTS 293
Query: 498 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 294 DGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSY 241
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALT---SDGKL 297
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALS 378
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H++A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 331 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 377
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 339 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 398
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 399 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 456
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 457 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 516
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 517 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 569
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 630 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 673
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 674 HCLALSHDNEVYAWGNNSMGQCG 696
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 402 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 459
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 460 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 517
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 518 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 575 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 630
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 631 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 688
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 689 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 161/354 (45%), Gaps = 26/354 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4092
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4093 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4150
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC---- 321
++ +G+++TF G+ RLG N P + LE + Q + L +AC
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQARNNTLFFLQVACGLNH 4209
Query: 322 ----QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
G V++ G G GKLG G+ T + P+ ++ + ++ VA G + +
Sbjct: 4210 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALT 4267
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG V T+G R L G + P+ + L V VA G T ++ GDVY++
Sbjct: 4268 KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4327
Query: 438 GCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G LG H N V P LVT L+ N R + +S W A
Sbjct: 4328 GSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4372
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 33/253 (13%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4131 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4190
Query: 200 ----------IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L
Sbjct: 4191 GQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVL 4248
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTL 301
I + + A G F+ L+++G VYTF G D +G +H P + P+L
Sbjct: 4249 CGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA-- 4301
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+ + +A G + LALA S VY+ G G+LG G + P L+ Q N+
Sbjct: 4302 -GVVIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNV 4357
Query: 362 QPVVVAAGAWHAA 374
+ ++AG H+A
Sbjct: 4358 RQ--ISAGRCHSA 4368
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 28/213 (13%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4051 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4110
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4111 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4168
Query: 448 NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNA------HTFALTESG 499
G GN +N P+ VT+L+ Q+ + + N++++ HT A++ G
Sbjct: 4169 -----GLGNT-SNKKLPERVTALEGYQIGQ-----ARNNTLFFLQVACGLNHTLAVSADG 4217
Query: 500 KL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+ +AFG GD G+LG+ N T + +P++VD+
Sbjct: 4218 SMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 4247
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 39/337 (11%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4090
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4091 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4148
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-----------LLNLQPVVV 366
A S +++ G G G+LG G+ +++K P + + L LQ V
Sbjct: 4149 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQ---V 4203
Query: 367 AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
A G H V DG V +G G YG LG GN +S P+ V L + VA G +
Sbjct: 4204 ACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFS 4263
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+++DG VY+F G+ +G + +G+ H PQ + L V V +
Sbjct: 4264 VALTKDGHVYTF--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG---- 4311
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
HT AL +G +YA+G+ +GQLG+ N+ E
Sbjct: 4312 ---AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4345
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 567 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 626
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 627 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 680
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 681 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 736
Query: 325 GMAV 328
V
Sbjct: 737 DRQV 740
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4057
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4058 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4115
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4172
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4230
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4291 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4327
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4096 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4155
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4156 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4213
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4214 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4265
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4266 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4320
Query: 372 HAA 374
H+A
Sbjct: 4321 HSA 4323
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4055
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4056 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4113
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4114 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4169
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4170 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4229
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4230 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4274
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4275 SNGDVYAWGSNSEGQLGLGHTNHVRE 4300
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4016 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4075
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4076 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4133
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4134 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4180
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4181 GDYGKLGL---GNSTAKSSPQKVDV 4202
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4079
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4080 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4137
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4194
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4252
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4313 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4349
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4118 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4177
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4178 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4235
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4236 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4287
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4288 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4342
Query: 372 HAA 374
H+A
Sbjct: 4343 HSA 4345
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4077
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4078 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4135
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4136 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4191
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4192 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4251
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4252 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4296
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4297 STGDVYAWGSNSEGQLGLGHTNHVRE 4322
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4038 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4097
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4098 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4155
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4156 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4202
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4203 GDYGKLGL---GNSTAKSSPQKVDV 4224
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 160/325 (49%), Gaps = 29/325 (8%)
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
P+R R++ +AGA ++ + V ++G+ G+ +G +L SP + +L
Sbjct: 6 PVR-----RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALD 58
Query: 250 NIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+V G + TA VY++ WG+ RLGH + + P P+ L + + Q
Sbjct: 59 GHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIK-ALHGLKIRQ 117
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
IA G + LA+ + V S G G+LG G+ D P+ I+ F+ ++++ +VAA
Sbjct: 118 IACGDSHCLAVTMEGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIK--MVAA 172
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
GA H A V +DG + WGWGRYG LG G+ VP+ V +++ K + VA G T V
Sbjct: 173 GAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV 232
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S G +Y++G + LGH D L P + +L+ N + QIS W
Sbjct: 233 SSLGGLYTYGWSKYGQLGHGDFED--------RLVPHRLEALRGDN--ISQISGG----W 278
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
HT ALT GKLY +G GQ+G
Sbjct: 279 R-HTMALTTDGKLYGWGWNKFGQVG 302
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 172/363 (47%), Gaps = 24/363 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G I+ GA T
Sbjct: 15 AGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTA 74
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S A +VY++G FG +G + L+T P+ +++L + + Q A G+ ++ EG
Sbjct: 75 YSVARTEVYSWGWGDFGRLGHG-NSSDLLT-PKPIKALHGLKIRQIACGDSHCLAVTMEG 132
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + E I + +AAG + A+ ++
Sbjct: 133 EVQSWGRNQNGQLGLGTTEDSLVPQKIQ-AFEGISIKMVAAGAEHTAAVT---EDGELFG 188
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P+ + + V+VA G H V G + T+GW +Y
Sbjct: 189 WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKM--VMVACGWRHTISVSSLGGLYTYGWSKY 246
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP ++AL ++ G T ++ DG +Y +G + +G
Sbjct: 247 GQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDN 306
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D H + + + +++V+QIS W HT A+T+ ++++G G G
Sbjct: 307 ID-----HCSPIQIKFPQ-----DQKVIQISCG----WR-HTLAVTDKQNVFSWGRGTNG 351
Query: 511 QLG 513
QLG
Sbjct: 352 QLG 354
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 159/327 (48%), Gaps = 22/327 (6%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGV------------VYSFGSNSSGQLGHGTTEEEW 186
G+A R +Q A GH I + G VYS+G G+LGHG + +
Sbjct: 43 GDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLL 102
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+PI++L G++I Q A G + ++ G+V ++G++ G+ G LV PQ ++
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 160
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+ + I + A G TA ++ +G ++ + WG LG + + P + +++ +
Sbjct: 161 AFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQK-VSSVDGDKM 219
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V +A G+ + ++++ S +Y+ G G+LGHG D P +E + N+ +
Sbjct: 220 VMVACGWRHTISVS---SLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQI-- 274
Query: 367 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+G W H + DG++ WGW ++G +G G+ P ++ D K I ++ G T
Sbjct: 275 -SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHT 333
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIAD 452
V++ +V+S+G G + LGH D
Sbjct: 334 LAVTDKQNVFSWGRGTNGQLGHGESVD 360
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 129/264 (48%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG GTTE+ P+ I++ +GI I AAGA
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEH 176
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G+++ +G +G G + +LV PQ V S+ +V A G T +S
Sbjct: 177 TAAVTEDGELFGWGWGRYGNLGLGDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSS 234
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L + QI+ G+ + +AL +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGK---L 290
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q + Q V+ + W H V V +WG
Sbjct: 291 YGWGWNKFGQVGAGDNIDHCSPI---QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGR 347
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG + P +++AL+
Sbjct: 348 GTNGQLGHGESVDRNTPMILEALS 371
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 26/226 (11%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ I+AG + +AL SG V S G G G+LGHG D P Q L+ +V
Sbjct: 10 VLFISAGASHSVALL---SGNIVCSWGRGEDGQLGHGDAEDRLSP---TQLSALDGHEIV 63
Query: 366 -VAAGAWHAAVVG-QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
V GA H V +WGWG +G LGHGN PK ++AL+ +K +A GD
Sbjct: 64 SVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDS 123
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
V+ +G+V S+G ++ LG D L PQ + + + ++ ++V
Sbjct: 124 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDS--------LVPQKIQAFEGISIKMVAAGA- 174
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT A+TE G+L+ +G G G LG+ ++ +R P++V
Sbjct: 175 ------EHTAAVTEDGELFGWGWGRYGNLGL---GDRNDRLVPQKV 211
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4085
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4086 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4143
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4200
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4258
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4319 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4124 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4183
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4184 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4241
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4242 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4293
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4294 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4348
Query: 372 HAA 374
H+A
Sbjct: 4349 HSA 4351
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4083
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4084 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4141
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4142 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4197
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4198 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4257
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4258 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4302
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4303 STGDVYAWGSNSEGQLGLGHTNHVRE 4328
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4044 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4103
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4104 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4161
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4162 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4208
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4209 GDYGKLGL---GNSTAKSSPQKVDV 4230
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPLVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIR 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4087
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4088 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4145
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSS--DG 4202
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4260
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4321 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4357
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 30/353 (8%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS IR +
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS---IRKV 460
Query: 201 QAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAI 258
++ G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV +
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSA 518
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G +A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +A
Sbjct: 519 GYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIA 575
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 576 LS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTS 631
Query: 379 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++
Sbjct: 632 TGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAW 689
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G + S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 690 G---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 143/281 (50%), Gaps = 16/281 (5%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAA 203
R+ S + GH++A T++G V+S+G G+LGHG + + P+ I+ LQG ++ +
Sbjct: 458 RKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG + +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHT 573
Query: 264 AVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
LS++GR V++F G++ +LGH + N V ++ L+ + + ++ AG LAL
Sbjct: 574 IALSKDGRTVWSFGGGDNGKLGH-GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT-- 630
Query: 323 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
S VY+ GCG LG GS P+LIE+ + V ++ G H + D
Sbjct: 631 -STGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRI--VDISIGDSHCLALSHDNE 685
Query: 382 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 421
V WG G G GN + PK V L+ + ++ G
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4126 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4185
Query: 200 IQAAAGAGRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ + SD V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4186 GQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4243
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4244 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4295
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4296 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 4350
Query: 372 HAA 374
H+A
Sbjct: 4351 HSA 4353
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4085
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4086 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4143
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4144 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4199
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4200 SDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4259
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4260 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4304
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4305 STGDVYAWGSNSEGQLGLGHTNHVRE 4330
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4046 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4106 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4163
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4164 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSSDGSMVWAFGD 4210
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4211 GDYGKLGL---GNSTAKSSPQKVDV 4232
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 166/376 (44%), Gaps = 81/376 (21%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S GVV S+G GQLGHG E+ RP P T+L
Sbjct: 27 AGASHSVALLSGGVVCSWGRGEDGQLGHGDAED--RPVP------------------TVL 66
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ +F +A GV + + + TA E +
Sbjct: 67 TA-----------AFDDAPGGVASVVICGA------------------DHTTAYSDEELQ 97
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+Y++ WG+ RLGH + P P+ L+ + + QIA G + LA+ V+S
Sbjct: 98 LYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSHCLAVTVAGH---VHSW 153
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V +DG + WGWGRYG
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + +P+ V ++N K + VA G T VS G +Y++G + LGH
Sbjct: 212 NLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 452 DGQGNRHANVLTPQLVTSLKQVN---ERVVQI----------SLTNSIYWNAHTFALTES 498
D L P + +LK E V++ + I W AL
Sbjct: 272 DH--------LVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQW-----ALAAD 318
Query: 499 GKLYAFGAGDKGQLGI 514
GKLY +G GQ+G+
Sbjct: 319 GKLYGWGWNKFGQVGV 334
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 186/397 (46%), Gaps = 37/397 (9%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S I G H+ A + + + +YS+G G+LGHG + + + P+PI++LQG+RI Q A G
Sbjct: 79 SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGD 138
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG V+++G++ G + G+ T+ PQ +++ + + V A G TA +
Sbjct: 139 SHCLAVTVAGHVHSWGRNQNG--QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAV 196
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++ +V +A G+ + + ++ S
Sbjct: 197 TEDGDLYGWGWGRYGNLGLGDRDDRLIPEK-VSSVNGQKMVLVACGWRHTITVSSSGS-- 253
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ---------------FQLLNLQPVVVAAG-A 370
+Y+ G G+LGHG D P +E F L + V G
Sbjct: 254 -IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQ 312
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
W A DG++ WGW ++G +G G+ E P V N+ K + VA G T ++E
Sbjct: 313 WALAA---DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTE 369
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+V+S+G G S LGH I D N+ P+++ +L Q+ + ++ +A
Sbjct: 370 AKNVFSWGRGTSGQLGHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAVPMSA 421
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+ + YA +K GI N TE P+
Sbjct: 422 KVW--VSPSERYAIVPDEKAGKGIP-AGNGTETHVPQ 455
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 339 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 398
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 399 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 456
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 457 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 516
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 517 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 569
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 630 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 673
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 674 HCLALSHDNEVYAWGNNSMGQCG 696
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 402 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 459
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 460 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 517
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 518 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 575 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 630
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 631 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 688
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 689 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 160/346 (46%), Gaps = 31/346 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3628
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3629 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3686
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P ++A G + LA++ G
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSA--DG 3732
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 3733 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 3790
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L V VA G T ++ GDVY++G L
Sbjct: 3791 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 3850
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 3851 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 3887
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 38/326 (11%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3626
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 3627 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3684
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P VA G H V
Sbjct: 3685 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER-------------VACGLNHTLAVS 3729
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 3730 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 3789
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ V L V V + HT AL
Sbjct: 3790 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 3834
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 3835 STGDVYAWGSNSEGQLGLGHTNHVRE 3860
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 3587 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3646
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 3647 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 3704
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN TS K++ ERV L HT A++ G + +AFG
Sbjct: 3705 -----GLGN-----------TSNKKLPERVA-CGLN-------HTLAVSADGSMVWAFGD 3740
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 3741 GDYGKLGL---GNSTAKSSPQKVDV 3762
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 567 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 626
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 627 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 680
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 681 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 736
Query: 325 GMAV 328
V
Sbjct: 737 DRQV 740
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 34/243 (13%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P
Sbjct: 3667 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE---------- 3716
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 3717 -RVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 3773
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 3774 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 3825
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 3826 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 3880
Query: 372 HAA 374
H+A
Sbjct: 3881 HSA 3883
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 179/384 (46%), Gaps = 35/384 (9%)
Query: 140 EACCR--RENSQAIAGP------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 191
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 342 EEVCRMASDYSRTCASPDSIQTGGDAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLA 401
Query: 192 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 402 PSFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI 459
Query: 252 FVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++
Sbjct: 460 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 519
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
AGY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 520 AGYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGS 572
Query: 371 WHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 573 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 632
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 633 STGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS---- 677
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 678 -HCLALSHDNEVYAWGNNSMGQCG 700
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4181
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4182 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4239
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + ++A G + L ++ G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPE-RVAALEGYQIGEVACGLNHTLVVSTD--G 4296
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ V A G + + +DG V T+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACGTQFSVALTKDGHVYTF 4354
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V AL+ V +A G T +S GDVY++G L
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQL 4414
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVTSL+ + R + +S W++
Sbjct: 4415 GLG---------HTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSS 4451
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 406 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 463
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 521
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 522 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 578
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 579 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 634
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 635 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 692
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V + + ++S+ W A
Sbjct: 693 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 737
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 30/361 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G+ GQL P Q ++I G T +I G V A G+ S
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSPSFCQAQQVI---CGQNCTFVIQANGTVLACGEGS 4146
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDAR 282
+G G V + ++ +L+ V Q + + L+ G V+++ G+ +
Sbjct: 4147 YGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH P + L+ VVQ++ G+ + A + +++ G G G+LG G
Sbjct: 4205 LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLG 4260
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECE 401
+ +++K P + + Q VA G H VV DG V +G G YG LG GN +
Sbjct: 4261 NTSNKKLPERVAALE--GYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK 4318
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S P+ V L + VA G + +++DG VY+FG + +G + +G+ H
Sbjct: 4319 SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRLIG---LPEGRARNHNR- 4372
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
PQ V +L V + + HT AL+ SG +YA+G+ +GQLG+ N+
Sbjct: 4373 --PQQVPALSGVFVEDIAVG-------AEHTLALSASGDVYAWGSNSEGQLGLGHTNHVR 4423
Query: 522 E 522
E
Sbjct: 4424 E 4424
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4220 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQI 4279
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ A G T+++S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4280 GEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4337
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V L + V IA
Sbjct: 4338 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALSGVFVEDIAV 4389
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LAL+ SG VY+ G G+LG G + P L+ Q +++ ++AG
Sbjct: 4390 GAEHTLALSA--SG-DVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQ--ISAGRC 4444
Query: 372 HAA 374
H+A
Sbjct: 4445 HSA 4447
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4140 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4199
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4200 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4257
Query: 448 NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKL-YAF 504
G GN +N P+ V +L+ Q+ E ++ HT ++ G + +AF
Sbjct: 4258 -----GLGNT-SNKKLPERVAALEGYQIGEVACGLN---------HTLVVSTDGSMVWAF 4302
Query: 505 GAGDKGQLGIELVNNQTERGNPERVDI 531
G GD G+LG+ N T + +P++VDI
Sbjct: 4303 GDGDYGKLGL---GNSTAKSSPQKVDI 4326
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 571 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 630
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 631 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 684
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 685 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALP 739
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 168/352 (47%), Gaps = 29/352 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY+ G GQLG G + P + +L G I+ AA T ++D G+VY G +
Sbjct: 4 VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARL 283
G+ GV+G + P V +L V A G T ++ G + SWG D +L
Sbjct: 64 AGQ--LGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALA--SWGGDEYGQL 119
Query: 284 GHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
G + + V+P + G+ ++ ++AAG + LAL VYS G G G LGH
Sbjct: 120 GFDSGNIVDGVQPRIVKGS-RDLHFSRVAAGGYHTLALTGSGD---VYSFGDGSSGALGH 175
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G+ P L++ L L +A G H+A + DG+V TWG G+YG LGHG+ +
Sbjct: 176 GNLDGCSTPSLVKS--LWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI 233
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P V+AL D I +A G T ++ DG ++S+G G GH D V
Sbjct: 234 KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKED--------V 285
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L+P+ V L+ +VQ+S HT L + G++Y +G ++ QLG
Sbjct: 286 LSPKQVHQLE--GRVLVQVSAGAR-----HTVVLLDRGEVYGWGDCEQRQLG 330
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+ +T +G VY+ GSN +GQLG EE+ P + +L + A G T+ +++
Sbjct: 46 HTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTET 105
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G + ++G D +G+ + P++V+ +++ + A G + T L+ G VY+F
Sbjct: 106 GALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSF 165
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G+ LGH P L+ +L + V QIA G + AL V++ G G
Sbjct: 166 GDGSSGALGHGNLDGCSTP-SLVKSLWGLGVTQIACGENHSAALTVDGK---VFTWGRGK 221
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LGHGS + K P ++ L++ + +A G H + DGR+ +WG G +G GH
Sbjct: 222 YGQLGHGSTQNIKLPVAVK--ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGH 279
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +E PK V L + V+ G T V+ + G+VY +G E LG
Sbjct: 280 GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ AG H++A+T G VYSFG SSG LGHG + P ++SL G+ + Q A G
Sbjct: 144 SRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGEN 203
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+ +G+ +G+ +G T+ + P V++L + V+Q A G T ++
Sbjct: 204 HSAALTVDGKVFTWGRGKYGQLGHG--STQNIKLPVAVKALVDHDVIQIACGGDHTLAIT 261
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+GR++++ G + GH T+ + + P + LE +VQ++AG + + L
Sbjct: 262 SDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH-QLEGRVLVQVSAGARHTVVL 312
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+AVY++G G G+LG G +D HP L+ V +AA +H A + +G V T
Sbjct: 1 GVAVYALGRGDLGQLGIGDYSD--HPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT 58
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G G LG E + VP V AL+ H+A G T V+E G + S+G E
Sbjct: 59 TGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118
Query: 445 LGHNA--IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LG ++ I DG + P++V + ++ V HT ALT SG +Y
Sbjct: 119 LGFDSGNIVDG--------VQPRIVKGSRDLHFSRVAAG-------GYHTLALTGSGDVY 163
Query: 503 AFGAGDKGQLG 513
+FG G G LG
Sbjct: 164 SFGDGSSGALG 174
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%)
Query: 133 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
++ +A +A + Q G H++A+TS G ++S+G GQ GHGT E+ P+ +
Sbjct: 233 IKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH 292
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
L+G ++Q +AGA T+++ D G+VY +G
Sbjct: 293 QLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G G LG G+ P + L +H+A DY T ++++G+VY+ G ++ L
Sbjct: 8 GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G + + + P V +L V I+ HT A+TE+G L ++G
Sbjct: 68 GVRGMEE--------QVVPIRVAALD--THMVTHIACGFK-----HTVAVTETGALASWG 112
Query: 506 AGDKGQLGIELVN 518
+ GQLG + N
Sbjct: 113 GDEYGQLGFDSGN 125
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L V + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4019
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ V+Q + G +AV
Sbjct: 4020 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQMSCGFKHSAV 4077
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4134
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4192
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V +A G T ++ GDVY++G L
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQL 4252
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P L+T L+ N R + +S W A
Sbjct: 4253 GLG---------HTNHVREPTLITILQGKNIRQISAGRCHSAAWTA 4289
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 63/363 (17%)
Query: 177 LGHGTTEEEWRPRPIRSLQGI------------RIIQAAAGAGRTM------------LI 212
LG +WR P RS G+ + + A+ RT ++
Sbjct: 310 LGSSADRSQWR-EPTRSSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIV 368
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G V
Sbjct: 369 SETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSV 424
Query: 273 YTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
G+ RLG N EPH +++ + + + G+ LA G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TLAFTTEG 477
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +DG + TW
Sbjct: 478 -EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 444
G G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G NR V P+++ +L+ + R V +S+ ALT +G++YA+
Sbjct: 594 LGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTSTGQVYAW 638
Query: 505 GAG 507
G G
Sbjct: 639 GCG 641
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4058 EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4117
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4118 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4175
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + IA
Sbjct: 4176 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDIAV 4227
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P LI Q N++ ++AG
Sbjct: 4228 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQ--ISAGRC 4282
Query: 372 HAA 374
H+A
Sbjct: 4283 HSA 4285
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 3978 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4037
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + I ++ G + VV+ DG +++FG G+ L
Sbjct: 4038 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4095
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4096 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4142
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4143 GDYGKLGL---GNSTAKSSPQKVDV 4164
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4017
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ V+Q++ G+ +
Sbjct: 4018 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHS- 4075
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4076 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4131
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4132 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4191
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V + + HT AL
Sbjct: 4192 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDIAVG-------AEHTLALA 4236
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4237 STGDVYAWGSNSEGQLGLGHTNHVRE 4262
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ + + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGVAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L G +I+ GA T+
Sbjct: 13 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 72
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 73 YSQSGXEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTXEG 130
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 131 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKXVAAGAEHTAAVTEDGD---LYG 186
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G RTD P + + VA G H V G + T+GW +Y
Sbjct: 187 WGWGRYGNLGLGDRTDRLVPERVTSTG--GEKXSXVACGWRHTISVSYSGALYTYGWSKY 244
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G + +
Sbjct: 245 GQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQV----- 299
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 300 --GVGN---NLDQCSPVQVRFPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 349
Query: 511 QLGI 514
QLGI
Sbjct: 350 QLGI 353
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 27/333 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 7 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 64
Query: 258 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 65 CGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 123
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA+ + V S G G+LG G D P+ I+ F+ + ++ VAAGA H A V
Sbjct: 124 LAVTXEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--XVAAGAEHTAAV 178
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LGH + D L P + +L N + QIS HT ALT
Sbjct: 239 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGGAR-----HTXALT 283
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N ++ +P +V
Sbjct: 284 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 313
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEH 174
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S A G T +S
Sbjct: 175 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVSY 232
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G + AL S +
Sbjct: 233 SGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGARHTXALT---SDGKL 288
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q + + Q VV + W H V + V WG
Sbjct: 289 YGWGWNKFGQVGVGNNLDQCSP---VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 345
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 346 GTNGQLGIGESVDRNFPKIIEALS 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
+ S G H+I+V+ G +Y++G + GQLGHG E+ P + +L I Q + G
Sbjct: 216 KXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG 275
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
A T ++ G++Y +G + FG+ GV SP V + VVQ + G T
Sbjct: 276 ARHTXALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLA 333
Query: 266 LSREGRVYTFSWGNDARLG 284
++ V+ + G + +LG
Sbjct: 334 VTERNNVFAWGRGTNGQLG 352
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA SQ G H+ A+TS G +Y +G N GQ+G G ++ P +R ++
Sbjct: 262 EALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 321
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+Q + G T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 322 VQVSCGWRHTLAVTERNNVFAWGRGTNG--QLGIGESVDRNFPKIIEAL 368
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 20/347 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G VT +G V++ G + G+LG G+ E P I S+Q + I Q + AG
Sbjct: 1444 QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGG 1503
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S+ G+VY++G+ G+ +G + + + P+++ESL+ +V+ A G +A +
Sbjct: 1504 KHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATGGSHSAAI 1561
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L++ VV +A G L C G
Sbjct: 1562 NATGGLYTWGKGRYGRLGHEDSEDQLKPK-LVNALKDNLVVDVACGNGDAQTL-CITEGT 1619
Query: 327 ----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
V+S G G GKLG G K P +I+ L+ VA G+ + + + G V
Sbjct: 1620 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIID--TLMGKHITHVACGSQFSLALSKAGGV 1677
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
TWG G Y LGHG++E PK++++L +K + V+ G ++GDVY++G +
Sbjct: 1678 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1737
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+G Q P+LV +L+ + V +++ W+
Sbjct: 1738 GQIGDGTTQATQ--------IPRLVAALQGHHISHVSCGSAHTVAWS 1776
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 31/365 (8%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G ++ +G N GQLG + P P SL ++ IQ G ++ G
Sbjct: 1400 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEG 1459
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
+V+A G + G G+ + V P L+ES++++ + Q ++ G LS EG VY+
Sbjct: 1460 KVFATGYGAGG--RLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYS 1517
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ G D +LGH + P ++ +L +V++A G + + A +G +Y+ G G
Sbjct: 1518 WGEGVDGKLGHGNRSSLDHPR-IIESLRGDLIVKVATGGSH--SAAINATG-GLYTWGKG 1573
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----GQDGRVCTWGW--G 388
G+LGH D+ P+L+ + NL V VA G A + G G W W G
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALK-DNLV-VDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1631
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LG G + VP ++ L HVA G + +S+ G VY++G G+ LGH
Sbjct: 1632 DYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHG 1691
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ +V P+L+ SL+ + +VV++S+ + H A ++G +Y +G D
Sbjct: 1692 S--------DEHVRRPKLIESLRGM--KVVEVSVG-----SLHCIAAVDNGDVYTWGDND 1736
Query: 509 KGQLG 513
+GQ+G
Sbjct: 1737 EGQIG 1741
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQ 195
+A + R + +Q I G AVT G VY+ G ++SG+LG G T R + Q
Sbjct: 455 VASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQ 514
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
I+ + +G M ++ G VY++G G+ +G + L +P+ +E+ +
Sbjct: 515 PIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL--TPRKIETFPEKCIRD 572
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G+ +A + G +YT+ G RLGH ++P P+ L VVQ+A G
Sbjct: 573 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRD 631
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
L G+ VYS G G GKLG G P+ +E+ L+ Q VV + GA +
Sbjct: 632 AQTLCLTQDGL-VYSWGDGDFGKLGRGGSDGCCVPKPVER---LSGQDVVKIECGAQFSL 687
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ + G V TWG G Y LGHG+++ P+VV+ L + K + VA G V+E G V
Sbjct: 688 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 747
Query: 435 YSFG 438
+++G
Sbjct: 748 FAWG 751
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 165/355 (46%), Gaps = 34/355 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P + LQ +++ Q G+ ++ G+VYA G+ +
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 491
Query: 226 FGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
G G V V PQ ++ L G L+ +G VY++ G +
Sbjct: 492 SGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEE 545
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH + + + P + T + I+ G + A+ S +Y+ G G+ G+LG
Sbjct: 546 GKLGHGSRADALTPRKI-ETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYGRLG 601
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNE 398
HG+ P+ ++ L Q V VA G+ A + QDG V +WG G +G LG G
Sbjct: 602 HGNNHTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 659
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ VPK V+ L+ + + G + +S G V+++G G+ LGH + ++H
Sbjct: 660 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS------DQH 713
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ+V L++ +VV +++ H A+TE G+++A+G D GQ G
Sbjct: 714 --VRRPQVVEGLRE--HKVVDVAVG-----ALHCLAVTEGGQVFAWGDNDHGQQG 759
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G VYS+G G+LGHG+ + PR I + I + G+ +
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 582
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I +G +Y +G +G +G T L P+ V++L VVQ A G + T L+++
Sbjct: 583 IGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQD 640
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY++ G+ +LG P P + L VV+I G + LAL+ G+ V+
Sbjct: 641 GLVYSWGDGDFGKLGRGGSDGCCVPKP-VERLSGQDVVKIECGAQFSLALS--RCGL-VW 696
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + P+++E L + V VA GA H V + G+V WG
Sbjct: 697 TWGKGDYFRLGHGSDQHVRRPQVVE--GLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 754
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G+G P VQ L VK +A G
Sbjct: 755 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 786
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L L+P+ + G V +G+V G+G G LG G+ E ++P +++++ V
Sbjct: 1437 LAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1496
Query: 418 VAT--GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
V+ G +S +G+VYS+G G LGH GNR +++ P+++ SL+ +
Sbjct: 1497 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGH-------GNR-SSLDHPRIIESLR--GD 1546
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+V+++ S H+ A+ +G LY +G G G+LG E +Q
Sbjct: 1547 LIVKVATGGS-----HSAAINATGGLYTWGKGRYGRLGHEDSEDQ 1586
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H +AVT G V+++G N GQ G+G T +P ++ L+G++I + A G+ ++
Sbjct: 733 VGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIA 792
Query: 212 ISDAGQ 217
+D
Sbjct: 793 FADTSH 798
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4093
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4094 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4151
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4208
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4266
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4327 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4363
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4191
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4192 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4249
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + PLL + + +A
Sbjct: 4250 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PLLA---GVIIEDVAV 4301
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4302 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4356
Query: 372 HAA 374
H+A
Sbjct: 4357 HSA 4359
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4091
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4149
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4150 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4205
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4206 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4265
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4266 F--GQDRLIG---LPEGRARNHNR---PQQIPLLAGVIIEDVAVG-------AEHTLALA 4310
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4311 SNGDVYAWGSNSEGQLGLGHTNHVRE 4336
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4169
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4170 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4216
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4217 GDYGKLGL---GNSTAKSSPQKIDV 4238
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 20/347 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q + G VT +G V++ G + G+LG G+ E P I S+Q + I Q + AG
Sbjct: 1443 QLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGG 1502
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S+ G+VY++G+ G+ +G + + + P+++ESL+ +V+ A G +A +
Sbjct: 1503 KHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVATGGSHSAAI 1560
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G +YT+ G RLGH + ++P L+ L++ VV +A G L C G
Sbjct: 1561 NATGGLYTWGKGRYGRLGHEDSEDQLKPK-LVNALKDNLVVDVACGNGDAQTL-CITEGT 1618
Query: 327 ----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
V+S G G GKLG G K P +I+ L+ VA G+ + + + G V
Sbjct: 1619 GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIID--TLMGKHITHVACGSQFSLALSKAGGV 1676
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
TWG G Y LGHG++E PK++++L +K + V+ G ++GDVY++G +
Sbjct: 1677 YTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDE 1736
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+G Q P+LV +L+ + V +++ W+
Sbjct: 1737 GQIGDGTTQATQ--------IPRLVAALQGHHISHVSCGSAHTVAWS 1775
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 31/365 (8%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G ++ +G N GQLG + P P SL ++ IQ G ++ G
Sbjct: 1399 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEG 1458
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
+V+A G + G G+ + V P L+ES++++ + Q ++ G LS EG VY+
Sbjct: 1459 KVFATGYGAGG--RLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYS 1516
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ G D +LGH + P ++ +L +V++A G + + A +G +Y+ G G
Sbjct: 1517 WGEGVDGKLGHGNRSSLDHPR-IIESLRGDLIVKVATGGSH--SAAINATG-GLYTWGKG 1572
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV----GQDGRVCTWGW--G 388
G+LGH D+ P+L+ + NL V VA G A + G G W W G
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALK-DNLV-VDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1630
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LG G + VP ++ L HVA G + +S+ G VY++G G+ LGH
Sbjct: 1631 DYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHG 1690
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ +V P+L+ SL+ + +VV++S+ + H A ++G +Y +G D
Sbjct: 1691 S--------DEHVRRPKLIESLRGM--KVVEVSVG-----SLHCIAAVDNGDVYTWGDND 1735
Query: 509 KGQLG 513
+GQ+G
Sbjct: 1736 EGQIG 1740
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQ 195
+A + R + +Q I G AVT G VY+ G ++SG+LG G T R + Q
Sbjct: 454 VASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQ 513
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
I+ + +G M ++ G VY++G G+ +G + L +P+ +E+ +
Sbjct: 514 PIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL--TPRKIETFPEKCIRD 571
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G+ +A + G +YT+ G RLGH ++P P+ L VVQ+A G
Sbjct: 572 ISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRD 630
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
L G+ VYS G G GKLG G P+ +E+ L+ Q VV + GA +
Sbjct: 631 AQTLCLTQDGL-VYSWGDGDFGKLGRGGSDGCCVPKPVER---LSGQDVVKIECGAQFSL 686
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ + G V TWG G Y LGHG+++ P+VV+ L + K + VA G V+E G V
Sbjct: 687 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 746
Query: 435 YSFG 438
+++G
Sbjct: 747 FAWG 750
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 165/355 (46%), Gaps = 34/355 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N QLG + P + LQ +++ Q G+ ++ G+VYA G+ +
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGEST 490
Query: 226 FGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
G G V V PQ ++ L G L+ +G VY++ G +
Sbjct: 491 SGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEE 544
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH + + + P + T + I+ G + A+ S +Y+ G G+ G+LG
Sbjct: 545 GKLGHGSRADALTPRKI-ETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYGRLG 600
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNE 398
HG+ P+ ++ L Q V VA G+ A + QDG V +WG G +G LG G
Sbjct: 601 HGNNHTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 658
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ VPK V+ L+ + + G + +S G V+++G G+ LGH + ++H
Sbjct: 659 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS------DQH 712
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ+V L++ +VV +++ H A+TE G+++A+G D GQ G
Sbjct: 713 --VRRPQVVEGLRE--HKVVDVAVG-----ALHCLAVTEGGQVFAWGDNDHGQQG 758
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G VYS+G G+LGHG+ + PR I + I + G+ +
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 581
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I +G +Y +G +G +G T L P+ V++L VVQ A G + T L+++
Sbjct: 582 IGSSGTLYTWGHGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQD 639
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY++ G+ +LG P P + L VV+I G + LAL+ G+ V+
Sbjct: 640 GLVYSWGDGDFGKLGRGGSDGCCVPKP-VERLSGQDVVKIECGAQFSLALS--RCGL-VW 695
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + P+++E L + V VA GA H V + G+V WG
Sbjct: 696 TWGKGDYFRLGHGSDQHVRRPQVVE--GLREHKVVDVAVGALHCLAVTEGGQVFAWGDND 753
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G+G P VQ L VK +A G
Sbjct: 754 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACG 785
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L L+P+ + G V +G+V G+G G LG G+ E ++P +++++ V
Sbjct: 1436 LAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1495
Query: 418 VAT--GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
V+ G +S +G+VYS+G G LGH GNR +++ P+++ SL+ +
Sbjct: 1496 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGH-------GNR-SSLDHPRIIESLR--GD 1545
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+V+++ S H+ A+ +G LY +G G G+LG E +Q
Sbjct: 1546 LIVKVATGGS-----HSAAINATGGLYTWGKGRYGRLGHEDSEDQ 1585
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H +AVT G V+++G N GQ G+G T +P ++ L+G++I + A G+ ++
Sbjct: 732 VGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIA 791
Query: 212 ISDAGQ 217
+D
Sbjct: 792 FADTSH 797
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4140
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4197
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4255
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4315
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4316 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4352
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4180
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4181 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4238
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4239 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4290
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4291 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4345
Query: 372 HAA 374
H+A
Sbjct: 4346 HSA 4348
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4158
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4159 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4205
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4206 GDYGKLGL---GNSTAKSSPQKIDV 4227
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4080
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4138
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4139 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4194
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4195 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4255 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4299
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4300 SNGDVYAWGSNSEGQLGLGHTNHVRE 4325
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 172/356 (48%), Gaps = 34/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E PR I + Q + G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
+ + + + + + PQL+ L++ ++Q + G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH TE V+ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 342 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 398
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P ++ L + A GD + ++ +G V++ G G LGH
Sbjct: 236 TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT A S GK+YAFG G GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLAFVPSRGKVYAFGLGSSGQLG 336
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 160/306 (52%), Gaps = 21/306 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ GSN QLGH + RP+ I LQ IIQ + G+
Sbjct: 44 QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +SD GQV ++G + G+ + + ++V P++V L + VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 321
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG AV+ G G+LG T+ +P ++ + L ++ A G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FAACGDEFSVFLTNEGG 270
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLG 330
Query: 441 ESASLG 446
S LG
Sbjct: 331 SSGQLG 336
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFAACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A V G+V
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSRGKVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ PR I +Q V + G H + G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQV--SCGHRHTLFLTATGK 60
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G Y LGH + P+++ L D I ++ G + +S+ G V S+G +
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH V P++V L V++ VVQI+ N+ H+ ALT G+L
Sbjct: 119 CGQLGH-------ATEKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
Y++G+ GQLG+ N+ T P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + AA G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A +
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLAFVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G+VY F G+ +LG + + + P ++G
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4141
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4198
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4256
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4317 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4353
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4181
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4182 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4239
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4240 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4291
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4292 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4346
Query: 372 HAA 374
H+A
Sbjct: 4347 HSA 4349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4159
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4160 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4206
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4207 GDYGKLGL---GNSTAKSSPQKIDV 4228
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4081
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4139
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4140 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4195
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4196 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4256 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4300
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4301 SNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4053
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4054 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4111
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4168
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4226
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4286
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4287 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4323
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4092 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4151
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4152 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4209
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4210 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4261
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4262 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4316
Query: 372 HAA 374
H+A
Sbjct: 4317 HSA 4319
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4012 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4072 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4129
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4130 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4176
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4177 GDYGKLGL---GNSTAKSSPQKIDV 4198
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4051
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4052 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4109
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4110 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4165
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4166 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4225
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4226 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4270
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4271 SNGDVYAWGSNSEGQLGLGHTNHVRE 4296
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4190
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4248
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4308
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4309 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4345
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4173
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4174 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4231
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4232 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4283
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4284 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4338
Query: 372 HAA 374
H+A
Sbjct: 4339 HSA 4341
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4151
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4152 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4198
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4199 GDYGKLGL---GNSTAKSSPQKIDV 4220
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4073
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4132 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4187
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4188 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4292
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4293 SNGDVYAWGSNSEGQLGLGHTNHVRE 4318
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 25/346 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G S + + VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG-------NSDRQRRPXQGEEVVQMSCGFKHSAV 4142
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4199
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4257
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4317
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4318 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4354
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 32/326 (9%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH +D + P G VVQ++ G+ +
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN--SDRQRRPXQGE----EVVQMSCGFKHS- 4140
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4141 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4196
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4197 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4256
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4257 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4301
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4302 SNGDVYAWGSNSEGQLGLGHTNHVRE 4327
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 125/279 (44%), Gaps = 44/279 (15%)
Query: 243 QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 292
QL E+ +N+ V AA G T V+ G V G+ RLG +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066
Query: 293 EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
++ L+ V Q+ G+ ++A SG V+S G G GKLGHG+ +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
+ P E+ V ++ G H+AVV DG++ T+G G YG LG GN + +P+ V
Sbjct: 4122 RRPXQGEEV-------VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4174
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
AL + VA G T VS DG V++FG G+ L G GN A +PQ
Sbjct: 4175 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL-------GLGNSTAKS-SPQK 4226
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+ L + + V S+ ALT+ G +Y FG
Sbjct: 4227 IDVLCGIGIKKVACGTQFSV-------ALTKDGHVYTFG 4258
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTA 4360
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTA 4360
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4083
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4084 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4141
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4198
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4256
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4317 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4353
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4181
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4182 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4239
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4240 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4291
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4292 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4346
Query: 372 HAA 374
H+A
Sbjct: 4347 HSA 4349
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4081
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4139
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4140 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4195
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4196 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4256 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4300
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4301 SNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4159
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4160 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4206
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4207 GDYGKLGL---GNSTAKSSPQKIDV 4228
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 196/430 (45%), Gaps = 34/430 (7%)
Query: 93 LSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--RENSQA 150
+S A+ M +R++ ++ ++ + G L L E CR + S+
Sbjct: 294 ISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRT 353
Query: 151 IAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
A P G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--G 411
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTA 264
T +IS G V A GK S+G G + E ++I V ++ G + T
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---E 528
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVW 584
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--A 642
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG G+ A L P+L+ L R+V IS+ +S H +L+ ++YA
Sbjct: 643 CLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEVYA 688
Query: 504 FGAGDKGQLG 513
+G GQ G
Sbjct: 689 WGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4322 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 372 HAA 374
H+A
Sbjct: 4352 HSA 4354
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4204
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4323 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4359
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4297
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4352
Query: 372 HAA 374
H+A
Sbjct: 4353 HSA 4355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201
Query: 378 QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4202 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4306
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 506
G GN +N P+ VT+L+ V L HT A++ G ++AFG
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4212
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4027
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4028 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4085
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4142
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4200
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4260
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4261 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4297
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4066 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4125
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4126 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4183
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4184 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4235
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4236 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4290
Query: 372 HAA 374
H+A
Sbjct: 4291 HSA 4293
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4025
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4026 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4083
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4084 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4139
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4140 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4199
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4200 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4244
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4245 SNGDVYAWGSNSEGQLGLGHTNHVRE 4270
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 3986 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4045
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4046 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4103
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4104 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4150
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4151 GDYGKLGL---GNSTAKSSPQKIDV 4172
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 178/378 (47%), Gaps = 37/378 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG--- 222
+ ++GS GQLG G+ EE+ +++LQ RI AG+ ++ I+D G+++ +G
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
+ + G K +P V++L ++ +VQAAIG + + +GR Y + +
Sbjct: 67 RATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 126
Query: 283 LGHHTEPNDVEPHPLLGTLE-------NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G E D PL +E + V Q+AAG + + L + V++
Sbjct: 127 CGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT----W 179
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G G P ++ + + L +A GA+H + +DG + WG YG LG
Sbjct: 180 GQPWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGT 235
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + S P VQ L+D+ + +A G + + ++++G+VY +G GE LG
Sbjct: 236 GDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD------ 289
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+ ++ + PQ V L E +VQ+S + H+ ALT G +++FG GD G+LG
Sbjct: 290 SDKSSKMVPQKVQLL--AGEDIVQVSCGGT-----HSVALTRDGHMFSFGRGDHGRLGY- 341
Query: 516 LVNNQTERGNPERVDIDL 533
+ G P V IDL
Sbjct: 342 --GRKVTTGQPMEVPIDL 357
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 37/316 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-----GTTEEEWRPRPIRSLQGIRIIQAAAG 205
+AG +S+A+ G ++++G N LGH + E P +++L ++I+QAA G
Sbjct: 44 VAGSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIG 103
Query: 206 AGRTMLISDAGQVYAFGKDSFG---EAEYGVQGT-----KLVTSPQLVESLKNIFVVQAA 257
+ + D G+ YA+G + +G E GT + + PQ + V Q A
Sbjct: 104 GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQ--RCAPKLVVRQVA 161
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 313
G + VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 AGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA-- 210
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
LA Q G +++ G G+LG G P ++ L L V +AAG WH+
Sbjct: 211 --FHNLALQEDG-TLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTL--VDIAAGGWHS 265
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 431
+ +G V WG G +G LG G+ + S VP+ VQ L + V+ G + ++ D
Sbjct: 266 TALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRD 325
Query: 432 GDVYSFGCGESASLGH 447
G ++SFG G+ LG+
Sbjct: 326 GHMFSFGRGDHGRLGY 341
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+ G ++++G+N GQLG G T+ +P ++ L + ++ AA
Sbjct: 201 ENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAA 260
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++D G+VY +G+ G +G PQ V+ L +VQ + G +
Sbjct: 261 GGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSV 320
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+G +++F G+ RLG+
Sbjct: 321 ALTRDGHMFSFGRGDHGRLGY 341
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 26/270 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 200
QA G H +AV +G Y++G N GQ G ++ RP+R + +
Sbjct: 99 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVR 158
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 159 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGA 210
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
F L +G ++ +WGN+ +LG +P + G L ++ +V IAAG + A
Sbjct: 211 FHNLALQEDGTLW--AWGNNEYGQLGTGDTQPRSQPIRVQG-LSDLTLVDIAAGGWHSTA 267
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 377
L + VY G G G+LG G +D+ + ++ QLL + +V V+ G H+ +
Sbjct: 268 LTDEGE---VYGWGRGEHGRLGFGD-SDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALT 323
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
+DG + ++G G +G LG+G + P V
Sbjct: 324 RDGHMFSFGRGDHGRLGYGRKVTTGQPMEV 353
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 196/430 (45%), Gaps = 34/430 (7%)
Query: 93 LSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--RENSQA 150
+S A+ M +R++ ++ ++ + G L L E CR + S+
Sbjct: 294 ISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRT 353
Query: 151 IAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
A P G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--G 411
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTA 264
T +IS G V A GK S+G G + E ++I V ++ G + T
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---E 528
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVW 584
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--A 642
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG G+ A L P+L+ L R+V IS+ +S H +L+ ++YA
Sbjct: 643 CLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEVYA 688
Query: 504 FGAGDKGQLG 513
+G GQ G
Sbjct: 689 WGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4099
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4100 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4157
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4214
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4272
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4333 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4369
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4197
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4198 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4255
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4256 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4307
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4308 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4362
Query: 372 HAA 374
H+A
Sbjct: 4363 HSA 4365
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4097
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4155
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4156 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4211
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4212 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4272 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4316
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4317 STGDVYAWGSNSEGQLGLGHTNHVRE 4342
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4175
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4176 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4222
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4223 GDYGKLGL---GNSTAKSSPQKVDV 4244
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 194/430 (45%), Gaps = 34/430 (7%)
Query: 93 LSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--RENSQA 150
+S A+ M +R++ ++ ++ + G L L E CR + S+
Sbjct: 294 ISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRT 353
Query: 151 IAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
A P G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--G 411
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTA 264
T +IS G V A GK S+G G + E ++I V ++ G + T
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---E 528
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVW 584
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACL 644
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
G G+ A L P+L+ L R+V IS+ +S H +L+ ++YA
Sbjct: 645 ---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEVYA 688
Query: 504 FGAGDKGQLG 513
+G GQ G
Sbjct: 689 WGNNSMGQCG 698
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALP 737
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 27/361 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G + V+ VY +GSNSS QL GT E+ +P+ + + I+A G T +IS
Sbjct: 373 GEAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQTIEA--GQYCTFVISS 430
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVY 273
G V A GK S+G G + E + I V ++ G + T + EG V+
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LGH P + G L+ VV ++AGY + A++ +Y+ G
Sbjct: 491 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS---EDGELYTWGE 547
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 392
G G+LGHG P L++ + V+ G+ H + +DGR V ++G G G
Sbjct: 548 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 603
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGHG+ PKVV+AL + V G ++ ++ G VY++GCG A LG
Sbjct: 604 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGC----- 656
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G+ A L P+L+ L RVV IS+ +S H AL+ ++YA+G GQ
Sbjct: 657 --GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEVYAWGNNSMGQC 707
Query: 513 G 513
G
Sbjct: 708 G 708
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 24/350 (6%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAA 203
++Q I AG + ++S G V + G S G+LG G + + + + I+ + ++
Sbjct: 414 DAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS 473
Query: 204 AGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNF 261
G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 474 KGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYR 531
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A +S +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL+
Sbjct: 532 HSAAVSEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIALS- 587
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
G V+S G G GKLGHG P+++E Q + ++ V AG+ + + G+
Sbjct: 588 -KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTSTGQ 644
Query: 382 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 645 VYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWG-- 700
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V L V + + ++S+ W A
Sbjct: 701 -NNSMGQC----GQGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLAWTA 745
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 579 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 638
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L VV +IG+ LS
Sbjct: 639 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELATTRVVDISIGDSHCLALSH 692
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P ++G L+ + + QI+AG + LA P
Sbjct: 693 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVVG-LDGVAIQQISAGTSHSLAWTALPR 748
Query: 325 GMAV 328
V
Sbjct: 749 DRQV 752
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 196/430 (45%), Gaps = 34/430 (7%)
Query: 93 LSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--RENSQA 150
+S A+ M +R++ ++ ++ + G L L E CR + S+
Sbjct: 294 ISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRT 353
Query: 151 IAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
A P G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--G 411
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTA 264
T +IS G V A GK S+G G + E ++I V ++ G + T
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---E 528
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVW 584
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--A 642
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG G+ A L P+L+ L R+V IS+ +S H +L+ ++YA
Sbjct: 643 CLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEVYA 688
Query: 504 FGAGDKGQLG 513
+G GQ G
Sbjct: 689 WGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4322 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 372 HAA 374
H+A
Sbjct: 4352 HSA 4354
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSV--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 196/430 (45%), Gaps = 34/430 (7%)
Query: 93 LSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--RENSQA 150
+S A+ M +R++ ++ ++ + G L L E CR + S+
Sbjct: 294 ISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRT 353
Query: 151 IAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
A P G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--G 411
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTA 264
T +IS G V A GK S+G G + E ++I V ++ G + T
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---E 528
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVW 584
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--A 642
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG G+ A L P+L+ L R+V IS+ +S H +L+ ++YA
Sbjct: 643 CLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEVYA 688
Query: 504 FGAGDKGQLG 513
+G GQ G
Sbjct: 689 WGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4322 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 372 HAA 374
H+A
Sbjct: 4352 HSA 4354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 196/430 (45%), Gaps = 34/430 (7%)
Query: 93 LSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCR--RENSQA 150
+S A+ M +R++ ++ ++ + G L L E CR + S+
Sbjct: 294 ISFDCFMAILMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRT 353
Query: 151 IAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
A P G + V+ VY +GSNSS QL GT E+ +P+ S + I+A G
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--G 411
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTA 264
T +IS G V A GK S+G G + E ++I V ++ G + T
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTL 471
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---E 528
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVW 584
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG A
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--A 642
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG G+ A L P+L+ L R+V IS+ +S H +L+ ++YA
Sbjct: 643 CLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEVYA 688
Query: 504 FGAGDKGQLG 513
+G GQ G
Sbjct: 689 WGNNSMGQCG 698
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4203
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4261
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4322 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4358
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4296
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4297 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4351
Query: 372 HAA 374
H+A
Sbjct: 4352 HSA 4354
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLSLSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 177/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG G G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCGACL---------GCGSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3731
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3732 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 3789
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 3846
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 3904
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P +VT L+ N R + +S W A
Sbjct: 3965 GLG---------HTNHVREPTVVTGLQGKNVRQISAGRCHSAAWTA 4001
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 3770 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3829
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 3830 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 3887
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 3888 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 3939
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P ++ Q N++ ++AG
Sbjct: 3940 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQ--ISAGRC 3994
Query: 372 HAA 374
H+A
Sbjct: 3995 HSA 3997
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3729
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 3730 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3787
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 3788 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 3843
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 3844 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 3903
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 3904 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 3948
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 3949 SNGDVYAWGSNSEGQLGLGHTNHVRE 3974
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 3690 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 3750 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 3807
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 3808 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 3854
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 3855 GDYGKLGL---GNSTAKSSPQKIDV 3876
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALP 737
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4089
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4090 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4147
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4204
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4262
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ V L V VA G T ++ +GDVY++G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4323 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4359
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4187
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4188 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4245
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P V P+L + + +A
Sbjct: 4246 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAV 4297
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4298 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 4352
Query: 372 HAA 374
H+A
Sbjct: 4353 HSA 4355
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4202 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ V L V V + HT AL
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 4306
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4212
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 153/305 (50%), Gaps = 13/305 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HSI + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 35 RSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 92
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +SD GQ++++G S G+ + V P+L++ L ++Q + GN+
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS-VAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 265 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ +G+ +T+ +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFPSQASPQR-VKSLEGIPLAQVAAGGAHSFALSL-- 208
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
SG AV+ G G+LG TD + P + +LL Q VV ++ G H AV+ + G V
Sbjct: 209 SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---KLLRTQKVVYISCGEEHTAVLTKSGGV 264
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGE 441
T+G G +G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 442 SASLG 446
LG
Sbjct: 325 RGQLG 329
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+VT PQ + + + + A G + L +G VYT +LGH E N E
Sbjct: 22 IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 78
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + ++ +A G + LAL+ Q ++S G G G+LGH + D PRLI++
Sbjct: 79 IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG R+G LG G E ++ P+ V++L +
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D Q H +L Q
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ--------- 243
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 244 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---NPRRV 289
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 92
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS +G+++++ G+D +LGH T + V L+ L ++Q++ G + +A
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ ++ + + L V AAG H+ +
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQV--AAGGAHSFALS 207
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 268 GAGSFGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 312
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 313 SSGLIYAFGCGARGQLG 329
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLGH TTE+ PR I+ L I+Q + G M
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++ G+ G + SPQ V+SL+ I + Q A G + LS G
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPS-QASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 266
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG + P ++ L+ +++ + G
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEE 253
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG SFG+ + ++ +P+ V L V Q A G T A +
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 311
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 312 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
W G G + + + P+ ++D VA G + + EDG+VY+ G
Sbjct: 7 WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQ 66
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH + +GN+ P+ + +L ++ ++ ++ S H+ AL++ G+L+++
Sbjct: 67 LGH----EREGNK------PEQIGAL--ADQHIIHVACGES-----HSLALSDQGQLFSW 109
Query: 505 GAGDKGQLG 513
GAG GQLG
Sbjct: 110 GAGSDGQLG 118
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 216/474 (45%), Gaps = 41/474 (8%)
Query: 50 LAASPSIVLHVLTACNLDPQDLAKLEAT--CSFFRQ-----PANFAPDYQLSISELAALD 102
L SP + V AC+L+ L T ++FR+ A D + + L +
Sbjct: 3846 LLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDE 3905
Query: 103 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 162
+ +K I + M + E D+ +C +K L + RR + ++ G
Sbjct: 3906 VAKK--IRELMADNENMDVLHECHDVFKREQDEQLV-QWMNRRPDDWTLSAGG------- 3955
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G +Y +G N GQLG + P P +L +R +Q G ++ G++YA G
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 280
+ G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY++ D
Sbjct: 4016 YGA--GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH P ++ +L I VV +AAG + AC + +++ G G G+LG
Sbjct: 4074 GKLGHGNRSPCDRPR-VIESLRGIEVVDVAAGGAHS---ACITAAGDLFTWGKGRYGRLG 4129
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
HG D+ P+L+E Q + + +G + D V +WG G YG LG G +
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQGNRHA 459
VP + +L + + V G + +++ G VY++ + LGH +
Sbjct: 4190 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGS--------DD 4241
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4242 HVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4288
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3013
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 3014 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3128
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3245
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3246 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3291
Query: 511 QLG 513
Q G
Sbjct: 3292 QQG 3294
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V+ P E L N+ VVQ A +LSR GRVYT ++ +D LG L+
Sbjct: 440 VSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+L + +V+IAA G+ Y LA +G V+S GCG GG+LGHG + P++I
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + ++Q A R +++S G+VY A+ D+ G PQLV
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+SL +NI + A LS G V+++ G+ RLGH EP L G
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ LK ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 173/365 (47%), Gaps = 19/365 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4102
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ IA G
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDIACGSGDAQ 4161
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P I+ L L V V G+ + +
Sbjct: 4162 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALT 4218
Query: 378 QDGRVCTWGWGR-YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G V TW R Y LGHG+++ P+ VQ L K I +ATG +EDG+VY+
Sbjct: 4219 KSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYT 4278
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 4279 WGDNDEGQLG-----DGTTN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA-- 4328
Query: 497 ESGKL 501
+GKL
Sbjct: 4329 NAGKL 4333
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 442 SASLGH 447
G+
Sbjct: 3290 HGQQGN 3295
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPK-LLEGLKGKKVIDVAAGSTHCLAL 725
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3227
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3228 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG +G G+G P +VQ L K VA G
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 23/252 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+++ G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKVRCGSQFSIALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ ++P+L+E + + + VAAG+ H + +D V +WG
Sbjct: 681 TWGKGDNQRLGHGTEEHVRYPKLLEGLK--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECE 401
N++C+
Sbjct: 736 ------SNDQCQ 741
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + I++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 257 AIGN 260
A G+
Sbjct: 3319 ACGS 3322
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 27/168 (16%)
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L NL V VA ++ ++GRV T + LG P++VQ+L +
Sbjct: 449 LANLGVVQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498
Query: 418 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 473
+A + + +S +G+V+S+GCG+ LGH + P+++++L KQ
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKMISALSGKQA 550
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
+ VV I+ ++ ++ A+T G+LY +G G+ G+LG +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 174/353 (49%), Gaps = 29/353 (8%)
Query: 167 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
YSFG NS G+L H T + P PI ++I+ A G +T + + G V+ G +
Sbjct: 14 YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73
Query: 227 GEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
G+ G+ T V S +LV +L ++I +++A G +SR G +YTF + + +LG
Sbjct: 74 GQC--GIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
H + N + + L + VV++A Y + + + + + +Y+ G G+LG
Sbjct: 132 HGST-NPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGT---LYAFGRNDLGQLGIDDG 187
Query: 345 TDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECES 402
D P + F N +PV+ VA G H V +G V +G +G LG G + +
Sbjct: 188 MDRHVPVPLTYF---NSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHA 244
Query: 403 VPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P ++ A L+ + +A G Y T ++E G VYSFG + LGH G+RH ++
Sbjct: 245 SPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGH-------GHRH-HL 296
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P L+ +L + + + +T Y HT L+E GK+Y FG + GQLG+
Sbjct: 297 SEPTLIKALAKTHA----VQVTCGCY---HTLVLSEDGKVYPFGRNNHGQLGL 342
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H A++ G +Y+FG NS GQLGHG+T P I+ L +++ A T+++
Sbjct: 106 GCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVM 165
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G +YAFG++ G + G+ P + + V+ A G T V G V
Sbjct: 166 TMEGTLYAFGRNDLG--QLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGV 223
Query: 273 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
F + +LG +T P L L+++ V +A GY + +ALA S VYS
Sbjct: 224 VAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGS---VYSF 280
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LGHG R P LI+ L V V G +H V+ +DG+V +G +G
Sbjct: 281 GRNDYGQLGHGHRHHLSEPTLIK--ALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHG 338
Query: 392 CLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
LG GN +C S P+++ +L D + VA+G Y + ++
Sbjct: 339 QLGLGNLIDCTS-PQIIASLRDKFVVKVASGFYHSICLT 376
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 152/320 (47%), Gaps = 18/320 (5%)
Query: 164 GVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
G V++ G N SGQ G G+T + R P + I I++A G IS +G +Y F
Sbjct: 63 GDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTF 122
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
G +S G+ +G T +T+P ++ L + VV+ A F T V++ EG +Y F +
Sbjct: 123 GFNSRGQLGHG--STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLG 180
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG + P PL + PV+ +A G + + + V + G G+LG
Sbjct: 181 QLGIDDGMDRHVPVPLT-YFNSRPVLAVACGQHHTVV---SLTNGGVVAFGKNDHGQLGT 236
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D + L +L +A G +H + + G V ++G YG LGHG+
Sbjct: 237 GYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHL 296
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S P +++AL A+ V G Y T V+SEDG VY FG LG + D
Sbjct: 297 SEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLID--------C 348
Query: 462 LTPQLVTSLKQVNERVVQIS 481
+PQ++ SL+ ++ VV+++
Sbjct: 349 TSPQIIASLR--DKFVVKVA 366
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+IA+ G VYSFG N GQLGHG P I++L +Q G T+++
Sbjct: 264 GYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVL 323
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S+ G+VY FG+++ G+ G+ TSPQ++ SL++ FVV+ A G + + L+
Sbjct: 324 SEDGKVYPFGRNNHGQ--LGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICLTATKN- 380
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV----------VQIAAGYCYLLALACQ 322
S G+ HT D LG L N P+ VQI A C ++A C+
Sbjct: 381 ---SVGSRMDTS-HTLCQD------LGKLVNNPMRSDLVFVLSGVQIHAHSCVVMA-RCE 429
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
P LGG++ GS ++ P
Sbjct: 430 PLEKM-------LGGRMIEGSLSEINIP 450
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
YS G G+L H D P I N++ + VA G A + + G V T G+
Sbjct: 14 YSFGQNSYGELCHNDTVDRTLPTPISFCH--NVKILDVACGNEQTAFLFETGDVFTCGYN 71
Query: 389 RYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G G+ ++V AL D+ I A G +S G +Y+FG LG
Sbjct: 72 DSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H G N + TP + L + VV+++ + Y+ HT +T G LYAFG
Sbjct: 132 H-----GSTNP---ITTPTKIKDLASYH--VVEVACS---YF--HTIVMTMEGTLYAFGR 176
Query: 507 GDKGQLGIE 515
D GQLGI+
Sbjct: 177 NDLGQLGID 185
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
+A + Q G H++ ++ G VY FG N+ GQLG G + P+ I SL+ +
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFV 362
Query: 200 IQAAAGAGRTMLIS 213
++ A+G ++ ++
Sbjct: 363 VKVASGFYHSICLT 376
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G + G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT AL SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324
Query: 391 GCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--VREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G YG LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHVREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA S ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSYGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ S G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S+G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G + G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT AL SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 267 GAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324
Query: 391 GCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V +S+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDVSIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT AL SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 51/343 (14%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-------------------------- 185
AG HS+A+ VV S+G GQLGHG E+
Sbjct: 23 AGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 186 ---------------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 230
+ P+PI++L G+RI Q A G + ++ G+V ++G++ G+
Sbjct: 83 YSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLG 142
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
G LV PQ +++ + + V A G TA ++ +G +Y + WG LG +
Sbjct: 143 LGTTEDSLV--PQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 200
Query: 291 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
+ P + T+E + +V++A G+ + ++++ S +Y+ G G+LGHG D P
Sbjct: 201 RLVPEK-VSTVEGVKMVKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFEDHLTP 256
Query: 351 RLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+E Q + + +G W H + DG++ WGW ++G +G G+ P V+
Sbjct: 257 HKLEALQENLISEI---SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 313
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
++ K +H++ G T V+E +V+S+G G + LGH D
Sbjct: 314 PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 356
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ QG+ + AAGA
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEH 172
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G++Y +G +G G + +LV P+ V +++ + +V+ A G T +S
Sbjct: 173 TAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSS 230
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L EN+ + +I+ G+ + +AL S +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENL-ISEISGGWRHTMALT---SDGKL 286
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G D P Q + + Q VV + W H V + V +WG
Sbjct: 287 YGWGWNKFGQVGVGDNVDHCSPV---QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 343
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LGHG ++PK+++ L+
Sbjct: 344 GTNGQLGHGESIDRNIPKMIEVLS 367
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 152/325 (46%), Gaps = 39/325 (12%)
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
P+R R++ +AGA ++ + V ++G+ G+ +G +L SP + +L
Sbjct: 14 PVR-----RVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALD 66
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
VV G T S E +SWG D P P+ L + + QI
Sbjct: 67 GHEVVSVTCGADHTTAYS-ESFTQVYSWGCDL----------FTPQPIK-ALHGLRIKQI 114
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G + LA+ V S G G+LG G+ D P+ I+ FQ ++++ +VAAG
Sbjct: 115 ACGDSHCLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAAG 169
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
A H A V +DG + WGWGRYG LG G+ VP+ V + VK + VA G T VS
Sbjct: 170 AEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVS 229
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
G +Y++G + LGH D LTP + +L++ + +IS W
Sbjct: 230 SSGGLYTYGWSKYGQLGHGDFEDH--------LTPHKLEALQE--NLISEISGG----WR 275
Query: 490 AHTFALTESGKLYAFGAGDKGQLGI 514
HT ALT GKLY +G GQ+G+
Sbjct: 276 -HTMALTSDGKLYGWGWNKFGQVGV 299
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT AL SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 166/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G YG LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA S ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSYGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ S G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S+G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT AL SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 27/332 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + + ++G+ G+ +G +LV P ++ +
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G + TA E +VY++ WG+ RLGH + P P+ L+ + + QIA G + L
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A+ V S G G+LG G+ D P+ I+ F+ + ++ ++AAGA H A V
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG + WGWGRYG LG G+ +P+ V ++ K + VA G T VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH D L P V +LK + + QIS W HT ALT
Sbjct: 247 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSTISQISGG----WR-HTMALTS 291
Query: 498 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
GKLY +G GQ+G V N + +P +V
Sbjct: 292 EGKLYGWGWNKFGQVG---VGNNDDHSSPGQV 320
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 139/296 (46%), Gaps = 9/296 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + V+ S+G GQLGHG E+ P + I GA T
Sbjct: 20 AGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D QVY++G FG +G + V +PQ V++L+ + + Q A G+ ++ G
Sbjct: 80 YSEDELQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAG 137
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + E++ V IAAG + A+ +Y
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQ-AFESVCVKMIAAGAEHTAAVTEDGD---LYG 193
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKM--VLVACGWRHTITVSDSGNLYTYGWSKY 251
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LGHG+ E VP V+AL D ++ G T ++ +G +Y +G + +G
Sbjct: 252 GQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 148 SQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQG++I Q A G
Sbjct: 68 TSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGD 127
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG+V ++G++ G+ G L+ PQ +++ +++ V A G TA +
Sbjct: 128 SHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQAFESVCVKMIAAGAEHTAAV 185
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + + P + ++E +V +A G+ + + ++ +
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEK-VSSVEGEKMVLVACGWRHTITVSDSGN-- 242
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + +G W H + +G++ W
Sbjct: 243 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI---SGGWRHTMALTSEGKLYGW 298
Query: 386 GWGRYGCLGHGNEECESVPKVV 407
GW ++G +G GN + S P V
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQV 320
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G + G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ R + I + A G ++ + + G+VY G ++ G+ + +G K P+ +
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIG 79
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS G+++++ G+D +LG T + V L+ L +
Sbjct: 80 ALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQ 362
+Q++ G + LALA ++ G G+LG G S+T + R +E L
Sbjct: 140 LQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-- 194
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G+
Sbjct: 195 ---VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIAC 301
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT AL SG +YAFG G KGQLG
Sbjct: 302 GRQ-----HTLALVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + + + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQF 356
+G L + ++ +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + VN++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A+V G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G + G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCG--QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 12/297 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG + A++ G VY++GS G+LGH E PR + +L+G I++ + G
Sbjct: 98 AGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAA 157
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREG 270
I G +Y +G+ A G GT+ V P+L++ L+ V+ + G TA ++ +G
Sbjct: 158 IDKDGHLYCWGR----AASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKG 213
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G + LGH + + +P + E VV +A G + + C+ +YS
Sbjct: 214 EVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEK--VVDVACGRDFTI-FVCES---GLYS 267
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G E+ + L VV ++AG +H +G+DG V TWG GR
Sbjct: 268 CGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGR 327
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LGHG + S+ K V L + + + VA G T V++DG +Y++G G LG
Sbjct: 328 EGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG 384
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 177/376 (47%), Gaps = 31/376 (8%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
A+ + ++ +FG N GQLG G RP P+ +L G RI+ AAG T IS G V
Sbjct: 53 ALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDV 112
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
Y +G +G+ + + + P+LVE+LK +V+ +IG A + ++G +Y WG
Sbjct: 113 YTWGSGEYGKLGHNDDSNENL--PRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYC--WG 168
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
A G + P + G LE V+ ++ G + A+ + V++ G G G+
Sbjct: 169 RAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGE---VWTWGNGYEGE 225
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
LGHG + + P+ + Q L + V VA G V + G + + G YG LG G
Sbjct: 226 LGHGEKNSQYQPK---KVQSLTEKVVDVACGRDFTIFVCESG-LYSCGADDYGQLGLGRS 281
Query: 399 ECE---SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
E P+ + + ++ GDY + DG VY++G G LGH AD
Sbjct: 282 HGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKAD--- 338
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI- 514
++ P V +L+ N +VQ++ HT A+T+ G LY +G G GQLG
Sbjct: 339 ---CSLAKP--VDNLR--NFEIVQVACG-----GGHTAAVTKDGVLYTWGRGRDGQLGRG 386
Query: 515 -ELVNNQTERGNPERV 529
EL + + R +P +V
Sbjct: 387 GELESIASYRTSPVQV 402
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+ A +G + + G L G+LG G P +E L + V VAAG A +
Sbjct: 49 MKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEA--LSGKRIVYVAAGDSCTAAI 106
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V TWG G YG LGH ++ E++P++V+AL + V+ G + +DG +Y
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYC 166
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G SA G G H V P+L+ + E+V+ +S S HT A+T
Sbjct: 167 WGRAASAGSG--------GTEH--VFIPRLIKGDLE-KEKVISVSCGRS-----HTAAVT 210
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
E G+++ +G G +G+LG N+Q + P++V
Sbjct: 211 EKGEVWTWGNGYEGELGHGEKNSQYQ---PKKV 240
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG + N L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+S G G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFSWGQNKYGQLGLGIDCN 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ L + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+++G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFSWGQNKYGQLGLGIDCNK-QASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+S+G N GQLG G +
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH + E +P PI +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPEPIGALAGQHIVHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQV+++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 TRGQLG 328
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G SFG+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH +E + EP +G L +V +A G + +AL+ Q V+S G G G+LG
Sbjct: 64 GQLGHESEGSKPEP---IGALAGQHIVHVACGESHSVALSDQGQ---VFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ ++ G WH + DG+ TWG YG LG G E
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 175 CPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 28/349 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + +G+K P+ + +L +V A G + LS +G+V+++ G+D +LG
Sbjct: 64 GQLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLT 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 345
T + V L+ L ++QI+ G + LALA ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ---FFTWGQNSYGQLGLGKECP 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+ ++ + L V AAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D R
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
L+ + V QI+ HT A SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 16/257 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G V+S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG ++ +LG E D E + L + VV I+ G + L SG V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 389 RYGCLGHG---NEECES 402
G LG G N +C S
Sbjct: 323 TRGQLGTGHTCNVKCPS 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 636 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 684
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +++IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 685 QGLASRNIIKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 740
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 741 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 800
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 801 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 852
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 853 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 887
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 684
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 685 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 744
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 745 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 801
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 802 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 861
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 862 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 911
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 912 AAGST-----HCLALTEDSEVHSWGSNDQCQ 937
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 756 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 815
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 816 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 873
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 874 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 921
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 703 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 762
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 763 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 820
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 821 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 876
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 931
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 868
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 869 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 927 VH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ ++D
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALNDK 102
Query: 216 GQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
GQVYA+G DS + + G+QG+ + + P+ ++SL +I +VQ A G + + LS+ V+
Sbjct: 103 GQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 332
+ +LG + L+ +L IP +Q+AAG + ++L L+ A++ G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG D P L++ L + + V + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGH + E P+ V L VA G +T+ V G +YSFG G + LG + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 452 D 452
+
Sbjct: 334 N 334
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ ++ + P+
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST--------SHEINPR 286
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
V L + V Q++ HT A SG++Y+FG G GQLG +N+
Sbjct: 287 KVFEL--MGSIVTQVACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 147/269 (54%), Gaps = 14/269 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQA 409
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 51 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 108
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 109 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 166
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 167 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 221
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 222 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 73 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 128
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 185
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 186 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 243
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 244 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 303
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 304 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 348
Query: 521 TERGN 525
T +GN
Sbjct: 349 TVKGN 353
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 93 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 152
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 153 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 211
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 212 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 268
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 269 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 323
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQ 408
R+ ++G G G LG G+ P V+
Sbjct: 324 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 351
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 203 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 262
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 263 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 320
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 321 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 353
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQ 408
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 170/352 (48%), Gaps = 23/352 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y +G N GQLG + P+ I +L IR +Q G ++ G+VYA
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA--T 3411
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
G+ GT VTS +++ESL+++ V + A+ G LS +G VY++ G+D
Sbjct: 3412 GYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDG 3471
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH N + ++ L V+ I+ G + AC +Y+ G G G+LGH
Sbjct: 3472 KLGHGNR-NSCDRPRVIEALRGKGVIDISCGGSHS---ACITQNHELYTWGKGRYGRLGH 3527
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+++E + + V +G + D V +WG G YG LG G +
Sbjct: 3528 GDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGC 3587
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P V++L + V G + ++ G VY++G G+ LGH +V
Sbjct: 3588 KIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGV--------DDHV 3639
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ ++V+ I+ T S+ H A T++G++Y +G D+GQLG
Sbjct: 3640 RRPKRVAALQ--GKKVITIA-TGSL----HCVASTDTGEVYTWGDNDEGQLG 3684
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 169/359 (47%), Gaps = 28/359 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML-ISDAGQVYAFGKD 224
V+ +G N QLG G + + + G +Q AG +T+ +S G+V+A G+
Sbjct: 2423 VFVWGLNDKDQLG-GLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGES 2481
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G G VT P+ +E+L + V + ++ G L+ EG+++++ G D +
Sbjct: 2482 TNGRLGLGPLSAN-VTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGK 2540
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH N P L+ T ++ V ++ G + A+ S +Y+ G G G+LGHG
Sbjct: 2541 LGHGNRMNCDHPK-LIDTFKSSCVRDMSCGSSHSAAIL---SSGELYTWGLGEYGRLGHG 2596
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
P+ ++ F + + + + DG V +WG G +G LG G E S
Sbjct: 2597 DNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCS 2656
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
VP V+ L VA G + +S G V+++G G+ LGH GN +V
Sbjct: 2657 VPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH-------GN-DTHVR 2708
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
PQ+V L+ +++V +++ H A+T+SG+++A+G D GQ G NN T
Sbjct: 2709 KPQIVDGLR--GKKIVDVAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG----NNTT 2756
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 132/264 (50%), Gaps = 22/264 (8%)
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQI 309
+ VV G F A L+REG VY++ G+ +LGH T P + EP + G L V++I
Sbjct: 18 VQVVTHTDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPRE-EPTLVTG-LAGKQVIRI 74
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
+ G + A+ + +Y+ G G G+LGHGS D+ P L+ + ++ V +G
Sbjct: 75 SCGSTHSAAVTSEGE---LYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSG 131
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H DG V +WG G YG LG G + PK ++ L + V G + ++
Sbjct: 132 DAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALT 191
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
DG V+++G GE LGH +V P+LV +L + VV +S+ +
Sbjct: 192 RDGSVWTWGKGEGFRLGHGT--------EDHVRHPKLVEALD--GKHVVDVSVG-----S 236
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
H ALT++G++Y +G D+GQLG
Sbjct: 237 IHCLALTDAGEVYCWGRNDQGQLG 260
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 28/349 (8%)
Query: 149 QAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQAAA 204
Q IAG ++ AV+ G V++ G +++G+LG G PR I +L +R + +
Sbjct: 2457 QQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHS 2516
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G M ++ G+++++G+ G+ +G + P+L+++ K+ V + G+ +A
Sbjct: 2517 GGRHAMALTIEGKLFSWGEGEDGKLGHGNRMN--CDHPKLIDTFKSSCVRDMSCGSSHSA 2574
Query: 265 VLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ G +YT+ G RLGH H +P V+ + + V+ IA G L
Sbjct: 2575 AILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQ------SFTSHRVIDIACGSRDAQTL 2628
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
A G V+S G G GKLG G P +E+ Q + VA GA + +
Sbjct: 2629 ALTDDG-TVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGV--CKVACGAQFSLALSTS 2685
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G V TWG G Y LGHGN+ P++V L K + VA G V++ G V+++G
Sbjct: 2686 GLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGD 2745
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ G+N NR PQLV L+ V ++SI W
Sbjct: 2746 NDHGQQGNNTTT---VNRR-----PQLVNGLEGQKITRVACGSSHSIAW 2786
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 162/343 (47%), Gaps = 16/343 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 206
Q + G AVT++G VY+ G G+LG G T+ + + SLQ +R + +G
Sbjct: 3391 QIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGG 3450
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
M +S G VY++G+ G+ +G + + P+++E+L+ V+ + G +A +
Sbjct: 3451 KHAMALSADGDVYSWGEGDDGKLGHGNRNS--CDRPRVIEALRGKGVIDISCGGSHSACI 3508
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
++ +YT+ G RLGH + + P ++ L V+ +A G L C
Sbjct: 3509 TQNHELYTWGKGRYGRLGHGDSEDQLLPK-VVEALRGNRVIDVACGSGDAQTL-CLTDDD 3566
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P +E L+ L V G+ + + + G V TWG
Sbjct: 3567 CVWSWGDGDYGKLGRGGSDGCKIPMKVE--SLIGLGVSKVECGSQFSVALTRSGAVYTWG 3624
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG ++ PK V AL K I +ATG ++ G+VY++G + LG
Sbjct: 3625 KGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG 3684
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
DG N A P+LVT+L+ V ++I W+
Sbjct: 3685 -----DGTTNAIAR---PRLVTALQGKKISRVACGSAHTIAWS 3719
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T +G VYS+GS G+LGHG T P + L G ++I+ + G+ + ++
Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G++Y +G+ ++G +G +LV P LV L+ ++ A G+ T + +G V+
Sbjct: 88 GELYTWGRGNYGRLGHGSSEDQLV--PVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 145
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LG P + L+ + V ++ G + LAL S V++ G
Sbjct: 146 SWGDGDYGKLGRGGSDGCKNPKS-IERLQGLGVCKVYCGAQFSLALTRDGS---VWTWGK 201
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G +LGHG+ +HP+L+E ++ V V+ G+ H + G V WG G L
Sbjct: 202 GEGFRLGHGTEDHVRHPKLVEALDGKHV--VDVSVGSIHCLALTDAGEVYCWGRNDQGQL 259
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G + + P +V L + +A G +F S
Sbjct: 260 GDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWS 295
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G HS AVTS+G +Y++G + G+LGHG++E++ P + L+G II A G+G T+
Sbjct: 77 GSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTL 136
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+D G V+++G +G + G G+ +P+ +E L+ + V + G F+ L+R+G
Sbjct: 137 AAADDGTVWSWGDGDYG--KLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDG 194
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ G RLGH TE + P L+ L+ VV ++ G + LAL VY
Sbjct: 195 SVWTWGKGEGFRLGHGTEDHVRHPK-LVEALDGKHVVDVSVGSIHCLALT---DAGEVYC 250
Query: 331 VGCGLGGKLG 340
G G+LG
Sbjct: 251 WGRNDQGQLG 260
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A G V+S+G G+LG G ++ P+ I LQG+ + + GA ++
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLA 189
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G V+ +GK +G + V P+LVE+L VV ++G+ L+ G
Sbjct: 190 LTRDGSVWTWGKGEGFRLGHGTEDH--VRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALAC 321
VY + + +LG + P P L+ L + +V IA G A +C
Sbjct: 248 VYCWGRNDQGQLGDID--CQIRPEPTLVSGLASKGIVGIACGPAQSFAWSC 296
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G S+A+T G VY++G +LGHG + RP+ + +LQG ++I A G+
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSL 3661
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +D G+VY +G + E + G T + P+LV +L+ + + A G+ T S
Sbjct: 3662 HCVASTDTGEVYTWGDND--EGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWS 3719
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 377 GQDG--RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
GQ+G +V WG LG VP + + + +K +A G T F VS DG V
Sbjct: 2416 GQEGQIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKV 2475
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
F CGES + G G G ANV P+ + +L R V + H A
Sbjct: 2476 --FACGESTN-GRL----GLGPLSANVTVPRQIENLSSFMVRKVSVHSGGR-----HAMA 2523
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
LT GKL+++G G+ G+LG N+ +P+ +D
Sbjct: 2524 LTIEGKLFSWGEGEDGKLGH---GNRMNCDHPKLID 2556
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +A T G VY++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 3659 GSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAW 3718
Query: 213 SDAGQVYA 220
S V A
Sbjct: 3719 STCKPVNA 3726
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 175/368 (47%), Gaps = 44/368 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV G V+++G N GQLG GT + P + L G+ I A G T
Sbjct: 264 AGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI--AEGRRHTFA 321
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + +G+ G + +L +P V L ++ + A G++ T + ++G
Sbjct: 322 VRQDGTVWAWGLNFWGQLGDGTRSDRL--TPVQVPDLTSVTAI--AAGDYHTLAVRQDGT 377
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T + + P + G V IAAG + +A+ + V+
Sbjct: 378 VW--AWGDNVWGQLGDGTYTDRLTPVQVPGL---TGVTAIAAGESHTVAMRQDGT---VW 429
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G + G+LG G+ TD P Q+ +L V +AAG +H V QDG VC WG+
Sbjct: 430 AWGDNVWGQLGDGTYTDRLTP-----VQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
YG LG G P +V L V +A GD T V +DG V+++G S LG
Sbjct: 485 AYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGD 544
Query: 448 NAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
A D R V P L VT++ +AHT A + G ++++G
Sbjct: 545 GATID----RRIPVQIPGLAGVTAIAAG---------------SAHTLAAGQDGAVWSWG 585
Query: 506 AGDKGQLG 513
A GQLG
Sbjct: 586 ANSYGQLG 593
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 174/381 (45%), Gaps = 44/381 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H+ AV+ G V+++G N GQLG GT + P + L G+ I AAG T
Sbjct: 114 AGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAI--AAGRRHTFA 171
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +++G+ G + +L +P V L + + A G++ T + ++G
Sbjct: 172 VRQDGTVWAWGDNAWGQLGDGTRTNRL--TPVQVPGLTGVTAI--AAGDYHTLAVRQDGT 227
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WGN+A +LG T + P + G V I+AG + +A+ + V+
Sbjct: 228 VW--AWGNNALGQLGDGTYTERLTPVQVPGL---TGVTAISAGESHTVAVRQDGT---VW 279
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G + G+LG G+RTD P Q+ L V +A G H V QDG V WG
Sbjct: 280 AWGDNVWGQLGDGTRTDRLTP-----VQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLN 334
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G P V L V AI A GDY T V +DG V+++G LG
Sbjct: 335 FWGQLGDGTRSDRLTPVQVPDLTSVTAI--AAGDYHTLAVRQDGTVWAWGDNVWGQLGDG 392
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
D LTP V L V S HT A+ + G ++A+G
Sbjct: 393 TYTD--------RLTPVQVPGLTGVTAIAAGES---------HTVAMRQDGTVWAWGDNV 435
Query: 509 KGQLGIELVNNQTERGNPERV 529
GQLG T+R P +V
Sbjct: 436 WGQLGD---GTYTDRLTPVQV 453
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 54/387 (13%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV G V+++G N+SGQLG G T + P I L G+ I AAG+ T+
Sbjct: 517 AGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAGVTAI--AAGSAHTLA 574
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
G V+++G +S+G+ G +L SP V L + + A G+ + L ++G
Sbjct: 575 AGQDGAVWSWGANSYGQLGDGTTTHRL--SPVQVPGLTGVSAM--AAGDAHSVALLQDGT 630
Query: 272 VYTF---SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
V + SWG +LG T + P H L G V +AAG + +AL +
Sbjct: 631 VSAWGRNSWG---QLGDGTTAARLTPVQVHGLTG------VTAVAAGSLHTVALRQDGT- 680
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
V++ G G+LG G+ T R + Q+ L V +AAG +H V QDG V
Sbjct: 681 --VWAWGYNDLGQLGDGTTT-----RRLAPVQVQGLTDVTAIAAGYFHTVAVRQDGTVWA 733
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG+ +G LG G+ S P VQ L V A+ A G T V +DG V+++G
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQELTGVSAL--AAGYAHTVAVKQDGTVWAWGNNSGTQ 791
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+ + D R+ TP V L V+ +LT + HT A++ G +A+
Sbjct: 792 LGNGSSTD----RY----TPVWVEGLTGVS------ALTAGRF---HTAAVSPEGFGWAW 834
Query: 505 GAGDKGQLGIELVNNQTERGNPERVDI 531
G + GQ+G + T P VD+
Sbjct: 835 GRNNFGQVG-----DGTTADRPRPVDV 856
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 162/365 (44%), Gaps = 41/365 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV G +++G+N+ GQLG GT + P + L G+ + AAG T
Sbjct: 14 AGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTAV--AAGRHHTFA 71
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + +G+ G + +P V L + + A G T +S++G
Sbjct: 72 VRQDGTVWAWGLNVWGQLGDGTHTERH--TPVQVPGLTGVTAI--AAGRRHTFAVSQDGT 127
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T + P L E V IAAG + A+ + V+
Sbjct: 128 VW--AWGDNDWGQLGDGTRADRHTPVQL---PELTGVTAIAAGRRHTFAVRQDGT---VW 179
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+RT+ P Q+ L V +AAG +H V QDG V WG
Sbjct: 180 AWGDNAWGQLGDGTRTNRLTP-----VQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNN 234
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LG G P V L V AI + G+ T V +DG V+++G LG
Sbjct: 235 ALGQLGDGTYTERLTPVQVPGLTGVTAI--SAGESHTVAVRQDGTVWAWGDNVWGQLGDG 292
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
D LTP V L V HTFA+ + G ++A+G
Sbjct: 293 TRTD--------RLTPVQVPGLSGVTAIAEG---------RRHTFAVRQDGTVWAWGLNF 335
Query: 509 KGQLG 513
GQLG
Sbjct: 336 WGQLG 340
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S AG HS+A+ G V ++G NS GQLG GTT P + L G+ + AAG+
Sbjct: 613 SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAV--AAGSL 670
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ + G V+A+G + G+ G +L +P V+ L ++ + A G F T +
Sbjct: 671 HTVALRQDGTVWAWGYNDLGQLGDGTTTRRL--APVQVQGLTDVTAI--AAGYFHTVAVR 726
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
++G V+ + + +LG + P + E V +AAGY + +A+ +
Sbjct: 727 QDGTVWAWGYNLWGQLGDGSSTARSTP---VQVQELTGVSALAAGYAHTVAVKQDGT--- 780
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G G +LG+GS TD P +E ++ + AG +H A V +G W W
Sbjct: 781 VWAWGNNSGTQLGNGSSTDRYTPVWVEGLTGVS----ALTAGRFHTAAVSPEG--FGWAW 834
Query: 388 GR--YGCLGHGNEECESVP 404
GR +G +G G P
Sbjct: 835 GRNNFGQVGDGTTADRPRP 853
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQ 408
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2943 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3002
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V
Sbjct: 3003 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3061
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G
Sbjct: 3062 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWG 3117
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3118 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3175
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3176 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS- 3234
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T+SG++YA+G D G
Sbjct: 3235 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHG 3280
Query: 511 QLG 513
Q G
Sbjct: 3281 QQG 3283
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G VYS+G G+LGHG RPR I SL+GI ++ AAG +
Sbjct: 3988 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4047
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4048 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4105
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P + +L + VV++ G + +AL SG AVY
Sbjct: 4106 DTVWSWGDGDYGKLGRGGSDGCKVPMK-IDSLTGLGVVKVECGSQFSVALT--KSG-AVY 4161
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHGS + PR ++ Q + + +A G+ H +DG V TWG
Sbjct: 4162 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4219
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 4220 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4259
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 21/280 (7%)
Query: 236 TKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 293
T+ V++P L+ES++++F+ + A+ G LS EG VY++ D +LGH
Sbjct: 3964 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR 4023
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
P ++ +L I VV +AAG + AC + +Y+ G G G+LGH D+ P+L+
Sbjct: 4024 PR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4079
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E Q + + +G + D V +WG G YG LG G + VP + +L +
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+ V G + +++ G VY++G G+ LGH + +V P+ V L+
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ-- 4189
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4190 GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4224
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 165/340 (48%), Gaps = 18/340 (5%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGK 223
+Y+ G + G+LG G TE P + S+Q + I + A +G + +S G+VY++G+
Sbjct: 3948 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4007
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
G+ +G + P+++ESL+ I VV A G +A ++ G +YT+ G RL
Sbjct: 4008 AEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4065
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + ++P L+ L+ VV IA G L C V+S G G GKLG G
Sbjct: 4066 GHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDDTVWSWGDGDYGKLGRGG 4123
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
K P I+ L L V V G+ + + + G V TWG G Y LGHG+++
Sbjct: 4124 SDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4181
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P+ VQ L K I +ATG +EDG+VY++G + LG DG N +
Sbjct: 4182 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-----DGTTN---AIQR 4233
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
P+LV +L+ V +++ W+ A +GKL A
Sbjct: 4234 PRLVAALQGKKVNRVACGSAHTLAWSTSKPA--SAGKLPA 4271
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 2986 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3045
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3046 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3102
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3103 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3161
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3162 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3217
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3218 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3277
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ QGN V P LV L+ V ++S+ W
Sbjct: 3278 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3318
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 3195 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3249
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3250 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3307
Query: 257 AIGN 260
A G+
Sbjct: 3308 ACGS 3311
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQ 408
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ VA G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQ 408
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ ++D
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDK 102
Query: 216 GQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
GQVYA+G DS + + G+QG+ + + P+ ++SL +I +VQ A G + + LS+ V+
Sbjct: 103 GQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVG 332
+ +LG E L+ +L IP +Q+AAG + ++L L+ A++ G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-----GAIFGWG 215
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG D P L++ L + + V + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGH + E P+ V L +A G +T+ V G +YSFG G + LG + +
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333
Query: 452 D 452
+
Sbjct: 334 N 334
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 174/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ ++ + P+
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST--------SHEINPR 286
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
V L + V QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 287 KVFEL--MGSIVTQIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 13/261 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQA 409
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVKG 343
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 27/386 (6%)
Query: 80 FFRQPANFAPDYQLSISELAALDMCQKRAIFKPMT-EAERQDLKQKCG-------GSWKL 131
+QP A + ++SI++LAAL +PM + E CG G+
Sbjct: 294 LMKQPPTSAVNLEMSIAKLAALKE-------QPMYGKCEASGELYSCGQNSYGELGTGDD 346
Query: 132 VLRFLLAGEACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEE-WRPR 189
+ R L + C ++ + + ++AV T++GVV + G N SGQ G G +E R
Sbjct: 347 IERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLR 406
Query: 190 PIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+++L Q ++ I A+ G + ++D G Y++G + G+ + TK + P+L+ES
Sbjct: 407 PVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATK-IHVPKLIES 465
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
LK+ + A++ +AV++ G +YTF + +LG + P L+ +LE V
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKSLEATEVS 524
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
+A G + + C +G +++ G G+LG K P L+ L N VA
Sbjct: 525 MVACGLYH--TIICTAAG-ELFTCGKNDYGQLGLAHNRQIKLPTLV---ALPNEMVSFVA 578
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
G +H+ VV GR ++G YG LG G++ ++VP VV ++ + + G Y T +
Sbjct: 579 CGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVL 638
Query: 428 VSEDGDVYSFGCGESASLGHNAIADG 453
+SE G VY FG LG+ AD
Sbjct: 639 LSEQGQVYVFGRNNKGQLGNRGSADA 664
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 24/354 (6%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
+ G +YS G NS G+LG G E + + I Q +G ++++ G V
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTC 385
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
G + G+ G + V + V++L++ + + A+ G L+ G Y++ + +
Sbjct: 386 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LGH + L+ +L++ + + Y + + +Y+ G G+L
Sbjct: 445 RGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVIT---DAGELYTFGMNDCGQL 501
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G + P+L++ + + +VA G +H + G + T G YG LG +
Sbjct: 502 GLDHTQHQSTPQLVKSLEATEVS--MVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNR 559
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+P +V N++ + VA G Y + VVS G +SFG + LG + H
Sbjct: 560 QIKLPTLVALPNEMVSF-VACGYYHSVVVSTGGRAFSFGRNDYGQLGIGS------KVHQ 612
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
NV P +V N R+V+ T Y HT L+E G++Y FG +KGQLG
Sbjct: 613 NV--PNVVA--LSSNTRMVRA--TCGCY---HTVLLSEQGQVYVFGRNNKGQLG 657
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 28/304 (9%)
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
+G++Y+ G++S+GE G + + + +I Q GN AVL+ EG V T
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIR--QVVSGNETLAVLTNEGVVLT 384
Query: 275 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ G H + + P+ L + V IAA +A +G+A YS G
Sbjct: 385 CGLNKSGQCGQGHFDERVMMLRPV-QALRSQRVKFIAASNGCEHMIALTDTGLA-YSWGY 442
Query: 334 GLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LGH + + H P+LIE + L V+ H+AV+ G + T+G G
Sbjct: 443 NDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYH--HSAVITDAGELYTFGMNDCGQ 500
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAI 450
LG + + +S P++V++L + VA G Y T + + G++++ G + LG HN
Sbjct: 501 LGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNR- 559
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+ P LV ++ +S Y+ H+ ++ G+ ++FG D G
Sbjct: 560 ---------QIKLPTLVALPNEM------VSFVACGYY--HSVVVSTGGRAFSFGRNDYG 602
Query: 511 QLGI 514
QLGI
Sbjct: 603 QLGI 606
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 51/209 (24%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS +T G +Y+FG N GQLG T+ + P+ ++SL+ + A G T++ + A
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAA 539
Query: 216 GQVYAFGKD----------------------------------------------SFGEA 229
G+++ GK+ SFG
Sbjct: 540 GELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRN 599
Query: 230 EYGVQG--TKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
+YG G +K+ + P +V N +V+A G + T +LS +G+VY F N +LG+
Sbjct: 600 DYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNR 659
Query: 287 TEPNDVEPHPLLGTLENIP--VVQIAAGY 313
+ + P PL E V +AAG+
Sbjct: 660 GSADALLPVPLKVRPEKNSRRCVDVAAGF 688
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
C+ SG +YS G G+LG G + + +++ VV +G AV+ +G
Sbjct: 324 CEASG-ELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVV--SGNETLAVLTNEG 380
Query: 381 RVCTWGWGRYGCLGHGN-EECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSF 437
V T G + G G G+ +E + + VQAL VK I + G +++ G YS+
Sbjct: 381 VVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSW 440
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH +A + P+L+ SLK +S H+ +T+
Sbjct: 441 GYNDRGQLGHENLA-------TKIHVPKLIESLKDKKLGFASVSY-------HHSAVITD 486
Query: 498 SGKLYAFGAGDKGQLGIELVNNQT 521
+G+LY FG D GQLG++ +Q+
Sbjct: 487 AGELYTFGMNDCGQLGLDHTQHQS 510
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ V++ G +SFG N GQLG G+ + P + R+++A G T+L+S+
Sbjct: 583 HSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQ 642
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGR 271
GQVY FG+++ G+ L+ P V KN V A G + T+++ R
Sbjct: 643 GQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKR 699
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 646
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 647 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 681
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 249
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 439 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 484
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 306
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 485 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 544
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 545 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 601
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 602 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 710
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQ 511
H ALTE +++++G+ D+ Q
Sbjct: 711 ----HCLALTEDSEVHSWGSNDQCQ 731
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 550 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 609
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 668 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 715
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 614
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 670
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 725
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 721 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 401 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 449
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 450 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 505
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 506 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 565
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 566 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 617
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 618 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 652
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 249
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 410 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 455
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 306
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 456 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 515
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 516 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 572
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 573 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 681
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQ 511
H ALTE +++++G+ D+ Q
Sbjct: 682 ----HCLALTEDSEVHSWGSNDQCQ 702
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 521 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 580
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 581 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 638
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 639 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 686
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 468 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 527
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 528 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 585
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 586 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 641
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 642 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 696
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 633
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 634 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 692 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 731
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 249
L + + Q A R +++S G+VY A+ D+ +PQLV+ L +
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLVQGLASR 493
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPV 306
NI + A L+ G VY++ G+ RLGH EP + G V
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 554 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 610
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 611 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 719
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQ 511
H ALTE +++++G+ D+ Q
Sbjct: 720 ----HCLALTEDSEVHSWGSNDQCQ 740
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 724
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 679
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 734
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 735 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4211 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4263
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4264 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 4321
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 4322 HCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPK-LVEHLHGMSVADIACGSAHSAAITA 4380
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4381 --SGQ-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4435
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++G
Sbjct: 4436 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK 4495
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG
Sbjct: 4496 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 4540
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4541 EVYTWGDNDEGQLG 4554
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ + S+ G V++ G ++G+LG G T P P+ ++ + +G
Sbjct: 3112 IAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGK 3171
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+ VE+L+ + A G+ +A +S
Sbjct: 3172 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRQVEALRAKKIRDVACGSSHSAAIS 3229
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 3230 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVVQVACGSRDAQTLALTEDG-A 3287
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3288 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3345
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ--- 3402
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
G GN N P LV L V V ++SI W + E +
Sbjct: 3403 ----QGSGNTFVNK-KPALVIGLDDVFVNRVACGSSHSIAWGLPNATMEEEKR 3450
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 166/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P +++ +R I A G+ ++S G+V+A G+
Sbjct: 3075 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEG 3134
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3135 TNGRLGLGV--TYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3192
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P + L + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 3193 LGHGNRTTLDKPRQV-EALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3248
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ P+L+ L + V VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3249 DNATQLKPKLVAA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3306
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
P ++ L+ + I + G + ++ G+V+++G G+ LGH G++H
Sbjct: 3307 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3358
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T+SG++YA+G D GQ G
Sbjct: 3359 VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3404
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 164/343 (47%), Gaps = 23/343 (6%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 215
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 4270 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4329
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G+V T+
Sbjct: 4330 GEVYAWGEGEDGKLGHGNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTW 4387
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 4388 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 4445
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
GKLG G K P IE L L + V G+ + + + G V TWG G + LGH
Sbjct: 4446 YGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4503
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + PK V AL K I +ATG S+ G+VY++G + LG + Q
Sbjct: 4504 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 4562
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
P+LV++L+ + +V+++ +AHT AL+ S
Sbjct: 4563 -------RPRLVSALQ--GKHIVKVTCG-----SAHTLALSTS 4591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 8/216 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3208 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRV 3267
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I V+Q
Sbjct: 3268 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVIQIE 3325
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3326 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3384
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
A+ SG VY+ G G+ G G+ K P L+
Sbjct: 3385 AVT--DSGQ-VYAWGDNDHGQQGSGNTFVNKKPALV 3417
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 37/320 (11%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFV 253
++ Q + +L+S G+++A+ + S EAE PQ +E + I +
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAW-RLSKPEAE-----------PQPLEEAGHETFISI 634
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 635 AGHCEGRHFMAIDSNHN-AYSWGAGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVFCGC 692
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y + C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 693 TYSAVITC---GGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHS 749
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +G V WG G YG LG+GN P +V++L V+ I G + +S +G
Sbjct: 750 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA--GSQYSVALSSEGQ 807
Query: 434 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
VY++ G++ LGH + QG P+LV+SL+ ++R+V +++ AH
Sbjct: 808 VYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDMAVG-----VAHC 853
Query: 493 FALTESGKLYAFGAGDKGQL 512
AL+ SG+++ +G D Q+
Sbjct: 854 LALSSSGEVFGWGRNDCQQV 873
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3323 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3382
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D+GQVYA+G + G+ G T + P LV L ++FV + A G+
Sbjct: 3383 CLAVTDSGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDDVFVNRVACGS 3432
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 744 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRIFAGSQYSVA 801
Query: 212 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+S GQVY +GK + G E VQG + P+LV SL++ +V A+G LS
Sbjct: 802 LSSEGQVYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDMAVGVAHCLALSS 858
Query: 269 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLL 298
G V F WG ND + P+ V PLL
Sbjct: 859 SGEV--FGWGRNDCQ---QVCPSSVSSEPLL 884
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 18/242 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+ S YS+G+ +LGHG T P I +L+ + G + +I+
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G + +G+ ++ +G + + P LV +L VV A+ G+ + L+ EG V+
Sbjct: 702 GNLLTWGRGTYARLGHGNSDDRCL--PTLVAALAEHTVVDVALGSGDAHSLALTSEGLVF 759
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 332
+ G+ +LG+ ++P +E++P VQ I AG Y +AL+ S VY+ G
Sbjct: 760 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRIFAGSQYSVALS---SEGQVYTWG 812
Query: 333 CG--LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
LG +L S PRL+ Q + + V +A G H + G V +GWGR
Sbjct: 813 KATCLGHQLVERSVQGCSVPRLVSSLQ--HKRIVDMAVGVAHCLALSSSGEV--FGWGRN 868
Query: 391 GC 392
C
Sbjct: 869 DC 870
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S +T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 691 GCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSL 750
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G V+A+G +G+ G L P LVESL + + A G+ ++ LS EG
Sbjct: 751 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRIFA--GSQYSVALSSEG 806
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 320
+VYT WG LGH V+ P L+ +L++ +V +A G + LAL+
Sbjct: 807 QVYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDMAVGVAHCLALS 857
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H + + +WG G LGHG+ +VP + AL V G + V++
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G++ ++G G A LGH GN L P LV +L + VV ++L + +AH
Sbjct: 702 GNLLTWGRGTYARLGH-------GNSDDRCL-PTLVAALAE--HTVVDVALGSG---DAH 748
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
+ ALT G ++A+G GD G+LG
Sbjct: 749 SLALTSEGLVFAWGDGDYGKLG 770
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+VS++G V++ G G
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ LG NV P + L Q + V + H ALT GK+
Sbjct: 3136 NGRLGLGVT--------YNVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3182
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P +V+
Sbjct: 3183 FSWGEGEDGKLG---HGNRTTLDKPRQVE 3208
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIECQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 3010
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G+VYA G+ + G G+ + V P+ + +L N V + A+ G L+ +G+V
Sbjct: 3011 EGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3069
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +Y+ G
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWG 3125
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3242
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3243 -------DVHVRKPQVVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3288
Query: 511 QLG 513
Q G
Sbjct: 3289 QQG 3291
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 249
L + I Q A R +++S G+VY A+ D+ G PQLV+ L +
Sbjct: 449 LANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLG--------------PQLVQGLASR 494
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 306
NI + A L+ G V+++ G+ RLGH EP L G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHV 554
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G Y A+ + +Y+ G G G+LGHGS D+ P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSC 611
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+G V ++G+V +WG G YG LG G + PK+++ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG VYS+G G++ LGH +V P+L+ L+ ++VV ++ ++
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVVDVAAGST- 720
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQ 511
H ALTE +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ + Q A +LSR GRVY ++ +D LG L+
Sbjct: 440 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDT-LGPQ----------LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA V+S GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKMISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ V +A G+ ++A + +G + TWG G YG LGHG+ E +++P +V L +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I V+ +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 12/297 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L ++ +
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3053
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 3112 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 3171 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3226
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3227 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWG 3283
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E++ P + L+G+++I + G+G +T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ VV +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVVDVAAGSTHCLAL 725
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGH + +PR I +L+ RI A G+ +
Sbjct: 3055 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y +G +G +G T+L P++V+ L V+Q A G + T L+ E
Sbjct: 3115 ITSSGELYTWGLGEYGRLGHGDNTTQL--KPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G V+++ G+ +LG P ++E L V QI G + LAL S
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE------RLNGQGVCQIECGAQFSLALT--KS 3224
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G+ V++ G G +LGHG+ + P+++E + + V VA GA H V G+V
Sbjct: 3225 GV-VWTWGKGDYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYA 3281
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG +G G+G P +VQ L K VA G
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G V+S+G G+LGHG T P+ I +L G + ++ A G+ +
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + V VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVVDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACGPAQSFAWS 778
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 38/260 (14%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRP-------RPIR--------------- 192
+++ G +Y +G N GQLG G + P RPI+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADG 4007
Query: 193 ---SLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
+LQG R+I A G+G +T+ ++D V+++G +G+ G G+ P ++S
Sbjct: 4008 KVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDS 4065
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + VV+ G+ F+ L++ G VYT+ G+ RLGH ++ + P + G L+ V+
Sbjct: 4066 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 4124
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + C G VY+ G G+LG G+ + PRL+ Q + V
Sbjct: 4125 AIATGSLH--CVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACG 4181
Query: 368 AG---AWHAAVVGQDGRVCT 384
+ AW + G++ T
Sbjct: 4182 SAHTLAWSTSKPANAGKLPT 4201
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 121/287 (42%), Gaps = 41/287 (14%)
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
+G +Y +G + G+ G++G K V P E+L + +Q G ++ +G+V
Sbjct: 3954 SGTIYGWGHNHRGQLG-GIEGAK-VKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEA 4011
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
L+ V+ IA G L C V+S G G
Sbjct: 4012 --------------------------LQGYRVIDIACGSGDAQTL-CLTDDDTVWSWGDG 4044
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GKLG G K P I+ L L V V G+ + + + G V TWG G Y LG
Sbjct: 4045 DYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4102
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HG+++ P+ VQ L K I +ATG +EDG+VY++G + LG DG
Sbjct: 4103 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-----DGT 4157
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
N + P+LV +L+ V +++ W+ A +GKL
Sbjct: 4158 TN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--NAGKL 4199
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ VV A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3257
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 257 AIGN 260
A G+
Sbjct: 3316 ACGS 3319
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ +T V+S+G G+LG G ++ P I SL G+ +++ G+ ++
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVA 4083
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ +G VY +GK + +G V P+ V+ L+ V+ A G+ + +G
Sbjct: 4084 LTKSGAVYTWGKGDYHRLGHG--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
VYT+ ++ +LG T N ++ L+ L+ + ++A G + LA
Sbjct: 4142 VYTWGDNDEGQLGDGTT-NAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S+A+T G VY++G +LGHG+ + RPR ++ LQG ++I A G+ +
Sbjct: 4077 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCC 4136
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ G+VY +G + E + G T + P+LV +L+ + + A G+ T S
Sbjct: 4137 TEDGEVYTWGDND--EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4189
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+E Q + + +G + D V +WG G YG LG G + VP + +L
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ + V G + +++ G VY++G G+ LGH + +V P+ V L+
Sbjct: 4069 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ- 4119
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 4120 -GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4154
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 404 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P++VQ L + +A + + ++ G+V+S+GCG+ LGH +
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 537
Query: 462 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
P+++++L KQ + VV I+ ++ ++ A+T G+LY +G G+ G+LG +
Sbjct: 538 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 591
Query: 520 QT 521
QT
Sbjct: 592 QT 593
>gi|242076268|ref|XP_002448070.1| hypothetical protein SORBIDRAFT_06g020480 [Sorghum bicolor]
gi|241939253|gb|EES12398.1| hypothetical protein SORBIDRAFT_06g020480 [Sorghum bicolor]
Length = 200
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 118/217 (54%), Gaps = 42/217 (19%)
Query: 1 MDATTS-GTPAIQYHNIPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLH 59
MDAT S + I++HNI ++ + P+ Q + PL A+PSI+LH
Sbjct: 1 MDATESKASVVIKFHNIVNETTSHF----CPSLQ-------------QIPLTANPSILLH 43
Query: 60 VLTACNLDPQDLAKLEAT--CS--------------FFRQPANFAPDYQLSISELAALDM 103
VL++ L+P+DLA LEA+ C+ FFR+ ANF PD LS+ +LAA D
Sbjct: 44 VLSSYGLEPKDLAALEASAICTTIYKIVFREKILSKFFRRRANFEPDATLSLPKLAAYDT 103
Query: 104 CQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLA---GEACCRRENSQAIAGPGHSIAV 160
C ++AIFKPM ++ + + W L + GE R SQ +AGPGHSIAV
Sbjct: 104 CCQKAIFKPMKHEGKKKREAEAAVRWLLEASPCVPDVIGEKNYHRGKSQVVAGPGHSIAV 163
Query: 161 TSKG-----VVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
T+KG ++ SFG NS GQLG G TE ++RP IR
Sbjct: 164 TAKGKGGRILIQSFGGNSLGQLGVGNTEAQFRPCLIR 200
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 646
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 647 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 681
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 478
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
+ L +NI + A L+ G VY++ G+ RLGH EP + G
Sbjct: 479 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 538
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 539 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 595
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 596 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 655
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 656 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 705
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 706 AAGST-----HCLALTEDSEVHSWGSNDQCQ 731
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 550 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 609
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 610 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 668 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 715
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 614
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 670
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 671 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 725
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 721 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 24/364 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S +V S+G GQLGHG E+ P + +L +I+ GA T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVA 81
Query: 212 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S++ +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSESRMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG + + P + E I + +AAG + A+ +Y
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAVTEDGD---LYG 195
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + +VA G H V G + T+GW +Y
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS--MVACGWRHTISVSYSGALYTYGWSKY 253
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP ++AL + ++ G T ++ DG +Y +G + +
Sbjct: 254 GQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQV----- 308
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G GN N+ V +++VVQ+S W HT A+TE ++A+G G G
Sbjct: 309 --GVGN---NLDQCSPVQVRIPDDQKVVQVSCG----WR-HTLAVTERNNVFAWGRGTNG 358
Query: 511 QLGI 514
QLGI
Sbjct: 359 QLGI 362
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 162/336 (48%), Gaps = 29/336 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R++ +AGA ++ + V ++G+ G+ +G +L SP + +L + +V
Sbjct: 16 RVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDDHQIVSVT 73
Query: 258 IGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
G T S E R VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSH 131
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A
Sbjct: 132 CLAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAA 186
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
V +DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALY 246
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G + LGH + D L P + +L N + QIS W HT AL
Sbjct: 247 TYGWSKYGQLGHGDLED--------HLVPHKLEALG--NSVISQISGG----WR-HTMAL 291
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
T GKLY +G GQ+G V N ++ +P +V I
Sbjct: 292 TSDGKLYGWGWNKFGQVG---VGNNLDQCSPVQVRI 324
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 10/264 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++ +GIRI AAGA
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSY 241
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH L L N + QI+ G+ + +AL S +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHKLE-ALGNSVISQISGGWRHTMALT---SDGKL 297
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
Y G G++G G+ D+ P Q ++ + Q VV + W H V + V WG
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPV---QVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354
Query: 388 GRYGCLGHGNEECESVPKVVQALN 411
G G LG G + PK+++AL+
Sbjct: 355 GTNGQLGIGESLDRNFPKIIEALS 378
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+I+V+ G +Y++G + GQLGHG E+ P + +L I Q + G
Sbjct: 227 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWR 286
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
TM ++ G++Y +G + FG+ GV SP V + VVQ + G T ++
Sbjct: 287 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVT 344
Query: 268 REGRVYTFSWGNDARLG 284
V+ + G + +LG
Sbjct: 345 ERNNVFAWGRGTNGQLG 361
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G H++A+TS G +Y +G N GQ+G G ++ P +R +++Q + G
Sbjct: 279 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWR 338
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
T+ +++ V+A+G+ + G + G+ + P+++E+L
Sbjct: 339 HTLAVTERNNVFAWGRGTNG--QLGIGESLDRNFPKIIEAL 377
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 171/362 (47%), Gaps = 12/362 (3%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 3809
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3810 KLYATGYGA--GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYS 3867
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L + VV IAAG + AC + +++ G G
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPR-VIESLRGVEVVDIAAGGAHS---ACITASGELFTWGKG 3923
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGHG D+ P+L++ Q + V +G + D V +WG G YG LG
Sbjct: 3924 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 3983
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + P + +L + I V G + +++ G VY++G G+ LGH + +
Sbjct: 3984 RGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4043
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIY---WNAHTFALTESGKLYAFGAGDKGQ 511
R L + V ++ + V + I W ++L G++Y +G D+GQ
Sbjct: 4044 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLG-LGEVYTWGDNDEGQ 4102
Query: 512 LG 513
LG
Sbjct: 4103 LG 4104
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G A T + V+ +G N QLG + P +L + ++Q A G+ ++
Sbjct: 2721 GLESAGTIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2780
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G++YA G+ + G G+ + + P+ + +L N V + A+ G L+ +G+V
Sbjct: 2781 EGKIYACGEATNGRLGLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 2839
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+++ G+D +LGH + N +P L+ L+ + IA G + A+ S +YS G
Sbjct: 2840 FSWGEGDDGKLGHFSRMNCDKPR-LIEALKAKRIRDIACGSSHSAAIT---SSGELYSWG 2895
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRY 390
G G+LGHG T + P+L++ LL + + VA G+ A + +G V +WG G +
Sbjct: 2896 LGEYGRLGHGDNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2953
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 2954 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT- 3012
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+V PQ+V L+ +++V +++ H A+T++G++YA+G D G
Sbjct: 3013 -------DVHVRKPQMVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHG 3058
Query: 511 QLG 513
Q G
Sbjct: 3059 QQG 3061
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 25/378 (6%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q + I
Sbjct: 3785 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3844
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A +G + +S G+VY++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 3845 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 3902
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ +A G
Sbjct: 3903 AGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPK-LVDALQGHRVIDVACGSGDAQ 3961
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L M V+S G G GKLG G K P I+ L L + V G+ + +
Sbjct: 3962 TLCLTDDDM-VWSWGDGDYGKLGRGGSDGCKTPMKID--SLTGLGVIKVECGSQFSVALT 4018
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV--- 434
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG +
Sbjct: 4019 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVF 4078
Query: 435 ------YSFGCGESASLGHN---AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+S G GE + G N + DG N + P+LV +L+ V ++
Sbjct: 4079 QWGLPRWSLGLGEVYTWGDNDEGQLGDGTTN---AIQRPRLVAALQGKKINRVACGSAHT 4135
Query: 486 IYWNAHTFALTESGKLYA 503
+ W+ T T +GKL A
Sbjct: 4136 LSWS--TSKPTNAGKLPA 4151
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 39/342 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 246
P +SL + + Q +++S +G VY Q K T +P L+
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 451
Query: 247 SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 300
SL + +V+ A G + A LS G V+++ G+ RLGH EP + G
Sbjct: 452 SLSSRKMVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGK 510
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ +Y+ G G G+LGHGS D+ P L+ + L
Sbjct: 511 QAGKHVVHIACGSTYSAAITVDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 567
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V ++G+V +WG G YG LG G + PK+V+ L D+ + V
Sbjct: 568 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 627
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VY++G G++ LGH +V P+L+ +L+ ++VV +
Sbjct: 628 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRFPKLLDTLQ--GKKVVDV 677
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
++ ++ H ALT+ G+++++G+ DK Q L +N+ +
Sbjct: 678 AVGST-----HCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQ 714
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 40/293 (13%)
Query: 231 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G+ G KL V P +SL ++ V Q +LS G VYT ++
Sbjct: 391 WGLLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNY---------- 440
Query: 288 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ + P L+ +L + +V++AA G Y LAL+ S V+S GCG GG+LGHG
Sbjct: 441 KSTTLAPM-LIHSLSSRKMVKLAAHPDGQHY-LALS---SNGEVFSWGCGDGGRLGHGDT 495
Query: 345 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
T + P +I F + V +A G+ ++A + DG + TWG G YG LGHG+ E ++
Sbjct: 496 TYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQT 555
Query: 403 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
P +V AL +K + VA +GD T V+E+G V+S+G G+ LG +DG
Sbjct: 556 TPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG------- 607
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP+LV L+ ++ +V++ + + ALT+ G++Y +G GD +LG
Sbjct: 608 CKTPKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 653
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G +Y++G + G+LGHG++E++ P + +L+G++++ A G+G +T+
Sbjct: 522 GSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ GQV+++G +G + G G+ +P+LVE L+++ +V+ G+ F+ L+++G
Sbjct: 582 AVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 639
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VYT+ G++ RLGH T+ + P LL TL+ VV +A G + LAL
Sbjct: 640 QVYTWGKGDNQRLGHGTDEHVRFPK-LLDTLQGKKVVDVAVGSTHCLAL 687
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 22/349 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQG--IRIIQA 202
N +AG S+ AVT +G +Y+ G ++G+LG G + PR I +L ++ +
Sbjct: 2764 NVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAV 2823
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+G M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2824 HSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKAKRIRDIACGSSH 2881
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A ++ G +Y++ G RLGH + P L+ L V+Q+A G LA
Sbjct: 2882 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVIQVACGSRDAQTLALT 2940
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2941 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2996
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V TWG G Y LGHG + P++V+ L K +HVA G V++ G VY++G +
Sbjct: 2997 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3056
Query: 442 SASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 489
QGN V P LV L+ V ++S+ W
Sbjct: 3057 HGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3096
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 18/282 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A++S G V+S+G G+LGHG T P I + G + ++ A G+ +
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAA 528
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + T+P LV +LK + VV A G+ T ++
Sbjct: 529 ITVDGELYTWGRGNYGRLGHGSSEDQ--TTPMLVTALKGLKVVDVACGSGDAQTLAVTEN 586
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ +V++ G + +AL VY
Sbjct: 587 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALT---KDGQVY 642
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P+L++ Q + V VA G+ H + DG V +WG
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTLQ--GKKVVDVAVGSTHCLALTDDGEVHSWGSND 700
Query: 390 YGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
L H + + PK + LN + ++ G +F S
Sbjct: 701 K--LQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWS 740
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ + LQ + I++ G+ ++
Sbjct: 575 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 634
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY +GK +G + V P+L+++L+ VV A+G+ L+ +G
Sbjct: 635 LTKDGQVYTWGKGDNQRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGE 692
Query: 272 VYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAG 312
V+ SWG++ +L H N +P L G L + +V I+ G
Sbjct: 693 VH--SWGSNDKLQHFDTLFSNKKQPKALPG-LNSKHIVGISCG 732
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L+G
Sbjct: 2973 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3027
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3028 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3085
Query: 257 AIGN 260
A G+
Sbjct: 3086 ACGS 3089
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 27/334 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ +AGA ++ + + +G+ G+ +G +LV P ++ +
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G + TA E +VY++ WG+ RLGH + P P+ L+ I + Q+A G + L
Sbjct: 74 GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A+ V S G G+LG G+ D P+ I+ F+ ++++ ++AAGA H A V
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG + WGWGRYG LG G+ VP+ V ++ K + VA G T VS G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LGH D L P V +LK + QIS W HT ALT
Sbjct: 248 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSSTSQISGG----WR-HTMALTS 292
Query: 498 SGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
GKLY +G GQ+G + + +P +V+
Sbjct: 293 DGKLYGWGWNKFGQVG---AGDNADHCSPAQVNF 323
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 9/302 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + V+ ++G GQLGHG E+ P I I GA T
Sbjct: 21 AGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTA 80
Query: 212 IS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S D QVY++G FG +G + V +PQ V++L+ I + Q A G+ ++ G
Sbjct: 81 YSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAG 138
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V ++ + +LG T + + P + E I V IAAG + A+ +Y
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISVKMIAAGAEHTAAVTEDGD---IYG 194
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G R D P + + + V+VA G H V G + T+GW +Y
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLVACGWRHTITVSSSGSLYTYGWSKY 252
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E VP V+AL D ++ G T ++ DG +Y +G + +G
Sbjct: 253 GQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312
Query: 451 AD 452
AD
Sbjct: 313 AD 314
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 11/276 (3%)
Query: 148 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ I G H+ A + + VYS+G G+LGHG + + + P+P+++LQGI+I Q A G
Sbjct: 69 TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGD 128
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ AG+V ++G++ G+ G L+ PQ +++ + I V A G TA +
Sbjct: 129 SHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTIQAFEGISVKMIAAGAEHTAAV 186
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +Y + WG LG + P + ++E +V +A G+ + + ++ S
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFVPEKV-SSVEGDKMVLVACGWRHTITVSSSGS-- 243
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTW 385
+Y+ G G+LGHG D P +E + + + +G W H + DG++ W
Sbjct: 244 -LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI---SGGWRHTMALTSDGKLYGW 299
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
GW ++G +G G+ P V + K VA G
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACG 335
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT G V S+G N +GQLG GTTE+ P+ I++ +GI + AAGA
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEH 182
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G +Y +G +G G + + V P+ V S++ +V A G T +S
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSS 240
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G +YT+ W +LGH + + PH + L++ QI+ G+ + +AL S +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKL 296
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
Y G G++G G D P Q Q V A W
Sbjct: 297 YGWGWNKFGQVGAGDNADHCSP---AQVNFPEEQKVAQVACGW 336
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 35/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG GT EE+ + +L+ + G+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK ++P LV+SL N+ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 286 HTEPN-DVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
EP+ D P+ + + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ S P VQ L+D+ + +A G + + ++ +G+VY +G GE LG N
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD------ND 286
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ + PQ V L E ++Q+S + H+ ALT G++++FG GD G+LG
Sbjct: 287 KSSKMLPQKVNLL--AGEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 32/311 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G +S+A+ G ++++G N G LGH T+ E P ++SL ++I+QAA G
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + D G+ YA+G + +G+ E G + + P+ + + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 318
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA + G +++ G G+LG G +P ++ L L V +AAG WH+ +
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 265
Query: 379 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 437 FGCGESASLGH 447
FG G+ LG+
Sbjct: 326 FGRGDHGRLGY 336
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 136/268 (50%), Gaps = 29/268 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--------LQGIRII 200
QA G H +AV +G Y++G N GQ G +++E RP+R Q + +
Sbjct: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDE-TGRPVRRDIVIPKRCAQQLTVR 153
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGA 205
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
F L +G ++ +WGN+ +LG T+P P P+ G L+++ +V IAAG +
Sbjct: 206 FHNLALKEDGTLW--AWGNNEYGQLGTGDTQPRSY-PIPVQG-LDDLTLVDIAAGGWHST 261
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 376
AL + VY G G G+LG G D+ L ++ LL + ++ V+ G H+ +
Sbjct: 262 ALTNEGE---VYGWGRGEHGRLGFGD-NDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVP 404
+DGR+ ++G G +G LG+G + P
Sbjct: 318 TRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G G LG G +E + + VV AL V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+LGH + TP LV SL V ++VQ ++ W H A+ + G+
Sbjct: 67 RGTLGHPPETKTES-------TPSLVKSLANV--KIVQAAIGG---W--HCLAVDDQGRA 112
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
YA+G + GQ G E ++T G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 177/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMAL 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKVV+AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDSX---- 676
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
AL ++YA+G GQ G
Sbjct: 677 -CLALRHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4205
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4263
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4324 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4360
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 177/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P+++E Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKV--CAGSQSSLALTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD + D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4246
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4298
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4299 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4353
Query: 372 HAA 374
H+A
Sbjct: 4354 HSA 4356
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ + +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLA 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ L
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSXCLALRH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 12/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS VT G +Y FGSN GQLG G T+ +P ++ L+ ++ + A G T++
Sbjct: 46 GDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVY 105
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S++G++++FG + G+ + + +L+ P+ +ES+ + + Q A G + + +LS +G V
Sbjct: 106 SESGKLFSFGCNEDGQLGHVDKENELL--PKEIESIPQMEIKQIACGTYHSIILSEDGDV 163
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
Y + N+ +LG E + P L E VV ++ GY Y AL + + Y+ G
Sbjct: 164 YVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGY-YHTALVTRDGFL--YTFG 217
Query: 333 CGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
GKLG S ++ P+ + N + + V+ GA H + + G WG G
Sbjct: 218 ENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQ 276
Query: 391 GCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LGHG + E + PK ++ L+ K I V+ G+ T VV+E G V++FG G LG
Sbjct: 277 GQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLG 333
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+I + G ++SFG N GQLGH E E P+ I S+ + I Q A G ++++
Sbjct: 98 GRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIIL 157
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S+ G VY +G ++ G+ G + + P+ ++ K VV + G + TA+++R+G +
Sbjct: 158 SEDGDVYVWGNNNEGQLGLGEEVENSL--PKKLKFKKE--VVSVSCGYYHTALVTRDGFL 213
Query: 273 YTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
YTF +LG + N P + +N + ++ G + +A+ Q Y+
Sbjct: 214 YTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQG---HCYA 270
Query: 331 VGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G G+LGHG++ E P+ I+ +L + + V+ G H AVV + G+V T+G GR
Sbjct: 271 WGDGSQGQLGHGTKLLEVNEPKQIK--KLSGQKCISVSCGESHTAVVTESGKVFTFGDGR 328
Query: 390 YGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+G LG G + + P + N ++V+ G T V++ + F GE++
Sbjct: 329 HGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDGENS 384
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 170/357 (47%), Gaps = 45/357 (12%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G V++FG + + W ++ +++ A G + +++++G++Y FG
Sbjct: 15 GAVFTFGK---SKFADNIANKFW-------IKNDGVVEMACGDEHSAVVTESGRLYVFGS 64
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ +G+ G+ TK + P V+ LK V + A G T V S G++++F D +L
Sbjct: 65 NDWGQ--LGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQL 122
Query: 284 GHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
GH + N++ P + E+IP + QIA G + + L+ VY G G+LG
Sbjct: 123 GHVDKENELLPKEI----ESIPQMEIKQIACGTYHSIILS---EDGDVYVWGNNNEGQLG 175
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G + P+ ++ + V V+ G +H A+V +DG + T+G G LG + +
Sbjct: 176 LGEEVENSLPKKLK----FKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQL 231
Query: 401 E--SVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+VP+ V A ND + I V+ G T +++ G Y++G G LGH G
Sbjct: 232 SNTTVPQSVAMPADND-EYISVSCGARHTVAITKQGHCYAWGDGSQGQLGH-------GT 283
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ V P+ + L ++ + +S S HT +TESGK++ FG G G+LG
Sbjct: 284 KLLEVNEPKQIKKLS--GQKCISVSCGES-----HTAVVTESGKVFTFGDGRHGKLG 333
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 44/308 (14%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I D G V+ FGK F + K +KN VV+ A G+ +AV++ GR
Sbjct: 11 IPDLGAVFTFGKSKFADN----IANKFW--------IKNDGVVEMACGDEHSAVVTESGR 58
Query: 272 VYTF---SWGNDARLGHH---TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+Y F WG LGH +P+ V+P L+ V ++A G + + + SG
Sbjct: 59 LYVFGSNDWG-QLGLGHTKSLNKPSFVKP------LKPEKVRKVACGRNHTIVYS--ESG 109
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++S GC G+LGH + +E P+ IE + ++ + A G +H+ ++ +DG V W
Sbjct: 110 -KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQI--ACGTYHSIILSEDGDVYVW 166
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G LG G E S+PK ++ +V + V+ G Y T +V+ DG +Y+FG E L
Sbjct: 167 GNNNEGQLGLGEEVENSLPKKLKFKKEV--VSVSCGYYHTALVTRDGFLYTFGENELGKL 224
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G ++ ++ +N PQ V ++ N+ + +S HT A+T+ G YA+G
Sbjct: 225 GLSS------SQLSNTTVPQSV-AMPADNDEYISVSC-----GARHTVAITKQGHCYAWG 272
Query: 506 AGDKGQLG 513
G +GQLG
Sbjct: 273 DGSQGQLG 280
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 15/163 (9%)
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
+ +F + N V +A G H+AVV + GR+ +G +G LG G+ + + P V+ L
Sbjct: 29 IANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK 88
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K VA G T V SE G ++SFGC E LGH D + N L P+ + S+
Sbjct: 89 PEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGH---VDKE-----NELLPKEIESIP 140
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
Q+ + QI+ Y H+ L+E G +Y +G ++GQLG+
Sbjct: 141 QM--EIKQIAC--GTY---HSIILSEDGDVYVWGNNNEGQLGL 176
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E+ + E Q G HSI ++ G VY +G+N+ GQLG G E P+ ++ + +
Sbjct: 137 ESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EV 194
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVE-SLKNIFVVQA 256
+ + G T L++ G +Y FG++ G + G+ ++L T PQ V N +
Sbjct: 195 VSVSCGYYHTALVTRDGFLYTFGENELG--KLGLSSSQLSNTTVPQSVAMPADNDEYISV 252
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ G T ++++G Y + G+ +LGH T+ +V + L + ++ G +
Sbjct: 253 SCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHT 312
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+ SG V++ G G GKLG G S ++ P + +F N+ V V+ G H
Sbjct: 313 AVVT--ESG-KVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNV--VYVSCGGCHTL 367
Query: 375 VV 376
V+
Sbjct: 368 VL 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
++N VV++A G + + SG +Y G G+LG G P ++ +
Sbjct: 35 IKNDGVVEMACGDEHSAVVT--ESGR-LYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK 91
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
++ V A G H V + G++ ++G G LGH ++E E +PK ++++ ++ +A
Sbjct: 92 VRKV--ACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIAC 149
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G Y + ++SEDGDVY +G LG G N L +L + + VV +
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLG-------LGEEVENSLPKKL-----KFKKEVVSV 197
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
S Y+ HT +T G LY FG + G+LG+
Sbjct: 198 SCG---YY--HTALVTRDGFLYTFGENELGKLGL 226
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 167/360 (46%), Gaps = 47/360 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTSPQL 244
PR + SL G + A GA ++ ++ AG+VYAFG D GE + T+L V P
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPE 257
Query: 245 VESLKNIF--VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN---------- 290
V + N V A G A ++ G + SWGN+ +LG +
Sbjct: 258 VTATTNAMPRVATVACGQRHCAAVTTSGVL--LSWGNEEFGQLGQGPPRDSSSKGDAKSL 315
Query: 291 -----DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
D P L ++ +A G + LAL V+S G G G LGHG R
Sbjct: 316 IRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGR---VFSFGRGAFGALGHGDRL 372
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ PRL++ L + +AAG H+A + GRV TWG G+YG LGH + + S P
Sbjct: 373 NCDVPRLVD--ALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPT 430
Query: 406 VVQALND--VKAIHVATGDYTTFVVSEDGD--VYSFGCGESASLGHNAIADGQGNRHANV 461
VQAL+D V+ +A G T ++ G + ++G G S G A AD V
Sbjct: 431 PVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATAD--------V 482
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
LTP ++ +E+V QIS + H+ A+TE G +Y +GA +GQLG EL + T
Sbjct: 483 LTPTIIDRALLGDEKVFQISAGSK-----HSVAVTEGGCVYTWGARTQGQLGHELGDAGT 537
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 22/261 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-----------------TTEEEWRPRPIRSLQ 195
G H AVT+ GV+ S+G+ GQLG G + PR + S
Sbjct: 274 GQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGH 333
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
++ A GAG T+ ++ G+V++FG+ +FG +G + V P+LV++L + V Q
Sbjct: 334 -VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV--PRLVDALWGVGVAQ 390
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYC 314
A G+ +A LS GRVYT+ G LGH N P P+ + + QIA G
Sbjct: 391 IAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGD 450
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+ LA+A SG+ + + G G G G G+ D P +I++ L + + ++AG+ H+
Sbjct: 451 HTLAIAGGGSGV-LLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSV 509
Query: 375 VVGQDGRVCTWGWGRYGCLGH 395
V + G V TWG G LGH
Sbjct: 510 AVTEGGCVYTWGARTQGQLGH 530
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 136/330 (41%), Gaps = 32/330 (9%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR------PRPIRSLQGI- 197
R+ + G HS+AVTS G VY+FG + SG+ + R P + +
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAVIDPPEVTATTNAMP 266
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV--------QGTKLVTS-------P 242
R+ A G ++ +G + ++G + FG+ G L+ P
Sbjct: 267 RVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP 326
Query: 243 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 302
+LV S ++ A G T L+ GRV++F G LGH N P L+ L
Sbjct: 327 RLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPR-LVDALW 384
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+ V QIAAG + +L+ SG VY+ G G G LGH + P ++ ++
Sbjct: 385 GVGVAQIAAGDNHSASLSA--SGR-VYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVR 441
Query: 363 PVVVAAGAWHAAVV--GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHV 418
+A G H + G G + WG G G G G P ++ L D K +
Sbjct: 442 CEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQI 501
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+ G + V+E G VY++G LGH
Sbjct: 502 SAGSKHSVAVTEGGCVYTWGARTQGQLGHE 531
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 41/258 (15%)
Query: 287 TEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG--CGLGGKLGHGS 343
+E + P P + +L+ V +A G + +A+ S VY+ G G G L +
Sbjct: 190 SEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVT---SAGEVYAFGDCSGEGKALSAPT 246
Query: 344 RTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----- 396
R E E N P V VA G H A V G + +WG +G LG G
Sbjct: 247 RLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDS 306
Query: 397 ------------NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+ +P++V + VK VA G T ++ +G V+SFG G +
Sbjct: 307 SSKGDAKSLIRRRADASMMPRLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGA 365
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G+R N P+LV +L V V QI+ ++ H+ +L+ SG++Y +
Sbjct: 366 LGH-------GDR-LNCDVPRLVDALWGVG--VAQIAAGDN-----HSASLSASGRVYTW 410
Query: 505 GAGDKGQLGIELVNNQTE 522
G G G LG V+N++
Sbjct: 411 GRGKYGALGHRDVDNRSR 428
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 171/357 (47%), Gaps = 31/357 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 280
+ + + + + + SP L+ L++ ++Q G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDC 124
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH T+ V+ ++ L VVQIA G + LAL S +YS G + G+LG
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 181
Query: 341 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 397
S D H + LL + +A G H+ ++ + G V +GWGR C LG +
Sbjct: 182 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLND 239
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
E S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 240 ETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF-------- 291
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT AL S G++YAFG G GQLG
Sbjct: 292 SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 341
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 158/309 (51%), Gaps = 22/309 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP---IRSLQGIRIIQAAAG 205
Q G H++ +T+ G VY+ GSN QLGH + R P I LQ IIQ G
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ ++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN +
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLA 162
Query: 266 LSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLA 318
L+ G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 163 LTSCGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 219
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
SG AV+ G G+LG T+ +P ++ + L ++ VA G + +
Sbjct: 220 ----KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTN 272
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 437
+G V T G G YG LGHG E +P++V L VA G+ +T +V G VY+F
Sbjct: 273 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAF 332
Query: 438 GCGESASLG 446
G G S LG
Sbjct: 333 GLGSSGQLG 341
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 99 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 158
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV +T P + +L I + A G +
Sbjct: 159 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 216
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 217 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 274
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 275 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 330
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 331 AFGLGSSGQLGTRSTKSLMLPQVV 354
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V Q+A G+ + L L VY+ G +LGH T K PR+ + LQ V
Sbjct: 42 VQQVACGHRHTLFLTATGK---VYACGSNDYSQLGHDLPT--KRPRMSPFLLIPELQDYV 96
Query: 366 V---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 421
+ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G
Sbjct: 97 IIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACG 156
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
+ + ++ G++YS+G LG N+ D H N P +T+L + I
Sbjct: 157 NNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT---HCNY--PLRLTTL-------LGIP 204
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
L H+F +++SG ++ +G + GQLG+ N++T R P ++
Sbjct: 205 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 249
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 207 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 266
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 267 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 324
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GRVY F G+ +LG + + + P ++G
Sbjct: 325 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 356
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ P I +Q V A G H + G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60
Query: 382 VCTWGWGRYGCLGHG---NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V G Y LGH S ++ L D I + G + +S+ G V S+G
Sbjct: 61 VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ LGH V P++V L V + VVQI+ N+ H+ ALT
Sbjct: 121 DNDCGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSC 166
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G+LY++G+ GQLG+ N+ T P R+
Sbjct: 167 GELYSWGSNIYGQLGVNSPNDLTHCNYPLRL 197
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 38/376 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG GT EE+ + +L+ + G+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK ++P LV+SL ++ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 286 HTEPN-DVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
EP+ D P+ + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 177 PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ S P VQ L+D+ + +A G + + ++ +G+VY +G GE LG N
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD------ND 286
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
++ + PQ V L E ++Q+S + H+ ALT G++++FG GD G+LG
Sbjct: 287 KSSKMLPQKVNLL--AGEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLGY--- 336
Query: 518 NNQTERGNPERVDIDL 533
+ G P + ID+
Sbjct: 337 GRKVTTGQPLELPIDI 352
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 32/311 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G +S+A+ G ++++G N G LGH T+ E P ++SL ++I+QAA G
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAPQLTVRQVAAGGTH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 318
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISIPVRVQG-LENVRLIAVGA----FHN 208
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA + G +++ G G+LG G P ++ L L V +AAG WH+ +
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTL--VDIAAGGWHSTALTN 265
Query: 379 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 437 FGCGESASLGH 447
FG G+ LG+
Sbjct: 326 FGRGDHGRLGY 336
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAA 255
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 1784 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 1836
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 1837 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 1894
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 1895 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA 1953
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 1954 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 2008
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + + V G + +++ G VY++G
Sbjct: 2009 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGK 2068
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG
Sbjct: 2069 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 2113
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 2114 EVYTWGDNDEGQLG 2127
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 176/380 (46%), Gaps = 31/380 (8%)
Query: 138 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 197
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 710 AGAGAVSTAHEEAGAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 765
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R I A G+ ++S G+VYA G+ + G GV T V P + L V + A
Sbjct: 766 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVA 823
Query: 258 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 824 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 882
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
A++ Q +Y+ G G G+LGHG + P+L+ L + V VA G+ A
Sbjct: 883 SAAISSQGE---LYTWGLGEYGRLGHGDNATQLKPKLVTA--LAGRRVVQVACGSRDAQT 937
Query: 376 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 938 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 997
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
V+++G G+ LGH G++H V PQ + L+ RV+ +++ H
Sbjct: 998 VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 1042
Query: 494 ALTESGKLYAFGAGDKGQLG 513
A+T++G++YA+G D GQ G
Sbjct: 1043 AVTDAGQVYAWGDNDHGQQG 1062
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 154/342 (45%), Gaps = 22/342 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 826 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 885
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 886 ISSQGELYTWGLGEYGRLGHGDNATQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 943
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 944 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 999
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 1057
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-----VSEDGDVYSFGCGESAS 444
+G G GN P +V L+ V VA G + S D + +
Sbjct: 1058 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASTDEE-------KRGP 1110
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+ + D G + + V +LKQ + + Q SL+ S+
Sbjct: 1111 VPFGSTRDPLGGSSLGIYEAETVQTLKQEAKPLNQSSLSESL 1152
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 162/343 (47%), Gaps = 23/343 (6%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTMLISDA 215
AVT G +++ G S G+LG G ++ P + SLQ + + + A +G + ++
Sbjct: 1843 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 1902
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A ++ G V T+
Sbjct: 1903 GEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 1960
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G RLGH + + P L+ L + IA G L C V+S G G
Sbjct: 1961 GKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGD 2018
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
GKLG G K P IE L L V V G+ + + + G V TWG G + LGH
Sbjct: 2019 YGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 2076
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + PK V AL K I +ATG S+ G+VY++G + LG + Q
Sbjct: 2077 GSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ- 2135
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 2136 -------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 2164
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 866 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRV 925
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 926 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 983
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 984 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 1042
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
A+ VY+ G G+ G G+ K P L+
Sbjct: 1043 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 1075
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 981 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 1040
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 1041 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 1090
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ G G
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 793
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 794 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 840
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 841 FSWGEGEDGKLGH---GNRTTLDKPRLVE 866
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+EG
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 F--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ + + G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE---FFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S G+ + +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKEGEFFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ +G + +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 181/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4133 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4185
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4186 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 4243
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 4244 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAIT- 4301
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
S V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4302 --SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4357
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++G
Sbjct: 4358 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK 4417
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A +++G
Sbjct: 4418 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAG 4462
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4463 EVYTWGDNDEGQLG 4476
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
I+G S+ + S+ G V++ G ++G+LG G T P P+ ++ + +G
Sbjct: 3065 ISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3124
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3125 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 3182
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P + L V+Q+A G LA G A
Sbjct: 3183 SQGELYTWGLGEYGRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDG-A 3240
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3298
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 3299 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3355
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
G GN N P LV L V V ++SI W +L E +
Sbjct: 3356 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNASLDEEKR 3403
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 167/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P +++ +R I + G+ ++S G+V+A G+
Sbjct: 3028 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEG 3087
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3088 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3145
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P L+ L + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 3146 LGHGNRTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3201
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ P+ + L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3202 DNATQLKPKQVTA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3259
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ P ++ L+ + I + G + ++ G+V+++G G+ LGH G++H
Sbjct: 3260 SATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3311
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3312 VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3357
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4183 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGG 4242
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A +
Sbjct: 4243 KHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAI 4300
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4301 TSSGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4358
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4359 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWG 4416
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4417 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4476
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4477 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4513
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3161 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRV 3220
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
IQ A G+ +T+ +++ G V+++G FG+ G G++ +P +E L I V+Q
Sbjct: 3221 IQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG--GSEGSATPHEIERLSGIGVIQIE 3278
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3279 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3337
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
A+ VY+ G G+ G G+ K P L+
Sbjct: 3338 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3370
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 26/286 (9%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
Y + K PQ +E L ++ A G F A+ S Y++ G D RLGH
Sbjct: 593 YNCRLGKPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRN-AYSWGAGEDHRLGHGD 651
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
P + + V Y + A SG +Y+ G G G+LGHG+ D+
Sbjct: 652 THARAVPTKISALDRCVKAVFCGCSY----SAAITWSG-NLYTWGRGTYGRLGHGNSDDQ 706
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
P ++ + V + +G H+ + +G V WG G YG LG+GN P +V
Sbjct: 707 CVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILV 766
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQL 466
+ L V+ I G ++ ++ +G +YS+ G+++ LGH + QG P+L
Sbjct: 767 ETLPRVQRIFA--GAQSSMALTTEGHLYSW--GKASCLGHQQVERSVQGCS-----VPRL 817
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
V+SL+ ++R+V +++ AH ALT G+++ +G D Q+
Sbjct: 818 VSSLQ--HKRLVDVAVG-----VAHCLALTSCGEVFGWGRNDSQQI 856
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G +Y++G + G+LGHG ++++ P + +L II A G+G ++
Sbjct: 674 GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSL 733
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G VYA+G +G+ G + L P LVE+L + + A G + L+ EG
Sbjct: 734 CLTSEGLVYAWGDGDYGKLGNGNCNSSL--QPILVETLPRVQRIFA--GAQSSMALTTEG 789
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 319
+Y SWG + LGH V+ P L+ +L++ +V +A G + LAL
Sbjct: 790 HLY--SWGKASCLGHQQVERSVQGCSVPR-LVSSLQHKRLVDVAVGVAHCLAL 839
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 185 EWRPRPIRSLQGIRIIQAAAGA-GRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSP 242
E P+PI L I+ A GR L D+ + Y++G +G + V +
Sbjct: 601 ELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTK 660
Query: 243 --QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
L +K +F G ++A ++ G +YT+ G RLGH + P ++
Sbjct: 661 ISALDRCVKAVFC-----GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP-AIVMA 714
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L ++ +A G +L G+ VY+ G G GKLG+G+ P L+E +
Sbjct: 715 LAEYEIIDVALGSGDAHSLCLTSEGL-VYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQ 773
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAI 416
+ AGA + + +G + + WG+ CLGH E SVP++V +L + +
Sbjct: 774 ----RIFAGAQSSMALTTEGHL--YSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLV 827
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
VA G ++ G+V+ +G +S + ++++
Sbjct: 828 DVAVGVAHCLALTSCGEVFGWGRNDSQQICPSSVS 862
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3276 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3335
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3336 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3385
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+ +TS+G+VY++G G+LG+G +P + +L R+ + AGA +M
Sbjct: 727 SGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLP--RVQRIFAGAQSSMA 784
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ G +Y++GK S + E VQG + P+LV SL++ +V A+G L+
Sbjct: 785 LTTEGHLYSWGKASCLGHQQVERSVQGCSV---PRLVSSLQHKRLVDVAVGVAHCLALTS 841
Query: 269 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLL 298
G V F WG ND++ P+ V PLL
Sbjct: 842 CGEV--FGWGRNDSQ---QICPSSVSCEPLL 867
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 17/238 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 214
H +A+ S YS+G+ +LGHG T P I +L R ++A G + I+
Sbjct: 626 HFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALD--RCVKAVFCGCSYSAAITW 683
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
+G +Y +G+ ++G +G + V P +V +L ++ A+ G+ + L+ EG V
Sbjct: 684 SGNLYTWGRGTYGRLGHGNSDDQCV--PAIVMALAEYEIIDVALGSGDAHSLCLTSEGLV 741
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 331
Y + G+ +LG+ + ++P +E +P VQ I AG +AL + +
Sbjct: 742 YAWGDGDYGKLGNGNCNSSLQPI----LVETLPRVQRIFAGAQSSMALTTEGHLYSWGKA 797
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
C LG + S PRL+ Q L V VA G H + G V +GWGR
Sbjct: 798 SC-LGHQQVERSVQGCSVPRLVSSLQHKRL--VDVAVGVAHCLALTSCGEV--FGWGR 850
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 271 RVYTFSWGNDARL--GHHTEPNDVEP-----HPLLGTLENIPVV----QIAAGYCYLLAL 319
RVY W + ++ G EP+ V P PLL + ++P++ Q+ C L
Sbjct: 526 RVYALGWPSLSKEQPGFSAEPSTVTPSWSSQDPLL--VGSLPLLNCRFQVKQIACSESLL 583
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+Y+ C LG E P+ IE+ + + H + +
Sbjct: 584 LLLSQDGKLYN--CRLG--------KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSN 633
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 438
+WG G LGHG+ +VP + AL+ VKA+ G + ++ G++Y++G
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDRCVKAVFC--GCSYSAAITWSGNLYTWG 691
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
G LGH GN + P +V +L + ++ ++L + +AH+ LT
Sbjct: 692 RGTYGRLGH-------GNSDDQCV-PAIVMALAEYE--IIDVALGSG---DAHSLCLTSE 738
Query: 499 GKLYAFGAGDKGQLG 513
G +YA+G GD G+LG
Sbjct: 739 GLVYAWGDGDYGKLG 753
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH++ G + F+VS+DG V++ G G
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 3089 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3135
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 3136 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3161
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 170/356 (47%), Gaps = 34/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
+ + + + + + P L+ L++ ++Q G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH T+ V+ ++ L VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 342 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 398
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT AL S G++YAFG G GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ IIQ G+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 321
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 441 ESASLG 446
S LG
Sbjct: 331 SSGQLG 336
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V Q+A G+ + L L VY+ G +LGH T K P LI + Q + +
Sbjct: 42 VQQVACGHRHTLFLTATGK---VYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 424
+ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G+
Sbjct: 95 ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ ++ G++YS+G LG N+ D H N P +T+L + I L
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDLT---HCNY--PLRLTTL-------LGIPLAA 202
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+F +++SG ++ +G + GQLG+ N++T R P ++
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 244
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ P I +Q V A G H + G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G Y LGH + P ++ L D I + G + +S+ G V S+G +
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH V P++V L V + VVQI+ N+ H+ ALT G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCGEL 164
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
Y++G+ GQLG+ N+ T P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 170/356 (47%), Gaps = 34/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
+ + + + + + P L+ L++ ++Q G+ + LS G+V SWG++
Sbjct: 67 NDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH T+ V+ ++ L VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 342 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 398
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT AL S G++YAFG G GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ IIQ G+
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 321
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 441 ESASLG 446
S LG
Sbjct: 331 SSGQLG 336
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V Q+A G+ + L L + VY+ G +LGH T K P LI + Q + +
Sbjct: 42 VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 424
+ G+ H+ + G+V +WG G LGH ++E +PKVV+ L + +A G+
Sbjct: 95 ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ ++ G++YS+G LG N+ D H N P +T+L + I L
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDL---THCNY--PLRLTTL-------LGIPLAA 202
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+F +++SG ++ +G + GQLG+ N++T R P ++
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 244
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ P I +Q V A G H + G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G Y LGH + P ++ L D I + G + +S+ G V S+G +
Sbjct: 61 VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH V P++V L V + VVQI+ N+ H+ ALT G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCGEL 164
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
Y++G+ GQLG+ N+ T P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 40/293 (13%)
Query: 231 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G+ G K V P E L N+ V Q A +LSR GRVYT ++ +D
Sbjct: 471 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT------ 524
Query: 288 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ P L+ L + +V+IAA G+ Y LALA VYS GCG GG+LGHG
Sbjct: 525 ----LAPQ-LVQGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDT 575
Query: 345 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+ P++I F + V +A G+ ++A + +G + TWG G YG LGHG+ E E+
Sbjct: 576 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 635
Query: 403 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+P +V L +K I VA +GD T V+++G V+S+G G+ LG +DG
Sbjct: 636 IPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGG-SDG------- 687
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP+L+ L+ ++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 688 CKTPKLIEKLQDLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 733
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 153/331 (46%), Gaps = 39/331 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
P L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 530
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 531 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 590
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 591 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 647
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V +G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 648 VIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 707
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 708 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 757
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 758 AAGST-----HCLALTEDSEVHSWGSNDQCQ 783
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G +T+
Sbjct: 602 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 661
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 662 AVTDNGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 719
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 720 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGSTHCLAL 767
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 549 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 608
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 609 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTDN 666
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 667 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALT---KDGQVY 722
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 723 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 777
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 778 ------SNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 820
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++AVT G V+S+G G+LG G ++ P+ I LQ + +++ G+ ++
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 714
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 715 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAG 312
V+ SWG++ + H +P P L L+ +V IA G
Sbjct: 773 VH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 812
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R IQ A
Sbjct: 4186 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLA 4238
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4239 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 4296
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ +G VY + G D +LGH + P LL L + V IA G + A+
Sbjct: 4297 HCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPK-LLEHLNGMSVADIACGSAHSAAITA 4355
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4356 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4410
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++G
Sbjct: 4411 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK 4470
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A +++G
Sbjct: 4471 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAG 4515
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4516 EVYTWGDNDEGQLG 4529
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 17/353 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ V S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3083 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3142
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3143 HALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3200
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3201 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALHGRRVIQVACGSRDAQTLALTEDG-A 3258
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3259 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3316
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 3317 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3373
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
G GN N P LV L V V ++S+ W +L E +
Sbjct: 3374 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSMAWGLPNASLDEEKR 3421
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 167/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P +++ +R I A G+ ++S G+VYA G+
Sbjct: 3046 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3105
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3106 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3163
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P L+ L + IA G + A++ Q +Y+ G G G+LGHG
Sbjct: 3164 LGHGNRSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3219
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ P+L+ + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3220 DNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3277
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ P ++ L+ + I + G + ++ G+V+++G G+ LGH G++H
Sbjct: 3278 SATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3329
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3330 VRKPQPIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3375
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4236 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGG 4295
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+L+E L + V A G+ +A +
Sbjct: 4296 KHCLALTTDGEVYAWGEGEDGKLGHGNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAI 4353
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4354 TASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4411
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4412 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWG 4469
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4470 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4529
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4530 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4566
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 34/282 (12%)
Query: 240 TSPQLV---ESLKNIFVVQAA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 294
T PQL+ E FV AA G F AV S Y++ G+ RLGH D
Sbjct: 602 TEPQLLDFAEIANETFVSIAAHCEGRHFLAVDSNHN-AYSWGVGDSRRLGH----GDCHA 656
Query: 295 HPLLGTLENIPVVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
L +E++ V ++ + YC Y A+ + + +Y+ G G G+LGHG+ D+ P
Sbjct: 657 RELPTKIESL-VRRVQSVYCGCSYSAAITLRGN---LYTWGRGTYGRLGHGNSDDQCMPA 712
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
++ + + V + +G H + + G V WG G YG LG+G+ P +++ L
Sbjct: 713 MVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLP 772
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSL 470
V+ V G + ++ +G +YS+ G+++ LGH + QG P+L+TSL
Sbjct: 773 RVQ--RVFAGSQFSLALTCEGQLYSW--GKASCLGHQLVERNVQGCS-----VPRLITSL 823
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+ ++R+V +++ AH AL+ +G+++ +G D Q+
Sbjct: 824 Q--HKRIVHVAVG-----VAHCLALSSNGEIFGWGRNDNQQI 858
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 14/187 (7%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E+ RR S G +S A+T +G +Y++G + G+LGHG ++++ P + +L+ ++
Sbjct: 664 ESLVRRVQS-VYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQV 722
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A G+G T+ ++ G VYA+G +G+ G + L P L+E L + V A
Sbjct: 723 LDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSL--QPLLIECLPRVQRVFA- 779
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 313
G+ F+ L+ EG++Y SWG + LGH +V+ P L+ +L++ +V +A G
Sbjct: 780 -GSQFSLALTCEGQLY--SWGKASCLGHQLVERNVQGCSVPR-LITSLQHKRIVHVAVGV 835
Query: 314 CYLLALA 320
+ LAL+
Sbjct: 836 AHCLALS 842
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 92 QLSISELAALDMCQKRAIF-----KPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRE 146
Q++ SE + +CQ+ ++ KP TE + D + + F+ C R
Sbjct: 575 QVACSEDMVVLLCQEGKLYNWPIAKPETEPQLLDFAEIANET------FVSIAAHCEGR- 627
Query: 147 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AG 205
H +AV S YS+G S +LGHG P I SL +R +Q+ G
Sbjct: 628 ---------HFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCG 676
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFT 263
+ I+ G +Y +G+ ++G +G + + P +V +LK+ V+ A+ G+ T
Sbjct: 677 CSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM--PAMVMALKDHQVLDVALGSGDAHT 734
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQ 322
L+R G VY + G+ +LG+ + + ++ PLL +E +P VQ + AG + LAL C+
Sbjct: 735 LCLTRGGLVYAWGDGDYGKLGNGSCNSSLQ--PLL--IECLPRVQRVFAGSQFSLALTCE 790
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ C LG +L + PRLI Q + + V VA G H + +G +
Sbjct: 791 GQLYSWGKASC-LGHQLVERNVQGCSVPRLITSLQ--HKRIVHVAVGVAHCLALSSNGEI 847
Query: 383 CTWGWGR 389
+GWGR
Sbjct: 848 --FGWGR 852
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3294 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3353
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3354 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3403
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 42/284 (14%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPN-------DV 292
P + L + + AA N + +L ++ RVY W + + G + EP
Sbjct: 502 PHPTQLLPSCLLRPAATPNTASTILEQQ-RVYALGWPALSKEQQGFNVEPALSWTSAATQ 560
Query: 293 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
+P P L T + + Q+A ++ L CQ + + + E P+L
Sbjct: 561 QPPPALLTCK-FQLKQVACSE-DMVVLLCQEGKLYNWPIA------------KPETEPQL 606
Query: 353 IEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
++ ++ N V +AA H V + +WG G LGHG+ +P +++L
Sbjct: 607 LDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL 666
Query: 411 NDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
V+ + V G + ++ G++Y++G G LGH GN + P +V +
Sbjct: 667 --VRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGH-------GNSDDQCM-PAMVMA 716
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
LK + +V+ ++L + +AHT LT G +YA+G GD G+LG
Sbjct: 717 LK--DHQVLDVALGSG---DAHTLCLTRGGLVYAWGDGDYGKLG 755
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIR 198
C + AG S+A+T +G +YS+G S LGH E + PR I SLQ R
Sbjct: 770 CLPRVQRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKR 827
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I+ A G + +S G+++ +G++ + + + + P L + ++ A
Sbjct: 828 IVHVAVGVAHCLALSSNGEIFGWGRNDNQQ----ICPASVCSEPLLRQPIQVTLPTMPAS 883
Query: 259 GNFFTAVLS 267
G TAV S
Sbjct: 884 GMACTAVQS 892
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 35/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG GT EE+ + +L+ + G+ ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK ++P LV+SL N+ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 286 HTEPNDVEP-HPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
EP+ E P+ + + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWT----WGQ 176
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ S P VQ L+D+ + +A G + + ++ +G+VY +G GE LG N
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD------ND 286
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ + PQ V L E ++Q+S + H+ ALT G++++FG GD G+LG
Sbjct: 287 KSSKMLPQKVNLLP--GEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 32/311 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G +S+A+ G ++++G N G LGH T+ E P ++SL ++I+QAA GA
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + D G+ YA+G + +G+ E G + + P+ + + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 318
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA + G +++ G G+LG G +P ++ L L V +AAG WH+ +
Sbjct: 209 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 265
Query: 379 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 437 FGCGESASLGH 447
FG G+ LG+
Sbjct: 326 FGRGDHGRLGY 336
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSV 315
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G G LG G +E + + VV AL V G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+LGH + TP LV SL V ++VQ ++ W H A+ + G+
Sbjct: 67 RGTLGHPPETKTES-------TPSLVKSLANV--KIVQAAIG---AW--HCLAVDDQGRA 112
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
YA+G + GQ G E ++T G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 172/364 (47%), Gaps = 30/364 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ----T 521
+VT + + + TF + SG++Y+FG G GQLG +N+ T
Sbjct: 295 IVTEIACGRQ-------------HTSTF-VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 522 ERGN 525
+GN
Sbjct: 341 VKGN 344
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H + V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSTFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-S 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4036 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4088
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4089 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 4146
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 4147 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA 4205
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4206 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4260
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + + V G + +++ G VY++G
Sbjct: 4261 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGK 4320
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG
Sbjct: 4321 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 4365
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4366 EVYTWGDNDEGQLG 4379
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 31/380 (8%)
Query: 138 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 197
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 2964 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 3019
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R I A G+ ++S G+VYA G+ + G GV T V P + L+ V + A
Sbjct: 3020 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLRQYVVKKVA 3077
Query: 258 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 3136
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
A++ Q +Y+ G G G+LGHG T + P+L+ L + V VA G+ A
Sbjct: 3137 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 3191
Query: 376 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 3251
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
V+++G G+ LGH G++H V PQ + L+ RV+ +++ H
Sbjct: 3252 VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 3296
Query: 494 ALTESGKLYAFGAGDKGQLG 513
A+T++G++YA+G D GQ G
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQG 3316
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4086 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGG 4145
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A +
Sbjct: 4146 KHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAI 4203
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4204 TASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4261
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L V V G+ + + + G V TWG
Sbjct: 4262 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4320 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4380 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4416
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3139
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 3140 ISSQGELYTWGLGEYGRLGHGDNTTQL--KPKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3253
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3254 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G GN P +V L+ V VA G
Sbjct: 3312 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3343
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3120 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRV 3179
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 3180 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 3237
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3296
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
A+ VY+ G G+ G G+ K P L+
Sbjct: 3297 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3329
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 255
+I Q A + +++S G++Y + + + EAE P +E + ++F+
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 619
Query: 256 AA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 620 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 677
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 678 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 734
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 792
Query: 434 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+Y++ G++ LGH + QG P+LV+SL+ ++R+V ++++ AH
Sbjct: 793 LYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 838
Query: 493 FALTESGKLYAFGAGDKGQL 512
AL+ SG+++ +G D Q+
Sbjct: 839 LALSSSGEVFGWGRNDSQQI 858
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQAAIGNFFTAVLSREGRV 272
++YA G S + + G ++ V +L F + Q A +LS+EG++
Sbjct: 534 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 593
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
YT+ + EP P+ ++ + AG+C S YS G
Sbjct: 594 YTWRLAKP----------EAEPLPMEEVAHDVFIS--IAGHCEGRHFLAIDSNHNAYSWG 641
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G +LGHG P I + +Q V G ++A + G + TWG G Y
Sbjct: 642 TGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LGHGN + S+P +V AL+D + VA +GD + ++ +G V+++G G+ LG+
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN--- 756
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
GN + + L P LV SL +V +RV S + AL+ G+LY +G
Sbjct: 757 ----GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSVALSSEGQLYTWGKATC- 801
Query: 511 QLGIELVNNQTE 522
LG +LV +
Sbjct: 802 -LGHQLVERSVQ 812
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3235 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3294
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3344
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 729 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 786
Query: 212 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+S GQ+Y +GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 843
Query: 269 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT 300
G V F WG ND++ P V PLL T
Sbjct: 844 SGEV--FGWGRNDSQ---QICPASVSSEPLLRT 871
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 791
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 320
++YT WG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 792 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 842
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+ S YS+G+ +LGHG T P I +L+ + G + I+
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G + +G+ ++ +G + + P LV +L + VV A+ G+ + L+ EG V+
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 332
+ G+ +LG+ ++P +E++P VQ + AG + +AL+ + + +
Sbjct: 745 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSVALSSE-GQLYTWGKA 799
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
LG +L S PRL+ Q + + V VA H + G V +GWGR
Sbjct: 800 TCLGHQLVERSVQGCSVPRLVSSLQ--HKRIVDVAVSVAHCLALSSSGEV--FGWGR 852
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L+Q + V + H ALT GK+
Sbjct: 3048 NGRL-------GLGVTH-NVPLPHQLPVLRQYVVKKVAVHSGGK-----HALALTLDGKV 3094
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 3095 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3120
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 204
+ AG S+A++S+G +Y++G + LGH E + PR + SLQ RI+ A
Sbjct: 776 RVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 833
Query: 205 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 245
+ +S +G+V+ +G+ DS V L+ +P LV
Sbjct: 834 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 875
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTEIACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4223 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4275
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4276 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAI--PTLLGSLQHVFVKKVAVNSGGK 4333
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 4334 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMNVADIACGSAHSAAITA 4392
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4393 --SGH-VLTWGKGRYGRLGHGDSEDQLRPQLVE--ALLGYRAIDIACGSGDAQTLCINDD 4447
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++G
Sbjct: 4448 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK 4507
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG
Sbjct: 4508 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 4552
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4553 EVYTWGDNDEGQLG 4566
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ + + G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3133 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3192
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L++ + A G+ +A +S
Sbjct: 3193 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAAIS 3250
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3251 SQGELYTWGLGEYGRLGHGDNSTQLKPK-LVAALAGRRVIQVACGSRDAQTLALTEDG-A 3308
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3309 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3366
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3423
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
G GN N P LV L V V ++SI W L E +
Sbjct: 3424 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNATLEEEKR 3471
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 169/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P +++ +R I A G+ ++ G+VYA G+
Sbjct: 3096 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEG 3155
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3156 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3213
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P L+ TL + + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 3214 LGHGNRTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3269
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ + P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3270 DNSTQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3327
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
P ++ L+ + I + G + ++ G+V+++G G+ LGH G++H
Sbjct: 3328 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3379
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3380 VRKPQPIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3425
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 163/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G + P + SLQ + + + A +G
Sbjct: 4273 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGG 4332
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A +
Sbjct: 4333 KHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAI 4390
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4391 TASGHVLTWGKGRYGRLGHGDSEDQLRPQ-LVEALLGYRAIDIACGSGDAQTL-CINDDD 4448
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4449 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWG 4506
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4507 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4566
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4567 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4603
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 52/361 (14%)
Query: 166 VYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQV 218
VY+ G S + HG E W P SL ++ Q +++S+ G++
Sbjct: 539 VYALGWPSLSKEQHGFNAEPALSWSSDP-SSLPLLNCKFQVQQIVCSESIVLILSEDGKL 597
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAV-LSREGRVYT 274
Y + + K T PQL+E + + +V A G F A+ ++R
Sbjct: 598 YNW------------RMFKPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNA---- 641
Query: 275 FSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+SWGN D RLGH P + TL + V + G Y A+ C + +Y+ G
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKI--TLLDRCVKAVFCGCSYSAAITCSGN---LYTWG 696
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G +LGHG+ D+ P ++ + V + +G H+ + +G V WG YG
Sbjct: 697 RGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGK 756
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG+GN P +V++L V+ V G + ++ DG +YS+ G+++ LGH +
Sbjct: 757 LGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMALTTDGQLYSW--GKASCLGHQLV-- 810
Query: 453 GQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
R A + P+L++ L+ ++R+V +++ AH AL+ G+++ +G D Q
Sbjct: 811 ---ERSAQWCSVPRLISGLQ--HKRIVDVAVG-----VAHCLALSSCGEVFGWGRNDSQQ 860
Query: 512 L 512
+
Sbjct: 861 I 861
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3344 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3403
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3404 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3453
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLL 317
G ++A ++ G +YT+ G ARLGH +D +P P ++ L ++ +A G
Sbjct: 679 GCSYSAAITCSGNLYTWGRGTYARLGHGN--SDDQPLPTVVMALTEHEIIDVALGSGDAH 736
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+L C S VY+ G GKLG+G+ P L+E + V AGA + +
Sbjct: 737 SL-CLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ----RVFAGAQFSMALT 791
Query: 378 QDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
DG++ + WG+ CLGH E SVP+++ L + + VA G +S G+
Sbjct: 792 TDGQL--YSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGE 849
Query: 434 VYSFGCGESASLGHNAIA 451
V+ +G +S + ++++
Sbjct: 850 VFGWGRNDSQQICPSSVS 867
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
E P+L+E+ + + H + + +WG G LGHG+ +VP
Sbjct: 606 ETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTK 665
Query: 407 VQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
+ L+ VKA V G + ++ G++Y++G G A LGH GN L P
Sbjct: 666 ITLLDRCVKA--VFCGCSYSAAITCSGNLYTWGRGTYARLGH-------GNSDDQPL-PT 715
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V +L + ++ ++L + +AH+ LT G +YA+G D G+LG
Sbjct: 716 VVMALTE--HEIIDVALGSG---DAHSLCLTSEGHVYAWGDADYGKLG 758
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+V ++G VY+ G G
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 3156
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 3157 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3203
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 3204 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3229
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G D+ G+ G+ GT + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
++ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 347 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 SQSAPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G ++ GQLG TEE + PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G + K ++PQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI +Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ A G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 173/370 (46%), Gaps = 42/370 (11%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE P RS ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCQ 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS-------------- 280
Query: 466 LVTSLKQVNERVVQISLTNSIYWNA-----HTFALT-ESGKLYAFGAGDKGQLGIELVNN 519
++N R V L SI A HT A SG++Y+FG G GQLG +N
Sbjct: 281 -----HEINPRKV-FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Query: 520 Q----TERGN 525
+ T +GN
Sbjct: 335 RKSPFTVKGN 344
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 146/268 (54%), Gaps = 14/268 (5%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAA 203
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 264 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ G + F WG + +LG + E + P+ LL +L + +V I G + AL
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDG 380
+ V++ G G G+LGH S + E +PR + F+L+ A G H +A V G
Sbjct: 260 EG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSG 314
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQ 408
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V QAA G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4082
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4083 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4140
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4197
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4255
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4316 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4352
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4180
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4181 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4238
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4239 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4290
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4291 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4345
Query: 372 HAA 374
H+A
Sbjct: 4346 HSA 4348
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4080
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4138
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4139 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4194
Query: 378 QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4195 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4255 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4299
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4300 STGDVYAWGSNSEGQLGLGHTNHVRE 4325
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4158
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 506
G GN +N P+ VT+L+ V L HT A++ G ++AFG
Sbjct: 4159 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4205
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4206 GDYGKLGL---GNSTAKSSPQKVDV 4227
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4032 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4084
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4085 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 4142
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 4143 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA 4201
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4202 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4256
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + + V G + +++ G VY++G
Sbjct: 4257 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGK 4316
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG
Sbjct: 4317 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 4361
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4362 EVYTWGDNDEGQLG 4375
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 174/371 (46%), Gaps = 31/371 (8%)
Query: 147 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ +A A P + T V +G N QLG + P +++ +R I A G+
Sbjct: 2970 HEEAGAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGS 3025
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTA 264
++S G+VYA G+ + G GV T V P + L V + A+ G
Sbjct: 3026 KSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3083
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
L+ +G+V+++ G D +LGH +P L+ L + +A G + A++ Q
Sbjct: 3084 ALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE 3142
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRV 382
+Y+ G G G+LGHG + P+L+ L + V VA G+ A + +DG V
Sbjct: 3143 ---LYTWGLGEYGRLGHGDNVTQLKPKLV--VALAGRRVVQVACGSRDAQTLALTEDGAV 3197
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WG G +G LG G E P ++ L+ + + + G + ++ G+V+++G G+
Sbjct: 3198 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3257
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH G++H V PQ + L+ RV+ +++ H A+T++G++Y
Sbjct: 3258 YRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVY 3302
Query: 503 AFGAGDKGQLG 513
A+G D GQ G
Sbjct: 3303 AWGDNDHGQQG 3313
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4082 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGG 4141
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A +
Sbjct: 4142 KHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAI 4199
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4200 TASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4257
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L V V G+ + + + G V TWG
Sbjct: 4258 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQFSVALTKSGAVYTWG 4315
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4316 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4375
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4376 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4412
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 154/342 (45%), Gaps = 22/342 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +PR + +L+ +I A G+ +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA 3136
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
IS G++Y +G +G +G T+L P+LV +L VVQ A G + T L+ +
Sbjct: 3137 ISSQGELYTWGLGEYGRLGHGDNVTQL--KPKLVVALAGRRVVQVACGSRDAQTLALTED 3194
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ G+ +LG PH + L I VVQI G + LAL V+
Sbjct: 3195 GAVFSWGDGDFGKLGRGGSEGSDTPHE-IERLSGIGVVQIECGAQFSLALT---RAGEVW 3250
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG + P+ I + + + VA GA H V G+V WG
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDND 3308
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-----VSEDGDVYSFGCGESAS 444
+G G GN P +V L+ V VA G + S D + +
Sbjct: 3309 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEE-------KRGP 3361
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+ + D G + + V +LKQ + + Q SL+ S+
Sbjct: 3362 VPFGSTRDPLGGSSLGIYEAETVQTLKQEAKPLNQSSLSESL 3403
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 3117 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRV 3176
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 3177 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 3234
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 3235 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 3293
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
A+ VY+ G G+ G G+ K P L+
Sbjct: 3294 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3326
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 37/320 (11%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I Q A + +++S G++Y + + + EAE P +E + + +
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHEVFISI 616
Query: 257 A---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 617 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 674
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 675 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 731
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 732 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSLALSSEGQ 789
Query: 434 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+YS+ G++ LGH + QG P+LV+SL+ ++R+V ++++ AH
Sbjct: 790 LYSW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 835
Query: 493 FALTESGKLYAFGAGDKGQL 512
AL+ SG+++ +G D Q+
Sbjct: 836 LALSSSGEVFGWGRNDSQQI 855
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQAAIGNFFTAVLSREGRV 272
++YA G S + + G ++ V +L F + Q A +LS+EG++
Sbjct: 531 RIYALGWPSLSKDQQGFSAEPTLSWSGESTAVPTLSCRFQIKQVACCETQMLILSQEGKL 590
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
YT+ + EP P+ + + AG+C S YS G
Sbjct: 591 YTWRLAKP----------EAEPLPMEEVAHEVFIS--IAGHCEGRHFLAIDSNHNAYSWG 638
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G +LGHG P I + +Q V G ++A + G + TWG G Y
Sbjct: 639 TGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAITCGGNLLTWGRGTYAR 696
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LGHGN + S+P +V AL+D + VA +GD + ++ +G V+++G G+ LG+
Sbjct: 697 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN--- 753
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
GN + + L P LV SL +V +RV S + AL+ G+LY++G
Sbjct: 754 ----GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSLALSSEGQLYSWGKATC- 798
Query: 511 QLGIELVNNQTE 522
LG +LV +
Sbjct: 799 -LGHQLVERSVQ 809
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3232 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 3291
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3292 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 726 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSLA 783
Query: 212 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+S GQ+Y++GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 784 LSSEGQLYSWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 840
Query: 269 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT 300
G V F WG ND++ P V PLL T
Sbjct: 841 SGEV--FGWGRNDSQ---QICPASVSSEPLLRT 868
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 673 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 732
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 733 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSLALSSEG 788
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 320
++Y SWG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 789 QLY--SWGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 839
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+ S YS+G+ +LGHG T P I +L+ + G + I+
Sbjct: 624 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 683
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G + +G+ ++ +G + + P LV +L + VV A+ G+ + L+ EG V+
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 741
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 332
+ G+ +LG+ ++P +E++P VQ + AG + LAL+ + +
Sbjct: 742 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSLALSSEGQLYSWGKAT 797
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
C LG +L S PRL+ Q + + V VA H + G V +GWGR
Sbjct: 798 C-LGHQLVERSVQGCSVPRLVSSLQ--HKRIVDVAVSVAHCLALSSSGEV--FGWGR 849
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ G G
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3044
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 3045 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3091
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 3092 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3117
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 204
+ AG S+A++S+G +YS+G + LGH E + PR + SLQ RI+ A
Sbjct: 773 RVFAGSQFSLALSSEGQLYSWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 830
Query: 205 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 245
+ +S +G+V+ +G+ DS V L+ +P LV
Sbjct: 831 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 872
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4075
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4076 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4133
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 4190
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 4248
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 4309 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 4345
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4173
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4174 GQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4231
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 4232 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 4283
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 4284 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 4338
Query: 372 HAA 374
H+A
Sbjct: 4339 HSA 4341
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4073
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4132 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4187
Query: 378 QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 4188 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4292
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVRE 4318
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4151
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 506
G GN +N P+ VT+L+ V L HT A++ G ++AFG
Sbjct: 4152 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4198
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 4199 GDYGKLGL---GNSTAKSSPQKVDV 4220
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + QI+AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQISAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G D+ G+ G+ GT + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
++ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 347 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 SQSAPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G ++ GQLG TEE + PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G + K ++PQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI +Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 36/363 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++GSN+SGQLG GTT P ++ L G ++ +AGA ++
Sbjct: 341 AGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQGLSG--VVAVSAGASSSLA 398
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G V+A+G ++ G+ G +LV P V+ L + V A G F+ + +G
Sbjct: 399 IRSDGTVWAWGSNASGQLGDGTTTDRLV--PVQVQGLSGVVAVVA--GTSFSLAVRNDGT 454
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T + P + G VV +AAG + LA+ + V+++
Sbjct: 455 VWGWGYNGYGQLGTFTSLFVLVPVQVTGL---SGVVAVAAGNLHSLAVRSDGT---VWAL 508
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS T+ P Q+ L VV VAAG H+ V DG V WG+ +
Sbjct: 509 GRNDNGQLGDGSWTNRSAP-----VQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSF 563
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G+ S P V L+ ++ A+ DY + V DG V+++G L
Sbjct: 564 GQLGDGSWFQRSAPVQVTGLSGRGSV-AASSDY-SMAVRYDGTVWAWGFNLYGQL----- 616
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G G +N L P V L+ VV + + +S H+ AL G ++ +G G
Sbjct: 617 --GDGTTSSNQLVPVQVQQLRG----VVAVEVGSS-----HSLALRSDGTVWTWGYNSFG 665
Query: 511 QLG 513
QLG
Sbjct: 666 QLG 668
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 164/363 (45%), Gaps = 39/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V+++G+N+SGQLG GTT P P+ L ++ AG+ ++
Sbjct: 143 AGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRLVPVPVLGLS--EVVAVEAGSSHSLA 200
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G ++ G+ G +LV V+ L + ++A G+ ++ + +G
Sbjct: 201 LRSDGTVWAWGANASGQLGDGTTTKRLVP----VQVLSGVVAMEA--GSGYSLAVRNDGT 254
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T + P +LG E VV +AAG LAL + V++
Sbjct: 255 VWAWGYNFSGQLGDDTVTSRSTPVQVLGLSE---VVAVAAGSSLSLALRSDGT---VWAW 308
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+ G G+ ++ P Q L V VAAG H+ V DG V WG
Sbjct: 309 GSNDYGQRGEGTTSNRAFP-----VQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNAS 363
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G S P VQ L+ V + V+ G ++ + DG V+++G S LG
Sbjct: 364 GQLGEGTTSNRSEPVQVQGLSGV--VAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTT 421
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D L P V L V V S + A+ G ++ +G G
Sbjct: 422 TD--------RLVPVQVQGLSGVVAVVAGTSF---------SLAVRNDGTVWGWGYNGYG 464
Query: 511 QLG 513
QLG
Sbjct: 465 QLG 467
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 172/375 (45%), Gaps = 41/375 (10%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A AG HS+A+ + G V+++G N GQLG+G+ P ++ L G + AG +
Sbjct: 41 AAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLSG--GVSVDAGHYHS 98
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ + D G V+A+G + G+ G +LV P V+ L + V A G+ + L +
Sbjct: 99 LAVRDDGTVWAWGDNPNGQLGEGTTTRRLV--PVQVQGLSEVVAVTA--GSSHSLALRSD 154
Query: 270 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G V+ +WG +A +LG T N + P P+LG E VV + AG + LAL +
Sbjct: 155 GTVW--AWGANASGQLGEGTTTNRLVPVPVLGLSE---VVAVEAGSSHSLALRSDGT--- 206
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G G+LG G+ T P Q+L+ V + AG+ ++ V DG V WG+
Sbjct: 207 VWAWGANASGQLGDGTTTKRLVP-----VQVLS-GVVAMEAGSGYSLAVRNDGTVWAWGY 260
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG S P VQ L + + VA G + + DG V+++G + G
Sbjct: 261 NFSGQLGDDTVTSRSTP--VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGE 318
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
++ A L+ + + AH+ A+ G ++A+G+
Sbjct: 319 GTTSNRAFPVQARGLSGGVAVAAGY-----------------AHSLAVRSDGTVWAWGSN 361
Query: 508 DKGQLGIELVNNQTE 522
GQLG +N++E
Sbjct: 362 ASGQLGEGTTSNRSE 376
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 174/361 (48%), Gaps = 43/361 (11%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G V++ G+N SGQLG GT + R P++ L ++ AAAG+ ++ + + G V+A+G
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDN--RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAWG 61
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--D 280
+ +G+ G G++ P V+ L V A G++ + + +G V+ +WG+ +
Sbjct: 62 YNGYGQLGNGSLGSR--AEPVQVQGLSGGVSVDA--GHYHSLAVRDDGTVW--AWGDNPN 115
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LG T + P + G E VV + AG + LAL + V++ G G+LG
Sbjct: 116 GQLGEGTTTRRLVPVQVQGLSE---VVAVTAGSSHSLALRSDGT---VWAWGANASGQLG 169
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G+ T+ P +L L VV V AG+ H+ + DG V WG G LG G
Sbjct: 170 EGTTTNRLVP-----VPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTT 224
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
VP VQ L+ V A+ +G + V DG V+++G S LG + + +R
Sbjct: 225 KRLVP--VQVLSGVVAMEAGSG--YSLAVRNDGTVWAWGYNFSGQLGDDTVT----SRS- 275
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
TP V L + VV ++ +S+ + AL G ++A+G+ D GQ G +N
Sbjct: 276 ---TPVQVLGLSE----VVAVAAGSSL-----SLALRSDGTVWAWGSNDYGQRGEGTTSN 323
Query: 520 Q 520
+
Sbjct: 324 R 324
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 164/365 (44%), Gaps = 43/365 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV G V+++G N +GQLG GTT P ++ L ++ AG+ ++
Sbjct: 93 AGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLS--EVVAVTAGSSHSLA 150
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G ++ G+ G +LV P L L + V+A G+ + L +G
Sbjct: 151 LRSDGTVWAWGANASGQLGEGTTTNRLVPVPVL--GLSEVVAVEA--GSSHSLALRSDGT 206
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG +A +LG T + P +L VV + AG Y LA+ + V+
Sbjct: 207 VW--AWGANASGQLGDGTTTKRLVPVQVLS-----GVVAMEAGSGYSLAVRNDGT---VW 256
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG + T P Q+L L VV VAAG+ + + DG V WG
Sbjct: 257 AWGYNFSGQLGDDTVTSRSTP-----VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSN 311
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
YG G G + P VQA + VA G + V DG V+++G S LG
Sbjct: 312 DYGQRGEGTTSNRAFP--VQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEG 369
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ NR V L VV +S S + A+ G ++A+G+
Sbjct: 370 TTS----NRSEPVQVQGL--------SGVVAVSAGAS-----SSLAIRSDGTVWAWGSNA 412
Query: 509 KGQLG 513
GQLG
Sbjct: 413 SGQLG 417
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 61/293 (20%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+A+ S G V+++GSN+SGQLG GTT + P ++ L G+ + AG ++
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSGV--VAVVAGTSFSLA 448
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G + +G+ G + V P V L + V A GN + + +G
Sbjct: 449 VRNDGTVWGWGYNGYGQ--LGTFTSLFVLVPVQVTGLSGVVAVAA--GNLHSLAVRSDGT 504
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA----------- 320
V+ ++ +LG + N P + G VV +AAG + LA+
Sbjct: 505 VWALGRNDNGQLGDGSWTNRSAPVQVTGL---SGVVSVAAGDSHSLAVRYDGSVWAWGYN 561
Query: 321 ----------------CQPSGMA--------------------VYSVGCGLGGKLGHGSR 344
Q +G++ V++ G L G+LG G+
Sbjct: 562 SFGQLGDGSWFQRSAPVQVTGLSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTT 621
Query: 345 TDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
+ + P ++Q + + V V G+ H+ + DG V TWG+ +G LG+G
Sbjct: 622 SSNQLVPVQVQQLRGV----VAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQD 379
+P G V++ G G+LG G+R + P Q+L L VV AA G+ H+ + D
Sbjct: 1 MRPDGT-VWAAGNNGSGQLGDGTRDNRSTP-----VQVLGLSEVVAAAAGSIHSLALRND 54
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G V WG+ YG LG+G+ + P VQ L+ + V G Y + V +DG V+++G
Sbjct: 55 GTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLS--GGVSVDAGHYHSLAVRDDGTVWAWGD 112
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ LG +G R L P V L +V +++T ++H+ AL G
Sbjct: 113 NPNGQLG-----EGTTTRR---LVPVQVQGLSEV------VAVTAG---SSHSLALRSDG 155
Query: 500 KLYAFGAGDKGQLGIELVNNQ 520
++A+GA GQLG N+
Sbjct: 156 TVWAWGANASGQLGEGTTTNR 176
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+A G T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G VY++GCG A LG G+ A L P+L+ L R+V IS+ +S
Sbjct: 632 TGQVYAWGCG--ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS----- 675
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H AL+ ++YA+G GQ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG 698
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 178/352 (50%), Gaps = 28/352 (7%)
Query: 147 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRII 200
++Q I AG + +++ G V + G S G+LG G +T ++ P RS++ ++
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK--KVS 461
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 259
+ G T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 462 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAG 519
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+A ++ +G +YT+ G+ RLGH + N L+ + N V +++ G + +AL
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ G V+S G G GKLGHG P++IE Q + ++ V AG+ + +
Sbjct: 577 S--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQSSLSLTST 632
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ S+G GQGN + P+ V+ L + + V ++S+ W A
Sbjct: 691 ---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTA 735
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 27/354 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG +++ +
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4076
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4077 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 4134
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-------LGTLENIPVV-QIAAGYCYLL 317
++ +G+++TF G+ RLG N P + +G N ++ +A G + L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A++ G V++ G G GKLG G+ T + P+ ++ + ++ VA G + +
Sbjct: 4195 AVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALT 4250
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG+V T+G R L G + P+ V L V VA G T ++ GD+Y++
Sbjct: 4251 KDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAW 4310
Query: 438 GCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G LG H N V P LVT L+ N R + +S W A
Sbjct: 4311 GSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 149/333 (44%), Gaps = 32/333 (9%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4074
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4075 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4132
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-----QPVV--VAAGA 370
A S +++ G G G+LG G+ +++K P + + + + ++ VA G
Sbjct: 4133 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGL 4190
Query: 371 WHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H V DG V +G G YG LG GN +S P+ V L + VA G + ++
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+DG VY+F G+ +G + +G+ H PQ V L V V +
Sbjct: 4251 KDGQVYTF--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------A 4295
Query: 490 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
HT ALT +G +YA+G+ +GQLG+ N+ E
Sbjct: 4296 EHTLALTSTGDIYAWGSNSEGQLGLGHTNHVRE 4328
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 23/210 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4035 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4094
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4095 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4152
Query: 448 NAIADGQGNRHANVLTPQLVTSLK-----QVNERVVQISLTNSIYWNAHTFALTESGKL- 501
G GN +N P+ VT+L+ Q + + S+ + HT A++ G +
Sbjct: 4153 -----GLGNT-SNKKLPERVTALEGYQIGQARNKSIICSVACGL---NHTLAVSADGSMV 4203
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+AFG GD G+LG+ N T + +P++VD+
Sbjct: 4204 WAFGDGDYGKLGL---GNSTAKSSPQKVDV 4230
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 32/252 (12%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 4115 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4174
Query: 200 IQA---------AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
QA A G T+ +S D V+AFG +G+ G K +SPQ V+ L
Sbjct: 4175 GQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLC 4232
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLE 302
I + + A G F+ L+++G+VYTF G D +G +H P V P+L
Sbjct: 4233 GIGIKKVACGTQFSVALTKDGQVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA--- 4284
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+ + +A G + LAL S +Y+ G G+LG G + P L+ Q N++
Sbjct: 4285 GVVIEDVAVGAEHTLALT---STGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4341
Query: 363 PVVVAAGAWHAA 374
++AG H+A
Sbjct: 4342 Q--ISAGRCHSA 4351
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IA++ G V+SFG +G+LGHG T ++P+ I +LQG+ I + AG+ ++
Sbjct: 569 GSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLS 628
Query: 212 ISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ GQVYA+G + G +E T L P+L+E L +V +IG+ LS
Sbjct: 629 LTSTGQVYAWGCGACLGCGSSE----ATAL--RPKLIEELAATRIVDISIGDSHCLALSH 682
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ VY +WGN++ G+ T P +P + G L+ I + Q++AG + LA P
Sbjct: 683 DNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG-LDGIAIQQVSAGTSHSLAWTALPR 738
Query: 325 GMAV 328
V
Sbjct: 739 DRQV 742
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 167/364 (45%), Gaps = 38/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ +T G V+++G NS+GQLG T + R P R I+ +G ++
Sbjct: 73 AGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQ-RLSPARLPVLEDIVSVVSGDAHSLA 131
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G +S G+ G T PQ VE ++ V A G+F + VL +G
Sbjct: 132 LGADGTVWTWGSNSSGQLGDGT--TTDRAEPQRVEGFTDVVAVAA--GDFHSLVLKSDGT 187
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG + +LG + P P+ G LE VV +AAG+ + LA+ AV
Sbjct: 188 VW--AWGTNFHGQLGQGHTQTGLWPKPVPG-LEG--VVALAAGFDFTLAVHADG---AVS 239
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G+LG G+ T P I + VAAG +HA +G+DG V TWG
Sbjct: 240 SWGANSFGQLGLGTFTQRLSPERIPTLSGIT----SVAAGTYHAVALGKDGTVWTWGSNS 295
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G +VP + + +A VA+ D + + E GDV ++G S LG
Sbjct: 296 SGQLGDGTWNDRAVPAPLPGVGGARA--VASLDAGSLALLEGGDVLAWGANNSGQLGDGD 353
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
AD TP LV L V V H AL + G L+A+G G
Sbjct: 354 TADRS--------TPSLVPELSAVTAVVGGAQ---------HALALRKDGTLWAWGGGLA 396
Query: 510 GQLG 513
GQLG
Sbjct: 397 GQLG 400
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 172/413 (41%), Gaps = 85/413 (20%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE------------------------- 185
++G HS+A+ + G V+++GSNSSGQLG GTT +
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVL 182
Query: 186 ------WR-------------------PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
W P+P+ L+G ++ AAG T+ + G V +
Sbjct: 183 KSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDFTLAVHADGAVSS 240
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G +SFG+ G +L SP+ + +L I V A G + L ++G V+T+ +
Sbjct: 241 WGANSFGQLGLGTFTQRL--SPERIPTLSGITSVAA--GTYHAVALGKDGTVWTWGSNSS 296
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LG T + P PL G V + AG LL G V + G G+LG
Sbjct: 297 GQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALL------EGGDVLAWGANNSGQLG 350
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G D P L+ + + V GA HA + +DG + WG G G LGHG E
Sbjct: 351 DGDTADRSTPSLVPELSAVT----AVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
VP V L +V ++ ATG + + EDG V+++G LG + + RH
Sbjct: 407 HVVPATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTE----RHVP 460
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V P L S++ V H+ A+ G ++ +G GQLG
Sbjct: 461 VRVPGL-PSVRAVAAA------------GHHSIAVAMDGTVWTWGRNAAGQLG 500
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 180/393 (45%), Gaps = 41/393 (10%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 198
G +C R S G HS+ + G V+++G N GQLG GTT P + L+G
Sbjct: 815 GVSCARSVAS----GGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEG-- 868
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I+ A G ++ + G V+A+G ++ G+ G +L +P+ +E+L ++ V+ A+
Sbjct: 869 IVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRL--TPRRIEALSDVMVI--AL 924
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + +G V+ + +LG E + P + G LE + +AAG + +
Sbjct: 925 GESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKG-LEGVG--SVAAGRAF--S 979
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA + G A ++ G G+LG GS + P + + L V+AGA HA +G+
Sbjct: 980 LAVRDDGTA-WAWGANESGQLGDGSNQSRRVPHRVASVKGLR----AVSAGAHHAMALGE 1034
Query: 379 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG V WG G LG G + P+ V L+DV++ VA G+ + V+ DG +S+
Sbjct: 1035 DGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVES--VAAGEQFSVAVAHDGTAFSW 1092
Query: 438 GCGESASLGHNAIADGQ-GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G E LG DG+ G R L+P V VV + W H AL
Sbjct: 1093 GSNEYGQLG-----DGKTGPR----LSPAEVKIGGSKARTVVTVG-----AWGQHAVALM 1138
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G L A+G GQLG T R +P +
Sbjct: 1139 ADGTLQAWGDNATGQLGD---GTTTRRSSPGEI 1168
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 174/407 (42%), Gaps = 75/407 (18%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ + S G V+++G+N GQLG G T+ P+P+ L+G+ + AAG T+
Sbjct: 174 AGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV--VALAAGFDFTLA 231
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V ++G +SFG+ G +L SP+ + +L I V A G + L ++G
Sbjct: 232 VHADGAVSSWGANSFGQLGLGTFTQRL--SPERIPTLSGITSVAA--GTYHAVALGKDGT 287
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL-------------- 317
V+T+ + +LG T + P PL G V + AG LL
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSG 347
Query: 318 -------------------------------ALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
ALA + G +++ G GL G+LGHG
Sbjct: 348 QLGDGDTADRSTPSLVPELSAVTAVVGGAQHALALRKDGT-LWAWGGGLAGQLGHGG--S 404
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
E+H L N+ + A G++H+ +DG V WG YG LG G VP
Sbjct: 405 ERHVVPATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVR 462
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
V L V+A VA + + V+ DG V+++G + LG DG A P
Sbjct: 463 VPGLPSVRA--VAAAGHHSIAVAMDGTVWTWGRNAAGQLG-----DGTTRDRAR---PVA 512
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V+ L V+ I+ S H AL G ++A+G GQLG
Sbjct: 513 VSGLTS----VLAIAAGGS-----HVLALRSDGDVWAWGYNALGQLG 550
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 168/367 (45%), Gaps = 38/367 (10%)
Query: 149 QAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+A+A GH SIAV G V+++G N++GQLG GTT + RP + L + I AAG
Sbjct: 470 RAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAI--AAGGS 527
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ + G V+A+G ++ G+ G G KL +P V L I V A G +F+ L+
Sbjct: 528 HVLALRSDGDVWAWGYNALGQLGDGTSGDKL--TPVRVPGLAPIQSVAA--GTYFSMALA 583
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G V+T+ G + +LG + P + G L +I + + + + ALA + G
Sbjct: 584 NDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKG-LSDIRNISVGSAH----ALAVRGDGT- 637
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG GS D P Q+ NL + V+ G H+ + DG V WG
Sbjct: 638 VWAWGDNNEGQLGDGSWMDRFAP-----VQVRNLTGITAVSGGRSHSLALHADGTVRAWG 692
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG G +P V+ L+ ++A+H G + D + +G LG
Sbjct: 693 SNGYGQLGDGTLTSRVLPSVIPGLSGIQALH--PGHLHVLALHADKTLRGWGYNRFGQLG 750
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
A G R P V + +V ER+ AH + G + A+GA
Sbjct: 751 LGAA--GWSAR------PVQVRGIGRV-ERLAAG--------RAHALLVRADGSVVAWGA 793
Query: 507 GDKGQLG 513
GQLG
Sbjct: 794 NASGQLG 800
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 177/415 (42%), Gaps = 86/415 (20%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+AV G +++G+N SGQLG G+ + P + S++G+R + +AGA M
Sbjct: 974 AGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRAV--SAGAHHAMA 1031
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+A+G ++ G+ G V PQ V L ++ V A G F+ ++ +G
Sbjct: 1032 LGEDGAVWAWGDNTLGQLGDGTS-AFTVMWPQRVAELSDVESVAA--GEQFSVAVAHDG- 1087
Query: 272 VYTFSWGN-------DARLGHHTEPNDVE----------------PHPLL----GTLEN- 303
FSWG+ D + G P +V+ H + GTL+
Sbjct: 1088 -TAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAW 1146
Query: 304 -------------------------IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
V ++ G + LAL + V++ G G+
Sbjct: 1147 GDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDGT---VWAWGANGFGQ 1203
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
LG G+ T P ++ + + V +AAG +H+ V DG V TWG+ +G LG G
Sbjct: 1204 LGDGTTTARAVPVPVQGLRDV----VAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTS 1259
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
E ++P V L V+A V GD+ + + DG V +G S LG + D R+
Sbjct: 1260 ESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD----RY 1313
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V LK V+ LT AHT AL + G ++ +G GQLG
Sbjct: 1314 TPV-------RLKDVD------GLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG 1355
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 171/379 (45%), Gaps = 46/379 (12%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ + G + ++G N++GQLG GTT P IR + R+ + GA ++ +
Sbjct: 1133 HAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGV--TRVTAVSTGAWHSLALRLD 1190
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + FG+ G + V P V+ L+++ + A G + + + +G V+T+
Sbjct: 1191 GTVWAWGANGFGQLGDGTTTARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTW 1246
Query: 276 SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ +LG T + P H L G V + G + LAL + V G
Sbjct: 1247 GYNTFGQLGDGTSESRALPVQVHKLEG------VQAVTGGDHHSLALHADGT---VSGWG 1297
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG GSRTD P ++ L V AGA H +G+DG V TWG +G
Sbjct: 1298 HNASGQLGDGSRTDRYTPVRLKDVDGLT----EVRAGAAHTVALGKDGTVWTWGDNAHGQ 1353
Query: 393 LGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG G VPK V L AI G + +F + +++G LG +
Sbjct: 1354 LGDGVTGPRMRLVPKPVSGLPAATAI--GAGAWHSFASGPEEGAFTWGRNSHGQLG---V 1408
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D +A PQ + L + +V+ S+ A+T+ G L ++G+ G
Sbjct: 1409 GD-----NAPRAEPQRMKLLSGL--KVIAGGADTSL-------AMTQEGVLMSWGSSLHG 1454
Query: 511 QLGIELVNNQTERGNPERV 529
LG+ ++ +R +P RV
Sbjct: 1455 TLGLGVLG---QRASPGRV 1470
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 170/372 (45%), Gaps = 37/372 (9%)
Query: 146 ENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
E A+AG G S+A+ S G V+++G+N+SGQ+G GT E+ PR I +L + +I A
Sbjct: 867 EGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDVMVI--AL 924
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + + + G V+A+G ++ G+ G + L+ P V+ L+ + V A G F+
Sbjct: 925 GESHALAVGEDGTVWAWGANASGQLGDGGETPSLL--PARVKGLEGVGSVAA--GRAFSL 980
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ +G + + +LG + + PH + +++ + V +AG + +AL
Sbjct: 981 AVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVA-SVKGLRAV--SAGAHHAMALGEDG- 1036
Query: 325 GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
AV++ G G+LG G+ P+ + + + VAAG + V DG
Sbjct: 1037 --AVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVE----SVAAGEQFSVAVAHDGTAF 1090
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS--EDGDVYSFGCGE 441
+WG YG LG G P V+ V G + V+ DG + ++G
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ LG DG R + +P + V +++ ++ W H+ AL G +
Sbjct: 1151 TGQLG-----DGTTTRRS---SPGEI-------RGVTRVTAVSTGAW--HSLALRLDGTV 1193
Query: 502 YAFGAGDKGQLG 513
+A+GA GQLG
Sbjct: 1194 WAWGANGFGQLG 1205
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 39/361 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISD 214
HS+A G V+++G NS GQLG GT E R P+R + G+ ++A A AG ++ ++
Sbjct: 428 HSLAALEDGSVWAWGRNSYGQLGDGTVTE--RHVPVR-VPGLPSVRAVAAAGHHSIAVAM 484
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G V+ +G+++ G+ G T+ P V L ++ + A G L +G V+
Sbjct: 485 DGTVWTWGRNAAGQLGDGT--TRDRARPVAVSGLTSVLAIAA--GGSHVLALRSDGDVWA 540
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + +LG T + + P + G P+ +AAG + +ALA + V++ G G
Sbjct: 541 WGYNALGQLGDGTSGDKLTPVRVPGL---APIQSVAAGTYFSMALANDGT---VWTWGEG 594
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G P ++ L +++ + V G+ HA V DG V WG G LG
Sbjct: 595 FEGQLGDGGGVQRLSPVAVK--GLSDIRNISV--GSAHALAVRGDGTVWAWGDNNEGQLG 650
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G+ P V+ L + A V+ G + + DG V ++G S G+ + DG
Sbjct: 651 DGSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHADGTVRAWG-----SNGYGQLGDG- 702
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIY-WNAHTFALTESGKLYAFGAGDKGQLG 513
LT +++ S+ + +S +++ + H AL L +G GQLG
Sbjct: 703 ------TLTSRVLPSV------IPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLG 750
Query: 514 I 514
+
Sbjct: 751 L 751
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 179/459 (38%), Gaps = 129/459 (28%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H +A+ S G V+++G N+ GQLG GT+ ++ P + L I+ + AAG +M
Sbjct: 524 AGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSV--AAGTYFSMA 581
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+++ G V+ +G + F E + G G SP V+ L +I + ++G+ + +G
Sbjct: 582 LANDGTVWTWG-EGF-EGQLGDGGGVQRLSPVAVKGLSDIRNI--SVGSAHALAVRGDGT 637
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N+ +LG + + P + N+ + ++ G + LAL + A S
Sbjct: 638 VWAWGDNNEGQLGDGSWMDRFAPV----QVRNLTGITAVSGGRSHSLALHADGTVRAWGS 693
Query: 331 VGCGLGGKLGHGSRTDEKHPRLI------------------------------EQFQLLN 360
G G +LG G+ T P +I +F L
Sbjct: 694 NGYG---QLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLG 750
Query: 361 L-------QPVVV---------AAGAWHAAVVGQDGRVCTWG------------------ 386
L +PV V AAG HA +V DG V WG
Sbjct: 751 LGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARA 810
Query: 387 ------------------------------WG--RYGCLGHGNEECESVPKVVQALNDVK 414
WG + G LG G P V+ L +
Sbjct: 811 VTVRGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGI- 869
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ VA G T+ + DG V+++G S +G + D LTP+ + +L
Sbjct: 870 -VAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVED--------RLTPRRIEALSD-- 918
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V+ I+L S H A+ E G ++A+GA GQLG
Sbjct: 919 --VMVIALGES-----HALAVGEDGTVWAWGANASGQLG 950
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 30/229 (13%)
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
E + ++IAAG + L L P+G AV++ G G+LG D RL +L L
Sbjct: 64 EPLSPMRIAAGAQHSLFL--TPTG-AVWAWGGNSAGQLGG---ADTSFQRL-SPARLPVL 116
Query: 362 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ +V V +G H+ +G DG V TWG G LG G + P+ V+ DV + VA
Sbjct: 117 EDIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDV--VAVAA 174
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GD+ + V+ DG V+++G LG G L P+ V L+ V
Sbjct: 175 GDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTG--------LWPKPVPGLEGVVALAAGF 226
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
T A+ G + ++GA GQLG+ T+R +PER+
Sbjct: 227 DF---------TLAVHADGAVSSWGANSFGQLGL---GTFTQRLSPERI 263
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRT 209
AG H++A+ G V+++G N+ GQLG G T R P+P+ L I AGA +
Sbjct: 1329 AGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAI--GAGAWHS 1386
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ +G++S G + GV PQ ++ L + V+ A G + +++E
Sbjct: 1387 FASGPEEGAFTWGRNSHG--QLGVGDNAPRAEPQRMKLLSGLKVI--AGGADTSLAMTQE 1442
Query: 270 GRVYTFSWGN 279
G + SWG+
Sbjct: 1443 GVL--MSWGS 1450
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS A + +++G NS GQLG G P+ ++ L G+++I A GA ++
Sbjct: 1381 AGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGLKVI--AGGADTSLA 1438
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTK 237
++ G + ++G G GV G +
Sbjct: 1439 MTQEGVLMSWGSSLHGTLGLGVLGQR 1464
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 157/297 (52%), Gaps = 21/297 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ AVT+ G +Y++G ++++G LGHG+ W P+ + L G+ +
Sbjct: 131 NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTV 190
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G T LI+ +GQ+Y FG +FG +G + + + P+ VESLK + + + G +
Sbjct: 191 SCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRTISVSCGVWH 248
Query: 263 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
TA + + G+++T+ G+ RLGH + ++P + +L + + A G+
Sbjct: 249 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCIPSLIDYNFHKAACGH 307
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ L + +++VG + G+LG+ D ++PRL+E+ QL V VA G++H
Sbjct: 308 TLTIGLT---TSGHIFTVGSSVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHV 362
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
AV+ G V TWG G G LGHG+ VP +V+AL D VA G T + +
Sbjct: 363 AVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAICQ 419
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 157/345 (45%), Gaps = 33/345 (9%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GTT + P+P+ S + + A G L++ +V+ +G++ G +G GT V
Sbjct: 61 GTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGT-GTN-V 118
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPL 297
P+LVESL V A G F T ++ G +YT+ G N LGH + + P +
Sbjct: 119 FQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV 178
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G L+ +PV ++ G + + S +Y+ G G G LGHG+R +P+ +E
Sbjct: 179 SGPLDGLPVSTVSCGTWHTALIT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVE--S 233
Query: 358 LLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
L L+ + V+ G WH A V G++ TWG G LGHG+ + P +
Sbjct: 234 LKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIP 293
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
+L D A G T ++ G +++ G LG N DG R+ ++ QL
Sbjct: 294 SLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLG-NPNNDG---RYPRLVEEQLGG 349
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VV+++ + H LT +G++Y +G G G+LG
Sbjct: 350 G------GVVEVACG-----SYHVAVLTNAGEVYTWGKGANGRLG 383
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 138/315 (43%), Gaps = 35/315 (11%)
Query: 216 GQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
G +Y +G + + Y T V P+ +ES + V A G A+++
Sbjct: 35 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
R+ V+T+ RLGH T N +P L+ +L V IA G + A+ +
Sbjct: 95 RQSEVFTWGEECSGRLGHGTGTNVFQPR-LVESLSICNVELIACGEFHTCAVTAT-GDLY 152
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+ G G LGHGS P+ + L L V+ G WH A++ G++ T+G
Sbjct: 153 TWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLDGLPVSTVSCGTWHTALITSSGQLYTFGD 211
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYSFG 438
G +G LGHGN S PK V++L ++ I V+ G + T V E G ++++G
Sbjct: 212 GTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWG 271
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
G+ LGH G+R + L P + SL + + + + T LT S
Sbjct: 272 DGDKYRLGH-------GDRSSK-LKPTCIPSL-------IDYNFHKAACGHTLTIGLTTS 316
Query: 499 GKLYAFGAGDKGQLG 513
G ++ G+ GQLG
Sbjct: 317 GHIFTVGSSVYGQLG 331
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 180/374 (48%), Gaps = 34/374 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG G EEE R + +L + + AG+ ++ I G+++ +G +
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQ 72
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK +SP V++L + +VQAAIG + + +GR Y + + G
Sbjct: 73 RGTLGHPPE-TKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGE 131
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E + L +IP+ Q A + +A + V + + GH
Sbjct: 132 EAERKEDGTRAL---RRDIPIPQRCAPKLKVRQVAAGGTHSVVLT-------QDGHVWTW 181
Query: 346 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
+ P ++ ++ L+ V V+A GA+H + +DG + WG YG LG G+ +
Sbjct: 182 GQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQ 241
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
S P V+ L+D+ + +A G + + ++++G+VY++G GE LG G+ +
Sbjct: 242 PRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-------GDDKS 294
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
+ + PQ V L E ++Q+S + H+ ALT G+++++G GD G+LG
Sbjct: 295 SHMVPQKVELL--AGEDIIQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---GR 344
Query: 520 QTERGNPERVDIDL 533
+ G+P V IDL
Sbjct: 345 KVTTGHPMEVPIDL 358
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 28/313 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGA 206
S +AG +S+A+ + G ++++G N G LGH T+ E P P+ +L G+ I+QAA G
Sbjct: 47 SAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106
Query: 207 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 260
+ + D G+ YA+G + +G EAE GT+ + P + V Q A G
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGG 166
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 316
+ VL+++G V+T+ G P D++ P + G LEN+ V+ + A
Sbjct: 167 THSVVLTQDGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVKVIAVGA----F 213
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA G+ +++ G G+LG G P +E L+L V +AAG WH+ +
Sbjct: 214 HNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTAL 270
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
++G V WG G +G LG G+++ VP+ V+ L I V+ G + ++ DG ++
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMF 330
Query: 436 SFGCGESASLGHN 448
S+G G+ LG+
Sbjct: 331 SYGRGDHGRLGYG 343
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+T G+++++G+N GQLG G T+ +P + L + ++ AA
Sbjct: 203 ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 262
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++ G+VYA+G+ G +G + + PQ VE L ++Q + G +
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV-PQKVELLAGEDIIQVSCGGTHSV 321
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR++++ G+ RLG+
Sbjct: 322 ALTRDGRMFSYGRGDHGRLGY 342
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
AV + G G G+LG G +E R + L + VV AG+ ++ + DGR+ TWG
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVV--AGSRNSLAICADGRLFTWG 69
Query: 387 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
W + G LGH E + ES P V AL V + A G + V + G Y++G E
Sbjct: 70 WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129
Query: 446 GHNAIADGQGNR--------------------------HANVLT----------PQLVTS 469
G A G R H+ VLT P
Sbjct: 130 GEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGD 189
Query: 470 LKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
+KQ++ RV + I A H ALTE G L+A+G + GQLG + R P
Sbjct: 190 IKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TGDTQPRSQP 246
Query: 527 ERVD 530
RV+
Sbjct: 247 IRVE 250
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 165/308 (53%), Gaps = 24/308 (7%)
Query: 136 LLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR 192
LL + C N + IA G H+ AVT+ G +Y++G ++++G LGHG+T W P+ +
Sbjct: 307 LLESLSIC---NVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVS 363
Query: 193 S-LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
L+G+++ + G T LI+ +GQ+Y FG +FG +G + T ++ P+ VESLK +
Sbjct: 364 GPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGL 421
Query: 252 FVVQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 302
+ + G + +A + + G+++T+ G+ RLGH ++P + +L
Sbjct: 422 RTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKP-TCVPSLI 480
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+ + A G+ + L SG +++VG + G+LG+ D ++PRL+E ++
Sbjct: 481 DYNFHKSACGHTLTIGLTT--SGH-MFTVGSSVYGQLGN-PNNDGRYPRLVED-KVGGGG 535
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
V VA G++H AV+ G V TWG G G LGHG+ VP +V+AL D +A G
Sbjct: 536 VVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGS 595
Query: 423 YTTFVVSE 430
T +S+
Sbjct: 596 SFTAAISQ 603
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 34/355 (9%)
Query: 171 SNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 229
S S G + G G T + P+P+ S + + A G LI+ +V+ +G++ G
Sbjct: 235 SGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRL 294
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHT 287
+G GT + P+L+ESL V A G F T ++ G +YT+ G N LGH +
Sbjct: 295 GHGA-GTSIF-QPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS 352
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ P + G LE + V ++ G + + S +Y+ G G G LGHG+R
Sbjct: 353 TVSHWIPKRVSGPLEGLQVSTVSCGTWHTALIT---SSGQLYTFGDGTFGALGHGNRETI 409
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNE 398
+P+ +E L L+ + V+ G WH+A V G++ TWG G LGHG+
Sbjct: 410 SYPKEVE--SLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDR 467
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P V +L D A G T ++ G +++ G LG N DG+
Sbjct: 468 SAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLG-NPNNDGR---- 522
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+L V ++V + + H LT +G++Y +G G G+LG
Sbjct: 523 ----YPRL------VEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLG 567
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
variabilis]
Length = 272
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 143/278 (51%), Gaps = 12/278 (4%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ FG GQLG G+TE+ + PR ++ L+ ++ AAGA T ++ G++Y G +
Sbjct: 2 VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
E++ GV+ +P V +L+ V + A G T + G V F ++G
Sbjct: 62 --ESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
VE ++ L ++ +V++AAG + LAL+ S V+S G G G LG G+
Sbjct: 120 GPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALS---STGGVFSCGNGSFGALGRGTTE 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-----GHGNEEC 400
PR I + L + V +A G H+A + DGRV TWG G++ L GHG+ E
Sbjct: 177 GNDVPRPISRLWPLGV--VQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN 234
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
S PK VQAL + V+ GD T +++EDG VY++G
Sbjct: 235 CSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 19/290 (6%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V+ FG+ G+ G T+ V P+LV+ LK+ VV A G TA ++ +G +Y
Sbjct: 1 EVWVFGRGDMGQ--LGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+++LG + + P + LE V ++A G + LA+ G AV + G
Sbjct: 59 SNEESQLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVV---DGGAVAAFGSAEY 114
Query: 337 GKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G++G G + PR+++ + +++ V VAAG H + G V + G G +G LG
Sbjct: 115 GQVGLGPCGARVELPRVVKDLRSMHI--VRVAAGGSHTLALSSTGGVFSCGNGSFGALGR 172
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G E VP+ + L + + +A G+ + ++ DG V ++G G+ L A G G
Sbjct: 173 GTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLL--PAFHCGHG 230
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+ N TP+ V +LK + R Q+S + HT LTE G +YA+G
Sbjct: 231 D-FENCSTPKPVQALKGIVGR--QVSCGDD-----HTVLLTEDGSVYAWG 272
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R+ AG H+ AVTS G +Y GSN QLG + P + +L+ ++ + A
Sbjct: 33 RDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRVTALEQFQVQRVAC 92
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T+ + D G V AFG +G+ G G + V P++V+ L+++ +V+ A G T
Sbjct: 93 GPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGAR-VELPRVVKDLRSMHIVRVAAGGSHTL 151
Query: 265 VLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G V++ G+ LG TE NDV P P + L + VVQIA G + A+
Sbjct: 152 ALSSTGGVFSCGNGSFGALGRGTTEGNDV-PRP-ISRLWPLGVVQIACGENHSAAITADG 209
Query: 324 SGMAVYSVGCGLGGKL-----GHGSRTDEKHPRLIEQFQ-LLNLQPVVVAAGAWHAAVVG 377
V + G G L GHG + P+ ++ + ++ Q V+ G H ++
Sbjct: 210 R---VLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQ---VSCGDDHTVLLT 263
Query: 378 QDGRVCTWG 386
+DG V WG
Sbjct: 264 EDGSVYAWG 272
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V +G G G LG G+ E VP++V+ L +++A G T V+ DG++Y G E
Sbjct: 2 VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ LG + ++ L P VT+L+Q + V AHT A+ + G +
Sbjct: 62 ESQLGVR--------QRSDALAPTRVTALEQFQVQRVACG-------PAHTLAVVDGGAV 106
Query: 502 YAFGAGDKGQLGI 514
AFG+ + GQ+G+
Sbjct: 107 AAFGSAEYGQVGL 119
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 44/388 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTM 210
G H ++S G ++++G+NS GQLGHG +++ PR + + + II + G ++
Sbjct: 1040 GWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSV 1099
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVL 266
+ + Q+Y++G +G+ +GV +T L + +++ V+ A G T VL
Sbjct: 1100 AVDQSFQIYSWGSSRYGQLGHGV-----LTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154
Query: 267 SREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+ G ++TF W + +LG + P +E ++G + + IAAG+ + ++ C
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVG-IHGERITAIAAGHSH--SIMC 1211
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
+G +YS G G+LGHG+ P+ I++ L +P++ ++ G +H + +
Sbjct: 1212 LDNG-DIYSWGANSKGQLGHGNIEKSLRPKQIDE---LKGKPIIKISCGHFHTVAISELN 1267
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV------SEDGDV 434
V WG G + CLG+G+ + E PK+++ + K V G Y T V S+ G+V
Sbjct: 1268 SVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNV 1327
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y G GE LG + P ++ SL +N +V S + +
Sbjct: 1328 YICGGGEHGKLG---TGGDLKTPFFDKPHPAVIPSLNSMN--IVGFSSGSEF-----SAI 1377
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTE 522
+T +G LY +G G+ GQ+G N +TE
Sbjct: 1378 ITNNGALYTWGYGNFGQIG----NGKTE 1401
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 29/319 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTML 211
G HS+AV +YS+GS+ GQLGHG + P+ I G +++ A G TM+
Sbjct: 1094 GGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMV 1153
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-----FVVQAAIGNFFTAVL 266
+ +G ++ FG + G+ G+ K P +E+ + + + A G+ + +
Sbjct: 1154 LKKSGDLFTFGWNDSGQL--GLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMC 1211
Query: 267 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G +Y SWG +++ LGH + P + L+ P+++I+ G+ + +A++ S
Sbjct: 1212 LDNGDIY--SWGANSKGQLGHGNIEKSLRPKQ-IDELKGKPIIKISCGHFHTVAISELNS 1268
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----GQD 379
VY G G LG+GS +E P++IE F +N + V G +H A V G D
Sbjct: 1269 ---VYCWGQGEHMCLGNGSNKNELSPKMIEFF--INKKIEKVVCGLYHTATVTAAENGSD 1323
Query: 380 -GRVCTWGWGRYGCLGHGNEECESV-----PKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
G V G G +G LG G + P V+ +LN + + ++G + +++ +G
Sbjct: 1324 RGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGA 1383
Query: 434 VYSFGCGESASLGHNAIAD 452
+Y++G G +G+ D
Sbjct: 1384 LYTWGYGNFGQIGNGKTED 1402
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 161/338 (47%), Gaps = 33/338 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P P + + A G +IS G+++ +G +S G+ +G+ K ++P+ VE+
Sbjct: 1023 PMPPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVET 1082
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI- 304
K+ ++ + G + + + ++Y SWG+ +LGH + P L +E+
Sbjct: 1083 FKSSPIIMISCGGEHSVAVDQSFQIY--SWGSSRYGQLGHGV----LTPQNLPKKIEDFT 1136
Query: 305 ---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
V+ IA GY + + L + SG +++ G G+LG G+ + P IE +++ +
Sbjct: 1137 GGQKVLAIATGYAHTMVL--KKSG-DLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGI 1193
Query: 362 ---QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
+ +AAG H+ + +G + +WG G LGHGN E PK + L I +
Sbjct: 1194 HGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKI 1253
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+ G + T +SE VY +G GE LG+ + + N L+P+++ +N+++
Sbjct: 1254 SCGHFHTVAISELNSVYCWGQGEHMCLGNGS--------NKNELSPKMIEFF--INKKIE 1303
Query: 479 QISLTNSIYWNAHTFAL---TESGKLYAFGAGDKGQLG 513
++ +Y A A ++ G +Y G G+ G+LG
Sbjct: 1304 KVVC--GLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HSI G +YS+G+NS GQLGHG E+ RP+ I L+G II+ + G T+
Sbjct: 1203 AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVA 1262
Query: 212 ISDAGQVYAFGKDSFGEAE-YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL---- 266
IS+ VY +G+ GE G K SP+++E N + + G + TA +
Sbjct: 1263 ISELNSVYCWGQ---GEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAE 1319
Query: 267 --SREGRVYTFSWGNDARL---GHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 320
S G VY G +L G P +PHP ++ +L ++ +V ++G + A
Sbjct: 1320 NGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEF---SA 1376
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----EQFQLLN 360
+ A+Y+ G G G++G+G D P I ++F L N
Sbjct: 1377 IITNNGALYTWGYGNFGQIGNGKTEDMWLPTKISLNDQRFMLFN 1420
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 174/352 (49%), Gaps = 29/352 (8%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G ++ +G N GQLG + P P +L +R +Q G +T+ VYA G
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGE-QTLF-----AVYATGY 361
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
+ G+ GT+ V+SP L+ES++++ + + A+ G LS EG V+++ D
Sbjct: 362 GA--GGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDG 419
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH N + ++ +L VV IAAG + AC S +++ G G G+LGH
Sbjct: 420 KLGHGNR-NSCDRPRVIESLRGKEVVDIAAGGAHS---ACITSTGELFTWGKGRYGRLGH 475
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G D+ P+L+E + + + V +G + D V +WG G YG LG G +
Sbjct: 476 GDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 535
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+P+ V+AL + V G + +++ G VY++G G+ LGH + +V
Sbjct: 536 KIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGS--------DDHV 587
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L+ N V+ I+ T S+ H A T+ G+++ +G D+GQLG
Sbjct: 588 RRPRKVAALQGKN--VISIA-TGSL----HCVACTDQGEVFTWGDNDEGQLG 632
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 20/277 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S+G V+S+G G+LGHG RPR I SL+G ++ AAG +
Sbjct: 396 SGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSAC 455
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G+++ +GK +G +G ++ P+LVE+LK + V+ A G+ T ++ +
Sbjct: 456 ITSTGELFTWGKGRYGRLGHGDSEDQM--KPKLVEALKGVRVIDVACGSGDAQTLCITDD 513
Query: 270 GRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
V+++ G+ +LG P VE L+G VV++ G + +AL S
Sbjct: 514 DSVWSWGDGDYGKLGRGGSDGCKIPQKVE--ALIGQ----GVVKVECGSQFSVALT--KS 565
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G VY+ G G +LGHGS + PR + Q N+ + +A G+ H G V T
Sbjct: 566 G-CVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNV--ISIATGSLHCVACTDQGEVFT 622
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG G LG G+ P++V AL K VA G
Sbjct: 623 WGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACG 659
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 34/259 (13%)
Query: 266 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 314
LSR +T SWG ++ H + VE P P L + VQ+ G
Sbjct: 293 LSRRPDDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVKLPTPC-DALAALRPVQLIGGEQ 351
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L A VY+ G G GG+LG G P L+E Q ++++ V V +G H
Sbjct: 352 TLFA---------VYATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCL 402
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ +G V +WG G LGHGN P+V+++L + + +A G + ++ G++
Sbjct: 403 ALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGEL 462
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+++G G LGH D + P+LV +LK V RV+ ++ + +A T
Sbjct: 463 FTWGKGRYGRLGHGDSEDQ--------MKPKLVEALKGV--RVIDVACGSG---DAQTLC 509
Query: 495 LTESGKLYAFGAGDKGQLG 513
+T+ ++++G GD G+LG
Sbjct: 510 ITDDDSVWSWGDGDYGKLG 528
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+N +IA G H +A T +G V+++G N GQLG G+T RPR + +LQG +I + A
Sbjct: 599 KNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVAC 658
Query: 205 GAGRTMLISDAGQVYA 220
G+ ++ S + V A
Sbjct: 659 GSAHSLAWSTSKPVNA 674
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 178/365 (48%), Gaps = 39/365 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFG 222
++ +G S GQLG G TE+E+ PR + +L+ + + + G T + G VY G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
+ FG+ + K T+P+ V +++ + + G T +S +G V F+WG+++
Sbjct: 61 SNEFGQ----LGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLV--FAWGDNSY 114
Query: 283 ----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
LG + +L L + VVQIA G + +AL SG ++ G G+
Sbjct: 115 GQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTI--SG-HLFCWGDNSSGQ 171
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPV---VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
LG G + H + E +L+L V +++AG H+ + G + WG YG LG
Sbjct: 172 LGIG----KTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGV 227
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
+ +P ++++L +V+ G+ T V++ DG V++FGCG S LGHN+
Sbjct: 228 HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNS------ 281
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGI 514
N H TP+ V L + V QI+ AHT AL SG++Y FG G GQLG+
Sbjct: 282 NHHE--YTPRKVFEL--MGSVVTQIACG-----RAHTLALVPSSGRVYTFGRGGDGQLGL 332
Query: 515 ELVNN 519
+ NN
Sbjct: 333 GVTNN 337
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 15/299 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ + G VY+ GSN GQLG + P + +++ I + G T+ +
Sbjct: 43 GWNHTAFLCKDGTVYTCGSNEFGQLGQEKSHT--NPESVHAIETFTITKVTCGKAHTVAV 100
Query: 213 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
SD G V+A+G +S+G+ G + K+ T P++++ L + VVQ A G + L+ G
Sbjct: 101 SDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGH 160
Query: 272 VYTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+ F WG+++ +LG T + EP P+L +L +P + I+AG + AL+ S A+
Sbjct: 161 L--FCWGDNSSGQLGIGKTHSSMSEPAPVL-SLNGVPFMLISAGGAHSFALS---SSGAL 214
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG TD P L++ + + V+ G H AV+ DG V T+G G
Sbjct: 215 FGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGV--CYVSCGEKHTAVLTSDGGVFTFGCG 272
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 446
G LGH + E P+ V L +A G +T +V G VY+FG G LG
Sbjct: 273 TSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLG 331
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 15/255 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR---PRPIRSLQGIRIIQAAA 204
++ G H++AV+ +G+V+++G NS GQ+G G+ +E P+ ++ L + ++Q A
Sbjct: 88 TKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIAC 147
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G +M ++ +G ++ +G +S G+ G + + + P V SL + + + G +
Sbjct: 148 GCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSM-SEPAPVLSLNGVPFMLISAGGAHSF 206
Query: 265 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
LS G + F WG + +LG H + P LL +L + V ++ G + L
Sbjct: 207 ALSSSGAL--FGWGKNEYGQLGVHDTTDRPLP-TLLKSLRSQGVCYVSCGEKHTAVLT-- 261
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 381
S V++ GCG G+LGH S E PR + F+L+ +A G H A+V GR
Sbjct: 262 -SDGGVFTFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGR 318
Query: 382 VCTWGWGRYGCLGHG 396
V T+G G G LG G
Sbjct: 319 VYTFGRGGDGQLGLG 333
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 211
G H+ +TS G V++FG +SGQLGH + E+ PR + L G + Q A G T+ L
Sbjct: 253 GEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLAL 312
Query: 212 ISDAGQVYAFGKDSFGEAEYGV 233
+ +G+VY FG+ G+ GV
Sbjct: 313 VPSSGRVYTFGRGGDGQLGLGV 334
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 9/239 (3%)
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
L+S G VY +G + FG+ G ++L + P + L N+FVV A+ G T +LS+EG
Sbjct: 7 LVSGLGDVYTWGANFFGQ--LGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLLSKEG 63
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V++F G + RLGH N P P+ +LE+ + IAAG+ + +A+ +++
Sbjct: 64 KVFSFGDGANGRLGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAIDDDGK---LFT 119
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
GCG G+LGHG+ D PR +++ + ++ ++ + H+AV ++G V TWG G +
Sbjct: 120 WGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEH 179
Query: 391 GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G+ E P +V+++ D + + V+ G T V+ DG + ++G G+ LGH
Sbjct: 180 GQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGH 238
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ V+ G VY++G+N GQLG + P + L + ++ A+ G T+L+
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLL 59
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S G+V++FG + G +G + + PQ + SL++ + A G + + +G++
Sbjct: 60 SKEGKVFSFGDGANGRLGHG--NCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKL 117
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+T+ GN RLGH + P + L I + + A Y + C +G V++ G
Sbjct: 118 FTWGCGNAGRLGHGNVLDVWRPR-FVDRLYRIRMKAMMASGSYDHSAVCCENG-TVWTWG 175
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G G+LG GS P L++ NL V V+ G H A V DG + TWG G +G
Sbjct: 176 LGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQ 235
Query: 393 LGHGN 397
LGHGN
Sbjct: 236 LGHGN 240
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 22/257 (8%)
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + A++S G VYT+ +LG P L L N+ VV + G + L
Sbjct: 1 GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSEL--HLPNVFVVSASCGGMHTLL 58
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L+ + V+S G G G+LGHG+ + P+ I + + + +AAG H+ +
Sbjct: 59 LSKEGK---VFSFGDGANGRLGHGNCRNYSLPQPIASLE--SKRITFIAAGWTHSMAIDD 113
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYT-TFVVSEDGDVYS 436
DG++ TWG G G LGHGN P+ V L ++ +A+G Y + V E+G V++
Sbjct: 114 DGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWT 173
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G GE H + G H L P LV S+ N +V++S AHT A+T
Sbjct: 174 WGLGE-----HGQLGVGSTESH---LEPVLVKSMADANLHIVEVSCGG-----AHTAAVT 220
Query: 497 ESGKLYAFGAGDKGQLG 513
G L +G GD GQLG
Sbjct: 221 NDGTLLTWGRGDWGQLG 237
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G G+LG R + L + L N+ V + G H ++ ++G+V ++G
Sbjct: 14 VYTWGANFFGQLG---RDYSRLWSLPSELHLPNVFVVSASCGGMHTLLLSKEGKVFSFGD 70
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G G LGHGN S+P+ + +L + +A G + + +DG ++++GCG + LGH
Sbjct: 71 GANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGH 130
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ D V P+ V L ++ + + S + H+ E+G ++ +G G
Sbjct: 131 GNVLD--------VWRPRFVDRLYRIRMKAMMASGSYD-----HSAVCCENGTVWTWGLG 177
Query: 508 DKGQLGIELVNNQTE 522
+ GQLG+ + E
Sbjct: 178 EHGQLGVGSTESHLE 192
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 8/198 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
A G H++ ++ +G V+SFG ++G+LGHG P+PI SL+ RI AAG
Sbjct: 48 SASCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTH 107
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV-VQAAIGNF-FTAVL 266
+M I D G+++ +G + G +G V P+ V+ L I + A G++ +AV
Sbjct: 108 SMAIDDDGKLFTWGCGNAGRLGHG--NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC 165
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSG 325
G V+T+ G +LG + + +EP + + N+ +V+++ G + A+ +
Sbjct: 166 CENGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGT- 224
Query: 326 MAVYSVGCGLGGKLGHGS 343
+ + G G G+LGHG+
Sbjct: 225 --LLTWGRGDWGQLGHGN 240
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 166/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGHG E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGHG--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG + P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ +G +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHGREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G +
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKD 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLG-KDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 162/322 (50%), Gaps = 19/322 (5%)
Query: 133 LRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 188
LR ++A C R + G HS+ + G VY+ G N+ GQLGH E +P
Sbjct: 65 LRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKP 122
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVES 247
I +L I+ A G ++ +SD GQ++++G S G + G+ T+ V P+L++
Sbjct: 123 EQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQK 180
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPV 306
L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P + +LE IP+
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPL 239
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 365
Q+AAG + AL+ SG AV++ G G+LG D + P + +LL Q VV
Sbjct: 240 AQVAAGGAHSFALSL--SG-AVFAWGMNNAGQLGLSDEEDRESPCHV---KLLRTQKVVY 293
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYT 424
++ G H AV+ + G V T+G G G LGH + E P+ V L + +A G +T
Sbjct: 294 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 353
Query: 425 TFVVSEDGDVYSFGCGESASLG 446
V G +Y+FGCG LG
Sbjct: 354 LAFVPSSGLIYAFGCGARGQLG 375
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 143/295 (48%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + V + A G + L +G VYT +LGH E N E
Sbjct: 68 IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 124
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + +V +A G + LAL+ + ++S G G G+LG + D PRLI++
Sbjct: 125 IGALADQNIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 180
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 181 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 238
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G +F +S G V+++G + LG + D + H +L Q
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 289
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 290 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 335
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 83 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQNIVHVAC 138
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 199 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 253
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 314 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 358
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 359 SSGLIYAFGCGARGQLG 375
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 188 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 247
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+A+G ++ G + G+ + SP V+ L+ VV + G TAVL+
Sbjct: 248 HSFALSLSGAVFAWGMNNAG--QLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 362
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 363 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 391
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 199 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 257
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 258 VFAWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 312
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 313 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 370
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 371 RGQLGTGHTCNVKCPSPVK 389
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+++G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 299
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 300 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 357
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 358 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 390
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G + G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDG--QLGL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ Q ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 169/367 (46%), Gaps = 45/367 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV G V+S+G N+ GQLG GTT + P ++ L G+ I +AG T+
Sbjct: 1034 AGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGVTAI--SAGDAHTVA 1091
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G++S+G+ G T +P V+ L + + A G+ T L ++G
Sbjct: 1092 LRRDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTGVIAI--AAGSLHTVALRQDGT 1147
Query: 272 VYTF---SWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
V+ + SWG D H P V+ L G V+ IAAG + +AL +
Sbjct: 1148 VWAWGRNSWGQLGDGTTTHRATP--VQVQGLTG------VIAIAAGSLHTVALRQDGT-- 1197
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG G+ T P ++ + +AAG +H A V QDG TWG
Sbjct: 1198 -VWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVT----TIAAGYFHTAAVRQDGTAWTWG 1252
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ +G LG G + P VQ L V A+ A G T VV EDG V+++G LG
Sbjct: 1253 FNLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLG 1310
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ + D R V L + R HT A++ G + +G
Sbjct: 1311 NGSSTD----RSTPVQVEALTGAFSLAAGRF-------------HTVAMSPDGAGWGWGR 1353
Query: 507 GDKGQLG 513
+ GQ+G
Sbjct: 1354 NNLGQVG 1360
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 150/303 (49%), Gaps = 22/303 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ G V+++G NS GQLG GTT P ++ L G+ I AAG+ T+
Sbjct: 1084 AGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1141
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G++S+G+ G T +P V+ L + + A G+ T L ++G
Sbjct: 1142 LRQDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQGLTGVIAI--AAGSLHTVALRQDGT 1197
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + + +LG T + P + G V IAAGY + A+ + G A ++
Sbjct: 1198 VWAWGFNDLGQLGDGTTTRRLTPAQVQGL---TGVTTIAAGYFHTAAV--RQDGTA-WTW 1251
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G L G+LG G+ TD P ++ ++ +AAG H VVG+DG V W WG
Sbjct: 1252 GFNLWGQLGDGTFTDRATPVQVQGLTGVS----ALAAGYAHTVVVGEDGTV--WAWGNNS 1305
Query: 392 C--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
LG+G+ S P V+AL A +A G + T +S DG + +G +G
Sbjct: 1306 GTQLGNGSSTDRSTPVQVEALT--GAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGT 1363
Query: 450 IAD 452
AD
Sbjct: 1364 TAD 1366
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 39/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG G ++A+ G ++++GSNS GQLG+GTT +RP ++ L G+ I AA+G T+
Sbjct: 278 AGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAI-AASGI-HTVA 335
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G ++A+G +S G+ G T + +P V+ L + + A G +T ++G
Sbjct: 336 LRQDGTLWAWGNNSSGQLGDGT--TTVRFTPVQVQGLTGVTAI--AAGYLYTVASKQDGT 391
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T + P + G V IAAGY Y +A + G V+
Sbjct: 392 VW--AWGDNEWGQLGDGTTTRRLTPVQVQGL---TGVTAIAAGYLY--TVASKQDGT-VW 443
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G +LG G+ + P ++ + + +AA V QDG V WG
Sbjct: 444 AWGDNKRSQLGEGAVSQRHTPGEVQGLEGIT----AIAASNLLTVAVRQDGTVWAWGDNA 499
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G P VQ L V A VA DY V +DG V+++G G LG
Sbjct: 500 RGQLGDGTTTRRLTPVQVQGLAGVTA--VAASDYHLVAVRQDGTVWAWGVGFWGQLG--- 554
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG G + + Q +T + + + HT AL + G ++A+G +
Sbjct: 555 --DGTGMDRSTPVQVQGLTGVTAIAAG------------SNHTVALRQDGTVWAWGFNNY 600
Query: 510 GQLG 513
GQLG
Sbjct: 601 GQLG 604
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 171/377 (45%), Gaps = 44/377 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+++A G V+++G N GQLG GTT P ++ L G+ I AAG T+
Sbjct: 382 YTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAI--AAGYLYTVASKQD 439
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + ++ G +P V+ L+ I + A+ N T + ++G V+
Sbjct: 440 GTVWAWGDNK--RSQLGEGAVSQRHTPGEVQGLEGITAIAAS--NLLTVAVRQDGTVW-- 493
Query: 276 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+WG++AR LG T + P + G V +AA +L+A+ + V++ G
Sbjct: 494 AWGDNARGQLGDGTTTRRLTPVQVQGL---AGVTAVAASDYHLVAVRQDGT---VWAWGV 547
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G G+LG G+ D P Q+ L V +AAG+ H + QDG V WG+ YG
Sbjct: 548 GFWGQLGDGTGMDRSTP-----VQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQ 602
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG G P VQ A+ +A G T + +DG V+++G LG
Sbjct: 603 LGDGTTAGHLTP--VQVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTT- 659
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+RH +P V L V I++ + N HT A+ + G ++ +G GQL
Sbjct: 660 ---HRH----SPVQVQGLADV------IAIATN---NGHTVAVRQDGTVWTWGLNSSGQL 703
Query: 513 GIELVNNQTERGNPERV 529
G T+R P +V
Sbjct: 704 GD---GTTTQRLTPVQV 717
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 170/380 (44%), Gaps = 42/380 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A + G V+++G NSSGQLG GT+ + + P ++ L G+ + AAG +
Sbjct: 128 AGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTAV--AAGRNHSAA 185
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G + G+ G +L +P V+ L + + A + T L ++G
Sbjct: 186 LGQGGTVWTWGDNLVGQLGDGTSTQRL--TPVQVQGLTGVIAISAN--DSETVALRQDGT 241
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WGN++ +LG T P +LG V IAAG + +AL + ++
Sbjct: 242 VW--AWGNNSSGQLGDGTTTVRFTPVQVLGL---TGVTAIAAGGGFAVALRQDGT---LW 293
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+G+ P EQ Q L + A+G H + QDG + WG
Sbjct: 294 AWGSNSRGQLGNGTTFGSYRP---EQVQGLTGVTAIAASGI-HTVALRQDGTLWAWGNNS 349
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G P VQ L V AI A G T +DG V+++G E LG
Sbjct: 350 SGQLGDGTTTVRFTPVQVQGLTGVTAI--AAGYLYTVASKQDGTVWAWGDNEWGQLG--- 404
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG R LTP V L V +T A + G ++A+G +
Sbjct: 405 --DGTTTRR---LTPVQVQGLTGVTAIAAGY---------LYTVASKQDGTVWAWGDNKR 450
Query: 510 GQLGIELVNNQTERGNPERV 529
QLG V+ +R P V
Sbjct: 451 SQLGEGAVS---QRHTPGEV 467
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 159/366 (43%), Gaps = 39/366 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ G V+++G N+ GQLG GTT P + + G I AAG T+
Sbjct: 578 AGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAVAI--AAGGSHTVA 635
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G + +G+ G T SP V+ L ++ + A N T + ++G
Sbjct: 636 LLQDGTVWTWGYNIWGQLGDGT--TTHRHSPVQVQGLADVIAI--ATNNGHTVAVRQDGT 691
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM----A 327
V+T+ + +LG T + P + G + + L + Q M
Sbjct: 692 VWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAI----------LTSSSQTVAMRQDRT 741
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+++ G G+LG G+ T P ++ + +AAG +H A GQDG + TWG
Sbjct: 742 LWAWGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGL 797
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
YG LG G +P VQ L A +A GD T V +DG V+++G S LG
Sbjct: 798 NSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGD 857
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
A LTP V QV + ++ Y H A + G L+ +G
Sbjct: 858 GTT--------AQSLTPVQV----QVQGLMDVTAMAAGGY---HMAAAGQDGTLWTWGLN 902
Query: 508 DKGQLG 513
GQLG
Sbjct: 903 SYGQLG 908
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 162/380 (42%), Gaps = 36/380 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H A G ++++G NS GQLG G P ++ L AAG T+
Sbjct: 778 AGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVA 837
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G L V+ L ++ + A G + A ++G
Sbjct: 838 VRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAM--AAGGYHMAAAGQDGT 895
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
++T+ + +LG + P + G ++ V +AAG Y +A A Q +++
Sbjct: 896 LWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VTAMAAG-GYHMAAAGQDG--TLWTW 949
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G + P ++ + +AAG +H A GQDG + TWG YG
Sbjct: 950 GLNSYGQLGGGPLSYRLLPVQVQGL----MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYG 1005
Query: 392 CLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
LG G ++ V VQ L V AI A G T V +DG V+S+G LG
Sbjct: 1006 QLGGGPLSQSLTPVQVQVQGLTGVAAI--AAGFSHTLAVRQDGTVWSWGGNAYGQLGDGT 1063
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
A LTP V L V IS +AHT AL G ++A+G
Sbjct: 1064 T--------AQSLTPVQVQGLTGVTA----ISAG-----DAHTVALRRDGTVWAWGRNSW 1106
Query: 510 GQLGIELVNNQTERGNPERV 529
GQLG T R P +V
Sbjct: 1107 GQLGD---GTTTHRATPVQV 1123
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 164/361 (45%), Gaps = 43/361 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++AV G V+++G+N GQLG GTT R P++ + G I AAG T+ S
Sbjct: 84 HTLAVRQDGTVWAWGNNDDGQLGDGTTTR--RFSPVQVMTGATAI--AAGIYHTVAASQD 139
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+ +G++S G+ G + SP V+ L + V A G +A L + G V+T
Sbjct: 140 GTVWTWGRNSSGQLGDGTSIQRF--SPVQVQGLTGVTAV--AAGRNHSAALGQGGTVWT- 194
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
WG++ +LG T + P + G V+ I+A +AL + V++ G
Sbjct: 195 -WGDNLVGQLGDGTSTQRLTPVQVQGL---TGVIAISANDSETVALRQDGT---VWAWGN 247
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G+ T P Q+L L V +AAG A + QDG + WG G
Sbjct: 248 NSSGQLGDGTTTVRFTP-----VQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQ 302
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG+G P+ VQ L V AI A+G + T + +DG ++++G S LG D
Sbjct: 303 LGNGTTFGSYRPEQVQGLTGVTAI-AASGIH-TVALRQDGTLWAWGNNSSGQLG-----D 355
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G TP V L V +T A + G ++A+G + GQL
Sbjct: 356 GTTTVR---FTPVQVQGLTGVTAIAAGY---------LYTVASKQDGTVWAWGDNEWGQL 403
Query: 513 G 513
G
Sbjct: 404 G 404
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 35/361 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
++A+ ++++G N GQLG GTT R P++ +QG+ + A A G M +
Sbjct: 732 QTVAMRQDRTLWAWGDNHWGQLGDGTTTR--RLTPVQ-VQGLMDVTAMAAGGYHMAAAGQ 788
Query: 216 -GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G ++ +G +S+G+ G +L+ P V+ L + A G+ T + ++G V+
Sbjct: 789 DGTLWTWGLNSYGQLGGGPLSYRLL--PVQVQGLTSATATAIAAGDSHTVAVRQDGTVW- 845
Query: 275 FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+WG++ +LG T + P + ++ + V A Y +A A Q +++ G
Sbjct: 846 -AWGSNFSGQLGDGTTAQSLTPVQV--QVQGLMDVTAMAAGGYHMAAAGQDG--TLWTWG 900
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G + P ++ + +AAG +H A GQDG + TWG YG
Sbjct: 901 LNSYGQLGGGPLSYRLLPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 956
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG G +P VQ L V A+ A G Y +DG ++++G LG
Sbjct: 957 LGGGPLSYRLLPVQVQGLMSVTAM--AAGGYHMAAAGQDGTLWTWGLNSYGQLG------ 1008
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G + LTP V QV ++ +HT A+ + G ++++G GQL
Sbjct: 1009 --GGPLSQSLTPVQV----QVQGLTGVAAIAAGF---SHTLAVRQDGTVWSWGGNAYGQL 1059
Query: 513 G 513
G
Sbjct: 1060 G 1060
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ G V+++G NS GQLG GTT P ++ L G+ I AAG+ T+
Sbjct: 1134 AGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVA 1191
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G +L +P V+ L + + A G F TA + ++G
Sbjct: 1192 LRQDGTVWAWGFNDLGQLGDGTTTRRL--TPAQVQGLTGVTTI--AAGYFHTAAVRQDGT 1247
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+T+ + +LG T + P + G V +AAGY + + + + V++
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATPVQVQGL---TGVSALAAGYAHTVVVGEDGT---VWAW 1301
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-- 389
G G +LG+GS TD P +E +AAG +H + DG WGWGR
Sbjct: 1302 GNNSGTQLGNGSSTDRSTPVQVEAL----TGAFSLAAGRFHTVAMSPDG--AGWGWGRNN 1355
Query: 390 YGCLGHGNEECESVP 404
G +G G P
Sbjct: 1356 LGQVGDGTTADRPTP 1370
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 70/169 (41%), Gaps = 28/169 (16%)
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
PV+ A H V QDG V WG G LG G P VQ + AI A G
Sbjct: 75 PVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSP--VQVMTGATAI--AAGI 130
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ--I 480
Y T S+DG V+++G S LG DG TS+++ + VQ
Sbjct: 131 YHTVAASQDGTVWTWGRNSSGQLG-----DG--------------TSIQRFSPVQVQGLT 171
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+T H+ AL + G ++ +G GQLG T+R P +V
Sbjct: 172 GVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGD---GTSTQRLTPVQV 217
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 180/374 (48%), Gaps = 34/374 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG G EEE R + +L + + AG+ ++ I G+++ +G +
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQ 72
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK +SP V++L + +VQAAIG + + +GR Y + + G
Sbjct: 73 RGTLGHPPE-TKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGE 131
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E + L +IP+ Q A + +A + V + + GH
Sbjct: 132 EAERKEDGTRALR---RDIPIPQGCAPKLKVRQVAAGGTHSVVLT-------QDGHVWTW 181
Query: 346 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
+ P ++ ++ L+ V V+A GA+H + +DG + WG YG LG G+ +
Sbjct: 182 GQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQ 241
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
S P V+ L+D+ + +A G + + ++++G+VY++G GE LG G+ +
Sbjct: 242 PRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF-------GDDKS 294
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
+ + PQ V L E ++Q+S + H+ ALT G+++++G GD G+LG
Sbjct: 295 SHMVPQKVELL--AGEDIIQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---GR 344
Query: 520 QTERGNPERVDIDL 533
+ G+P V IDL
Sbjct: 345 KVTTGHPMEVPIDL 358
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 28/313 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGA 206
S +AG +S+A+ + G ++++G N G LGH T+ E P P+ +L G+ I+QAA G
Sbjct: 47 SAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106
Query: 207 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 260
+ + D G+ YA+G + +G EAE GT+ + P + V Q A G
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGG 166
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 316
+ VL+++G V+T+ G P D++ P + G LEN+ V+ + A
Sbjct: 167 THSVVLTQDGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVKVIAVGA----F 213
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LA G+ +++ G G+LG G P +E L+L V +AAG WH+ +
Sbjct: 214 HNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTAL 270
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
++G V WG G +G LG G+++ VP+ V+ L I V+ G + ++ DG ++
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMF 330
Query: 436 SFGCGESASLGHN 448
S+G G+ LG+
Sbjct: 331 SYGRGDHGRLGYG 343
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+T G+++++G+N GQLG G T+ +P + L + ++ AA
Sbjct: 203 ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 262
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++ G+VYA+G+ G +G + + PQ VE L ++Q + G +
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV-PQKVELLAGEDIIQVSCGGTHSV 321
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR++++ G+ RLG+
Sbjct: 322 ALTRDGRMFSYGRGDHGRLGY 342
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
AV + G G G+LG G +E R + L + VV AG+ ++ + DGR+ TWG
Sbjct: 12 AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVV--AGSRNSLAICADGRLFTWG 69
Query: 387 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
W + G LGH E + ES P V AL V + A G + V + G Y++G E
Sbjct: 70 WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129
Query: 446 GHNAIADGQGNR--------------------------HANVLT----------PQLVTS 469
G A G R H+ VLT P
Sbjct: 130 GEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGD 189
Query: 470 LKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
+KQ++ RV + I A H ALTE G L+A+G + GQLG + R P
Sbjct: 190 IKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TGDTQPRSQP 246
Query: 527 ERVD 530
RV+
Sbjct: 247 IRVE 250
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 155/293 (52%), Gaps = 40/293 (13%)
Query: 231 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G+ G K V P L ++ V Q A +LSR GRVYT ++ +DA
Sbjct: 429 WGLIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDA------ 482
Query: 288 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ P L+ L + +V+IAA G+ Y LALA VYS GCG GG+LGHG
Sbjct: 483 ----LAPQ-LVQGLVSRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDT 533
Query: 345 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+ P+LI F + + V +A G+ ++A + +G + TWG G YG LGHG+ E E+
Sbjct: 534 VPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 593
Query: 403 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+P +V L +K I VA +GD T V+E+G V+S+G G+ LG +DG
Sbjct: 594 IPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG------- 645
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP+LV L+ ++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 646 CKTPKLVEKLQDLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVESL--K 249
L + + Q A R +++S +G+VY A+ D+ +PQLV+ L +
Sbjct: 449 LASLGVSQIACAEKRFLILSRSGRVYTQAYSSDAL--------------APQLVQGLVSR 494
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 306
NI + A L+ G VY++ G+ RLGH EP G V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L + V
Sbjct: 555 VHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+G V ++G+V +WG G YG LG G + PK+V+ L D+ + V G +
Sbjct: 612 GSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG VYS+G G++ LGH +V P+L+ L+ ++V+ ++ ++
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDVAAGST- 720
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQ 511
H ALTE +++++G+ D+ Q
Sbjct: 721 ----HCLALTEDSEVHSWGSNDQCQ 741
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 116/185 (62%), Gaps = 9/185 (4%)
Query: 141 ACCRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
A C ++ Q + G +S A+T++G +Y++G + G+LGHG++E+E P + L+G
Sbjct: 544 AFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG 603
Query: 197 IRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
+++I A G+G +T+ +++ GQV+++G +G + G G+ +P+LVE L+++ VV
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKLVEKLQDLDVV 661
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ G+ F+ L+++G+VY++ G++ RLGH TE + P LL L+ V+ +AAG
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEGLQGKKVIDVAAGST 720
Query: 315 YLLAL 319
+ LAL
Sbjct: 721 HCLAL 725
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL----QGIRIIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G R++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P + L+ + +A G +F S
Sbjct: 736 ------SNDQCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWS 778
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S+A+T G VYS+G + +LGHGT E P+ + LQG ++I AAG+ + +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 213 SDAGQVYAFGKD 224
++ +V+++G +
Sbjct: 726 TEDSEVHSWGSN 737
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 159/336 (47%), Gaps = 33/336 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++AVT G V S+G + GQLG G ++ P +++L R+ A G T ++
Sbjct: 78 GGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVV 137
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D G V +GK + G+ G + L+ P+ V +L N + Q A G T LS G +
Sbjct: 138 TDVGLVMCWGKGNSGQLGQGDWTSSLL--PRTVSTLYNEKIRQIACGMAHTLALSVNGEI 195
Query: 273 YTFSWGNDARLG---HHTEPNDV-EPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 327
Y++ G D +LG H E DV P + + E + + +C + C+
Sbjct: 196 YSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCR----- 250
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
++S G G G+LG G P ++ + + NL+ VAAG H AV+ +G + T G
Sbjct: 251 LFSWGLGADGRLGLGDSESRFSPTVVRR-SIENLRICYVAAGGHHTAVLSDNGEIFTCGR 309
Query: 388 GRYGCLGHGNEECESVPKVVQA------------LNDVKAIHVATGDYTTFVVSEDGDVY 435
G YG LGHG+ + + K +A L D K I A GD T V+S G+V+
Sbjct: 310 GSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVF 369
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
++G E LG G AN +P +TSL+
Sbjct: 370 AWGAAEDGQLGTG------GTEGAN--SPVELTSLR 397
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 41/364 (11%)
Query: 175 GQLGHGTTEEEWRPRPIR-----------------SLQGIRIIQAAAGAGRTMLISDAGQ 217
G+LGHG T + P+ +R SL G I A G T+ +++ G+
Sbjct: 33 GRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGA--IYVACGGHHTVAVTEDGE 90
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V ++G + E + G T P +V++L N V A G + TAV++ G V +
Sbjct: 91 VVSWGWGN--EGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGK 148
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
GN +LG + + P + TL N + QIA G + LAL+ +YS G G G
Sbjct: 149 GNSGQLGQGDWTSSLLPRTV-STLYNEKIRQIACGMAHTLALSVNGE---IYSWGAGADG 204
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+LG G +E Q ++ + +A G+ H + D R+ +WG G G LG
Sbjct: 205 QLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGL 264
Query: 396 GNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G+ E P VV+ ++ +++ +VA G + T V+S++G++++ G G LGH AD Q
Sbjct: 265 GDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGD-ADPQ 323
Query: 455 GNRHANVLTPQLVTSLKQ--VNERVVQI---SLTNSIYWNAHTFALTESGKLYAFGAGDK 509
LT + +L+ + +VQ+ + + + HT ++ +G+++A+GA +
Sbjct: 324 -------LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAED 376
Query: 510 GQLG 513
GQLG
Sbjct: 377 GQLG 380
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 31/216 (14%)
Query: 332 GCGLGGKLGHG---SRTDEKHPRLIEQF-----------QLLNLQPVVVAAGAWHAAVVG 377
G G G+LGHG S+ + K R ++F + LN + VA G H V
Sbjct: 28 GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLN-GAIYVACGGHHTVAVT 86
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+DG V +WGWG G LG GN ++VP VV+AL++ + VA G Y T VV++ G V +
Sbjct: 87 EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCW 146
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G S L GQG+ +++L P+ V++L NE++ QI+ AHT AL+
Sbjct: 147 GKGNSGQL-------GQGDWTSSLL-PRTVSTL--YNEKIRQIACG-----MAHTLALSV 191
Query: 498 SGKLYAFGAGDKGQLGIELVNNQT-ERGNPERVDID 532
+G++Y++GAG GQLG+ +T + P++V +D
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVD 227
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 32/259 (12%)
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV---------------VQIAAGYCY 315
R WG RLGH + +EP L + PV + +A G +
Sbjct: 23 RTSLQGWGEFGRLGHGDTLSQLEPKRLRFD-KRFPVSLSFTALAHESLNGAIYVACGGHH 81
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+A+ V S G G G+LG G+ D+ P +++ L N + VA G +H AV
Sbjct: 82 TVAVT---EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRVCGVACGYYHTAV 136
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
V G V WG G G LG G+ +P+ V L + K +A G T +S +G++Y
Sbjct: 137 VTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIY 196
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
S+G G LG + Q A+V TPQ V ++ + + H A+
Sbjct: 197 SWGAGADGQLG---VGKHQ-EETADVATPQKVRVDEEEKFEFIACG-------SRHCMAI 245
Query: 496 TESGKLYAFGAGDKGQLGI 514
T+ +L+++G G G+LG+
Sbjct: 246 TDDCRLFSWGLGADGRLGL 264
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAA 204
Q G H++A++ G +YS+G+ + GQLG G +EE P+ +R + + A
Sbjct: 178 QIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIAC 237
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-ESLKNIFVVQAAIGNFFT 263
G+ M I+D +++++G + G G ++ SP +V S++N+ + A G T
Sbjct: 238 GSRHCMAITDDCRLFSWGLGADGRLGLGDSESRF--SPTVVRRSIENLRICYVAAGGHHT 295
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT---------------LENIPVVQ 308
AVLS G ++T G+ +LGH D +P L L + +++
Sbjct: 296 AVLSDNGEIFTCGRGSYGQLGH----GDADPQLTLKKARALRHGCLLLHIVQLRDKKIIK 351
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 366
A G + L ++ + V++ G G+LG G P +L +L+ +V V
Sbjct: 352 AACGDTHTLVIS---TAGEVFAWGAAEDGQLGTGGTEGANSP-----VELTSLRGLVGDV 403
Query: 367 AAGAWHAAVV 376
+ G H+A V
Sbjct: 404 SCGLVHSAAV 413
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 126 bits (317), Expect = 2e-26, Method: Composition-based stats.
Identities = 110/372 (29%), Positives = 176/372 (47%), Gaps = 38/372 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q + P S ++ K Y++GSNSS QL G ++ P+ + + IQ AG
Sbjct: 324 QHLGSPNDSSSL--KHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNA--IQLEAGQYC 379
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIG-NFFT 263
T + D G ++A GK S G+ G +K Q + L +NI + ++ G + T
Sbjct: 380 TFALFDDGSLHACGKGSHGKLGLGDSSSK-----QCLHKLNLFNQNIDQISSSKGSDSHT 434
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L++ G VY++ G +LGH P + G +N + I+AG + A+
Sbjct: 435 LALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDG 494
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG-RV 382
+Y+ G G G+LGHG + ++ P L+ + VAAG H V+ +D V
Sbjct: 495 D---LYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQ----VAAGCSHTVVLSKDEMTV 547
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
T+G G G LGHGN + E PK+V AL ++ +A G + ++ G +Y +GCG
Sbjct: 548 WTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC 607
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
G G A L P++V SL+ V+ +V ISL + H AL+ ++Y
Sbjct: 608 L---------GVGAADAVHLLPKIVESLRDVH--IVDISLG-----DCHCLALSADHEVY 651
Query: 503 AFGAGDKGQLGI 514
++G + GQ G+
Sbjct: 652 SWGNNNMGQCGL 663
Score = 99.8 bits (247), Expect = 3e-18, Method: Composition-based stats.
Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 22/286 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGA 206
S + H++A+T GVVYS+G G+LGHG + P+ IR + +II +AG+
Sbjct: 425 SSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGS 484
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ I+ G +Y +G+ G +G + V P LV S+ Q A G T VL
Sbjct: 485 RHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRV--PTLVRSIDA--ASQVAAGCSHTVVL 540
Query: 267 SR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
S+ E V+TF G++ +LGH + P ++ L+ I + +IAAG +AL +G
Sbjct: 541 SKDEMTVWTFGAGDNGKLGHGNTKMEYYPK-IVDALKGIRIKKIAAGTQCSIALTW--TG 597
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y GC G LG G+ D H P+++E L ++ V ++ G H + D V
Sbjct: 598 F-IYVWGC--GPCLGVGA-ADAVHLLPKIVE--SLRDVHIVDISLGDCHCLALSADHEVY 651
Query: 384 TWGWGRYGCLGHGNEEC---ESVPKVVQALNDVKAIHVATGDYTTF 426
+WG G G G+ C S+P V AL+ +K ++TG +F
Sbjct: 652 SWGNNNMGQCGLGH--CFTPVSLPTKVLALDGIKIEQISTGTSHSF 695
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+IIQ A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+IIQ A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+IIQ A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH E +P I +L I+ A
Sbjct: 488 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 545
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQ++++G S G + G+ T+ V P+L++ L ++Q + GN+
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDG--QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 603
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 604 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQ-RVRSLEGIPLAQVAAGGAHSFALSL- 661
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 662 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 716
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 717 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776
Query: 441 ESASLG 446
LG
Sbjct: 777 ARGQLG 782
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
RTML +G S G+ +V PQ+ + + V + A G + L
Sbjct: 453 RTML--------CWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL 504
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G VYT +LGH E N E +G L + +V +A G + LAL+ +
Sbjct: 505 EDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ--- 558
Query: 328 VYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
++S G G G+LG + D PRLI++ LN Q ++ V+ G WH + DG+ TW
Sbjct: 559 LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTW 615
Query: 386 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G +G LG G E ++ P+ V++L + VA G +F +S G V+ +G +
Sbjct: 616 GKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 675
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG + D + H +L Q +VV IS HT LT+SG ++ F
Sbjct: 676 LGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTF 720
Query: 505 GAGDKGQLGIELVNNQTERGNPERV 529
GAG GQLG + +N++ NP RV
Sbjct: 721 GAGSCGQLGHDSMNDEV---NPRRV 742
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 32/320 (10%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 545
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605
Query: 319 LACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
LA + ++ G G+LG G S+T + R +E L VAAG H+
Sbjct: 606 LA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSF 657
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V
Sbjct: 658 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
++FG G LGH+++ D R L+ + V QI+ HT A
Sbjct: 718 FTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLA 762
Query: 495 LT-ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 763 FVPSSGLIYAFGCGARGQLG 782
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 595 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 654
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 713 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 769
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 770 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 798
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 127/255 (49%), Gaps = 12/255 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 605
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 606 LAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 664
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 665 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 720
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 721 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 778
Query: 391 GCLGHG---NEECES 402
G LG G N +C S
Sbjct: 779 GQLGTGHTCNVKCPS 793
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 706
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 707 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 764
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 765 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 797
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+IIQ A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+IIQ A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 159/311 (51%), Gaps = 26/311 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGA 206
S +AG +S+A+ G ++++G N G LGH T+ E P P+ +L G++I+QAA G
Sbjct: 44 SAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGG 103
Query: 207 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAI 258
+ + D G+ YA+G + +G E E GT+ + +PQ +LK + V Q A
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRC-ALK-LKVQQVAA 161
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 317
G + VL++EG V+T+ G P D++ ++ + V+ IA G + L
Sbjct: 162 GGTHSVVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNL 213
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL+ +++ G G+LG G P +E L+L V +AAG WH+ +
Sbjct: 214 ALS---EDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSL--VDIAAGGWHSTALT 268
Query: 378 QDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG V WG G +G LG G+++ VP VQ L+ + V+ G + ++ DG ++S
Sbjct: 269 KDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFS 328
Query: 437 FGCGESASLGH 447
+G G+ LG+
Sbjct: 329 YGRGDHGRLGY 339
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 181/379 (47%), Gaps = 44/379 (11%)
Query: 166 VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V ++GS GQLG G E++W R + +L + AG+ ++ I D G+++ +G +
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDWAHR-VAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWN 68
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
G + + TK +SP VE+L + +VQAAIG + + +GR Y +WG +
Sbjct: 69 QRGTLGHPPE-TKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAY--AWGGNEYGQ 125
Query: 285 HHTEPNDVE----------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
EP E P P L+ + V Q+AAG + + L + V++
Sbjct: 126 CGEEPERKEDGTRALRRDIPTPQRCALK-LKVQQVAAGGTHSVVLTQEGH---VWT---- 177
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G G P ++ + + +++A GA+H + +D + WG YG LG
Sbjct: 178 WGQPWPPGDIKQISTPVRVQGLEKV----MMIAVGAFHNLALSEDAVLWAWGNNEYGQLG 233
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G+ + S P V+ L+ + + +A G + + +++DG+VY++G GE LG
Sbjct: 234 IGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGF------- 286
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
G+ ++ + P V L E +VQ+S + H+ ALT G+++++G GD G+LG
Sbjct: 287 GDDKSSHMVPLKVQLLD--GEDIVQVSCGGT-----HSVALTSDGRIFSYGRGDHGRLGY 339
Query: 515 ELVNNQTERGNPERVDIDL 533
+ G+P V ++L
Sbjct: 340 ---GRKVTTGHPMEVPLNL 355
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A++ V++++G+N GQLG G T+ +P + L G+ ++ AAG + ++
Sbjct: 211 HNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKD 270
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VYA+G+ G +G + + P V+ L +VQ + G + L+ +GR++++
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMV-PLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSY 329
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
G+ RLG+ + HP+ L N+P + +AG
Sbjct: 330 GRGDHGRLGYGRKVT--TGHPMEVPL-NLPPPKTSAG 363
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G D+ G+ G+ GT + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E L+ +L IP Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 347 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G ++ GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G + K +SPQL++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG + N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 347 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+++ P +I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +H+ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
LVT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 LVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G + G+ G+ GT + + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V FSWG + LG+ + + PH ++ +L IP QIAAG + L SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-A 210
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
++ G G+LG D P L++ L Q VV + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH + E P+ V L + G +TT V G +YSFG G + L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Query: 446 G 446
G
Sbjct: 328 G 328
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G + GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ +G+ G + K SP +++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + + ND LL +L VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + V P L++SL+ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + ++ V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4057 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4109
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4110 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWSI--PTLLGSLQHVFVKKVAVNSGGK 4167
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ +G VY + G D +LGH + P LL L + V IA G + A+
Sbjct: 4168 HCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPK-LLEHLNGMSVADIACGSAHSAAITA 4226
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4227 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4281
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++G
Sbjct: 4282 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK 4341
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A +++G
Sbjct: 4342 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAG 4386
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 4387 EVYTWGDNDEGQLG 4400
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 161/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ V S+ G V++ G ++G+LG G T P P+ ++ + +G
Sbjct: 2950 IAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3009
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3010 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3067
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3068 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALCGSRVIQVACGSRDAQTLALTEDG-A 3125
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 3126 VFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 3183
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 3184 GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3240
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
G GN N P LV L V V ++S+ W
Sbjct: 3241 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSMAW 3276
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P +++ +R I A G+ ++S G+V+A G+
Sbjct: 2913 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEG 2972
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 2973 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3030
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P L+ L + IA G + A++ Q +Y+ G G G+LGHG
Sbjct: 3031 LGHGNRTTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3086
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3087 DNATQLKPKLVTA--LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3144
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ P ++ L+ + + + G + ++ G+V+++G G+ LGH G++H
Sbjct: 3145 SATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3196
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3197 VRKPQPIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3242
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4107 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGG 4166
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+L+E L + V A G+ +A +
Sbjct: 4167 KHCLALTTDGEVYAWGEGEDGKLGHGNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAI 4224
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4225 TASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4282
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4283 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWG 4340
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 4341 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4400
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4401 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4437
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 142/327 (43%), Gaps = 49/327 (14%)
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---------SPQLVESLKNIFVVQAAI 258
RT+L + +VYA G + + + G ++ P L+ V Q A
Sbjct: 547 RTLL--EQQRVYALGWPTLSKEQQGFNVEPALSWTSASTQRPPPALLNC--KFHVKQVAC 602
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLL 317
+LS+EG++Y + H D EP PL G + + + IA+ +C
Sbjct: 603 SKDIVLLLSKEGKLYNW----------HISKPDTEPQPLDFGDIGSETFISIAS-HCEGR 651
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+ YS G G +LGHG + P IE L + V G ++A +
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIES---LVRRVKSVYCGCSYSAAIT 708
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVY 435
G + TWG G YG LGHG + + +P +V AL D + + VA +GD T ++ +G VY
Sbjct: 709 LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G+ LG NA + L P L+ L +V +RV S + AL
Sbjct: 769 AWGDGDYGKLG-NASCNSS-------LQPLLIECLPRV-QRVFAGS--------QFSLAL 811
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTE 522
T G+LY++G LG +LV +
Sbjct: 812 TGEGQLYSWGKASC--LGHQLVERNVQ 836
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E+ RR S G +S A+T +G +Y++G + G+LGHG ++++ P + +L+ ++
Sbjct: 688 ESLVRRVKS-VYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQV 746
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A G+G T+ +++ G VYA+G +G + G P L+E L + V A
Sbjct: 747 VDVALGSGDAHTLCLTNEGLVYAWGDGDYG--KLGNASCNSSLQPLLIECLPRVQRVFA- 803
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 313
G+ F+ L+ EG++Y SWG + LGH +V+ P L+ +L++ +V +A G
Sbjct: 804 -GSQFSLALTGEGQLY--SWGKASCLGHQLVERNVQGCSVPR-LITSLQHKRIVDVAVGV 859
Query: 314 CYLLALA 320
+ LAL+
Sbjct: 860 THCLALS 866
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +AV + YS+G+ + +LGHG P I SL R+ G + I+
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAAITLR 710
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G +Y +G+ ++G +G+ + + P +V +LK+ VV A+ G+ T L+ EG VY
Sbjct: 711 GNLYTWGRGNYGRLGHGISDDQCL--PTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 332
+ G+ +LG+ + + ++ PLL +E +P VQ + AG + LAL + +
Sbjct: 769 AWGDGDYGKLGNASCNSSLQ--PLL--IECLPRVQRVFAGSQFSLALTGEGQLYSWGKAS 824
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
C LG +L + PRLI Q + + V VA G H + G + +GWGR
Sbjct: 825 C-LGHQLVERNVQGCSVPRLITSLQ--HKRIVDVAVGVTHCLALSSAGEI--FGWGR 876
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3161 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALH 3220
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 3221 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 3270
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
LV +K+++ G ++A ++ G +YT+ GN RLGH + P ++ L++
Sbjct: 690 LVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLP-TMVMALKD 743
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
VV +A G L G+ VY+ G G GKLG+ S P LIE +
Sbjct: 744 HQVVDVALGSGDAHTLCLTNEGL-VYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ--- 799
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAIHVA 419
V AG+ + + +G++ + WG+ CLGH N + SVP+++ +L + + VA
Sbjct: 800 -RVFAGSQFSLALTGEGQL--YSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVA 856
Query: 420 TGDYTTFVVSEDGDVYSFG 438
G +S G+++ +G
Sbjct: 857 VGVTHCLALSSAGEIFGWG 875
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + FVVS+DG V++ G G
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 2974 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3020
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 3021 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3046
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIR 198
C + AG S+A+T +G +YS+G S LGH E + PR I SLQ R
Sbjct: 794 CLPRVQRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKR 851
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGE-------AEYGVQGTKLVTSPQLVESLKNI 251
I+ A G + +S AG+++ +G++ + +E ++ LVT P L S
Sbjct: 852 IVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASVCSEPLLRQPILVTLPTLPASGMAC 911
Query: 252 FVVQAAI 258
VQ+ I
Sbjct: 912 TAVQSLI 918
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G D+ G+ G+ GT + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E L+ +L IP Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 347 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G ++ GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G + K +SPQL++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG + N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I ++Q A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I ++Q+A GY + LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+IIQ A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG GT ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 347 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+++ P +I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +H+ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
LVT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 LVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G + G+ G+ GT + + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V FSWG + LG+ + + PH ++ +L IP QIAAG + L SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-A 210
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
++ G G+LG D P L++ L Q VV + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH + E P+ V L + G +TT V G +YSFG G + L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Query: 446 G 446
G
Sbjct: 328 G 328
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G + GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ +G+ G + K SP +++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + + ND LL +L VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + V P L++SL+ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + ++ V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 7 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 66
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 67 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 122
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 123 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 182
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 183 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 238
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 239 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 295
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 296 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 332
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
RTML +G S G+ +V PQ+ + + V + A G + L
Sbjct: 3 RTML--------CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL 54
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G VYT +LGH E N E +G L + ++ +A G + LAL+ +
Sbjct: 55 EDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ--- 108
Query: 328 VYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
++S G G G+LG + D PRLI++ LN Q ++ V+ G WH + DG+ TW
Sbjct: 109 LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTW 165
Query: 386 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G +G LG G E ++ P+ V++L + VA G +F +S G V+ +G +
Sbjct: 166 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 225
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG + D + H +L Q +VV IS HT LT+SG ++ F
Sbjct: 226 LGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTF 270
Query: 505 GAGDKGQLGIELVNNQTERGNPERV 529
GAG GQLG + +N++ NP RV
Sbjct: 271 GAGSCGQLGHDSMNDEV---NPRRV 292
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 40 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 95
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 96 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 156 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 210
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 271 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 315
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 316 SSGLIYAFGCGARGQLG 332
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 145 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 204
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 205 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 319
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 320 IYAFGCGARGQLGTGHTCNVKCP 342
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 96 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 156 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 214
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 215 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 269
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 270 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 328 RGQLGTGHTCNVKCPSPVK 346
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 197 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 256
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 257 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 314
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 315 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 347
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 154/299 (51%), Gaps = 19/299 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ +TS V+++G N++GQLG GTT P P + L + Q +AG ++
Sbjct: 77 AGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLA 134
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSRE 269
++D G+V+A+G +S G+ G T +P V+ L + V AA GN A L+ +
Sbjct: 135 LTDDGRVFAWGLNSSGQLGDGT--TADSRTPVQVQGLATDSTIKVVAAGGNHSLA-LTSD 191
Query: 270 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
GRV F+WG ++ +LG+++ + P + G N V +AAG + LAL S
Sbjct: 192 GRV--FAWGKNSSGQLGNNSTVDSSIPVQVQGLPAN--VTAVAAGGNHSLALT---SDGR 244
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+Y+ G G+LG G+ ++ P L+ +PV V+AG H+ + QDG V WG
Sbjct: 245 IYAWGLNSSGQLGDGTTSNSSTPVLVAGLPA-GSKPVAVSAGKDHSLALMQDGTVYAWGG 303
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG+G +P V L +V A+ D + ++ DG VY++G S LG
Sbjct: 304 NSYGQLGNGTTTASEMPVQVTGLANVTAVSAGGSD--SLALTSDGYVYAWGLNSSGQLG 360
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 127/258 (49%), Gaps = 11/258 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGA 206
+Q AG HS+A+T G V+++G NSSGQLG GTT + P ++ L I+ AAG
Sbjct: 123 AQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGG 182
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ ++ G+V+A+GK+S G + G T + P V+ L AA GN A L
Sbjct: 183 NHSLALTSDGRVFAWGKNSSG--QLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLA-L 239
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +GR+Y + + +LG T N P + G V ++AG + LAL +
Sbjct: 240 TSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT-- 297
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VY+ G G+LG+G+ T + P ++ L N+ V+AG + + DG V WG
Sbjct: 298 -VYAWGGNSYGQLGNGTTTASEMP--VQVTGLANV--TAVSAGGSDSLALTSDGYVYAWG 352
Query: 387 WGRYGCLGHGNEECESVP 404
G LG G + P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 144/328 (43%), Gaps = 31/328 (9%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+AG +++++ V+A+G ++ G+ G + +P + L + V Q + G
Sbjct: 76 SAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTP--AQGLPS--VAQVSAGESH 131
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ L+ +GRV+ + + +LG T + P + G + + +AAG + LAL
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALT-- 189
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S V++ G G+LG+ S D P Q Q L VAAG H+ + DGR+
Sbjct: 190 -SDGRVFAWGKNSSGQLGNNSTVDSSIPV---QVQGLPANVTAVAAGGNHSLALTSDGRI 245
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
WG G LG G S P +V L K + V+ G + + +DG VY++G
Sbjct: 246 YAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS 305
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LG+ G A+ + P VT L V +S S + ALT G +
Sbjct: 306 YGQLGN-------GTTTASEM-PVQVTGLANVTA----VSAGGS-----DSLALTSDGYV 348
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
YA+G GQLG +N R P RV
Sbjct: 349 YAWGLNSSGQLGDGTTSN---RNTPVRV 373
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 366
++AG + L L S V++ G G+LG G+ T + P + P V V
Sbjct: 75 VSAGGSHSLVLT---SDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGL------PSVAQV 125
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV-ATGDYTT 425
+AG H+ + DGRV WG G LG G P VQ L I V A G +
Sbjct: 126 SAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHS 185
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
++ DG V+++G S LG+N+ D S V + + ++T
Sbjct: 186 LALTSDGRVFAWGKNSSGQLGNNSTVD----------------SSIPVQVQGLPANVTAV 229
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
H+ ALT G++YA+G GQLG +N +
Sbjct: 230 AAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSS 265
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR RI G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 347 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+++ P +I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +H+ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
LVT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 LVT----------QITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G + G+ G+ GT + + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V FSWG + LG+ + + PH ++ +L IP QIAAG + L SG A
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-A 210
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
++ G G+LG D P L++ L Q VV + G H A + ++G V T+G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH + E P+ V L + G +TT V G +YSFG G + L
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQL 327
Query: 446 G 446
G
Sbjct: 328 G 328
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G + GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ +G+ G + K SP +++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + + ND LL +L VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + V P L++SL+ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + ++ V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G D+ G+ G+ GT + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E L+ +L IP Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 449 AIAD 452
+ ++
Sbjct: 331 STSN 334
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQIA GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS---KGSEVFSWGQNKHGQLGLGFELK 176
Query: 347 -EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 RQSSPQLIKS--LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G ++ GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G + K +SPQL++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFE-LKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRFVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G + + P+ I+SL GI Q AAG
Sbjct: 141 QIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 193 TQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG + N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 166/337 (49%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 TTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ ++G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LTTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT++G ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKNGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V++++G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 12/258 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT---KNGGVFTF 266
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 391 GCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L LR ++A C R + G H + + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L II A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 TSPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 146/312 (46%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ G +V PQ + + V + A G L +G VYT
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + ++ +A G + LAL+ Q ++S G G G+LG
Sbjct: 64 GQLGHEREGNQPEQ---IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 32/320 (10%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G + + + G+VY G ++ G+ + +G + P+ + +L + ++ A
Sbjct: 36 VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
LA + ++ G G+LG G S+T + R +E L VAAG H+
Sbjct: 152 LA---TDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSF 203
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
++FG G LGH+++ D R L+ + V QI+ HT A
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLA 308
Query: 495 LT-ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 309 FVPSSGLIYAFGCGARGQLG 328
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LATDGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 391 GCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 YPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G KGQLG
Sbjct: 312 SSGLIYAFGCGAKGQLG 328
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGAKGQLGTGHTCNVKCPSPVKGY 344
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 129/263 (49%), Gaps = 22/263 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ GQ + +GK+S G+ EY Q SPQ V SL+ I + Q A G + LS
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQA-----SPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G V+ + N +LG E + P H L L VV I+ G + L SG
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG- 261
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 385
V++ G G G+LGH S DE +PR + +L+ + +A G H A V G + +
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 386 GWGRYGCLGHG---NEECESVPK 405
G G G LG G N +C S K
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 21/297 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ AVT+ G +Y++G ++++G LGHG+ W P+ + L G+ +
Sbjct: 316 NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAV 375
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G T LI+ +GQ+Y FG +FG +G + + + P+ VESLK + + + G +
Sbjct: 376 SCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRTISVSCGVWH 433
Query: 263 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
TA + + G+++T+ G+ RLGH + ++P + +L + + A G+
Sbjct: 434 TAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAACGH 492
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ L + +++VG + G+LG+ + D ++PRL+E+ QL V VA G++H
Sbjct: 493 TLTIGLT---TSGHIFTVGSPVYGQLGNPN-NDGRYPRLVEE-QLGGGGVVEVACGSYHV 547
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
AV+ G V TWG G G LGHG+ VP +V+AL D VA G T + +
Sbjct: 548 AVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAICQ 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 33/345 (9%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GTT + P+P+ S + + A G L++ +V+ +G++ G +G+ GT V
Sbjct: 246 GTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGI-GTN-V 303
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPL 297
P+LVESL V A G F T ++ G +YT+ G N LGH + + P +
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV 363
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G L+ +PV ++ G + + S +Y+ G G G LGHG+R +P+ +E
Sbjct: 364 SGPLDGLPVSAVSCGTWHTALIT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVE--S 418
Query: 358 LLNLQPVVVAAGAWHAAVV---------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
L L+ + V+ G WH A V G++ TWG G LGHG+ + P V
Sbjct: 419 LKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVP 478
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
+L D A G T ++ G +++ G LG N DG R+ ++ QL
Sbjct: 479 SLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLG-NPNNDG---RYPRLVEEQLGG 534
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VV+++ + H LT +G++Y +G G G+LG
Sbjct: 535 G------GVVEVACG-----SYHVAVLTNAGEVYTWGKGTNGRLG 568
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 139/317 (43%), Gaps = 39/317 (12%)
Query: 216 GQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
G +Y +G + + Y T V P+ +ES + V A G A+++
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
R+ V F+WG + RLGH N +P L+ +L V IA G + A+
Sbjct: 280 RQAEV--FTWGEECSGRLGHGIGTNVFQPR-LVESLSTCNVELIACGEFHTCAVTAT-GD 335
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+ + G G LGHGS P+ + L L V+ G WH A++ G++ T+
Sbjct: 336 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLDGLPVSAVSCGTWHTALITSSGQLYTF 394
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYS 436
G G +G LGHGN S PK V++L ++ I V+ G + T V E G +++
Sbjct: 395 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 454
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G G+ LGH G+R + L P V SL + + + + T LT
Sbjct: 455 WGDGDKYRLGH-------GDRSSK-LKPTCVPSL-------IDYNFHKAACGHTLTIGLT 499
Query: 497 ESGKLYAFGAGDKGQLG 513
SG ++ G+ GQLG
Sbjct: 500 TSGHIFTVGSPVYGQLG 516
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 150/291 (51%), Gaps = 25/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G +++ G LGHG + W P+ + L+G+R+ A G T
Sbjct: 183 GEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHT 242
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
+L++ GQ+++FG +FG +G + K + P+ VESLK + ++AA G + TA V
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEV 300
Query: 266 LSR--------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+SR G+++T+ G+ RLGH + + P + L + Q+A G+ +
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAALVDHNFRQVACGHSLTV 359
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + +Y++G G+LG T RL +L V+ GA+H A +
Sbjct: 360 ALT---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRTLIEEVSCGAYHVAALT 412
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G VCTWG G G LGHG+ E VP +V+AL D + V+ G T +
Sbjct: 413 SKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR +RSL + + Q A G T L++ G+V+++G++S G +GV V PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + V A G + + +++ G +YT+ G N LGH + P + G LE +
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR 231
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A G + + + S ++S G G G LGHG R PR +E L L+ +
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G LGHG++E + VP V AL D
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T ++ G +Y+ G S+ + + D Q T +L L+
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMG-----SVSYGQLGDPQA-------TGRLPGVLRLG 394
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++S Y H ALT G + +G G G+LG
Sbjct: 395 RTLIEEVSC--GAY---HVAALTSKGDVCTWGKGANGRLG 429
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 20/229 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H++ VTS G ++SFG + G LGHG + PR + SL+G++ ++AA G
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292
Query: 208 RTMLI------------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + S +G+++ +G +G + KLV P V +L + Q
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQ 350
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G +YT + +LG +P P + L + +++ G +
Sbjct: 351 VACGHSLTVALTTTGHLYTMGSVSYGQLG---DPQATGRLPGVLRLGRTLIEEVSCGAYH 407
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+ AL S V + G G G+LGHG D P L+E + ++ V
Sbjct: 408 VAALT---SKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKV 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 17/189 (8%)
Query: 328 VYSVGCGLGG---KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
++ G G GG KL RTD PR + +L++Q + A G H A+V + G V +
Sbjct: 89 MWGEGIGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQI--ACGVRHTALVTRQGEVFS 146
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LGHG + + P+++ +L +VA G+Y + V++ GD+Y++G G
Sbjct: 147 WGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT--- 203
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
HN G GN ++ TP+ V + V++S W HT +T +G+L++F
Sbjct: 204 --HNFGLLGHGNSISH-WTPKRVGGPLE----GVRVSSVACGPW--HTVLVTSTGQLFSF 254
Query: 505 GAGDKGQLG 513
G G G LG
Sbjct: 255 GDGTFGVLG 263
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQ++++G S + + G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLS 208
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 209 G---AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 ARGQLG 328
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+ +G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G
Sbjct: 61 NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114
Query: 338 KLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+LG + D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 396 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G E ++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
H +L Q +VV IS HT LT+SG ++ FGAG GQLG
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 515 ELVNNQTERGNPERV 529
+ +N++ NP RV
Sbjct: 277 DSMNDEV---NPRRV 288
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D + P+ V L + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMND--------EVNPRRVLEL--MGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH E +P I +L II A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQ++++G S + + G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGS--DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLS 208
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 209 G---AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 ARGQLG 328
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+ +G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G
Sbjct: 61 NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114
Query: 338 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+LG + D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 396 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G E ++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
H +L Q +VV IS HT LT+SG ++ FGAG GQLG
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 515 ELVNNQTERGNPERV 529
+ +N++ NP RV
Sbjct: 277 DSMNDEV---NPRRV 288
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + ++ A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D + P+ V L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMND--------EVNPRRV--LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQ--LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDYKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYFPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 345
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYK 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E P
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ G+ P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVTVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G G+ G+ GT+ T P+ ++SL +I +VQ A G F + LS+
Sbjct: 100 NDKGQVYAWGFAVDGQL--GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E ++ +L IP QIAAG + L SG AV+
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL--SG-AVF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 30/357 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + + D +LG
Sbjct: 64 GQLGH----EKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS 119
Query: 287 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
TE P + +L +I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYTRVPRNI-KSLSDIQIVQVACGYFHSLALS---KGSEVFSWGQNKYGQLGLGYEY 175
Query: 346 DEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P++I+ LL + +AAG H+ V+ G V WG ++G LG +E VP
Sbjct: 176 KKQASPQIIKS--LLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVP 233
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
++++L K ++++ G+ T ++++G V++FG G LGHN+ A R L
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMG 293
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 520
+VT QI+ HT A S G++Y+FG G GQLG+ +N+
Sbjct: 294 NIVT----------QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGTTSNR 335
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 137/260 (52%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G GQLG TEE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ +G+ G + K SPQ+++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + E + P+ LL +L + +V I+ G + AL + V+
Sbjct: 211 V--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYISCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G P V+
Sbjct: 323 GNGQLGMGTTSNRKSPFPVK 342
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G V+ +G++ FG+ + + V P L++SL++ +V + G TA L+
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + NI V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGTTSNRKSP 338
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G V+ +G N GQLG + + P ++SL+ +I+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG T N P P+ G
Sbjct: 311 PSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKGN 344
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDYKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYFPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRT 345
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYK 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E P
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ G+ P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 82 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 141
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G + G+
Sbjct: 142 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGL 197
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 198 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 257
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 258 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 313
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 314 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 370
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 371 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 407
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 40/340 (11%)
Query: 195 QGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
Q IR+ A+G RTML +G S G+ +V PQ+ + +
Sbjct: 63 QWIRLWTLASGLDSIRTML--------CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRS 114
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
V + A G + L +G VYT +LGH E N E +G L + +V +A G
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIVHVACG 171
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGA 370
+ LAL+ + ++S G G G+LG + D PRLI++ LN Q ++ V+ G
Sbjct: 172 ESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGN 225
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
WH + DG+ TWG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 226 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 285
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
G V+ +G + LG + D + H +L Q +VV IS
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ----------KVVYISCGEE---- 331
Query: 490 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 332 -HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 367
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 170
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 231 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 285
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 346 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 390
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 391 SSGLIYAFGCGARGQLG 407
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 220 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 279
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 280 HSFALSLSGAVFGWGMNNAGQ--LGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 394
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 395 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 423
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 171 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 231 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 289
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 344
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 345 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 402
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 403 RGQLGTGHTCNVKCPSPVK 421
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 272 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 331
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 332 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 389
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 390 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 422
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 159/301 (52%), Gaps = 21/301 (6%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ A+T+ G +Y++G ++++G LGHG+ W P+ + L+G+++
Sbjct: 314 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 373
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G T LI+ +G++Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 374 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 431
Query: 263 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
TA + + G+++T+ G+ RLGH + ++P + +L + + G+
Sbjct: 432 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 490
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ L SG +++ G + G+LG+ D ++PRL+E+ +L V VA GA+H
Sbjct: 491 TLTIGLTT--SGH-IFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVACGAYHV 545
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
AV+ Q G V TWG G G LGHG+ P V+AL D +A G T + +
Sbjct: 546 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKS 605
Query: 434 V 434
V
Sbjct: 606 V 606
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 33/337 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + A G L++ +V+ +G++ G +G GT + P+LVES
Sbjct: 252 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 309
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 310 LSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL- 368
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q++A C A S +Y+ G G G LGHG+R +P+ +E L L+ +
Sbjct: 369 --QVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVES--LKGLRTIS 424
Query: 366 VAAGAWHAAVVGQ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
V+ G WH A V + G++ TWG G LGHG+ + P V +L D
Sbjct: 425 VSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH 484
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
G T ++ G +++ G LG N DG+ P+LV K
Sbjct: 485 KAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNNDGR--------YPRLVEE-KLGGGG 534
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VV+++ Y H LT+SG++Y +G G G+LG
Sbjct: 535 VVEVAC--GAY---HVAVLTQSGEVYTWGKGANGRLG 566
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 141/332 (42%), Gaps = 20/332 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ VT + V+++G SG+LGHG ++PR + SL + A G
Sbjct: 264 SYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEF 323
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVL 266
T I+ G +Y +G + G P+ V L+ + V + G + TA++
Sbjct: 324 HTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALI 383
Query: 267 SREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+ G++YTF G LGH P +VE L T+ V A ++
Sbjct: 384 TSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQS 443
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QD 379
S +++ G G +LGHG R+ + P + N V H +G
Sbjct: 444 NTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCG----HTLTIGLTTS 499
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G + T G YG LG+ N + V + L + VA G Y V+++ G+VY++G
Sbjct: 500 GHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGK 559
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G + LGH IAD + TP V +L+
Sbjct: 560 GANGRLGHGDIADRK--------TPTFVEALR 583
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 288
Y + P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 298
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ +P L+ +L V IA G + A+ + + G G LGHGS
Sbjct: 299 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 356
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
P+ + L LQ V+ G WH A++ G++ T+G G +G LGHGN E S PK V+
Sbjct: 357 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 415
Query: 409 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 459
+L ++ I V+ G + T V E G ++++G G+ LGH G+R +
Sbjct: 416 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH-------GDR-S 467
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ L P V SL + + ++ + T LT SG ++ G+ GQLG
Sbjct: 468 SKLKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG 514
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ + G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 172/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ++ GY + LAL+ V+S G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALS---KASEVFSWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 143/260 (55%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q + G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+++G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFSWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+S+G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 25/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G +++ G LGHG W P+ + L+G+R+ A G T
Sbjct: 183 GEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHT 242
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
+L++ GQ+++FG +FG +G + K + P+ VESLK + ++AA G + TA V
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEV 300
Query: 266 LSR--------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+SR G+++T+ G+ RLGH + + P + L + Q+A G+ +
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAALVDHNFRQVACGHSLTV 359
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + +Y++G G+LG T RL +L V+ GA+H A +
Sbjct: 360 ALT---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRTLIEEVSCGAYHVAALT 412
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G VCTWG G G LGHG+ E VP +V+AL D + V+ G T +
Sbjct: 413 SKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 157/340 (46%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR +RSL + + Q A G L++ G+V+++G++S G +GV V PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + V A G + + +++ G +YT+ G N LGH + P + G LE +
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVR 231
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A G + + + S ++S G G G LGHG R PR +E L L+ +
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G LGHG++E + VP V AL D
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T ++ G +Y+ G S+ + + D Q T +L L+
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMG-----SVSYGQLGDPQA-------TGRLPGVLRLG 394
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++S Y H ALT G + +G G G+LG
Sbjct: 395 RTLIEEVSC--GAY---HVAALTSKGDVCTWGKGANGRLG 429
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 20/229 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H++ VTS G ++SFG + G LGHG + PR + SL+G++ ++AA G
Sbjct: 233 SSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPW 292
Query: 208 RTMLI------------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + S +G+++ +G +G + KLV P V +L + Q
Sbjct: 293 HTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQ 350
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G +YT + +LG +P P + L + +++ G +
Sbjct: 351 VACGHSLTVALTTTGHLYTMGSVSYGQLG---DPQATGRLPGVLRLGRTLIEEVSCGAYH 407
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+ AL S V + G G G+LGHG D P L+E + ++ V
Sbjct: 408 VAALT---SKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKV 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
KL RTD PR + +L++Q + A G HAA+V + G V +WG G LGHG
Sbjct: 102 KLDTSFRTDAFLPRAVRSLVVLDVQQI--ACGVRHAALVTRQGEVFSWGEESGGRLGHGV 159
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ + P+++ +L +VA G+Y + V++ GD+Y++G G HN G GN
Sbjct: 160 DADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT-----HNFGLLGHGNN 214
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ TP+ V + V++S W HT +T +G+L++FG G G LG
Sbjct: 215 ISH-WTPKRVGGPLE----GVRVSSVACGPW--HTVLVTSTGQLFSFGDGTFGVLG 263
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH + E +P I +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPELIGALAGQHIVHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQV+++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 TRGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G SFG+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH +E + E L+G L +V +A G + +AL+ Q V+S G G G+LG
Sbjct: 64 GQLGHESEGSKPE---LIGALAGQHIVHVACGESHSVALSDQGQ---VFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ ++ G WH + DG+ TWG YG LG G E
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 175 CPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 28/349 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + +G+K P+L+ +L +V A G + LS +G+V+++ G+D +LG
Sbjct: 64 GQLGHESEGSK----PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLT 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 345
T + V L+ L ++QI+ G + LALA ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ---FFTWGQNSYGQLGLGKECP 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+ ++ + L V AAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D R
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
L+ + V QI+ HT A SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 16/257 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G V+S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG ++ +LG E D E + L + VV I+ G + L SG V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 389 RYGCLGHG---NEECES 402
G LG G N +C S
Sbjct: 323 TRGQLGTGHTCNVKCPS 339
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 167/341 (48%), Gaps = 27/341 (7%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
R N G HS+ + V + +G G+LG T +++P ++ R+ A+
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDV-FVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMAS 141
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG + +++ G VY +G +FG +G +L+ P+L+E +V + G T
Sbjct: 142 AGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELL--PRLLEGPWKDRIVHVSAGGSHT 199
Query: 264 AVLSREGRVYTFSWGND---ARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 316
A ++ G +YT WG D RLGH P+ ++ P ++P+ + G +
Sbjct: 200 AAVTESGELYT--WGRDEGEGRLGH-GNPDIMDEGALSRPTKVQALDVPIALVYCGGFFT 256
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL SG ++S G +LGHG+R + P+++ + + L V VA G +HAA +
Sbjct: 257 MALT--KSGQ-LWSWGGNANHELGHGTRANNWKPKVVAALEDVTL--VQVACGGFHAAAL 311
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
QDG+V TWG+G G LGHG E P +V+A+ D ++A G T ++E+GD+Y+
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYT 371
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
+G LG + D Q L P LV + ++E+
Sbjct: 372 WGKNRDYQLGIPGLKDEQ-------LDPVLVQFPQALHEKT 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 157/330 (47%), Gaps = 51/330 (15%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAI----------GN----- 260
+V+A+G+ + G+ +G + T+ + P L+ +LK F A I GN
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKL--PVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93
Query: 261 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLA 318
F +VL E V+ + G+ RLG TE N +P+ I VQ+A AG + +A
Sbjct: 94 GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPY----VNPRIKRVQMASAGGLHNIA 149
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + VY+ G G G LGHGS E PRL+E + V V+AG H A V +
Sbjct: 150 LTEVGN---VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRI--VHVSAGGSHTAAVTE 204
Query: 379 DGRVCTWGWGR-YGCLGHGN-----EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
G + TWG G LGHGN E S P VQAL DV V G + T +++ G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFFTMALTKSG 263
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++S+G + LGH G R AN P++V +L+ V +VQ++ H
Sbjct: 264 QLWSWGGNANHELGH-------GTR-ANNWKPKVVAALEDVT--LVQVACGGF-----HA 308
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTE 522
ALT+ GK+ +G G GQLG + N E
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKE 338
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 45/376 (11%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-----GIRIIQA-------------AAGAG 207
V+++G + GQ+GHG+ + E P I +L+ G+ IQ G
Sbjct: 37 VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLF 96
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++L ++ V+ +GK G G+ P + +K V A+ G L+
Sbjct: 97 HSVLFAEQ-DVFVWGKGDGGR--LGIDTEFNQYKPYVNPRIKR--VQMASAGGLHNIALT 151
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G VYT+ +G LGH + ++ P L G ++ +V ++AG + A+ SG
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHTAAVT--ESG-E 207
Query: 328 VYSVGCGLG-GKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
+Y+ G G G+LGHG+ DE + Q L++ +V G + + + G++ +
Sbjct: 208 LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWS 267
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG LGHG PKVV AL DV + VA G + +++DG V ++G G +
Sbjct: 268 WGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQ 327
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH + +G+ P +V E + + T A T A+TE+G LY +
Sbjct: 328 LGHGTLENGK--------EPAIV-------EAMADKTCTYIACGPAWTAAITENGDLYTW 372
Query: 505 GAGDKGQLGIELVNNQ 520
G QLGI + ++
Sbjct: 373 GKNRDYQLGIPGLKDE 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 44/236 (18%)
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 359
GY + +P+ + V++ G G G++GHGS EK P LI +L
Sbjct: 21 GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80
Query: 360 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
L V V G +H+ + + V WG G G LG E + P V + V+
Sbjct: 81 PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+ G ++E G+VY++G G +LGH + + L P+L+ +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS--------YERELLPRLLEG--PWKD 187
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD-KGQLGIELVNNQTERGNPERVD 530
R+V +S S HT A+TESG+LY +G + +G+LG GNP+ +D
Sbjct: 188 RIVHVSAGGS-----HTAAVTESGELYTWGRDEGEGRLG---------HGNPDIMD 229
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 23/290 (7%)
Query: 167 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG----RTMLISDAGQVYAFG 222
+S+G N+ G LG GTT+ P PI +LQG+ ++ A G G + +++ GQVY +G
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
G+ +G ++ + P+L+ L++ +V+ A G+ T V+S+ G V+ + WG+ +
Sbjct: 61 SGKSGQLGHG--DSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LG + N +P + +L+ + V ++A G + + SG VY+ G G+ G+LGHG
Sbjct: 119 LGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVT--ESGH-VYTWGWGVNGQLGHG 174
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-DGRVCTWGWGRYGCLGHGNEEC- 400
+ P +++ + + +A G H VV + D V +WGW YG LGHG +
Sbjct: 175 DDASQSRPMYVKKLHGIYVS--TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIF 232
Query: 401 ----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
P+ ++ L +A G T +S GDVY+FG G+ LG
Sbjct: 233 GGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 30/293 (10%)
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF----FTAVLSREGRVYTFSWGNDARL 283
+ G+ T V SP + +L+ + VV A G +A ++ +G+VYT+ G +L
Sbjct: 8 DGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQL 67
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH N V P ++G L++ P+V++A G + + ++ +G+ V++ G G G+LG GS
Sbjct: 68 GHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVS--KAGL-VFAWGWGHFGQLGVGS 123
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ P ++ L ++ VA G+ H AVV + G V TWGWG G LGHG++ +S
Sbjct: 124 THNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSR 181
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSE-DGDVYSFGCGESASLGHNA--IADGQGNRHAN 460
P V+ L+ + +A G T VVSE D V+S+G E LGH I G NR
Sbjct: 182 PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNR--- 238
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+P+ + L+Q+ +++T AL+ G +YAFG G GQLG
Sbjct: 239 --SPRPIKDLQQIACG------------SSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 125/244 (51%), Gaps = 17/244 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS AVT +G VY++GS SGQLGHG ++ PR I LQ I++ A G+ T+++S A
Sbjct: 46 HSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKA 105
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G FG + GV T P V SL + V + A G+ TAV++ G VYT+
Sbjct: 106 GLVFAWGWGHFG--QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTW 163
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
WG + +LGH + + P + L I V +A G + + ++ AV+S G
Sbjct: 164 GWGVNGQLGHGDDASQSRPM-YVKKLHGIYVSTLACGLAHTVVVS--EVDRAVFSWGWDE 220
Query: 336 GGKLGHGSR-----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G+LGHG + PR I+ Q +A G+ + + G V +GWG+
Sbjct: 221 YGQLGHGGWDIFGGNKNRSPRPIKDLQQ-------IACGSSYTLALSSRGDVYAFGWGKD 273
Query: 391 GCLG 394
G LG
Sbjct: 274 GQLG 277
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V+ G+V+++G GQLG G+T P + SL G+++ + A G+ T ++
Sbjct: 95 GSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVV 154
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+++G VY +G G+ +G ++ + P V+ L I+V A G T V+S R
Sbjct: 155 TESGHVYTWGWGVNGQLGHGDDASQ--SRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRA 212
Query: 273 YTFSWGND--ARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
FSWG D +LGH + P P+ + QIA G Y LAL+ +
Sbjct: 213 -VFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIK------DLQQIACGSSYTLALSSRGD- 264
Query: 326 MAVYSVGCGLGGKLG 340
VY+ G G G+LG
Sbjct: 265 --VYAFGWGKDGQLG 277
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG----DYTTFVVSEDGDVYSFGC 439
+WG+ G LG G + P + AL + + VA G + + V+E G VY++G
Sbjct: 2 SWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGS 61
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+S LGH D Q N++ P+L+ L+ + +V+++ + AHT ++++G
Sbjct: 62 GKSGQLGH---GDSQ-----NLVLPRLIVGLQ--SNPIVEVACGS-----AHTVVVSKAG 106
Query: 500 KLYAFGAGDKGQLGIELVNNQTE 522
++A+G G GQLG+ +N +
Sbjct: 107 LVFAWGWGHFGQLGVGSTHNSND 129
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GYC+ LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1190
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 30/342 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 204
Q AG HS+AV S G Y++G N G+LG GT+ ++ P +P + +Q +A
Sbjct: 739 QVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSA 798
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNF 261
G ++ + G YA+G ++ G+ G T TS ++ + + + VQ + G F
Sbjct: 799 GYHHSLALGSDGNAYAWGYNNSGQLGDGTS-TDRATSVRVKKPAGTSTDFTYVQVSAGAF 857
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLA 318
+ L +G Y + N +LG T + P + GT + QI AGY + LA
Sbjct: 858 HSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLA 917
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR----TDEKHPRLIEQFQLLN-----LQPVVVAAG 369
+ G A Y+ G G+LG+ S+ + +P + N L+ V V AG
Sbjct: 918 VGSD--GYA-YAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAG 974
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV-------QALNDVKAIHVATGD 422
WH+ +G DG WG+ G LG+ + + +VP +V +KA+ V+TG
Sbjct: 975 FWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQ 1034
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
Y + + DG+ Y++G LG+N+I G N A P
Sbjct: 1035 YHSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVP 1076
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 173/412 (41%), Gaps = 49/412 (11%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-----------IIQAA 203
G S+AV S G Y++G N G+LG GTT E R P+ Q R +Q +
Sbjct: 682 GFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVS 741
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAAIGNF 261
AG+ ++ + G YA+G++ G G + V + + + VQ + G
Sbjct: 742 AGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYH 801
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ L +G Y + + N +LG T + V GT + VQ++AG + LA
Sbjct: 802 HSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLA 861
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--EQFQLLNLQPVVVAAGAWHAAVV 376
L S Y+ G G+LG G+ TD P + + + AG H+ V
Sbjct: 862 LG---SDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAV 918
Query: 377 GQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALND---------VKAIHVATGDYTT 425
G DG WG+ G LG+ ++ P V+ N +KA++V G + +
Sbjct: 919 GSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHS 978
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---SLKQVNERVVQISL 482
+ DG+ Y++G + LG+N+ D P LV+ S ++ + + +
Sbjct: 979 LALGSDGNAYAWGFNSNGQLGNNSSKDS--------TVPVLVSDSASPTDTSKGLKAVLV 1030
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG---IELVNNQTERGNPERVDI 531
+ Y H+ AL G YA+G GQLG I +N E +P V +
Sbjct: 1031 STGQY---HSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPV 1079
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 45/230 (19%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIR---------SLQG 196
+Q AG HS+AV S G Y++G N SGQLG+ + + P P+R + +G
Sbjct: 906 AQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKG 965
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLK 249
++ + AG ++ + G YA+G +S G + G +K T P LV ++ K
Sbjct: 966 LKAVNVTAGFWHSLALGSDGNAYAWGFNSNG--QLGNNSSKDSTVPVLVSDSASPTDTSK 1023
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP---NDVE-----PHPLLG 299
+ V + G + + L +G Y +WG++ +LG+++ P N+ E P P++
Sbjct: 1024 GLKAVLVSTGQYHSLALGSDGNAY--AWGDNGYGQLGNNSIPTGSNNNEARSPVPVPVVF 1081
Query: 300 TL---------ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGG 337
L + P + + G +L A QP GM SV LGG
Sbjct: 1082 NLPPVITGVRFDTSPGTNLKSGDGGSVNVLTPAHQP-GMVTVSVDYTLGG 1130
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 147/296 (49%), Gaps = 11/296 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS + + G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDS--DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 VFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIFGW 214
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG D P L++ + + V + G H A + ++G V T+G G YG
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 176/373 (47%), Gaps = 36/373 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
+Y +G N GQLG G+ P PI + Q + I A+G T+ ++ +VY+ G +
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPSPIDANQSV--ISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
FG+ G Q ++ P LV + A G+FF+ ++ G + F WG
Sbjct: 59 EFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLL--FGWGRSLNGE 112
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ + + LL + + VVQ+A G + +AL + + + S G G+LG GS
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT---ILSWGSNTQGQLGLGSS 169
Query: 345 TDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 401
E P +I LN P+ + AGA+H+ V+ G + TWG +G LGHGN + +
Sbjct: 170 EIEFLEPTIIAS---LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQ 226
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S P++V+ L + + VA G+ + + +G V+S+G G + LGHN++ ANV
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSM--------ANV 278
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
P+ + L + V QI HT +LT+ KL FG QLG +N T
Sbjct: 279 TQPKKIMEL--MGTTVCQICCGRR-----HTISLTDKRKLLGFGLNSNNQLG---THNDT 328
Query: 522 ERGNPERVDIDLS 534
P + I L+
Sbjct: 329 SARLPITIPISLT 341
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++ +TS VYS GSN GQLG + + RP + I AAG ++
Sbjct: 38 SGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIA 95
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+++G ++ +G+ GE + + P+L++ + + VVQ A G L+ EG
Sbjct: 96 IAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ SWG++ + LG +E +EP ++ +L P+ QI AG + L+ PSG
Sbjct: 153 I--LSWGSNTQGQLGLG-SSEIEFLEP-TIIASLNAFPISQICAGAYHSGVLS--PSG-T 205
Query: 328 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+++ G G+LGHG S + + PRL++ L + + V VA G H+ ++G V +WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSSPRLVK--TLRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LGH + + PK + L + G T +++ + FG + LG
Sbjct: 264 HGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323
Query: 447 -HN 448
HN
Sbjct: 324 THN 326
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 207
Q G H IA+T +G + S+GSN+ GQLG G++E E+ P I SL I Q AGA
Sbjct: 136 QVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAY 195
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++S +G ++ +GK+++G+ +G +SP+LV++L++ VV A+G + +
Sbjct: 196 HSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
R G V+++ G + +LGH++ N +P ++ L V QI G + ++L
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLT---DKRK 310
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G +LG + T + P I + Q +AAG + Q+ C
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQSFSGSQNESSC 366
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 206
SQ AG HS ++ G ++++G N+ GQLGHG ++ + PR +++L+ ++ A G
Sbjct: 188 SQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGE 247
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ + G V+++G G + G VT P+ + L V Q G T L
Sbjct: 248 EHSVCRTRNGGVFSWGHG--GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISL 305
Query: 267 SREGRVYTFSWGNDARLGHHTE 288
+ + ++ F ++ +LG H +
Sbjct: 306 TDKRKLLGFGLNSNNQLGTHND 327
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPKLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SP+L++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKK-QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 176/366 (48%), Gaps = 42/366 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQL-GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
AG HS+ V+ G V+++G N+SGQL G T + P P+ S + I+ +G ++
Sbjct: 56 AGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPR--DIVSVVSGEAHSL 113
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ +AG V+A+G +S G+ G T VT P V L ++ V A G+F + L +G
Sbjct: 114 ALDEAGTVWAWGGNSSGQLGDGTT-TDRVT-PMQVAGLTDVVAVAA--GDFHSLALRGDG 169
Query: 271 RVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V+ +WG + +LG HTEP + P P+ G LE VV +AAG+ + LA+ +
Sbjct: 170 TVW--AWGTNFHGQLGRGHTEPG-LTPEPVPG-LEG--VVALAAGFDFTLAVMDDGT--- 220
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V + G G+LG G+ T P + ++ V AG +HA +G+DG V TWG
Sbjct: 221 VRAWGANSSGQLGDGTFTQRLAPVEVAHISGIS----AVTAGTYHAVALGKDGGVWTWGA 276
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G +VP V L VKA VA+ D ++ + E G V ++G S LG
Sbjct: 277 NSSGQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVLAWGANGSGQLGD 334
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ D TP V L+ V V H AL G L+A+G G
Sbjct: 335 SGTDD--------RATPGEVPGLRSVAAVVGGAQ---------HALALRGDGTLWAWGGG 377
Query: 508 DKGQLG 513
GQLG
Sbjct: 378 LAGQLG 383
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 171/368 (46%), Gaps = 41/368 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTM 210
AG H +A+ G V+++G N+ GQLG GT+ W PR + L+ + + AAG ++
Sbjct: 1007 AGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDVEAV--AAGEQFSV 1064
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSR 268
+ G +A+G + +G+ G G +L +E+ L+ A A+++
Sbjct: 1065 AVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMA- 1123
Query: 269 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G V +WG++A +LG T P + G VV ++ G + LAL +
Sbjct: 1124 DGTVQ--AWGDNAHGQLGDGTTERRAAPVVVRGL---TGVVAVSTGAWHSLALRSDGT-- 1176
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG G+ P + Q + V + AG +HA V DG V WG
Sbjct: 1177 -VWAWGANGFGQLGDGTTLSRTTPVRVAGLQ----KVVAIGAGGYHALAVRSDGSVWAWG 1231
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ +G LG G E +P V+ L++V + VA GD+ + + DG + ++G + LG
Sbjct: 1232 YNAFGQLGDGTAESRLLPVRVEGLSNVTS--VAGGDHHSLALLADGSLGAWGNNAAGQLG 1289
Query: 447 HNAIADGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
DG G R++ V +K V+ VV++ AHT AL G ++ +G
Sbjct: 1290 -----DGTGTTRYSRVW-------VKGVDG-VVEVRAG-----AAHTLALRGDGTVWTWG 1331
Query: 506 AGDKGQLG 513
QLG
Sbjct: 1332 DNTHSQLG 1339
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 157/369 (42%), Gaps = 43/369 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+AV G +++G+N SGQLG GT + P+ + S++ +R + +AGA +
Sbjct: 957 AGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVKRVRAM--SAGAHHVVA 1014
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G ++ G+ G + P+ V L+++ V AA F AVL G
Sbjct: 1015 LGEDGAVWTWGDNTLGQLGDGTSAPTWMW-PRQVPELRDVEAV-AAGEQFSVAVLVGGG- 1071
Query: 272 VYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+WG+ D + G P V + + PV + A + +AL +
Sbjct: 1072 --AHAWGSNEYGQLGDGKTGPRLTPVQVR---IEASKLRQPVRTVRAWAQHAVALMADGT 1126
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V + G G+LG G+ P ++ + V V+ GAWH+ + DG V
Sbjct: 1127 ---VQAWGDNAHGQLGDGTTERRAAPVVVRGLTGV----VAVSTGAWHSLALRSDGTVWA 1179
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG +G LG G + P V L V AI G Y V DG V+++G
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQKVVAI--GAGGYHALAVRSDGSVWAWGYNAFGQ 1237
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG DG L P V L V T+ + H+ AL G L A+
Sbjct: 1238 LG-----DGTAESR---LLPVRVEGLSNV---------TSVAGGDHHSLALLADGSLGAW 1280
Query: 505 GAGDKGQLG 513
G GQLG
Sbjct: 1281 GNNAAGQLG 1289
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 49/368 (13%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A G ++++G+N SGQLG G+T P ++ L+G+ + +AG ++ +
Sbjct: 911 HGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV--SAGRAFSLAVRQD 968
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G +A+G + G+ G ++ V P+ V S+K + + A G L +G V+T
Sbjct: 969 GTAWAWGANPSGQLGDGTNHSQRV--PKQVTSVKRVRAMSA--GAHHVVALGEDGAVWT- 1023
Query: 276 SWGND--ARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
WG++ +LG T P + P + E V +AAG + +A+ G ++ G
Sbjct: 1024 -WGDNTLGQLGDGTSAPTWMWPRQV---PELRDVEAVAAGEQFSVAVLV---GGGAHAWG 1076
Query: 333 CGLGGKLGHGSRTDEKHPRL------IEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTW 385
G+LG G + PRL IE +L QPV V A A HA + DG V W
Sbjct: 1077 SNEYGQLGDG----KTGPRLTPVQVRIEASKL--RQPVRTVRAWAQHAVALMADGTVQAW 1130
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G +G LG G E + P VV+ L V + V+TG + + + DG V+++G L
Sbjct: 1131 GDNAHGQLGDGTTERRAAPVVVRGLTGV--VAVSTGAWHSLALRSDGTVWAWGANGFGQL 1188
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G + TP V L++V +++ Y H A+ G ++A+G
Sbjct: 1189 GDGTT--------LSRTTPVRVAGLQKV------VAIGAGGY---HALAVRSDGSVWAWG 1231
Query: 506 AGDKGQLG 513
GQLG
Sbjct: 1232 YNAFGQLG 1239
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 162/420 (38%), Gaps = 87/420 (20%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE------------------- 185
R+ ++G HS+A+ G V+++G NSSGQLG GTT +
Sbjct: 100 RDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGD 159
Query: 186 ------------W-------------------RPRPIRSLQGIRIIQAAAGAGRTMLISD 214
W P P+ L+G ++ AAG T+ + D
Sbjct: 160 FHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMD 217
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G V A+G +S G+ G +L +P V + I V A G + L ++G V+T
Sbjct: 218 DGTVRAWGANSSGQLGDGTFTQRL--APVEVAHISGISAVTA--GTYHAVALGKDGGVWT 273
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + +LG + P + G V + A LL V + G
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSLALLEAGS------VLAWGAN 327
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG D P + + + V GA HA + DG + WG G G LG
Sbjct: 328 GSGQLGDSGTDDRATPGEVPGLRSV----AAVVGGAQHALALRGDGTLWAWGGGLAGQLG 383
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HG E VP + L DV ++ A G + + DG V+S+G LG A+
Sbjct: 384 HGGSERHVVPAPLLRLADVASM--AAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAE-- 439
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
RHA V RV +S + + H+ A+ G ++A+G GQLG
Sbjct: 440 --RHAAV--------------RVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLG 483
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 168/424 (39%), Gaps = 86/424 (20%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR------------- 198
AG HS+A G V+S+G N+ GQLG GTT E + L GIR
Sbjct: 407 AGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHSLAVG 466
Query: 199 -----------------------------------IIQAAAGAGRTMLISDAGQVYAFGK 223
++ A G TM + G V+A+G
Sbjct: 467 ADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGY 526
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
++ G+ G +L +P V L ++ V A G +F+ L +G V+T+ G + ++
Sbjct: 527 NALGQLGDGTTVDRL--TPVRVARLDSVVAVAA--GTYFSMALRGDGTVWTWGEGFEGQV 582
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G + P + G L N V ++AAG + ALA + G V++ G G+LG G+
Sbjct: 583 GDGGGVQRLFPVQVAG-LTN--VTRVAAGSAH--ALAVRGDGT-VWAWGDNGEGQLGDGT 636
Query: 344 RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+D P Q+ L + V+ G H+ + DG V WG+ YG LG G
Sbjct: 637 WSDRFRP-----VQVPGLTGITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRV 691
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P VV L ++A+H + + DG + +G LG A G +R
Sbjct: 692 RPAVVPGLTGIQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGAA--GWSSR----- 742
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P V L +V+ V AHT + G + A+G GQLG T
Sbjct: 743 -PVQVRGLGRVDRLAVG---------RAHTLMVRPDGAVLAWGENASGQLGD---GTTTH 789
Query: 523 RGNP 526
R P
Sbjct: 790 RAGP 793
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 157/360 (43%), Gaps = 39/360 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+ + G + +G N GQLG G RP +R L R+ + A G T+++
Sbjct: 711 HVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLG--RVDRLAVGRAHTLMVRPD 768
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V A+G+++ G+ G T P LV + + V A G + L+ +G V+
Sbjct: 769 GAVLAWGENASGQLGDGT--TTHRAGPVLVRGVPCVRSV--ASGVLHSLALACDGSVW-- 822
Query: 276 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+WG + R LG T + V P + G + V LLA ++ G
Sbjct: 823 AWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLALLADGT------AWAWGA 876
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG GS +D P ++ L + VA G H G+DG + WG G L
Sbjct: 877 NAHGQLGDGSTSDRAVPGQLK----LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQL 932
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G+ P V+ L V + V+ G + V +DG +++G S L G
Sbjct: 933 GEGSTTPSPTPVRVKGLEGVAS--VSAGRAFSLAVRQDGTAWAWGANPSGQL-------G 983
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G H+ + P+ VTS+K+V +++ + H AL E G ++ +G GQLG
Sbjct: 984 DGTNHSQRV-PKQVTSVKRVR------AMSAGAH---HVVALGEDGAVWTWGDNTLGQLG 1033
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 22/297 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+A+ S G V+++G+N GQLG GTT P + LQ +++ AG + +
Sbjct: 1164 GAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ--KVVAIGAGGYHALAV 1221
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+A+G ++FG+ G ++L+ P VE L N+ V A G+ + L +G +
Sbjct: 1222 RSDGSVWAWGYNAFGQLGDGTAESRLL--PVRVEGLSNVTSV--AGGDHHSLALLADGSL 1277
Query: 273 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+WGN+A +LG T + G VV++ AG + LAL + V++
Sbjct: 1278 --GAWGNNAAGQLGDGTGTTRYSRVWVKGV---DGVVEVRAGAAHTLALRGDGT---VWT 1329
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G +LG G D R++ + + L V + AGA H+ VG G V WG
Sbjct: 1330 WGDNTHSQLGAGD--DSTRTRIVPR-PVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNS 1386
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+G LG G+ + P V+ L +V V+ G + + DG V S+G +LG
Sbjct: 1387 HGQLGLGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRDGTVSSWGSSLHGALG 1441
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 35/366 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ AG H++AV G V+++G N GQLG GT + +RP + L GI + + G
Sbjct: 603 TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTGITAV--SGGRS 660
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + G V A+G + +G+ G +++ P +V L I + + + L
Sbjct: 661 HSMALHGDGSVRAWGYNGYGQLGDGTFTSRV--RPAVVPGLTGIQALHPS--HLHVLALH 716
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G + + + +LG P + G V ++A G + L + +P G A
Sbjct: 717 ADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGR---VDRLAVGRAHTLMV--RPDG-A 770
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V + G G+LG G+ T P L+ + VA+G H+ + DG V WG
Sbjct: 771 VLAWGENASGQLGDGTTTHRAGPVLVRGVPCVR----SVASGVLHSLALACDGSVWAWGA 826
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G +P V L A+ + + DG +++G LG
Sbjct: 827 NGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQLGD 884
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ +D + V ++ ++ ++L + H A E G L+A+GA
Sbjct: 885 GSTSD------------RAVPGQLKLPSNIMSVALGET-----HGLAAGEDGALWAWGAN 927
Query: 508 DKGQLG 513
GQLG
Sbjct: 928 GSGQLG 933
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 166/377 (44%), Gaps = 39/377 (10%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 198
GE R + + G H++A+ G ++++G +GQLGHG +E P P+ L
Sbjct: 344 GEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLA--D 401
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ AAG+ ++ G V+++G++++G+ G + + VE L I V AA
Sbjct: 402 VASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAER--HAAVRVEGLSGIRGV-AAS 458
Query: 259 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G+ AV +G V+ +WG +A +LG + + P + G VV +A G +
Sbjct: 459 GHHSLAV-GADGTVW--AWGRNAAGQLGDGSTRDRARPVAVSGLTS---VVAVATGGSHT 512
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL + V++ G G+LG G+ D P + + + V VAAG + + +
Sbjct: 513 MALRGDGT---VWAWGYNALGQLGDGTTVDRLTPVRVARLDSV----VAVAAGTYFSMAL 565
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V TWG G G +G G P V L +V VA G V DG V++
Sbjct: 566 RGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLTNV--TRVAAGSAHALAVRGDGTVWA 623
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G LG +D R V P L T + V+ +H+ AL
Sbjct: 624 WGDNGEGQLGDGTWSD----RFRPVQVPGL-TGITAVSGG------------RSHSMALH 666
Query: 497 ESGKLYAFGAGDKGQLG 513
G + A+G GQLG
Sbjct: 667 GDGSVRAWGYNGYGQLG 683
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 163/391 (41%), Gaps = 43/391 (10%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-----LQGIRI 199
R+ AG S+AV G +++GSN GQLG G T P +R Q +R
Sbjct: 1051 RDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRT 1110
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
++A A L++D G V A+G ++ G+ G T+ +P +V L + V + G
Sbjct: 1111 VRAWA-QHAVALMAD-GTVQAWGDNAHGQLGDGT--TERRAAPVVVRGLTGVVAV--STG 1164
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ + L +G V+ + +LG T + P + G + VV I AG + LA+
Sbjct: 1165 AWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQK---VVAIGAGGYHALAV 1221
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
S V++ G G+LG G+ P +E + VA G H+ + D
Sbjct: 1222 RSDGS---VWAWGYNAFGQLGDGTAESRLLPVRVEGLSNVT----SVAGGDHHSLALLAD 1274
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G + WG G LG G V+ ++ V + V G T + DG V+++G
Sbjct: 1275 GSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGV--VEVRAGAAHTLALRGDGTVWTWGD 1332
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTES 498
N H+ + T + V V +S +I A H+FA+
Sbjct: 1333 ----------------NTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPK 1376
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G ++A+G GQLG+ + R P RV
Sbjct: 1377 GTVWAWGRNSHGQLGL---GDNANRAEPLRV 1404
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 45/218 (20%)
Query: 316 LLALACQPSG-MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAAGAWHA 373
LL +AC+P+G +A + PR ++ + P+ +AAG+ H+
Sbjct: 20 LLLVACEPTGELAAL------------------EQPRAARTQRITVTAPPMRIAAGSQHS 61
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 432
V G V WG G LG + + P + + D+ + V +G+ + + E G
Sbjct: 62 LYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDI--VSVVSGEAHSLALDEAG 119
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
V+++G S LG D +TP V L V +++ + H+
Sbjct: 120 TVWAWGGNSSGQLGDGTTTD--------RVTPMQVAGLTDV------VAVAAGDF---HS 162
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERG-NPERV 529
AL G ++A+G GQLG TE G PE V
Sbjct: 163 LALRGDGTVWAWGTNFHGQLG----RGHTEPGLTPEPV 196
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS AV KG V+++G NS GQLG G P ++ L + ++ + GA ++
Sbjct: 1365 AGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSVV--SGGADFSLA 1422
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTK 237
+ G V ++G G G G +
Sbjct: 1423 MQRDGTVSSWGSSLHGALGLGTAGQR 1448
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 16/301 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR-TMLISD 214
H +A+TS+G VYS+G+ G+LGHG T ++ + + + I+ G+ M ++
Sbjct: 202 HYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKV-----LVIVYPYHPEGKHYMALTS 256
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREG 270
G+VY++G G +G ++ P LV L VV G+ ++A ++ +G
Sbjct: 257 EGEVYSWGNGDGGRLGHGDTNSR--EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADG 314
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
++T+ GN RLGH + + + P L+ +L+ V+ I G LA G V+S
Sbjct: 315 ELFTWGRGNYGRLGHGSSEDQLTP-TLVVSLKGRRVIDICCGSGDAQTLAVTDDG-TVWS 372
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G GKLG G K P++I++ Q ++ V V GA + + + G + TWG G
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIIDRLQGQDI--VRVCCGAQFSLALTKTGHIWTWGKGDS 430
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LGHG EE PK ++ L K + VA G V++E+G+VY +G + LG ++
Sbjct: 431 QRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSF 490
Query: 451 A 451
+
Sbjct: 491 S 491
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 177/396 (44%), Gaps = 61/396 (15%)
Query: 127 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 186
G +L+ LL C QA+ G G + V G + G+NS GH
Sbjct: 91 GELRLIFTCLLYASRC----QEQAMPGTGSTQEVLGWGWLAWTGANSPNSSGH------- 139
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQL 244
L + ++Q A + ++ G+VY + +S G PQL
Sbjct: 140 ---TCEMLGELGVLQLACAERCLIALTKTGRVYMCFYSSESQG--------------PQL 182
Query: 245 VESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
+ESL + V++ A G + A L+ EG VY++ G+ RLGH + +L
Sbjct: 183 MESLADKEVLKVAAHPEGKHYMA-LTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVL--- 238
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLL 359
+ V + +AL + VYS G G GG+LGHG + P L+ + L
Sbjct: 239 --VIVYPYHPEGKHYMALTSEGE---VYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL 293
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV- 418
V + G+ ++A + DG + TWG G YG LGHG+ E + P +V +L + I +
Sbjct: 294 GRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDIC 353
Query: 419 -ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
+GD T V++DG V+S+G G+ LG +DG TP+++ L+ + +
Sbjct: 354 CGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGG-SDG-------CKTPKIIDRLQ--GQDI 403
Query: 478 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V++ + ALT++G ++ +G GD +LG
Sbjct: 404 VRVCCGAQF-----SLALTKTGHIWTWGKGDSQRLG 434
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 43/363 (11%)
Query: 158 IAVTSKGVVYS--FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA--GAGRTMLIS 213
IA+T G VY + S S G P+ + SL +++ AA M ++
Sbjct: 160 IALTKTGRVYMCFYSSESQG------------PQLMESLADKEVLKVAAHPEGKHYMALT 207
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G+VY++G G +G LV I G + A L+ EG VY
Sbjct: 208 SEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV-----IVYPYHPEGKHYMA-LTSEGEVY 261
Query: 274 TFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
++ G+ RLGH + EP L G VV I G Y A+ +++
Sbjct: 262 SWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGE---LFT 318
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G+LGHGS D+ P L+ + + + +G V DG V +WG G Y
Sbjct: 319 WGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDY 378
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G + PK++ L + V G + +++ G ++++G G+S LGH
Sbjct: 379 GKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGT- 437
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
++ P+ + L+ ++VV +++ + H +TE G++Y +G D+G
Sbjct: 438 -------EEHIRFPKQLEGLR--GKKVVDVAVG-----SMHCLVMTEEGEVYGWGRNDQG 483
Query: 511 QLG 513
QLG
Sbjct: 484 QLG 486
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--R 208
+ G +S A+T+ G ++++G + G+LGHG++E++ P + SL+G R+I G+G +
Sbjct: 301 VCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQ 360
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ ++D G V+++G +G + G G+ +P++++ L+ +V+ G F+ L++
Sbjct: 361 TLAVTDDGTVWSWGDGDYG--KLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTK 418
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G ++T+ G+ RLGH TE + P L G L VV +A G + L + + V
Sbjct: 419 TGHIWTWGKGDSQRLGHGTEEHIRFPKQLEG-LRGKKVVDVAVGSMHCLVMTEEGE---V 474
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLI 353
Y G G+LG S + + P L+
Sbjct: 475 YGWGRNDQGQLGDSSFSTKSDPTLM 499
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GYC+ LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 172/357 (48%), Gaps = 36/357 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 280
+ + G +L T P L+ L++ V+Q + G+ + LS G+V SWG++
Sbjct: 67 NDHSQL-----GHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQV--LSWGDNDC 119
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH T+ V+ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 176
Query: 341 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGN 397
S D H + LL + +A G H+ ++ + G V +GWGR C LG +
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLND 234
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 235 EANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF-------- 286
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT AL S G++YAFG G GQLG
Sbjct: 287 SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 21/306 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ +IQ + G+
Sbjct: 44 QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTK--RPLLIPELQDYVVIQISCGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +S+ GQV ++G + G+ + ++V P++V L + VVQ A GN + L+
Sbjct: 102 SLALSEWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 321
G +Y SWG++ +LG ++ P D+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG AV+ G G+LG + +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 441 ESASLG 446
S LG
Sbjct: 331 SSGQLG 336
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G + GV K +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYG--QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDEANRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ P I +Q V A G H + +G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTANGK 60
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G + LGH E P ++ L D I ++ G + +SE G V S+G +
Sbjct: 61 VYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDND 118
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH V P++V L V++ VVQI+ N+ H+ ALT G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
Y++G+ GQLG+ + T P R+
Sbjct: 165 YSWGSNIYGQLGVNSPKDLTHCNYPLRL 192
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG T+ LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GYC+ LAL+ V+ G G+LG G+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALS---KASEVFCWGQNKYGQLGLGTDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 141 QVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 180/363 (49%), Gaps = 25/363 (6%)
Query: 137 LAGEACCR-------RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
L G+ C + ++ + + G + + + G V++ G + G+LG GT+++E
Sbjct: 304 LQGKTCLQPNLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLV 363
Query: 190 PIRSLQGIRIIQAAA---GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
PI LQG IIQ A G G T+ ++D+G+V+++G +G+ +G ++ P+ +
Sbjct: 364 PITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHG--NSERQRKPKQII 421
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L+ VVQA+ G +AVL+++G+V+TF G LG P +L +L+N +
Sbjct: 422 ALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLIL-SLKNEHI 480
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
QIA G + LALA +G +Y+ G G GKLG GS + P L++ ++ + L+ +
Sbjct: 481 SQIACGKDHTLALA--NNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKK--I 536
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
A G+ + V+ +G + T+G + + + ++P++V +L I +A G
Sbjct: 537 ACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYIL 596
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+ G+++ +G E LG G N H PQLV + N + T+
Sbjct: 597 ALDNSGNIWGWGTNEEGQLGI-----GTTNPHY---LPQLVCTFSGTNITRLSAGTTHCA 648
Query: 487 YWN 489
W+
Sbjct: 649 AWS 651
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 167/363 (46%), Gaps = 29/363 (7%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
+++ VY +GSN G+L + +P + + + +R + G T L+ G V+
Sbjct: 284 ISAPITVYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVR--EIVCGQNCTFLLQTNGSVF 341
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFS 276
A G+ ++G G + P + L+ ++Q A G+ T ++ G V+++
Sbjct: 342 ACGEGTYGRLGQGTSDDEHSLVP--ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWG 399
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G+ +LGH +P ++ L+ VVQ + G+ + L V++ G G
Sbjct: 400 DGDYGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKHSAVLT---KDGKVFTFGQGQY 455
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGH 395
G LG G + +K P+LI L N +A G H + +G+ + WG G +G LG
Sbjct: 456 GILGDGGNSPQKTPQLI--LSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ S+P +V + +V +A G + V++ +G +Y+FG + + + D
Sbjct: 514 GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNT- 572
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
PQ+V+SL + ++ I++ + + AL SG ++ +G ++GQLGI
Sbjct: 573 -------IPQIVSSL--MPHPIIDIAVGCN-----YILALDNSGNIWGWGTNEEGQLGIG 618
Query: 516 LVN 518
N
Sbjct: 619 TTN 621
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-LLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+V++ G G G+LG G+ DE I + Q +Q G H V G V +W
Sbjct: 339 SVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSW 398
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G YG LGHGN E + PK + AL + + G + V+++DG V++FG G+ L
Sbjct: 399 GDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGIL 458
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYAF 504
G DG GN TPQL+ SLK NE + QI+ HT AL +G KLYA+
Sbjct: 459 G-----DG-GNSPQK--TPQLILSLK--NEHISQIACGKD-----HTLALANNGKKLYAW 503
Query: 505 GAGDKGQLGIELVNNQTERGNPERVD 530
G G+ G+LG+ + + R P VD
Sbjct: 504 GDGEFGKLGL---GSTSVRSIPNLVD 526
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G+N+ GQLGH E +P I +L I+ A
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQL--GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+ AG + AL+
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVVAGGAHSFALSL- 207
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---KLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 ARGQLG 328
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + V + A G + L +G VYT +LGH E N E
Sbjct: 21 VVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + +V +A G + LAL+ Q ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
V G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L VV AG H+ +
Sbjct: 152 LAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV--AGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 126/258 (48%), Gaps = 12/258 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++S G+ G + SPQ V SL+ I + Q G + LS G
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 391 GCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q +AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + LL +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+L++ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPKLLKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SP+L++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKK-QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ ++SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 176/373 (47%), Gaps = 36/373 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
+Y +G N GQLG G+ P PI + Q + I A+G T+ ++ +VY+ G +
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPSPIDANQSV--ISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
FG+ G Q ++ P LV + A G+FF+ ++ G + F WG
Sbjct: 59 EFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLL--FGWGRSLNGE 112
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ + + LL + + VVQ+A G + +AL + + + S G G+LG GS
Sbjct: 113 LMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT---ILSWGSNTQGQLGLGSS 169
Query: 345 TDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-E 401
E P +I LN P+ + AGA+H+ V+ G + TWG +G LGHGN + +
Sbjct: 170 EIEFLEPTIIAS---LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQ 226
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
S P++V+ L + + VA G+ + + +G V+S+G G + LGHN++ ANV
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSM--------ANV 278
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
P+ + L + V QI HT +LT+ KL FG QLG +N T
Sbjct: 279 TQPKKIMEL--MGTTVCQICCGRR-----HTISLTDKRKLLGFGLNSNNQLG---THNDT 328
Query: 522 ERGNPERVDIDLS 534
P + I L+
Sbjct: 329 SARLPITIPISLT 341
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++ +TS VYS GSN GQLG + + RP + I AAG ++
Sbjct: 38 SGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGFGAEEIFHVAAGDFFSIA 95
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+++G ++ +G+ GE + + P+L++ + + VVQ A G L+ EG
Sbjct: 96 IAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGT 152
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ SWG++ + LG +E +EP ++ +L P+ QI AG + L+ PSG
Sbjct: 153 I--LSWGSNTQGQLGLG-SSEIEFLEP-TIIASLNAFPISQICAGAYHSGVLS--PSG-T 205
Query: 328 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+++ G G+LGHG S + + PRL++ L + + V VA G H+ ++G V +WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSSPRLVK--TLRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LGH + + PK + L + G T +++ + FG + LG
Sbjct: 264 HGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323
Query: 447 -HN 448
HN
Sbjct: 324 THN 326
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 207
Q G H IA+T +G + S+GSN+ GQLG G++E E+ P I SL I Q AGA
Sbjct: 136 QVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAY 195
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++S +G ++ +GK+++G+ +G +SP+LV++L++ VV A+G + +
Sbjct: 196 HSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
R G V+++ G + +LGH++ N +P ++ L V QI G + ++L
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVCQICCGRRHTISLT---DKRK 310
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G +LG + T + P I + Q +AAG + Q+ C
Sbjct: 311 LLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQSFSGSQNESSC 366
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 206
SQ AG HS ++ G ++++G N+ GQLGHG ++ + PR +++L+ ++ A G
Sbjct: 188 SQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGE 247
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ + G V+++G G + G VT P+ + L V Q G T L
Sbjct: 248 EHSVCRTRNGGVFSWGHG--GNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISL 305
Query: 267 SREGRVYTFSWGNDARLGHHTE 288
+ + ++ F ++ +LG H +
Sbjct: 306 TDKRKLLGFGLNSNNQLGTHND 327
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +QIAAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + +AAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVY++G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VYS+G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ VA G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY++ +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 150/302 (49%), Gaps = 11/302 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS + + G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDS--DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 VFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIFGW 214
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG D P L++ + + V + G H A + ++G V T+G G YG
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LGH + E P+ V L +A G +T+ V G +YSFG G + LG +
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 451 AD 452
++
Sbjct: 333 SN 334
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKK-QTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGLDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ L+ + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 167/341 (48%), Gaps = 27/341 (7%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
R N G HS+ + V + +G G+LG T +++P ++ R+ A+
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDV-FVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMAS 141
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG + +++ G VY +G +FG +G +L+ P+L+E +V + G +
Sbjct: 142 AGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELL--PRLLEGPWKDRIVHVSAGGSHS 199
Query: 264 AVLSREGRVYTFSWGND---ARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 316
A ++ G +YT WG D RLGH P+ ++ P ++P+ + G +
Sbjct: 200 AAVTESGELYT--WGRDEGEGRLGH-GNPDIMDEGALSRPTKVQALDVPIASVYCGGFFT 256
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL SG ++S G +LGHG+R + P+++ + + L V VA G +HAA +
Sbjct: 257 MALT--KSGQ-LWSWGGNANHELGHGTRANNWKPKVVAALEDVTL--VQVACGGFHAAAL 311
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
QDG+V TWG+G G LGHG E P +V+A+ D ++A G T ++E+GD+Y+
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYT 371
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
+G LG + D Q L P LV + ++E+
Sbjct: 372 WGKNRDYQLGIPGLKDEQ-------LDPVLVQFPQALHEKT 405
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 158/330 (47%), Gaps = 51/330 (15%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAI----------GN----- 260
+V+A+G+ + G+ +G + T+ + P L+ +LK F A I GN
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKL--PVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93
Query: 261 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLA 318
F +VL E V+ + G+ RLG TE N +P+ I VQ+A AG + +A
Sbjct: 94 GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPY----VNPRIKRVQMASAGGLHNIA 149
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + VY+ G G G LGHGS E PRL+E + V V+AG H+A V +
Sbjct: 150 LTEVGN---VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRI--VHVSAGGSHSAAVTE 204
Query: 379 DGRVCTWGWGR-YGCLGHGN-----EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
G + TWG G LGHGN E S P VQAL DV V G + T +++ G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFFTMALTKSG 263
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++S+G + LGH G R AN P++V +L+ V +VQ++ H
Sbjct: 264 QLWSWGGNANHELGH-------GTR-ANNWKPKVVAALEDVT--LVQVACGGF-----HA 308
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTE 522
ALT+ GK+ +G G GQLG + N E
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKE 338
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 45/376 (11%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-----GIRIIQA-------------AAGAG 207
V+++G + GQ+GHG+ + E P I +L+ G+ IQ G
Sbjct: 37 VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLF 96
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++L ++ V+ +GK G G+ P + +K V A+ G L+
Sbjct: 97 HSVLFAEQ-DVFVWGKGDGGR--LGIDTEFNQYKPYVNPRIKR--VQMASAGGLHNIALT 151
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G VYT+ +G LGH + ++ P L G ++ +V ++AG + + A SG
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSH--SAAVTESG-E 207
Query: 328 VYSVGCGLG-GKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
+Y+ G G G+LGHG+ DE + Q L++ V G + + + G++ +
Sbjct: 208 LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWS 267
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG LGHG PKVV AL DV + VA G + +++DG V ++G G +
Sbjct: 268 WGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQ 327
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH + +G+ P +V E + + T A T A+TE+G LY +
Sbjct: 328 LGHGTLENGK--------EPAIV-------EAMADKTCTYIACGPAWTAAITENGDLYTW 372
Query: 505 GAGDKGQLGIELVNNQ 520
G QLGI + ++
Sbjct: 373 GKNRDYQLGIPGLKDE 388
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 44/236 (18%)
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 359
GY + +P+ + V++ G G G++GHGS EK P LI +L
Sbjct: 21 GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80
Query: 360 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
L V V G +H+ + + V WG G G LG E + P V + V+
Sbjct: 81 PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+ G ++E G+VY++G G +LGH + + L P+L+ +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS--------YERELLPRLLEG--PWKD 187
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD-KGQLGIELVNNQTERGNPERVD 530
R+V +S S H+ A+TESG+LY +G + +G+LG GNP+ +D
Sbjct: 188 RIVHVSAGGS-----HSAAVTESGELYTWGRDEGEGRLG---------HGNPDIMD 229
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 169/356 (47%), Gaps = 28/356 (7%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR R+ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
V + +L I +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P++I+ LL + +AAG H+ V+ G + WG ++G LG ++ VP
Sbjct: 177 KQTSPQMIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +H+ G+ T ++++G V++FG G LGHN+ ++ + P+
Sbjct: 235 LLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST--------SHEINPR 286
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 520
V L + V QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 287 KVFEL--MGSVVTQITCGRQ-----HTTAFVPSSGRIYSFGLGGNGQLGTGTTSNR 335
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 145/299 (48%), Gaps = 17/299 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G + G+ G+ GT + V P+ + SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG E ++ +L IP QIAAG + L SG A++
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
G G+LG D P L++ L Q VV + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDDNDRYVPTLLKS---LRSQKVVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L + G +TT V G +YSFG G + LG
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G + GQLG TEE R PR IRSL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ +G+ G + K TSPQ+++SL I Q A G + VL+ G
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKK-QTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + + ND LL +L + VV I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ + G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G P V+
Sbjct: 323 GNGQLGTGTTSNRKSPFTVK 342
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + V P L++SL++ VV G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLKSLRSQKVVHICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + ++ V QI G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSV-VTQITCGRQHTTAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG G+ ++ K P
Sbjct: 316 IYSFGLGGNGQLGTGTTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS +T G ++ +G N GQLG + + P ++SL+ +++ G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG T N P + G+
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGS 344
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVY++G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VYS+G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ VA G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY++ +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH E +P I +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDC--EGSKPEQIGALAGQHIVHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQ++++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 TRGQLG 328
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G SFG+ G +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E + E +G L +V +A G + LAL+ Q ++S G G G+LG
Sbjct: 64 GQLGHDCEGSKPEQ---IGALAGQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG YG LG G E
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 175 CPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 28/349 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + +G+K P+ + +L +V A G + LS +G+++++ G+D +LG
Sbjct: 64 GQLGHDCEGSK----PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLT 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 345
T + V L+ L ++Q++ G + LALA ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ---FFTWGQNSYGQLGLGKECP 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+ ++ + L V AAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D R
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
L+ + V QI+ HT A SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 16/257 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG ++ +LG E D E + L + VV I+ G + L SG V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 389 RYGCLGHG---NEECES 402
G LG G N +C S
Sbjct: 323 TRGQLGTGHTCNVKCPS 339
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T + V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADEHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ + PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEESVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRAQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADEHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTEE PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRAQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 177/364 (48%), Gaps = 33/364 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +G+ + G+LG G EEE PR + Q +++ G T+ ++ G++YA G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 281
+ G+ + + T PQ + SL+N + + G + L+ G+V FSWG++A
Sbjct: 63 NDHGQLGHDLD-TLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQV--FSWGSNAVG 119
Query: 282 RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N +P P ++ + VVQIA+G + LAL + +Y+ G G+LG
Sbjct: 120 QLGHDAE-NGRQPTPRMIKAIGAKHVVQIASGQYHCLALT---NNGELYAWGSNSYGQLG 175
Query: 341 HGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G+ T EK P LI+ L + +A G H+ V + G + WG +G LG +
Sbjct: 176 IGT-TSEKVPMPTLIQS--LAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
P ++ L + +++ GD + ++ +G V++ G G LGH +
Sbjct: 233 NSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC-------- 284
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELV 517
+N + P+ V L + ++ QI+ HT A S GK+Y FG G GQLGI +V
Sbjct: 285 SNEIVPRKVFEL--MGSKITQIACGRR-----HTLAFVPSRGKIYGFGLGGVGQLGIGMV 337
Query: 518 NNQT 521
N +
Sbjct: 338 GNHS 341
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 28/323 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++ +T +G +Y+ G+N GQLGH T RP+ + SL+ I + G ++
Sbjct: 44 GTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLA 103
Query: 212 ISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+++ GQV+++G ++ G +AE G Q T P++++++ VVQ A G + L+
Sbjct: 104 LTNWGQVFSWGSNAVGQLGHDAENGRQPT-----PRMIKAIGAKHVVQIASGQYHCLALT 158
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
G +Y +WG+++ +LG T V L+ +L +P+ IA G + + A SG
Sbjct: 159 NNGELY--AWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNH--SFAVSKSG 214
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
A++ G G+LG +P + + L ++ ++ G + + +G V T
Sbjct: 215 -AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR--YISCGDDFSVFLTNEGGVFTC 271
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 444
G G +G LGHG+ E VP+ V L K +A G +T V G +Y FG G
Sbjct: 272 GAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQ 331
Query: 445 LGHNAIADGQGNRHANVLTPQLV 467
LG + N TPQ+V
Sbjct: 332 LGIGMV--------GNHSTPQIV 346
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A+T+ G V+S+GSN+ GQLGH + PR I+++ ++Q A+G +
Sbjct: 97 GTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLA 156
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+++ G++YA+G +S+G+ G K V P L++SL + + A G + +S+ G
Sbjct: 157 LTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 215
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + + P L TL ++ V I+ G + + L + V+
Sbjct: 216 I--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSLGVRYISCGDDFSVFLTNEG---GVF 269
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGHGS ++E PR + F+L+ + +A G H A V G++ +G G
Sbjct: 270 TCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 327
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G S P++V+
Sbjct: 328 GVGQLGIGMVGNHSTPQIVR 347
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 207
Q +G H +A+T+ G +Y++GSNS GQLG GTT E+ P I+SL G+ I A G
Sbjct: 146 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGN 205
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G ++ +GK++FG+ G+ P + +L+++ V + G+ F+ L+
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQL--GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT 263
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
EG V+T G +LGH + N++ P + L + QIA G + LA PS
Sbjct: 264 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-ELMGSKITQIACGRRHTLAFV--PSRGK 320
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLI 353
+Y G G G+LG G + P+++
Sbjct: 321 IYGFGLGGVGQLGIGMVGNHSTPQIV 346
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G + +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P++++ L ++Q + GN+ + L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 148/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHNLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PR+I++ LN Q ++ V+ G WH+ + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDAVAVPRVIQK---LNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 148/317 (46%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G LS G+++++ G+D +LG T + V ++ L ++Q++ G + LA
Sbjct: 92 GESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AAG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 141 QVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ + SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 129/259 (49%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G ++
Sbjct: 92 GESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQASPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL+ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V QIA G + A PS +YS G G G+LG GS ++ K P ++
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + L+ +L IP +Q+AAG + L SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT QI+ HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVT----------QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 16/226 (7%)
Query: 136 LLAGEACCRRENS----------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EE 184
LL E C R + Q G HS+A++ V+ +G N GQLG G ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ I+SL GI +Q AAG + +++ +G ++ +G++ FG+ + + V P L
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNL 235
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
++SL++ +V G TA L++EG V+TF G +LGH++ +++ P + + +I
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V QIA G + A PS +YS G G G+LG GS ++ K P
Sbjct: 296 -VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G HS+ + G VY+ G N+ GQLGH E +P I +L G I+ A
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDC--EGSKPEQIGALAGQHIVHVAC 91
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +SD GQ++++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQLFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHC 149
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQR-VKSLDGIPLAQVAAGGAHSFALSL- 207
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
SG AV+ G G+LG D + P + +LL Q VV ++ G H AV+ + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHV---KLLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCG 440
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 441 ESASLG 446
LG
Sbjct: 323 TRGQLG 328
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 149/312 (47%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S+G+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E + E +G L +V +A G + +AL+ Q ++S G G G+LG
Sbjct: 64 GQLGHDCEGSKPEQ---IGALAGQHIVHVACGESHSVALSDQGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG YG LG G E
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 175 CPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT+SG ++ FGAG GQLG + +
Sbjct: 235 HVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 28/349 (8%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G +S GQ G G+ + P P + + + A G ++ + + G+VY G ++
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + +G+K P+ + +L +V A G + LS +G+++++ G+D +LG
Sbjct: 64 GQLGHDCEGSK----PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLT 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 345
T + V L+ L ++Q++ G + LALA ++ G G+LG G
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ---FFTWGQNSYGQLGLGKECP 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+ ++ + L V AAG H+ + G V WG G LG +E P
Sbjct: 177 SQASPQRVKSLDGIPLAQV--AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D R
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV------ 288
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
L+ + V QI+ HT A SG +YAFG G +GQLG
Sbjct: 289 ----LELMGSEVSQIACGRH-----HTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG ++ +LG E D E + L + VV I+ G + L SG V+
Sbjct: 211 V--FGWGKNSSGQLGLSDE-RDRESPCHVKLLRSQKVVYISCGEEHTAVLT--KSG-GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 389 RYGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L+ +++ + G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 177/353 (50%), Gaps = 28/353 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N GQLG + P ++++ +R + A G+ +++ G+VY G+ +
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGA 2930
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G G+ T+ ++ P +++L FV + + G + ++REG+V+++ G D +L
Sbjct: 2931 NGR--LGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + + P L+ LE+ +V+IA G + A+ +Y+ G G G+LGHG
Sbjct: 2989 GHGDVTSRLSP-TLIEALESKLIVEIACGSSHSAAVTADGE---LYTWGLGDYGRLGHGD 3044
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECE 401
P+ ++ Q + + + +A G+ A + C W WG +G LG G E
Sbjct: 3045 SKTLHIPKQVKALQ--DYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGC 3102
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
++P+ + AL +A G + +S G V+++G G+ LGH GN ++
Sbjct: 3103 NIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGH-------GN-DSHY 3154
Query: 462 LTPQLVTS-LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+PQL+ LK+ +R+ +I++ H A+T++G++Y++G D GQ G
Sbjct: 3155 RSPQLIEGPLKK--KRITEIAVG-----ALHCLAVTDTGEVYSWGDNDHGQQG 3200
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 153/314 (48%), Gaps = 41/314 (13%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I Q + + +++ G+VY+ ++ EA P L++SL +I + + A
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEA------------PVLLDSLIDIKIKKIAA 518
Query: 259 ---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYC 314
G + A LS +G VY++ G+ RLGH D+ P L+ L N + QIA G
Sbjct: 519 NVEGEHYLA-LSSDGCVYSWGSGDGGRLGH----GDIRREPELVKELVNKKITQIACGST 573
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
Y A+ S +Y+ G G G+LGHG+ D P L+ ++ V +G H
Sbjct: 574 YSAAVT---SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTL 630
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDG 432
+ +DG V +WG G YG LG G +C VPKVV+ L ++ ++V G + + +DG
Sbjct: 631 AIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDG 690
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
V+++G + LGH + +V P++V L +N +V I++ S H
Sbjct: 691 TVWTWGKSDGYRLGHGTL--------DHVRYPKMVEGL--INYHIVDIAVGPS-----HC 735
Query: 493 FALTESGKLYAFGA 506
ALT++ +++ +G+
Sbjct: 736 LALTDNCQIFTWGS 749
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 150/302 (49%), Gaps = 10/302 (3%)
Query: 150 AIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGA 206
+IAG ++ VT G VY G ++G+LG G TE P + +L ++ + G
Sbjct: 2906 SIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGG 2965
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ I+ G+V+++G+ G+ +G ++L SP L+E+L++ +V+ A G+ +A +
Sbjct: 2966 RHSLCITREGKVFSWGEGIDGKLGHGDVTSRL--SPTLIEALESKLIVEIACGSSHSAAV 3023
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +YT+ G+ RLGH P + L++ V+ IA G LA +
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDSKTLHIPKQ-VKALQDYKVIDIACGSRDAQTLALTDNN- 3081
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G P+ I+ L +A GA + + G+V TWG
Sbjct: 3082 CVWSWGDGDFGKLGRGGSEGCNIPQKID--ALCGRDVCRIACGAQFSLALSTTGKVWTWG 3139
Query: 387 WGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G Y LGHGN+ P++++ L + +A G V++ G+VYS+G +
Sbjct: 3140 KGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199
Query: 446 GH 447
G+
Sbjct: 3200 GN 3201
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++ +TS V+S+G G+LGHG PR I +L G +I+ + G+ +
Sbjct: 3864 SGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAA 3923
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ G++Y +GK +G +G L P+L+E+LK+ V+ A G+ L+
Sbjct: 3924 ITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYKVIDVACGSGDAQTLAITDD 3981
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+SWG+ +LG +D PL + +L + V ++ G + +AL +
Sbjct: 3982 DCVWSWGDGDYGKLGRGG--SDGCKKPLRIESLIGMAVCKVECGSQFSVALT---KNGDL 4036
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHG+ + PR + Q Q V VAAG+ H G V TWG
Sbjct: 4037 YTWGKGDYYRLGHGTNDHVRRPRKVACLQ--GKQIVTVAAGSLHCVACTDAGEVFTWGDN 4094
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G LG+G P +V L +VK V G +F S + +
Sbjct: 4095 DEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPI 4140
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 23/349 (6%)
Query: 167 YSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
Y +G N GQLG + P + +R A G +++ G+VYA G
Sbjct: 3773 YVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLGGS 3832
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLG 284
G G + +P ++E L+++ + + ++ G VL+ V+++ G D +LG
Sbjct: 3833 GRLGIGRSDN--IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
H + + P + L +V I+ G + A+ S +Y+ G G G+LGHG
Sbjct: 3891 HGDKLSSETPRKIEALLGK-QIVHISCGSSHSAAIT---SKGELYTWGKGRYGRLGHGDG 3946
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
D P+L+E + + V +G + D V +WG G YG LG G + P
Sbjct: 3947 DDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKP 4006
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+++L + V G + ++++GD+Y++G G+ LGH N H V P
Sbjct: 4007 LRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGT------NDH--VRRP 4058
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ V L+ +++V ++ + H A T++G+++ +G D+GQLG
Sbjct: 4059 RKVACLQ--GKQIVTVAAG-----SLHCVACTDAGEVFTWGDNDEGQLG 4100
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+ +T +G V+S+G G+LGHG P I +L+ I++ A G+ + +
Sbjct: 2964 GGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAV 3023
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G++Y +G +G +G +K + P+ V++L++ V+ A G+ L+
Sbjct: 3024 TADGELYTWGLGDYGRLGHG--DSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNN 3081
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+SWG+ +LG P + L V +IA G + LAL+ + V++
Sbjct: 3082 CVWSWGDGDFGKLGRGGSEGCNIPQK-IDALCGRDVCRIACGAQFSLALS---TTGKVWT 3137
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G +LGHG+ + + P+LIE L + +A GA H V G V +WG +
Sbjct: 3138 WGKGDYYRLGHGNDSHYRSPQLIEG-PLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDH 3196
Query: 391 GCLGHGNEECESVPKV-VQALNDVKAIHVATG 421
G G+GN P++ + L+ VK H+A G
Sbjct: 3197 GQQGNGNTTVNKRPQICLGELDGVKISHIACG 3228
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 164/344 (47%), Gaps = 17/344 (4%)
Query: 150 AIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGA 206
A+AG ++ + TS+G VY+ G SG+LG G ++ P I LQ ++I + +G
Sbjct: 3807 AVAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGG 3866
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
M+++ +V+++G G+ +G + + +P+ +E+L +V + G+ +A +
Sbjct: 3867 RHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAI 3924
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +YT+ G RLGH + ++P LL L++ V+ +A G LA
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGDDCLKP-KLLEALKSYKVIDVACGSGDAQTLAITDDD- 3982
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L+ + V G+ + + ++G + TWG
Sbjct: 3983 CVWSWGDGDYGKLGRGGSDGCKKPLRIE--SLIGMAVCKVECGSQFSVALTKNGDLYTWG 4040
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G Y LGHG + P+ V L + + VA G ++ G+V+++G + LG
Sbjct: 4041 KGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLG 4100
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+ + + P LVT L+ V V +S W+
Sbjct: 4101 NGTLNP--------IPEPTLVTVLENVKLNRVGCGSAHSFAWST 4136
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 19/285 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A++S G VYS+GS G+LGHG E P ++ L +I Q A G+ + ++
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVTSN 581
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G++Y +G+ S+G +G +L+ P LV L VV A G+ T + ++G V+
Sbjct: 582 GELYTWGRGSYGRLGHGNSEDRLL--PTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVW 639
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLE--NIPVVQIAAGYCYLLALACQPSGMAVYSV 331
++ G+ +LG P ++ TL+ N +V + G + +AL + V++
Sbjct: 640 SWGDGDYGKLGRGGSDCCKVP-KVVETLKHHNKYIVNVLCGSQFSVALGKDGT---VWTW 695
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG--R 389
G G +LGHG+ ++P+++E L+N V +A G H + + ++ TWG +
Sbjct: 696 GKSDGYRLGHGTLDHVRYPKMVE--GLINYHIVDIAVGPSHCLALTDNCQIFTWGSDVQK 753
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
Y L N E P + A+N VA G F+ + G +
Sbjct: 754 YA-LSSDNYNME--PTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
++ +Q G +S AVTS G +Y++G S G+LGHG +E+ P + L G ++ A
Sbjct: 563 KKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVAC 622
Query: 205 GAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAIGN 260
G+G T+ I G V+++G +G+ G G+ P++VE+LK N ++V G+
Sbjct: 623 GSGDAHTLAIDKDGIVWSWGDGDYGKLGRG--GSDCCKVPKVVETLKHHNKYIVNVLCGS 680
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
F+ L ++G V+T+ + RLGH T + P + G L N +V IA G + LAL
Sbjct: 681 QFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEG-LINYHIVDIAVGPSHCLALT 739
Query: 321 --CQ 322
CQ
Sbjct: 740 DNCQ 743
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G A C+ E G S+A+T G +Y++G +LGHGT + RPR + LQG
Sbjct: 4012 LIGMAVCKVE-----CGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQG 4066
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ AAG+ + +DAG+V+ +G + G+ G + P LV L+N+ + +
Sbjct: 4067 KQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNP--IPEPTLVTVLENVKLNRV 4124
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 292
G+ ++F+W +A + PN +
Sbjct: 4125 GCGS-----------AHSFAWSTEAPIDIGYMPNQI 4149
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 31/243 (12%)
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ WGN LG + ++ + T+ + + QI ++AL + VYS
Sbjct: 439 KTEVLGWGNINWLGGESNDGSLKIYE---TVAELGIKQIMCSSDNIIALT---NNGRVYS 492
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
L + +R + P L++ + ++ + H + DG V +WG G
Sbjct: 493 --------LAYNARCEA--PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDG 542
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ E P++V+ L + K +A G + V+ +G++Y++G G LGH
Sbjct: 543 GRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGH--- 597
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
GN +L P LV L VV ++ + +AHT A+ + G ++++G GD G
Sbjct: 598 ----GNSEDRLL-PTLVAGLS--GSHVVDVACGSG---DAHTLAIDKDGIVWSWGDGDYG 647
Query: 511 QLG 513
+LG
Sbjct: 648 KLG 650
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 57/221 (25%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G HS AVT+ G +Y++G G+LGHG ++ P+ +++LQ ++I A G+ +T+
Sbjct: 3016 GSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTL 3075
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D V+++G FG+ G G++ PQ +++L V + A G F+ LS G
Sbjct: 3076 ALTDNNCVWSWGDGDFGKLGRG--GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTG 3133
Query: 271 RVYTFSWGNDARLGH-----HTEPNDVE-------------------------------- 293
+V+T+ G+ RLGH + P +E
Sbjct: 3134 KVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGD 3193
Query: 294 ----------------PHPLLGTLENIPVVQIAAGYCYLLA 318
P LG L+ + + IA G + +A
Sbjct: 3194 NDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIA 3234
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIR 198
+A C R+ + G S+A+++ G V+++G +LGHG P+ I L+ R
Sbjct: 3109 DALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKR 3168
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
I + A GA + ++D G+VY++G + G+ G T + PQ+
Sbjct: 3169 ITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG--NTTVNKRPQI 3212
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G S+A+ G V+++G + +LGHGT + P+ + L I+ A G
Sbjct: 675 NVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSH 734
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFF 262
+ ++D Q++ +G D +Y + P + ++ F+ A G NF
Sbjct: 735 CLALTDNCQIFTWGSDV---QKYALSSDNYNMEPTCISAINKEFIAGVACGPAQNFL 788
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 13/135 (9%)
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
D RV WG G LG P ++ + ++ + +A G T F+V+ DG VY G
Sbjct: 2868 DSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
G + L G GN N+ P + +L + V + H+ +T
Sbjct: 2928 EGANGRL-------GLGNTE-NISIPVQLDTLNMHFVKKVTVHPGGR-----HSLCITRE 2974
Query: 499 GKLYAFGAGDKGQLG 513
GK++++G G G+LG
Sbjct: 2975 GKVFSWGEGIDGKLG 2989
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGIRIIQA 202
++ ++ G H +AVT G VYS+G N GQ G+G T RP+ + L G++I
Sbjct: 3166 KKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHI 3225
Query: 203 AAGAGRTM 210
A G+ ++
Sbjct: 3226 ACGSSHSI 3233
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+ AG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVTAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ ++G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 30/312 (9%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E N E +G L + +V +A G + LAL+ + ++S G G G+LG
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLG 117
Query: 341 HGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L + V G +F +S G V+ +G + LG + D +
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS HT LT++G ++ FGAG GQLG + +
Sbjct: 235 HVKLLRTQ----------KVVYISCGEE-----HTAVLTKNGGVFTFGAGSCGQLGHDSM 279
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 280 NDEV---NPRRV 288
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L V AG H+ +
Sbjct: 152 LAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--TAGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V++++G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCP 338
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVTAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG E + P H L L VV I+ G + L V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLT---KNGGVFT 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 390 YGCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKNGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 170/343 (49%), Gaps = 20/343 (5%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E QA +G HS+ + S G V+S G NS GQLG + E +P+PI++L+ +R+ + G
Sbjct: 35 ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCG 94
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ + G+V+A+G S G+ G + ++ PQ +++L I ++Q + GN+ +
Sbjct: 95 KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153
Query: 266 LSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
LS +G+V FSWG+++ +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 154 LSEDGQV--FSWGSNSHGQLGLGKELPSQASPQR-VRSLDGIPLAQVAAGGAHSFALSLS 210
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ S G G PR + + L + V ++ G H AV+ Q+G+V
Sbjct: 211 GTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGV--VYISCGHEHTAVLTQNGKV 268
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 441
T+G G LGH ++ P++++ + + + + G Y T V G V SFG G
Sbjct: 269 FTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVS-QIDCGSYHTLAYVYTTGQVVSFGRGP 327
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
S N H +LT + ER+V + + +
Sbjct: 328 SCKSCSN---------HPELLTENTDVTCLISAERLVDVQVKH 361
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
AV+S G G+LG E+ P+ I+ + L ++ +V+ G H+ V GRV WG
Sbjct: 54 AVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVE--LVSCGKEHSLAVCYKGRVFAWG 111
Query: 387 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G LG G +E +P+ ++ L +K I V+ G+Y + +SEDG V+S+G L
Sbjct: 112 AGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQL 171
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G G + +PQ V SL I L AH+FAL+ SG + +G
Sbjct: 172 G-------LGKELPSQASPQRVRSLDG-------IPLAQVAAGGAHSFALSLSGTSFGWG 217
Query: 506 AGDKGQLGIELVNNQTERGNPERV 529
+ + GQL N + P V
Sbjct: 218 SNNAGQLAFFGSNVPVQSYKPRSV 241
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 22/262 (8%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
QAA G + +L +G V++ + +LG + +P P+ LE + V ++ G
Sbjct: 38 QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPI-QALETLRVELVSCGKE 96
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWH 372
+ LA+ + V++ G G G+LG G + K LI Q L ++ + V+ G +H
Sbjct: 97 HSLAVCYKGR---VFAWGAGSEGQLGIG---EFKEINLIPQKIKTLTGIKIIQVSCGNYH 150
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
+ + +DG+V +WG +G LG G E ++ P+ V++L+ + VA G +F +S
Sbjct: 151 SLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLS 210
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G + +G + L N P+ V++LK + VV IS + H
Sbjct: 211 GTSFGWGSNNAGQLAFFG-----SNVPVQSYKPRSVSALKTLG--VVYISCGHE-----H 258
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T LT++GK++ FG GQLG
Sbjct: 259 TAVLTQNGKVFTFGDNSCGQLG 280
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
A+G H+ ++ DG V + G G LG + E PK +QAL ++ V+ G +
Sbjct: 40 ASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSL 99
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
V G V+++G G LG + L PQ + +L + +++Q+S N
Sbjct: 100 AVCYKGRVFAWGAGSEGQLGIGEFKEIN-------LIPQKIKTLTGI--KIIQVSCGN-- 148
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+ AL+E G+++++G+ GQLG L + +P+RV
Sbjct: 149 ---YHSLALSEDGQVFSWGSNSHGQLG--LGKELPSQASPQRV 186
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 4201 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 4253
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 4254 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGK 4311
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ +G VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 4312 HCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA 4370
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 4371 --SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDD 4425
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++G
Sbjct: 4426 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK 4485
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A +++G
Sbjct: 4486 GDFHRLGHGSV--------EHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDAG 4530
Query: 500 KLYAFGAGDKGQLG 513
+++ +G D+GQLG
Sbjct: 4531 EVFTWGDNDEGQLG 4544
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 17/353 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ V S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 3099 IAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 3158
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3159 HALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDIACGSSHSAAIS 3216
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G A
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALSGRRVIQVACGSRDAQTLALTEDG-A 3274
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 3275 VFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 3332
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 3333 GDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 3389
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
G GN N P LV L V V ++S+ W +L E +
Sbjct: 3390 ----QGSGNTFVNK-KPALVIGLDAVIVNRVACGSSHSMAWGLPNASLDEEKR 3437
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P ++ +R I A G+ ++S G+VYA G+
Sbjct: 3062 TVMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEG 3121
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 3122 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P L+ L + IA G + A++ Q +Y+ G G G+LGHG
Sbjct: 3180 LGHGNRSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3235
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 3236 DNATQLKPKLVAA--LSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3293
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
S P ++ L+ + I + G + ++ G+V+++G G+ LGH G++H
Sbjct: 3294 SSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3345
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3346 VRKPQPIAGLR--GHRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3391
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G ++ P + SLQ + + + A +G
Sbjct: 4251 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGG 4310
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A +
Sbjct: 4311 KHCLALTTDGEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAI 4368
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 4369 TASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CITDDD 4426
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G V TWG
Sbjct: 4427 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWG 4484
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ E PK V AL K I +ATG S+ G+V+++G + LG
Sbjct: 4485 KGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG 4544
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 4545 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 4581
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G F AV S Y++ G+ RLGH D L +E++ V + + YC
Sbjct: 655 GRHFLAVDS-NFNAYSWGVGDSRRLGH----GDCHARELPTKIESL-VRLVKSVYCGCSY 708
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
A G +Y+ G G G+LGHG+ D+ P ++ + + V + +G H +
Sbjct: 709 SAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTS 768
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+G V WG G YG LG+G+ +P+++ L V+ V G + +S +G +YS+
Sbjct: 769 EGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQ--RVFAGAQFSLALSCEGQLYSW- 825
Query: 439 CGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G+++ LGH + QG P+L+T L+ ++R+V +++ AH AL+
Sbjct: 826 -GKASCLGHQLVERNVQGCS-----VPRLITGLQ--HKRIVDVAVG-----VAHCLALSS 872
Query: 498 SGKLYAFGAGDKGQL 512
SG+++ +G D Q+
Sbjct: 873 SGEIFGWGRNDNQQI 887
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGY 313
Q A +LS+EG++Y + H + EP L + N + IAA +
Sbjct: 604 QVACSEDVVLLLSKEGKLYNW----------HIAKPEAEPQQLDFAEIANETFISIAA-H 652
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
C S YS G G +LGHG + P IE L V G ++
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRLVKS---VYCGCSYS 709
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSED 431
A + G + TWG G YG LGHG + + +P +V AL D + + VA +GD T ++ +
Sbjct: 710 AAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G V+++G G+ LG +G N + L PQL+ L +V ++ A
Sbjct: 770 GLVFAWGDGDYGKLG-----NGSCN---SSLLPQLIDCLPRVQR----------VFAGAQ 811
Query: 492 -TFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+ AL+ G+LY++G LG +LV +
Sbjct: 812 FSLALSCEGQLYSWGKASC--LGHQLVERNVQ 841
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 98/174 (56%), Gaps = 13/174 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G +Y++G + G+LGHGT++++ P + +L+ +++ A G+G T+
Sbjct: 705 GCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTL 764
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G V+A+G +G+ G + L+ PQL++ L + V A G F+ LS EG
Sbjct: 765 CLTSEGLVFAWGDGDYGKLGNGSCNSSLL--PQLIDCLPRVQRVFA--GAQFSLALSCEG 820
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 320
++Y SWG + LGH +V+ P + G L++ +V +A G + LAL+
Sbjct: 821 QLY--SWGKASCLGHQLVERNVQGCSVPRLITG-LQHKRIVDVAVGVAHCLALS 871
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 17/238 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA-AGAGRTMLISD 214
H +AV S YS+G S +LGHG P I SL +R++++ G + I+
Sbjct: 657 HFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITL 714
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRV 272
G +Y +G+ ++G +G + + P +V +LK+ VV A+ G+ T L+ EG V
Sbjct: 715 GGNLYTWGRGTYGRLGHGTSDDQCL--PAMVMALKDHQVVDVALGSGDAHTLCLTSEGLV 772
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSV 331
+ + G+ +LG+ + + + P ++ +P VQ + AG + LAL+C+ +
Sbjct: 773 FAWGDGDYGKLGNGSCNSSLLPQ----LIDCLPRVQRVFAGAQFSLALSCEGQLYSWGKA 828
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
C LG +L + PRLI Q + + V VA G H + G + +GWGR
Sbjct: 829 SC-LGHQLVERNVQGCSVPRLITGLQ--HKRIVDVAVGVAHCLALSSSGEI--FGWGR 881
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 3310 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALH 3369
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L + V + A G+
Sbjct: 3370 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVIVNRVACGS 3419
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++ +TS+G+V+++G G+LG+G+ P+ I L R+ + AGA ++
Sbjct: 758 SGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLP--RVQRVFAGAQFSLA 815
Query: 212 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+S GQ+Y++GK S G E VQG + P+L+ L++ +V A+G LS
Sbjct: 816 LSCEGQLYSWGKASCLGHQLVERNVQGCSV---PRLITGLQHKRIVDVAVGVAHCLALSS 872
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-----TLENIPVVQIA 310
G + F WG + P V PLL TL +P IA
Sbjct: 873 SGEI--FGWGRND--NQQICPASVCSEPLLRQPIQVTLPTLPASGIA 915
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVY++G DS + + G+ G+ + + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYSWGLDS--DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVY 329
V+ + +LG + L+ +L IP +Q+AAG + ++L L SG A++
Sbjct: 158 VFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL----SG-AIF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V + G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 449 AIAD 452
+ ++
Sbjct: 331 STSN 334
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY++ +D +LG
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLL 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L +I +VQ+A GY + LAL+ V+ G G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCK 176
Query: 347 EK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
++ P+LI+ LL + + VAAG H+ V+ G + WG ++G LG +E VP
Sbjct: 177 KQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
++++L K +++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ---- 520
+VT + + HT A SG++Y+FG G GQLG +N+
Sbjct: 295 IVTQVACGRQ---------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 339
Query: 521 TERGN 525
T +GN
Sbjct: 340 TVKGN 344
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VYS+G +S GQLG +EE R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G + VL+ G
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ VA G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS ++ K P ++
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 181/374 (48%), Gaps = 34/374 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
RR + A++ G S +Y +G N GQLG P P +L +R +Q A
Sbjct: 2964 RRPDDWALSWGGAS-------TIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLA 3016
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNF 261
G ++ G+++A G S G G + + P L+ SL+++FV + A+ G
Sbjct: 3017 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAI--PTLLGSLQHVFVKKVAVNSGGK 3074
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ EG VY + G D +LGH + P L+ L + V IA G + A+
Sbjct: 3075 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGMNVADIACGSAHSAAITA 3133
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQD 379
SG V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D
Sbjct: 3134 --SGH-VLTWGKGRYGRLGHGDSEDQLRPQLVE--ALLGYRAIDIACGSGDAQTLCITDD 3188
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + +P +++L + I V G + +++ G VY++
Sbjct: 3189 DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSK 3248
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG
Sbjct: 3249 GDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSG 3293
Query: 500 KLYAFGAGDKGQLG 513
++Y +G D+GQLG
Sbjct: 3294 EVYTWGDNDEGQLG 3307
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 17/353 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ + + G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 1870 IAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 1929
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L++ + A G+ +A +S
Sbjct: 1930 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAAIS 1987
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L V+Q+A G LA G +
Sbjct: 1988 SQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVIQVACGSRDAQTLALTEDG-S 2045
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + + + GA + + + G V TWG
Sbjct: 2046 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLALTRAGEVWTWGK 2103
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 2104 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 2160
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
G GN N P LV L V V ++SI W L E +
Sbjct: 2161 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNATLEEEKR 2208
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 27/353 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V +G N QLG + P +++ +R I A G+ ++ G+VYA G+
Sbjct: 1833 TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEG 1892
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDAR 282
+ G GV T V P + L V + A+ G L+ +G+V+++ G D +
Sbjct: 1893 TNGRLGLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 1950
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH +P L+ TL + + +A G + A++ Q +Y+ G G G+LGHG
Sbjct: 1951 LGHGNRTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 2006
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 400
+ P+L+ L + + VA G+ A + +DG V +WG G +G LG G E
Sbjct: 2007 DNATQLKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEG 2064
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
P ++ L+ + I + G + ++ G+V+++G G+ LGH G++H
Sbjct: 2065 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 2116
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V PQ + L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 2117 VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2162
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 23/352 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG- 207
Q G AVT G +++ G S G+LG G + P + SLQ + + + A +G
Sbjct: 3014 QLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGG 3073
Query: 208 -RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ G+VYA+G+ G+ +G + + P+LVE L + V A G+ +A +
Sbjct: 3074 KHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAI 3131
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G V T+ G RLGH + + P L+ L + IA G L C
Sbjct: 3132 TASGHVLTWGKGRYGRLGHGDSEDQLRPQ-LVEALLGYRAIDIACGSGDAQTL-CITDDD 3189
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLG G K P IE L L + V G+ + + + G V TW
Sbjct: 3190 NVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIKVECGSQFSVALTKSGAVYTWS 3247
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + LGHG+ + PK V AL K I +ATG S+ G+VY++G + LG
Sbjct: 3248 KGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 3307
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ Q P+LV +L+ + +V+++ +AHT AL+ S
Sbjct: 3308 DGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHTLALSTS 3344
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 2081 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 2140
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 2141 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 2190
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+V ++G VY+ G G
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 1893
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 1894 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 1940
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 1941 FSWGEGEDGKLG---HGNRTTLDKPRLVE 1966
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 162/328 (49%), Gaps = 25/328 (7%)
Query: 111 KPMTEAERQDLKQ-KCGGSWK-LVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYS 168
KP+ A R D++ CGG LV + +A G H+ AVT G +Y+
Sbjct: 199 KPLEFAVRLDVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYT 258
Query: 169 FGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+G + G LGHG W P+ + L+GI + + G T L++ AGQ++ FG S
Sbjct: 259 WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS 318
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREGRVY 273
FG +G + + ++ P+ VESLK + V+AA G + TA + G+++
Sbjct: 319 FGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIF 376
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
T+ G+ RLGH + + P + +E Q+A G+C +AL + VY++G
Sbjct: 377 TWGDGDKGRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHCLTVALT---TSGHVYTMGS 432
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
+ G+LG+ ++ D P +E N + + GA+H AV+ V TWG G G L
Sbjct: 433 AVYGQLGN-AQADGMLPVRVEGKLYKNFVEEI-SCGAYHVAVLTSRTEVYTWGKGANGRL 490
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATG 421
GHG+ E ++ P +V+AL D + +V G
Sbjct: 491 GHGDTEDKNTPTLVEALKDKQVRNVVCG 518
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG E PR + SL+G+R ++AA G T +
Sbjct: 298 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 357
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLV--PTCVAALVEPNFCQVACGH 415
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 416 CLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLYKNFVEEISCGAYHVAVLT 474
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 475 ---SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAICIHKWV 531
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 532 SGVDQSMCS 540
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 128/287 (44%), Gaps = 38/287 (13%)
Query: 243 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLL 298
+L+++L ++ + A G + T ++ G +YT WG+ LGH + + P +
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVN 284
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G LE I V I+ G + A S +++ G G G LGHG R PR +E +
Sbjct: 285 GPLEGIHVSSISCGPWHT---ALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK- 340
Query: 359 LNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKV 406
L+ V A G WH A V + G++ TWG G G LGHG++E + VP
Sbjct: 341 -GLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTC 399
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
V AL + VA G T ++ G VY+ G LG NA ADG + P
Sbjct: 400 VAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADG--------MLPVR 450
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V K V +IS Y H LT ++Y +G G G+LG
Sbjct: 451 VEG-KLYKNFVEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 491
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L+ L ++ + +A G + A+ + + G G LGHG+ P+ +
Sbjct: 228 LIDALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG- 285
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L + ++ G WH A+V G++ T+G G +G LGHG+ E SVP+ V++L ++ +
Sbjct: 286 PLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTV 345
Query: 417 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
A G + T V E G ++++G G+ LGH G++ L P
Sbjct: 346 RAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGH-------GDKEPK-LVP 397
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
V +L + N Q++ + + T ALT SG +Y G+ GQLG N Q +
Sbjct: 398 TCVAALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NAQADGM 446
Query: 525 NPERVDIDL 533
P RV+ L
Sbjct: 447 LPVRVEGKL 455
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 178/381 (46%), Gaps = 40/381 (10%)
Query: 142 CCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
CC + Q G HS+ + G V+++G N +GQLG GTT ++ L+ +
Sbjct: 31 CCSLFAAVPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLE--DV 88
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AAG + + G V+A+G + FG+ G + +P V+++K++ + A G
Sbjct: 89 VSIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENR--NTPVKVKTIKDVTEIDA--G 144
Query: 260 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L +G V+ WGN+ +LG T+ + +P + G L N VV ++ G + L
Sbjct: 145 FYHSIALQSDGTVWV--WGNNELDQLGDGTKSDAYKPMQVQG-LNN--VVAVSGGNHHNL 199
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L + ++ G G+LG G+ T+ P + F V +A+G + V
Sbjct: 200 VLKADGT---IWGWGANGYGQLGDGTMTESSIPTPVYDFN----GAVFIASGNNYNVAVK 252
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG + WG YG LG+G + +P + LN+ ++ +ATG Y ++ +DG V S
Sbjct: 253 ADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNN--SVSIATGGYHALILQQDGTVLSM 310
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG A ++ Q T V L V +S+ Y H+ AL +
Sbjct: 311 GYNRTGQLGTGATSNYQ-------YTTLKVHGLSDV------VSIAAGYY---HSLALKK 354
Query: 498 SGKLYAFGAGDKGQLGIELVN 518
G ++A+G + GQLG +N
Sbjct: 355 DGTIWAWGNNEYGQLGDGTLN 375
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 17/265 (6%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
++ ++ AG HSIA+ S G V+ +G+N QLG GT + ++P ++ L ++ +
Sbjct: 136 KDVTEIDAGFYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN--NVVAVSG 193
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G +++ G ++ +G + +G+ G + +P + + +F+ A GN +
Sbjct: 194 GNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIPTP-VYDFNGAVFI---ASGNNYNV 249
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ +G ++ + +LG+ T+ N P + G L N V IA G + AL Q
Sbjct: 250 AVKADGSIWGWGMNTYGQLGNGTQTNSKIPIRING-LNN--SVSIATGGYH--ALILQQD 304
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 383
G V S+G G+LG G+ ++ ++ L ++ L VV +AAG +H+ + +DG +
Sbjct: 305 G-TVLSMGYNRTGQLGTGATSNYQYTTL----KVHGLSDVVSIAAGYYHSLALKKDGTIW 359
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQ 408
WG YG LG G + +P + Q
Sbjct: 360 AWGNNEYGQLGDGTLNYKKLPILSQ 384
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 182/386 (47%), Gaps = 27/386 (6%)
Query: 80 FFRQPANFAPDYQLSISELAALDMCQKRAIFKPMT-EAERQDLKQKCG-------GSWKL 131
+QPA + + SI +LAAL +PM + E CG G+
Sbjct: 287 LMKQPATSSVNLDTSICKLAALKE-------QPMYGKCEASGELYSCGQNSYGELGTGDD 339
Query: 132 VLRFLLAGEACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEE-WRPR 189
+ R L + C ++ + +A ++AV T+ GVV + G N SGQ G G +E R
Sbjct: 340 IERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLR 399
Query: 190 PIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+++L Q ++ I A+ G + ++D+G Y++G + G+ + TK V P+L+ES
Sbjct: 400 PVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTK-VHVPKLIES 458
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
LK+ + A++ +AV++ G +Y F + +LG + P L+ E +
Sbjct: 459 LKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQ-LVKGFEGTEIS 517
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
+A G + + C +G +++ G G+LG G K L+ L N VA
Sbjct: 518 MVACGLYH--TIICTATG-GLFACGKNDYGQLGLGHNRQIKVASLV---SLPNEMVSYVA 571
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
+G +H+ VV GR ++G YG LG GN+ ++VP VV + + + G Y T +
Sbjct: 572 SGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVL 631
Query: 428 VSEDGDVYSFGCGESASLGHNAIADG 453
+SE G V+ FG LG+ AD
Sbjct: 632 LSEQGQVFVFGRNNKGQLGNRGSADA 657
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 26/355 (7%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
+ G +YS G NS G+LG G E + I I Q A+G ++++ G V
Sbjct: 319 ASGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTC 378
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
G + G+ G + V + V++L++ + + A+ G L+ G Y++ + +
Sbjct: 379 GLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYND 437
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LGH V L+ +L++ + + Y + + SG +Y+ G G+L
Sbjct: 438 RGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHH--SAVITDSG-ELYAFGMNDCGQL 494
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G + P+L++ F+ + +VA G +H + G + G YG LG G+
Sbjct: 495 GLDHTQHQSTPQLVKGFEGTEIS--MVACGLYHTIICTATGGLFACGKNDYGQLGLGHNR 552
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR-H 458
V +V N++ + +VA+G Y + VV+ G +SFG + LG GN+ H
Sbjct: 553 QIKVASLVSLPNEMVS-YVASGYYHSVVVTNSGRTFSFGRNDYGQLG-------IGNKVH 604
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
NV P +V N R+V+ T Y HT L+E G+++ FG +KGQLG
Sbjct: 605 QNV--PNVVA--LSANTRMVRA--TCGCY---HTVLLSEQGQVFVFGRNNKGQLG 650
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 32/306 (10%)
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
+G++Y+ G++S+GE G + + + +I Q A GN AVL+ +G V T
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIR--QVASGNETLAVLTNDGVVLT 377
Query: 275 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ G H + + P+ L + V IAA +A SG+A YS G
Sbjct: 378 CGLNKSGQCGQGHFDERVMMLRPV-QALRSQRVKFIAASNGCEHMIALTDSGLA-YSWGY 435
Query: 334 GLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LGH + T + H P+LIE + L+ V+ H+AV+ G + +G G
Sbjct: 436 NDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYH--HSAVITDSGELYAFGMNDCGQ 493
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES----ASLGHN 448
LG + + +S P++V+ + VA G Y T + + G + F CG++ LGHN
Sbjct: 494 LGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGL--FACGKNDYGQLGLGHN 551
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
R V + + SL NE V S S Y+ H+ +T SG+ ++FG D
Sbjct: 552 --------RQIKVAS---LVSLP--NEMV---SYVASGYY--HSVVVTNSGRTFSFGRND 593
Query: 509 KGQLGI 514
GQLGI
Sbjct: 594 YGQLGI 599
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 102/230 (44%), Gaps = 37/230 (16%)
Query: 307 VQIAAGYCYLLALACQP------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
V + C L AL QP + +YS G G+LG G IE+ QL +
Sbjct: 296 VNLDTSICKLAALKEQPMYGKCEASGELYSCGQNSYGELGTGDD--------IERHQLTS 347
Query: 361 LQPV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND- 412
+ VA+G AV+ DG V T G + G G G+ +E + + VQAL
Sbjct: 348 ISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQ 407
Query: 413 -VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
VK I + G +++ G YS+G + LGH N V P+L+ SLK
Sbjct: 408 RVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHE-------NLTTKVHVPKLIESLK 460
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
R +S H+ +T+SG+LYAFG D GQLG++ +Q+
Sbjct: 461 DKKLRYASVSY-------HHSAVITDSGELYAFGMNDCGQLGLDHTQHQS 503
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E S G H+I T+ G +++ G N GQLG G + + + SL + A+G
Sbjct: 515 EISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQ-IKVASLVSLPNEMVSYVASG 573
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+++++++G+ ++FG++ +G+ G + + V P +V N +V+A G + T +
Sbjct: 574 YYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNV--PNVVALSANTRMVRATCGCYHTVL 631
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGY 313
LS +G+V+ F N +LG+ + + P PL E V +AAG+
Sbjct: 632 LSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGF 681
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S +G HS+ VT+ G +SFG N GQLG G + P + R+++A G
Sbjct: 568 SYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCY 627
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVL 266
T+L+S+ GQV+ FG+++ G+ L+ P V KN V A G + T+++
Sbjct: 628 HTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLI 687
Query: 267 SREGR 271
R
Sbjct: 688 VERKR 692
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 173/374 (46%), Gaps = 34/374 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 213
H+ +T G ++++G+N+SGQLGHG + + P+R SL+ I+ + G T++I
Sbjct: 1205 HAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVID 1264
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
+ +Y++G +G+ +GV + P+ +E + A G + T VL G ++
Sbjct: 1265 RSFHIYSWGNGKYGQLGHGVSTPHNL--PKRIEEFAGQKISSIATGYWHTLVLRSGGDLF 1322
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGM 326
F +LG ND++ H + T N + A + + C + S
Sbjct: 1323 AFGSNEHGQLG----LNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHG 1378
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VYS G G+LGHGS ++P+LI+ + N++ + G +H V V WG
Sbjct: 1379 DVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKR--ITCGPYHTVVTTDLDSVYCWG 1436
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED-------GDVYSFGC 439
G + CLG G+ + E VPK+V+ + + V G Y T +++ G+VY G
Sbjct: 1437 QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGS 1496
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
E LG I + + P ++ S+ N + L + +NA +T +G
Sbjct: 1497 SEHGKLG---IGGDPRSPSLDKAYPAIIPSINSANV----VDLASGAEFNA---LITSNG 1546
Query: 500 KLYAFGAGDKGQLG 513
LY +GAG GQ+G
Sbjct: 1547 ALYMWGAGTHGQIG 1560
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 170/401 (42%), Gaps = 38/401 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ + +YS+G+ GQLGHG + P+ I G +I A G T+++
Sbjct: 1256 GGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVL 1315
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTK-------LVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++AFG + G+ G+ K V + + + + V G+ + +
Sbjct: 1316 RSGGDLFAFGSNEHGQL--GLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVL 1373
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ G VY+F +LGH + + P + G L+ + +I G + + S
Sbjct: 1374 RTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITCGPYHTVVTTDLDS- 1431
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD------ 379
VY G G LG GS +E P+L+E F +N + V G +H A + Q
Sbjct: 1432 --VYCWGQGEHMCLGTGSNKNELVPKLVELF--VNKRVERVVCGLYHTATLTQPMGDSNT 1487
Query: 380 -GRVCTWGWGRYGCLGHGNEE-----CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
G V G +G LG G + ++ P ++ ++N + +A+G +++ +G
Sbjct: 1488 GGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGA 1547
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ-----ISLTNSIYW 488
+Y +G G H I +G+ N+ + T ++S K N+ +V I+L++S+
Sbjct: 1548 LYMWGAGT-----HGQIGNGK-NQDTWIPTRVSLSSEKNQNQFIVDESGSTITLSSSMLL 1601
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
T+ G G ++N + GN + V
Sbjct: 1602 TEKNNRYTQEGLEETLRKNANGYRPFVVINKAKQFGNWDAV 1642
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 33/303 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--------SLQGIRI 199
S G H++ + S G +++FGSN GQLG + P P R + Q R+
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHL-PIPTRVNTADIHHAGQPTRV 1361
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
G ++L + G VY+FG ++ G+ +G T+ P+L++ LK + + G
Sbjct: 1362 TGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHG--STESCRYPKLIQGLKGKNIKRITCG 1419
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ T V + VY + G LG + N++ P L+ N V ++ G Y A
Sbjct: 1420 PYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPK-LVELFVNKRVERVVCG-LYHTAT 1477
Query: 320 ACQPSGMA-----VYSVGCGLGGKLGHGS-----RTDEKHPRLIEQFQLLNLQPVVVAAG 369
QP G + VY G GKLG G D+ +P +I N+ V +A+G
Sbjct: 1478 LTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANV--VDLASG 1535
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
A A++ +G + WG G +G +G+G + +P V +L+ K + F+V
Sbjct: 1536 AEFNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV-SLSSEK-------NQNQFIVD 1587
Query: 430 EDG 432
E G
Sbjct: 1588 ESG 1590
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDY 423
V+ G HAAV+ DG + TWG G LGHG + +S P V++L + ++ G
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ-ISL 482
T V+ +YS+G G+ LGH V TP + K++ E Q IS
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLGH------------GVSTPHNLP--KRIEEFAGQKISS 1304
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ YW HT L G L+AFG+ + GQLG+
Sbjct: 1305 IATGYW--HTLVLRSGGDLFAFGSNEHGQLGL 1334
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
N+ A V+ G V++ DG+++++G S LGH +A G +H + TP V S
Sbjct: 1191 FNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGH-GLAAG---KHQS--TPMRVES 1244
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
LKQ ++ +SL HT + S +Y++G G GQLG
Sbjct: 1245 LKQT--PIMMMSLGGE-----HTVVIDRSFHIYSWGNGKYGQLG 1281
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 160/340 (47%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G+ L + G+V+ +G++ G +G + P+LVES
Sbjct: 266 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVES 323
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V A G F T V++ G +Y WG N LGH T + P + G LE
Sbjct: 324 LAVSNVEYIACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 381
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + A S +++ G G G LGHG R +P+ +E L +
Sbjct: 382 LQVLSVACGSWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRA 436
Query: 364 VVVAAGAWHAAVV----GQ------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ VA G WH+A + GQ ++ TWG G LGHG++E + VP VQAL D
Sbjct: 437 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 496
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T ++ G V++ G + LG N ADG+ P +V K
Sbjct: 497 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLG 546
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
NE V +IS ++ H ALT ++Y +G G G+LG
Sbjct: 547 NELVEEISCGSN-----HVAALTSRSEVYTWGMGANGRLG 581
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ VT+ G +Y +G S +G LGHGT W P+ + L+G++++
Sbjct: 328 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 387
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G+ + L +G+++ FG +FG +G + + V P+ VE+L ++ A G +
Sbjct: 388 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 445
Query: 263 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+A + + +++T+ G+ RLGH + + P + L + Q+A G
Sbjct: 446 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 504
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ +ALA + V+++G G+LG+ + D K P ++ Q +L N ++ G+ H
Sbjct: 505 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 559
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
A + V TWG G G LGHG+ E + P +V AL D ++ G ++TT +
Sbjct: 560 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 615
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 153/322 (47%), Gaps = 43/322 (13%)
Query: 212 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
I G VY +G+ S G + Y T + P+ +ES + V Q A G+ +
Sbjct: 231 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 289
Query: 266 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+R+G V+T WG + RLGH T+ + P L+ +L V IA G + +
Sbjct: 290 TTRQGEVFT--WGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEFHTCVVTASG 346
Query: 324 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+Y G G G LGHG+ P+ + L LQ + VA G+WH+A+ G+
Sbjct: 347 D---LYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 402
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 431
+ T+G G +G LGHG+ E + PK V+AL+ +A+ VA G + + + E
Sbjct: 403 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 462
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
++++G G+ LGH G++ A L P V +L V+ Q++ +S+
Sbjct: 463 RKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQAL--VDHNFHQVACGHSM----- 507
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T AL SG ++ G+ + GQLG
Sbjct: 508 TVALATSGHVFTMGSSNNGQLG 529
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 31/380 (8%)
Query: 138 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 197
AG + +A A P + T V +G N QLG + P +++ +
Sbjct: 2619 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 2674
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R I A G+ ++S G+VYA G+ + G GV T V P + L V + A
Sbjct: 2675 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLHQYVVKKVA 2732
Query: 258 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G L+ +G+V+++ G D +LGH +P L+ L + +A G +
Sbjct: 2733 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 2791
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
A++ Q +Y+ G G G+LGHG T + P+L+ L + V VA G+ A
Sbjct: 2792 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGSRDAQT 2846
Query: 376 VG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+
Sbjct: 2847 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGE 2906
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
V+++G G+ LGH G++H V PQ + L+ RV+ +++ H
Sbjct: 2907 VWTWGKGDYYRLGHG------GDQH--VRKPQPIGGLR--GRRVIHVAVGA-----LHCL 2951
Query: 494 ALTESGKLYAFGAGDKGQLG 513
A+T++G++YA+G D GQ G
Sbjct: 2952 AVTDAGQVYAWGDNDHGQQG 2971
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 161/341 (47%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAG 207
IAG S+ + S+ G VY+ G ++G+LG G T P P+ ++ + +G
Sbjct: 2679 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGK 2738
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 2739 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 2796
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +YT+ G RLGH ++P L+ L VVQ+A G LA G A
Sbjct: 2797 SQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDAQTLALTEDG-A 2854
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G GKLG G P IE+ + + V + GA + + + G V TWG
Sbjct: 2855 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLALTRAGEVWTWGK 2912
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G +
Sbjct: 2913 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ--- 2969
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
G GN N P LV L V V ++SI W
Sbjct: 2970 ----QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 3005
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ G HS A++S+G +Y++G G+LGHG + +P+ + +L G R+
Sbjct: 2775 EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRV 2834
Query: 200 IQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+Q A G+ +T+ +++ G V+++G FG + G G++ +P +E L I VVQ
Sbjct: 2835 VQVACGSRDAQTLALTEDGAVFSWGDGDFG--KLGRGGSEGSDTPHEIERLSGIGVVQIE 2892
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G F+ L+R G V+T+ G+ RLGH + + +P P +G L V+ +A G + L
Sbjct: 2893 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQP-IGGLRGRRVIHVAVGALHCL 2951
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
A+ VY+ G G+ G G+ K P L+
Sbjct: 2952 AVT---DAGQVYAWGDNDHGQQGSGNTFVNKKPALV 2984
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQ 255
+I Q A + +++S G++Y + + + EAE P +E + ++F+
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEVAHDVFISI 273
Query: 256 AA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
A G F A+ S Y++ G D RLGH P + LE V + G
Sbjct: 274 AGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGC 331
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y A+ C G + + G G +LGHG+ D P L+ + V + +G H+
Sbjct: 332 SYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHS 388
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +G V WG G YG LG+GN P +V++L V+ V G + +S +G
Sbjct: 389 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSEGQ 446
Query: 434 VYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+Y++ G++ LGH + QG P+LV+SL+ ++R+V ++++ AH
Sbjct: 447 LYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRIVDVAVS-----VAHC 492
Query: 493 FALTESGKLYAFGAGDKGQL 512
AL+ SG+++ +G D Q+
Sbjct: 493 LALSSSGEVFGWGRNDSQQI 512
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQAAIGNFFTAVLSREGRV 272
++YA G S + + G ++ V +L F + Q A +LS+EG++
Sbjct: 188 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 247
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
YT+ + EP P+ ++ + AG+C S YS G
Sbjct: 248 YTWRLAKP----------EAEPLPMEEVAHDVFIS--IAGHCEGRHFLAIDSNHNAYSWG 295
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G +LGHG P I + +Q V G ++A + G + TWG G Y
Sbjct: 296 TGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAITCGGNLLTWGRGTYAR 353
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LGHGN + S+P +V AL+D + VA +GD + ++ +G V+++G G+ LG+
Sbjct: 354 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN--- 410
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
GN + + L P LV SL +V +RV S + AL+ G+LY +G
Sbjct: 411 ----GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSVALSSEGQLYTWGKATC- 455
Query: 511 QLGIELVNNQTE 522
LG +LV +
Sbjct: 456 -LGHQLVERSVQ 466
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHG + +P+PI L+G R+I A GA
Sbjct: 2890 QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH 2949
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++DAGQVYA+G + G+ G T + P LV L +FV + A G+
Sbjct: 2950 CLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGS 2999
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+TS+G+V+++G G+LG+G +P + SL R+ + AG+ ++
Sbjct: 383 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVA 440
Query: 212 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+S GQ+Y +GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 441 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 497
Query: 269 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT 300
G V F WG ND++ P V PLL T
Sbjct: 498 SGEV--FGWGRNDSQ---QICPASVSSEPLLRT 525
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T G + ++G + +LGHG +++ P + +L ++ A G+G ++
Sbjct: 330 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 389
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 390 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 445
Query: 271 RVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 320
++YT WG LGH V+ P L+ +L++ +V +A + LAL+
Sbjct: 446 QLYT--WGKATCLGHQLVERSVQGCSVPR-LVSSLQHKRIVDVAVSVAHCLALS 496
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+ S YS+G+ +LGHG T P I +L+ + G + I+
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 340
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G + +G+ ++ +G + + P LV +L + VV A+ G+ + L+ EG V+
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVF 398
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 332
+ G+ +LG+ ++P +E++P VQ + AG + +AL+ + + +
Sbjct: 399 AWGDGDYGKLGNGNCNGSLQPI----LVESLPRVQRVFAGSQFSVALSSE-GQLYTWGKA 453
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
LG +L S PRL+ Q + + V VA H + G V +GWGR
Sbjct: 454 TCLGHQLVERSVQGCSVPRLVSSLQ--HKRIVDVAVSVAHCLALSSSGEV--FGWGR 506
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ G G
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 2702
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ L G G H NV P + L Q + V + H ALT GK+
Sbjct: 2703 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 2749
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVD 530
+++G G+ G+LG N+T P V+
Sbjct: 2750 FSWGEGEDGKLG---HGNRTTLDKPRLVE 2775
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAA 204
+ AG S+A++S+G +Y++G + LGH E + PR + SLQ RI+ A
Sbjct: 430 RVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 487
Query: 205 GAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 245
+ +S +G+V+ +G+ DS V L+ +P LV
Sbjct: 488 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 529
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 152/285 (53%), Gaps = 24/285 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G + G LGHG W P+ I +L+G+++ + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
LI+ GQ++ FG SFG +G K V+ P+ VESL + + A G + TA
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 265 VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+++R G+++T+ G+ RLGH + ++P + TL + ++A G+
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVATLIDHDFYRVACGHSLT 313
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL SG V S+G + G+LG+ +D + P L+E +++ Q + +A G++H AV+
Sbjct: 314 VALT--TSGQ-VLSMGNAVYGQLGN-PHSDGRIPCLVED-KIVGEQVLQIACGSYHVAVL 368
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP +V+AL D ++A G
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACG 413
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 151/341 (44%), Gaps = 37/341 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L+ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH + P + G LE +
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQ 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + + S +++ G G G LGHG +PR +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
VA G WH A + + G++ TWG G LGHG++E P V L D
Sbjct: 241 VACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID 300
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
VA G T ++ G V S G NA+ GN H++ P LV K
Sbjct: 301 HDFYRVACGHSLTVALTTSGQVLSMG---------NAVYGQLGNPHSDGRIPCLVED-KI 350
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V E+V+QI+ + H LT +++ +G G G+LG
Sbjct: 351 VGEQVLQIACG-----SYHVAVLTNRSEVFTWGKGANGRLG 386
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
Length = 1413
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 168/381 (44%), Gaps = 37/381 (9%)
Query: 134 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 193
R + G SQ AG H++ + G V++ G+N +GQLG GTT R P++
Sbjct: 1028 RGISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTIN--RSTPVQV 1085
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
+I A G T+ + V+A+G +S+G+ G + + +P V L NI
Sbjct: 1086 SGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNIIA 1143
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
+ A G T L +G V+ + + +LG + N P + G + V+ IA Y
Sbjct: 1144 I--AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---VIAIAGEY 1198
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-H 372
+ +AL + V++ G G+LG GS T+ P Q+ L V+ AG + H
Sbjct: 1199 VHTVALKSDGT---VWAWGYNGYGQLGDGSTTNRSTP-----VQVSGLTDVIAIAGGYVH 1250
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ DG V TWGW G LG G P V L D AI +A GDY T + D
Sbjct: 1251 TIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDN 1308
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
V+++G LG DG N LTP V+ L I++ Y HT
Sbjct: 1309 TVWAWGSNSYGQLG-----DGT---TINRLTPVQVSGLTDA------IAIAGGDY---HT 1351
Query: 493 FALTESGKLYAFGAGDKGQLG 513
AL ++A+G+ GQLG
Sbjct: 1352 IALKSDNTVWAWGSNSYGQLG 1372
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 148/307 (48%), Gaps = 25/307 (8%)
Query: 150 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIAG H+IA+ S G V+++G+N GQLG G+T + R P++ +I A G
Sbjct: 197 AIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTD--RSTPVQVSGLTDVIAIAGGYAH 254
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ + G V+A+G + G G + + P V L ++ + A GN T L
Sbjct: 255 TIALKSDGTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDVIAI--AGGNAHTIALKS 310
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G V+ +WG++ +LG + N P + G + V+ IA GY + + L +
Sbjct: 311 DGTVW--AWGDNEGGQLGDGSTTNRSTPVKVSGLAD---VIAIAGGYSHTIVLRSDGT-- 363
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
V++ G GG+LG GS T+ P Q+ L V+ +A G +H V DG + W
Sbjct: 364 -VWTWGHNEGGQLGDGSTTNRSTP-----VQVSGLADVIAIAGGVYHTIAVKSDGTMWAW 417
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G+ YG LG G S P V L DV AI A G Y T + DG V+++G L
Sbjct: 418 GYNWYGQLGDGTTINSSTPVQVNGLTDVIAI--AGGYYHTIAMKSDGAVWTWGFNYYGQL 475
Query: 446 GHNAIAD 452
G +I +
Sbjct: 476 GDGSITN 482
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 173/377 (45%), Gaps = 41/377 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ AG H++ + G V+++G+N +GQLG +T R P++ +I A GA
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTN--RSTPVQVSGLTDVIAIAGGAY 203
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ + G V+A+G + G + G T ++P V L ++ + A G T L
Sbjct: 204 HTIALKSDGTVWAWGNNEGG--QLGDGSTTDRSTPVQVSGLTDVIAI--AGGYAHTIALK 259
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+G V+ +WG++ RLG + N P + G + V+ IA G + +AL +
Sbjct: 260 SDGTVW--AWGDNEGGRLGDGSTTNRSIPVKVGGLSD---VIAIAGGNAHTIALKSDGT- 313
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCT 384
V++ G GG+LG GS T+ P ++ L V+ AG + H V+ DG V T
Sbjct: 314 --VWAWGDNEGGQLGDGSTTNRSTP-----VKVSGLADVIAIAGGYSHTIVLRSDGTVWT 366
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LG G+ S P V L DV AI A G Y T V DG ++++G
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVYHTIAVKSDGTMWAWGYNWYGQ 424
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG DG N TP V L V I++ Y HT A+ G ++ +
Sbjct: 425 LG-----DGT---TINSSTPVQVNGLTDV------IAIAGGYY---HTIAMKSDGAVWTW 467
Query: 505 GAGDKGQLGIELVNNQT 521
G GQLG + N++
Sbjct: 468 GFNYYGQLGDGSITNRS 484
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 20/293 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+IA+ S G V+++G N+SGQLG GTT R P++ + +I A G T+ +
Sbjct: 652 HTIALKSDGTVWTWGWNNSGQLGDGTTIN--RSTPVQVIGLTDVIAIAGGDYHTIALKSD 709
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+ +G + +G+ G + ++P V+ L +I + A G + L +G V+ +
Sbjct: 710 GTVWTWGFNYYGQLGGGATTNR--STPVQVKGLADIIAI--AGGYVHSIALKSDGTVWAW 765
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ +LG + + + P + G + ++ IA GY + +AL + V++ G
Sbjct: 766 GYNGYGQLGDGSTTDHLTPVQVSGLTD---IIAIAGGYIHTIALKSDGT---VWAWGHNE 819
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GG+LG G+ T+ P Q+ L V+ V A +H + DG V TWG YG LG
Sbjct: 820 GGQLGDGTTTNSSTP-----VQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLG 874
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G+ S+P V L DV AI A G Y T + DG V+++G + LG+
Sbjct: 875 DGSTTERSLPVQVIGLTDVIAI--AGGYYHTIALKSDGAVWAWGYNGNNQLGN 925
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 174/424 (41%), Gaps = 45/424 (10%)
Query: 110 FKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSF 169
P T + Q GG + G +Q AG H++ + G V+++
Sbjct: 564 LTPWTTYYCRIASQNIGG--------IYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAY 615
Query: 170 GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 229
G+N + QLG G+T + P + L I A G T+ + G V+ +G ++ G+
Sbjct: 616 GANWNSQLGDGSTTDSSTPVQVSGLT--DAIAIAGGVYHTIALKSDGTVWTWGWNNSGQL 673
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 289
G + ++P V L ++ + A G++ T L +G V+T+ + +LG
Sbjct: 674 GDGTTINR--STPVQVIGLTDVIAI--AGGDYHTIALKSDGTVWTWGFNYYGQLGGGATT 729
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
N P + G + ++ IA GY + +AL + V++ G G+LG GS TD
Sbjct: 730 NRSTPVQVKGLAD---IIAIAGGYVHSIALKSDGT---VWAWGYNGYGQLGDGSTTDHLT 783
Query: 350 PRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
P Q+ L ++ AG + H + DG V WG G LG G S P V
Sbjct: 784 P-----VQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVS 838
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L DV A+ Y T + DG V+++G LG DG + P V
Sbjct: 839 GLTDVIAVTARL--YHTIALKSDGTVWTWGRNIYGQLG-----DGSTTERS---LPVQVI 888
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 528
L V I++ Y HT AL G ++A+G QLG N + R
Sbjct: 889 GLTDV------IAIAGGYY---HTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLR 939
Query: 529 VDID 532
D++
Sbjct: 940 YDMN 943
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 150 AIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIAG H+IA+ S G V+++G N G+LG G+T P + L +I A G
Sbjct: 247 AIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLS--DVIAIAGGNAH 304
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ + G V+A+G + G+ G T ++P V L ++ + A G T VL
Sbjct: 305 TIALKSDGTVWAWGDNEGGQ--LGDGSTTNRSTPVKVSGLADVIAI--AGGYSHTIVLRS 360
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V+T+ +LG + N P + G + V+ IA G + +A+ + +
Sbjct: 361 DGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIAVKSDGT---M 414
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 387
++ G G+LG G+ + P Q+ L V+ +A G +H + DG V TWG+
Sbjct: 415 WAWGYNWYGQLGDGTTINSSTP-----VQVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGF 469
Query: 388 GRYGCLGHGNEECESVP--KVVQALNDVKAIHVATGDYTTFVVSE 430
YG LG G+ S P + + + V V TG T +S
Sbjct: 470 NYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSS 514
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 166/425 (39%), Gaps = 92/425 (21%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+IA+ S G V+++G N GQLG G+T E R P++ + +I A G T+ +
Sbjct: 852 HTIALKSDGTVWTWGRNIYGQLGDGSTTE--RSLPVQVIGLTDVIAIAGGYYHTIALKSD 909
Query: 216 GQVYAFGKDSFGEAEYGVQGTK--------------LVTSPQLVE------SLKNIFVVQ 255
G V+A+G + G + G TK VT+P ++ SL ++ +
Sbjct: 910 GAVWAWGYN--GNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNG 967
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP------NDVEPHPLLGTL-------- 301
GN R F +G + + T + LG+L
Sbjct: 968 WVDGN-------RAATTAWFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYY 1020
Query: 302 --------------ENI--PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E I P QI+AG + L L +P G V++ G G+LG G+
Sbjct: 1021 RIAAQNSRGISYGSETIFLPRSQISAGAYHTLTL--KPDGT-VWACGANWNGQLGDGTTI 1077
Query: 346 DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
+ P Q+ L V+ +A G +H + D V WG YG LG G S+P
Sbjct: 1078 NRSTP-----VQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIP 1132
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V L ++ AI A G T + DG V+++G LG + NR V
Sbjct: 1133 TPVTYLTNIIAI--AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTT----NRSTPVQVS 1186
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
L + E V HT AL G ++A+G GQLG + T R
Sbjct: 1187 GLTDVIAIAGEYV-------------HTVALKSDGTVWAWGYNGYGQLGD---GSTTNRS 1230
Query: 525 NPERV 529
P +V
Sbjct: 1231 TPVQV 1235
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
IP QI+AG + L L +P G AV++ G G+LG S T+ P Q+ L
Sbjct: 143 IPRSQISAGAYHTLTL--KPDG-AVWTWGANWNGQLGDESTTNRSTP-----VQVSGLTD 194
Query: 364 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
V+ +A GA+H + DG V WG G LG G+ S P V L DV AI A G
Sbjct: 195 VIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIAI--AGGY 252
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T + DG V+++G E LG + NR P V L V I++
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTT----NRSI----PVKVGGLSDV------IAI 298
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
NAHT AL G ++A+G + GQLG + T R P +V
Sbjct: 299 AGG---NAHTIALKSDGTVWAWGDNEGGQLGD---GSTTNRSTPVKV 339
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 160/340 (47%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G+ L + G+V+ +G++ G +G + P+LVES
Sbjct: 252 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVES 309
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V A G F T V++ G +Y WG N LGH T + P + G LE
Sbjct: 310 LAVSNVEYIACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 367
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + A S +++ G G G LGHG R +P+ +E L +
Sbjct: 368 LQVLSVACGSWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRA 422
Query: 364 VVVAAGAWHAAVV----GQ------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ VA G WH+A + GQ ++ TWG G LGHG++E + VP VQAL D
Sbjct: 423 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDH 482
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T ++ G V++ G + LG N ADG+ P +V K
Sbjct: 483 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLG 532
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
NE V +IS ++ H ALT ++Y +G G G+LG
Sbjct: 533 NELVEEISCGSN-----HVAALTSRSEVYTWGMGANGRLG 567
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 23/296 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ VT+ G +Y +G S +G LGHGT W P+ + L+G++++
Sbjct: 314 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 373
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G+ + L +G+++ FG +FG +G + + V P+ VE+L ++ A G +
Sbjct: 374 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 431
Query: 263 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+A + + +++T+ G+ RLGH + + P + L + Q+A G
Sbjct: 432 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 490
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ +ALA + V+++G G+LG+ + D K P ++ Q +L N ++ G+ H
Sbjct: 491 HSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 545
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
A + V TWG G G LGHG+ E + P +V AL D ++ G ++TT +
Sbjct: 546 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 601
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 153/322 (47%), Gaps = 43/322 (13%)
Query: 212 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
I G VY +G+ S G + Y T + P+ +ES + V Q A G+ +
Sbjct: 217 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 275
Query: 266 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+R+G V+T WG + RLGH T+ + P L+ +L V IA G + +
Sbjct: 276 TTRQGEVFT--WGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEFHTCVVTASG 332
Query: 324 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+Y G G G LGHG+ P+ + L LQ + VA G+WH+A+ G+
Sbjct: 333 D---LYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 388
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 431
+ T+G G +G LGHG+ E + PK V+AL+ +A+ VA G + + + E
Sbjct: 389 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 448
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
++++G G+ LGH G++ A L P V +L V+ Q++ +S+
Sbjct: 449 RKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQAL--VDHNFHQVACGHSM----- 493
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T AL SG ++ G+ + GQLG
Sbjct: 494 TVALATSGHVFTMGSSNNGQLG 515
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 181/371 (48%), Gaps = 39/371 (10%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAG 207
A+ P H K ++ +GS G+LG G E+E PR + + I Q A G
Sbjct: 17 AVEYPLHK-----KKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T++I+ G++Y+ G + +G+ + +L QL+ L +AA G + T ++
Sbjct: 72 YTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAACGAYHTLAIN 127
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPS 324
G++ FSWG++ +LG +++ N +E P ++ TL VVQIA G + AL +
Sbjct: 128 EWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMKHAFALT---N 181
Query: 325 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+YS G G+LG G+ T E P+ I F + + +A G +H+ + + G V
Sbjct: 182 NGELYSWGSNSEGQLGLGTDTKYEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAVF 239
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG +G LG + + ++P +Q L + K + A G+ + ++ DG V++ G G
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 502
LGH + ++N + P+ V L + V QIS HT AL S G++Y
Sbjct: 300 QLGHGS--------NSNEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSRGRVY 344
Query: 503 AFGAGDKGQLG 513
A+G G GQLG
Sbjct: 345 AWGLGGAGQLG 355
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 159/325 (48%), Gaps = 21/325 (6%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G +++ +T G +YS G+N GQLGH + R + I L +AA G
Sbjct: 62 EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKAACG 119
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 264
A T+ I++ GQ++++G ++ E + G+ + +SP++V++L VVQ A G
Sbjct: 120 AYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ G +Y++ ++ +LG T+ +++P + IP+ IA G + ++A
Sbjct: 178 ALTNNGELYSWGSNSEGQLGLGTDTKYEIKP-KFISAFIGIPIAFIACGGYH--SIAISK 234
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
SG AV+ G G+LG D P ++ Q N + A G + + DG V
Sbjct: 235 SG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTVDGGVF 291
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 442
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 292 TCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Query: 443 ASLGHNAIADGQGNRHANVLTPQLV 467
LG+++ +V TPQ+V
Sbjct: 352 GQLGNHST--------RSVTTPQVV 368
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HSIA++ G V+ +G N+ GQLG T++ P +++LQ +I AA G ++ +
Sbjct: 225 GGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFL 284
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ V L V Q + G T A++ GR
Sbjct: 285 TVDGGVFTCGAGMYGQLGHGSNSNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGR 342
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG+H+ + P + G
Sbjct: 343 VYAWGLGGAGQLGNHSTRSVTTPQVVHG 370
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++ G + G+LG G DE PR ++ + +Q + A G + V+ Q G + +
Sbjct: 28 MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI--ACGENYTVVITQIGEIYSC 85
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH E+ +++ L+ A G Y T ++E G ++S+G L
Sbjct: 86 GNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G N+ ++ +P++V +L VVQI+ H FALT +G+LY++G
Sbjct: 144 GLNS-------KNFMESSPRMVKTLG--TSVVVQIACGMK-----HAFALTNNGELYSWG 189
Query: 506 AGDKGQLGI 514
+ +GQLG+
Sbjct: 190 SNSEGQLGL 198
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
+ QIA G Y + + +YS G G+LGH K +LI +
Sbjct: 63 IQQIACGENYTVVIT---QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKA- 116
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYT 424
A GA+H + + G++ +WG G LG ++ ES P++V+ L + +A G
Sbjct: 117 -ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKH 175
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
F ++ +G++YS+G LG G + P+ +++ + I +
Sbjct: 176 AFALTNNGELYSWGSNSEGQLG-------LGTDTKYEIKPKFISAF-------IGIPIAF 221
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
H+ A+++SG ++ +G GQLG+ N+ +R P
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGL---NDTQDRNLP 260
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 385 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG +G LG G E E++ P+ + + +A G+ T V+++ G++YS G +
Sbjct: 31 WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH +G + QL+ L + HT A+ E G+L+
Sbjct: 91 GQLGHE-----KGRKRL-----QLIPGLDA-------FVFKKAACGAYHTLAINEWGQLF 133
Query: 503 AFGAGDKGQLGIELVN 518
++G+ +GQLG+ N
Sbjct: 134 SWGSNTEGQLGLNSKN 149
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 169/358 (47%), Gaps = 35/358 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+S+A+ + G V++ GSNS+GQLG+GTT PRP+ L R + AAG + +
Sbjct: 131 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVAAGGSHALALCAD 188
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + +G + G T +P V L+ + V A G + L +G V+ +
Sbjct: 189 GTVWAWGNNGYG--QLGNGSTAHRATPVQVPGLQGVVAV--AGGYMHSLALCADGTVWAW 244
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ + +LG+ T + P P+ G + VV +AAG + LAL + V++ G
Sbjct: 245 GFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVAAGGFHSLALCADGT---VWAWGNNG 298
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG T P +E + + V VA G +H+ V G + +WG G LG+
Sbjct: 299 FGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGN 354
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + P VQ L V + VA G + V DG V+++G E LGH
Sbjct: 355 GSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQADGTVWAWGRNEEGQLGH-------- 404
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
R TP V L+ ++++ Y H+ ++ G L+A+G D GQLG
Sbjct: 405 ERAPERATPVRVPGLQG------EVAVAAGFY---HSLSVQAGGSLWAWGLNDFGQLG 453
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ + G V+++G N GQLG+GTT P P+ L +++ AAG ++ +
Sbjct: 231 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCAD 288
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + FG+ V + T P VE L+ + V G F+ ++ R G +
Sbjct: 289 GTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV---AGGFYHSLAVRAGGSL-W 342
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWGN+ +LG+ + + P P+ G V +AAG + ++A Q G V++ G
Sbjct: 343 SWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH--SVAVQADGT-VWAWGR 396
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LGH E+ P ++ LQ V VAAG +H+ V G + WG +G
Sbjct: 397 NEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 451
Query: 393 LGHGNEECESVP 404
LG VP
Sbjct: 452 LGDSEAPLMPVP 463
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 42/337 (12%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
+G+R + A G ++ + G V+A G +S G+ G T ++P+ V L V
Sbjct: 120 RGVRAV--AGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPRPVPGLSRAVAV 175
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
A G L +G V+ +WGN+ +LG+ + + P + G L+ VV +A G
Sbjct: 176 --AAGGSHALALCADGTVW--AWGNNGYGQLGNGSTAHRATPVQVPG-LQG--VVAVAGG 228
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
Y + LAL + V++ G G+LG+G+ P + Q V VAAG +H
Sbjct: 229 YMHSLALCADGT---VWAWGFNDYGQLGNGTTVHSPTPVPVPGLS----QVVSVAAGGFH 281
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ + DG V WG +G LG + P V+ L +V + VA G Y + V G
Sbjct: 282 SLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV--VAVAGGFYHSLAVRAGG 339
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++S+G S LG+ + + R A V VTS+ H+
Sbjct: 340 SLWSWGNNYSGQLGNGSFSSSA--RPAPVQGLGAVTSVAAGGM---------------HS 382
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
A+ G ++A+G ++GQLG E ER P RV
Sbjct: 383 VAVQADGTVWAWGRNEEGQLGHE---RAPERATPVRV 416
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A GY Y LAL + V++ G G+LG+G+ PR + + V
Sbjct: 122 VRAVAGGYQYSLALHADGT---VWACGSNSAGQLGNGTTAARSAPRPVPGLS----RAVA 174
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
VAAG HA + DG V WG YG LG+G+ + P V L V + VA G +
Sbjct: 175 VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHS 232
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ DG V+++G + LG+ + TP V L QV +S+
Sbjct: 233 LALCADGTVWAWGFNDYGQLGNGTTV--------HSPTPVPVPGLSQV------VSVAAG 278
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ H+ AL G ++A+G GQLG E V+ T+R P RV+
Sbjct: 279 GF---HSLALCADGTVWAWGNNGFGQLG-EAVS--TQRTKPGRVE 317
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV + G ++S+G+N SGQLG+G+ RP P++ L + + AAG ++ +
Sbjct: 331 HSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSV--AAGGMHSVAVQAD 388
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G++ E + G + +P V L+ V A F LS + +
Sbjct: 389 GTVWAWGRNE--EGQLGHERAPERATPVRVPGLQGEVAVAAG----FYHSLSVQAGGSLW 442
Query: 276 SWG-ND-ARLGHHTEPNDVEPHP 296
+WG ND +LG P P P
Sbjct: 443 AWGLNDFGQLGDSEAPLMPVPAP 465
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 134 RFLLAGEACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
R AG + RR A++ G GH AVT G+VY++G GQLGHG ++ P+P+
Sbjct: 261 RVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP 320
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-- 250
++G + +AG T+ ++ G ++ +G G+ + +L+ P LV +
Sbjct: 321 RIKG-EVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLI--PTLVAAFIEWG 377
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
+ V A G T VL+R G+V++F G+ RLGH + + P L LE+ V IA
Sbjct: 378 MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSP-TFLSALESERCVSIA 436
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
AG+ + +AL Q +Y+ GCG G+LGHGS +DE PR + ++ + VAAG
Sbjct: 437 AGFAHSVALTDQGQ---IYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGE 493
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGN 397
H + +G + T G +G + G+
Sbjct: 494 AHTCIFRSEGSLITLGRVSHGRMAEGS 520
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L+ + + G A ++ G VYT+ G +LGH + + + P P+ V
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE--VK 327
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
++AG+ + +A+ A+++ G G GKLGH P L+ F +
Sbjct: 328 SVSAGFYHTVAVTHHG---ALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQ 384
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
AG H V+ + G+V ++G G G LGHGN+ + P + AL + + +A G +
Sbjct: 385 AGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVA 444
Query: 428 VSEDGDVYSFGCGESASLGHNAIAD 452
+++ G +Y++GCG+ LGH + +D
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSD 469
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 25/209 (11%)
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
+ AG+C A +G+ VY+ G G G+LGHG D+ P+ + + + + V
Sbjct: 278 LSFGAGHC----AAVTDTGL-VYTWGQGRYGQLGHGDDVDKIIPQPVPR---IKGEVKSV 329
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYT 424
+AG +H V G + TWG G+ G LGH + +P +V A + + G
Sbjct: 330 SAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSH 389
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T V++ G V+SFG G+S LGH G N + +P +++L+ +ER V I+
Sbjct: 390 TLVLNRRGQVFSFGSGDSGRLGH-----GNDN---DQWSPTFLSALE--SERCVSIAAGF 439
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLG 513
AH+ ALT+ G++Y +G G G+LG
Sbjct: 440 -----AHSVALTDQGQIYTWGCGKLGRLG 463
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 19/164 (11%)
Query: 361 LQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAI 416
L+ VV +A GA H A V G V TWG GRYG LGHG++ + +P+ V + +VK+
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKS- 328
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
V+ G Y T V+ G ++++G G+ LGHN +A L P LV + +
Sbjct: 329 -VSAGFYHTVAVTHHGALFTWGDGKEGKLGHN--------DNAQRLIPTLVAAFIEWGMP 379
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
V S HT L G++++FG+GD G+LG N+Q
Sbjct: 380 VAAAQAGGS-----HTLVLNRRGQVFSFGSGDSGRLGHGNDNDQ 418
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G + G+ G+ GT+ T P+ ++SL ++ +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGFAADGQL--GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG + L+ +L IP QIAAG + AL SG AV+
Sbjct: 158 V--FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL--SG-AVF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Query: 449 AIAD 452
+ ++
Sbjct: 331 STSN 334
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 169/357 (47%), Gaps = 30/357 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR + G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + + D +LG
Sbjct: 64 GQLGH----EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLP 119
Query: 287 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
TE P + +L ++ +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYTRVPRNI-KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDL 175
Query: 346 DEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P+LI+ LL + +AAG H+ + G V WG ++G LG +E VP
Sbjct: 176 KKQTSPQLIKS--LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVP 233
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
++++L K ++++ G+ T ++++G V++FG G LGHN+ R L
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMG 293
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 520
+VT QI+ HT A S G++Y+FG G GQLG+ +N+
Sbjct: 294 NIVT----------QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 136/260 (52%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++ + KG VY++G + GQLG TEE R PR I+SL ++I+Q A G ++
Sbjct: 92 GEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G K TSPQL++SL I Q A G + L+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGYD-LKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + E + P+ LL +L + +V I+ G + AL + V+
Sbjct: 211 V--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYISCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGMGSTSNRKSPFPVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G V+ +G++ FG+ + + V P L++SL++ +V + G TA L+
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + NI V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSP 338
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS A+T G V+ +G N GQLG + + P ++SL+ +I+ + G
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ + G ++ +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVFELMGNIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
GR+Y+F G + +LG + N P P+ G
Sbjct: 312 STGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + RP + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQVYA+G + G+ G+ GT+ T P+ ++SL ++ +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGFAADGQL--GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSE 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG + L+ +L IP QIAAG + AL SG AV+
Sbjct: 158 V--FSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL--SG-AVF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + V ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Query: 449 AIAD 452
+ ++
Sbjct: 331 STSN 334
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 30/357 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR + G T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+VY + + D +LG
Sbjct: 64 GQLGH----EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLP 119
Query: 287 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SR 344
TE P + +L ++ +VQ+A GY + LAL+ G V+S G G+LG G
Sbjct: 120 GTEEYTRVPRNI-KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDL 175
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
+ P+LI+ LL + +AAG H+ + G V WG ++G LG +E VP
Sbjct: 176 KKQTSPQLIKS--LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVP 233
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
++++L K ++++ G+ T ++++G V++FG G LGHN+ R L
Sbjct: 234 NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMG 293
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 520
+VT QI+ HT A S G++Y+FG G GQLG+ +N+
Sbjct: 294 NIVT----------QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 136/260 (52%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++ + KG VY++G + GQLG TEE R PR I+SL ++I+Q A G ++
Sbjct: 92 GEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ G+ G K TSPQL++SL I Q A G + L+ G
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGYD-LKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG + E + P+ LL +L + +V I+ G + AL + V+
Sbjct: 211 V--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYISCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S E +PR + F+L+ +A G H +A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGMGSTSNRKSPFPVK 342
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI Q AAG
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G V+ +G++ FG+ + + V P L++SL++ +V + G TA L+
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYISCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + NI V QIA G + A PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFV--PSTGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 316 IYSFGLGGNGQLGMGSTSNRKSP 338
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS A+T G V+ +G N GQLG + + P ++SL+ +I+ + G
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ + G ++ +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVFELMGNIVTQIACGRQHTSAFVP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
GR+Y+F G + +LG + N P P+ G
Sbjct: 312 STGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 169/358 (47%), Gaps = 35/358 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+S+A+ + G V++ GSNS+GQLG+GTT PRP+ L R + AAG + +
Sbjct: 134 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVAAGGSHALALCAD 191
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + +G + G T +P V L+ + V A G + L +G V+ +
Sbjct: 192 GTVWAWGNNGYG--QLGNGSTAHRATPVQVPGLQGVVAV--AGGYMHSLALCADGTVWAW 247
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ + +LG+ T + P P+ G + VV +AAG + LAL + V++ G
Sbjct: 248 GFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVAAGGFHSLALCADGT---VWAWGNNG 301
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG T P +E + + V VA G +H+ V G + +WG G LG+
Sbjct: 302 FGQLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGN 357
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + P VQ L V + VA G + V DG V+++G E LGH
Sbjct: 358 GSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQADGTVWAWGRNEEGQLGH-------- 407
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
R TP V L+ ++++ Y H+ ++ G L+A+G D GQLG
Sbjct: 408 ERAPERATPVRVPGLQG------EVAVAAGFY---HSLSVQAGGSLWAWGLNDFGQLG 456
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ + G V+++G N GQLG+GTT P P+ L +++ AAG ++ +
Sbjct: 234 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCAD 291
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + FG+ V + T P VE L+ + V G F+ ++ R G +
Sbjct: 292 GTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV---AGGFYHSLAVRAGGSL-W 345
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWGN+ +LG+ + + P P+ G V +AAG + ++A Q G V++ G
Sbjct: 346 SWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH--SVAVQADGT-VWAWGR 399
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LGH E+ P ++ LQ V VAAG +H+ V G + WG +G
Sbjct: 400 NEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQ 454
Query: 393 LGHGNEECESVP 404
LG VP
Sbjct: 455 LGDSEAPLMPVP 466
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 149/337 (44%), Gaps = 42/337 (12%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
+G+R + A G ++ + G V+A G +S G+ G T ++P+ V L V
Sbjct: 123 RGVRAV--AGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPRPVPGLSRAVAV 178
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
A G L +G V+ +WGN+ +LG+ + + P + G L+ VV +A G
Sbjct: 179 --AAGGSHALALCADGTVW--AWGNNGYGQLGNGSTAHRATPVQVPG-LQG--VVAVAGG 231
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
Y + LAL + V++ G G+LG+G+ P + Q V VAAG +H
Sbjct: 232 YMHSLALCADGT---VWAWGFNDYGQLGNGTTVHSPTPVPVPGLS----QVVSVAAGGFH 284
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ + DG V WG +G LG + P V+ L +V + VA G Y + V G
Sbjct: 285 SLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV--VAVAGGFYHSLAVRAGG 342
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++S+G S LG+ + + R A V VTS+ H+
Sbjct: 343 SLWSWGNNYSGQLGNGSFSSSA--RPAPVQGLGAVTSVAAGGM---------------HS 385
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
A+ G ++A+G ++GQLG E ER P RV
Sbjct: 386 VAVQADGTVWAWGRNEEGQLGHE---RAPERATPVRV 419
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A GY Y LAL + V++ G G+LG+G+ PR + + V
Sbjct: 125 VRAVAGGYQYSLALHADGT---VWACGSNSAGQLGNGTTAARSAPRPVPGLS----RAVA 177
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
VAAG HA + DG V WG YG LG+G+ + P V L V + VA G +
Sbjct: 178 VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHS 235
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ DG V+++G + LG+ + TP V L QV +S+
Sbjct: 236 LALCADGTVWAWGFNDYGQLGNGTTV--------HSPTPVPVPGLSQV------VSVAAG 281
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ H+ AL G ++A+G GQLG E V+ T+R P RV+
Sbjct: 282 GF---HSLALCADGTVWAWGNNGFGQLG-EAVS--TQRTKPGRVE 320
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV + G ++S+G+N SGQLG+G+ RP P++ L + + AAG ++ +
Sbjct: 334 HSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSV--AAGGMHSVAVQAD 391
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G++ E + G + +P V L+ V A F LS + +
Sbjct: 392 GTVWAWGRNE--EGQLGHERAPERATPVRVPGLQGEVAVAAG----FYHSLSVQAGGSLW 445
Query: 276 SWG-ND-ARLGHHTEPNDVEPHP 296
+WG ND +LG P P P
Sbjct: 446 AWGLNDFGQLGDSEAPLMPVPAP 468
>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
castellanii str. Neff]
Length = 395
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 142/299 (47%), Gaps = 35/299 (11%)
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
+ +L+ VV + G + VL+ EGRV++F G RLGH E EP +
Sbjct: 31 IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTA 90
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----------- 353
V +I+AG + LAL G A YS G G+ G+LGHG TD+ PR I
Sbjct: 91 GVAKISAGTTHSLALT--KDGKA-YSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPV 147
Query: 354 -EQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
++ + PV+ VAAG +H+ ++ DGRV ++G G G LGHG+ + P +++AL
Sbjct: 148 GDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEAL 207
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
D + + +A G T V+ ++G V+ FG S +GQ VL P +
Sbjct: 208 ADRRIVSMACGSANTLVLDDEGRVFFFGLDYSE---FPKFTEGQAR---FVLLPSALGLA 261
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+++ E H LT GKL AFG G G+LG+ ++T R P V
Sbjct: 262 EEITEVRA---------GEGHCLLLTREGKLLAFGLGKNGRLGL---GDETNRLAPTAV 308
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 44/373 (11%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
+GVV S G G LG G + PIR+L+ R++ +AG ++++++ G+V++F
Sbjct: 2 RGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSF 61
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGND 280
G G +G + T P+ + V + + G + L+++G+ Y+F +G
Sbjct: 62 GNGLHGRLGHGNEETCF--EPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMF 119
Query: 281 ARLGHHTEPNDVEPH----------PLLGTL----ENIPVVQ-IAAGYCYLLALACQPSG 325
RLGH E + + P P +G E PV++ +AAGY + L L
Sbjct: 120 GRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR- 178
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
VYS G G+ G LGHG R P +IE L + + V +A G+ + V+ +GRV +
Sbjct: 179 --VYSFGAGVMGALGHGDRDKRLRPTMIE--ALADRRIVSMACGSANTLVLDDEGRVFFF 234
Query: 386 G--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
G + + G +P + ++ + G +++ +G + +FG G++
Sbjct: 235 GLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGH--CLLLTREGKLLAFGLGKNG 292
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT----ESG 499
LG + D N L P VT V+I + H AL E
Sbjct: 293 RLG---LGD-----ETNRLAPTAVT-FPSNGTTSVEIDIA---CGAKHGLALVDVPGEGP 340
Query: 500 KLYAFGAGDKGQL 512
+LYAFG+GD+GQL
Sbjct: 341 RLYAFGSGDQGQL 353
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 21/238 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ +T+ G VYSFG+ G LGHG ++ RP I +L RI+ A G+ T++
Sbjct: 165 AGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLV 224
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ D G+V+ FG D ++ + V P + + I V+A G+ +L+REG+
Sbjct: 225 LDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCL--LLTREGK 282
Query: 272 VYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQIAAGYCYLLALACQP-SGM 326
+ F G + RLG E N + P P GT + IA G + LAL P G
Sbjct: 283 LLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTS--VEIDIACGAKHGLALVDVPGEGP 340
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPR--------LIEQFQLLNLQPVVVAAGAWHAAVV 376
+Y+ G G G+L +G R D P L+ Q ++ P ++AG H+ V+
Sbjct: 341 RLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQ----HIVPAAISAGKAHSLVL 394
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 32/318 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 210
AG HS+ +T +G V+SFG+ G+LGHG E + PR I + + +AG ++
Sbjct: 44 AGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSL 103
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLV----------TSP----QLVESLKNIFVVQA 256
++ G+ Y+FG FG +G + +L+ SP ++ E+ + +
Sbjct: 104 ALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHV 163
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
A G F + +L+ +GRVY+F G LGH + P ++ L + +V +A G
Sbjct: 164 AAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRP-TMIEALADRRIVSMACGSANT 222
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAA 374
L L G + G + E R + L L + V AG H
Sbjct: 223 LVL--DDEGRVFF-----FGLDYSEFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCL 275
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA---IHVATGDYTTF----V 427
++ ++G++ +G G+ G LG G+E P V ++ I +A G V
Sbjct: 276 LLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDV 335
Query: 428 VSEDGDVYSFGCGESASL 445
E +Y+FG G+ L
Sbjct: 336 PGEGPRLYAFGSGDQGQL 353
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 176/370 (47%), Gaps = 27/370 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HSIA+ GVV S+G GQLGHG ++ P I +L + GA T+ +
Sbjct: 18 GSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAV 77
Query: 213 -SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EG 270
S GQ+Y++G FG +G G V P+ + V + A G+ T V+++ +G
Sbjct: 78 ASSRGQIYSWGWGDFGRLGHGECGDVFV--PRPIAFFSGRPVARVACGDTHTLVVTQGDG 135
Query: 271 RVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+YTF + +LG HT ND L+ L+ V +A G + +LA +G V+
Sbjct: 136 ALYTFGRNQNGQLGLGHT--NDCLSPQLVTALQGERVSSVACGSEH--SLAATEAGT-VF 190
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G G LG G D P + + + VV G H+AVV +GRV T+GW +
Sbjct: 191 SWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVC--GWRHSAVVTDEGRVFTFGWSK 248
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LGHG+ + P +V L + VA G T +G++Y++G + LG
Sbjct: 249 YGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLG--- 305
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN------SIYWNAHTFALTESGKLYA 503
+ D + +R A P V V + T + W HT A+TE+G++Y+
Sbjct: 306 LGDSE-DRAA----PTPVAGFGLAGGGVEAGAATPRRVALLACGWR-HTVAVTEAGEVYS 359
Query: 504 FGAGDKGQLG 513
+G G GQLG
Sbjct: 360 WGRGVNGQLG 369
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 148/317 (46%), Gaps = 24/317 (7%)
Query: 151 IAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G +++AV +S+G +YS+G G+LGHG + + PRPI G + + A G T
Sbjct: 68 VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHT 127
Query: 210 MLISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++++ G +Y FG++ G+ G+ T SPQLV +L+ V A G+ + +
Sbjct: 128 LVVTQGDGALYTFGRNQNGQ--LGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE 185
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G V+++ WG LG + P ++G L+ + V + G+ + + + V
Sbjct: 186 AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVTDEGR---V 241
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
++ G G+LGHG D P L+ Q + V AG W H +G + WGW
Sbjct: 242 FTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTV---AGGWRHTMAADSEGNLYAWGW 298
Query: 388 GRYGCLGHGNEECESVPKVVQALNDV------------KAIHVATGDYTTFVVSEDGDVY 435
++G LG G+ E + P V + +A G T V+E G+VY
Sbjct: 299 NKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVY 358
Query: 436 SFGCGESASLGHNAIAD 452
S+G G + LGH A D
Sbjct: 359 SWGRGVNGQLGHGAEQD 375
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 26/333 (7%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R++ + G+ ++ + D G V ++G+ G+ +G TSP + +L + V
Sbjct: 11 RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDAVV 68
Query: 258 IGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G +T AV S G++Y++ WG+ RLGH + P P+ PV ++A G +
Sbjct: 69 CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIA-FFSGRPVARVACGDTHT 127
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
L + Q G A+Y+ G G+LG G D P+L+ Q + V A G+ H+
Sbjct: 128 LVVT-QGDG-ALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSV--ACGSEHSLAA 183
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G V +WGWGRYG LG G+ + P V L+ V V G + VV+++G V++
Sbjct: 184 TEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFT 243
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
FG + LGH H + P LV L+ V W HT A
Sbjct: 244 FGWSKYGQLGH--------GDHVDHTRPCLVAGLQHCRVSTVAGG------WR-HTMAAD 288
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G LYA+G GQLG+ + +R P V
Sbjct: 289 SEGNLYAWGWNKFGQLGL---GDSEDRAAPTPV 318
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 17/266 (6%)
Query: 145 RENSQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
R ++ G H++ VT G +Y+FG N +GQLG G T + P+ + +LQG R+ A
Sbjct: 115 RPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G+ ++ ++AG V+++G +G G + +P V L + V G +
Sbjct: 175 CGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRY--TPTRVVGLDGVTVTSVVCGWRHS 232
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
AV++ EGRV+TF W +LGH + P L+ L++ V +A G+ + +A +
Sbjct: 233 AVVTDEGRVFTFGWSKYGQLGHGDHVDHTRP-CLVAGLQHCRVSTVAGGWRHTMAADSEG 291
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----------QPVVVAAGAWHA 373
+ +Y+ G G+LG G D P + F L + ++A G H
Sbjct: 292 N---LYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHT 348
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEE 399
V + G V +WG G G LGHG E+
Sbjct: 349 VAVTEAGEVYSWGRGVNGQLGHGAEQ 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G HS+A T G V+S+G G LG G +++ + P + L G+ + G
Sbjct: 171 SSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWR 230
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++D G+V+ FG +G+ +G T P LV L++ V A G T
Sbjct: 231 HSAVVTDEGRVFTFGWSKYGQLGHGDHVDH--TRPCLVAGLQHCRVSTVAGGWRHTMAAD 288
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG---------TLENIP--VVQIAAGYCYL 316
EG +Y + W +LG + P P+ G P V +A G+ +
Sbjct: 289 SEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHT 348
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+A+ VYS G G+ G+LGHG+ D
Sbjct: 349 VAVT---EAGEVYSWGRGVNGQLGHGAEQD 375
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 148/282 (52%), Gaps = 37/282 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P + L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488
Query: 299 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L + +V+IAA G+ Y LALA VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 356 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 414 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
K I VA +GD V+++G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 41/331 (12%)
Query: 190 PIRS--LQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 245
PI+S L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 300
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ V +G V +G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 606 VIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + +++DG VYS+G G++ LGH +V P+L+ +L+ ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEALQ--GKKVIDV 715
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ ++ H ALTE +++++G D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGNNDQCQ 741
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 26/325 (8%)
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
+L + ++Q A G+ ++ G+VYA G+ + G G+ + V P+ V +L +
Sbjct: 2692 TLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMS-SGTVPIPRQVTALSSYV 2750
Query: 253 VVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
V + A+ G L+ +G+V+++ G+D +LGH + N +P L+ L+ + IA
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIA 2809
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G + AL S +Y+ G G G+LGHG T + P++++ LL + + VA G+
Sbjct: 2810 CGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGS 2864
Query: 371 WHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + +G V +WG G +G LG G E +VP+ ++ LN + G + +
Sbjct: 2865 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2924
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
++ G V+++G G+ LGH + +V PQ+V L+ +++V +++
Sbjct: 2925 TKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVGA---- 2970
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
H A+T++G++YA+G D GQ G
Sbjct: 2971 -LHCLAVTDAGQVYAWGDNDHGQQG 2994
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 160/359 (44%), Gaps = 31/359 (8%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+++ G +Y +G N GQLG + P P +L +R +Q G ++ G
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3683
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 274
++YA G + GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3684 KLYATGYGA--GGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYS 3741
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ D +LGH P ++ +L VV IAAG + AC S +Y+ G G
Sbjct: 3742 WGEAEDGKLGHGNRSPCDRPR-VVESLRGTEVVDIAAGGAHS---ACVTSAGDLYTWGKG 3797
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LGH D+ P+L+E Q + V +G + D V +WG G YG LG
Sbjct: 3798 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3857
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + VP V V + V GD + G G
Sbjct: 3858 RGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSD------------ 3905
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P+ V L+ ++V+ I+ T S+ H TE G++Y +G D+GQLG
Sbjct: 3906 ----DHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEEGEVYTWGDNDEGQLG 3953
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 165/355 (46%), Gaps = 24/355 (6%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR + +L + + A
Sbjct: 2697 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAV 2756
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2757 HSGGRHATALTVD-GKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2813
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 2814 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 2872
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 2873 TDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSG 2928
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2929 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 2988
Query: 441 ESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+ QGN V P LV L+ V ++S+ W A
Sbjct: 2989 DHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMA 3034
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+T++G +Y++G + G+LGHG++E+E P + L+G+++I A G+G + +
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++D GQV+++G +G + G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTDNGQVWSWGDGDYG--KLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+VY++ G++ RLGH TE + P LL L+ V+ +AAG + LAL
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPK-LLEALQGKKVIDVAAGSTHCLAL 725
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+ P E+L + VVQ A G+ ++ EG+VY + RLG V +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
L + V ++A A A G V+S G G GKLGH SR + PRLIE +
Sbjct: 2744 TALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 2802
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
++ +A G+ H+A + G + TWG G YG LGHG+ + PK+V+ L + I V
Sbjct: 2803 KRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2860
Query: 419 ATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
A G D T ++++G V+S+G G+ LG G+ NV PQ + L +
Sbjct: 2861 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNV--PQNIERLN--GQG 2910
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V QI + ALT+SG ++ +G GD +LG
Sbjct: 2911 VCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 2942
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 165/366 (45%), Gaps = 26/366 (7%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--I 197
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+Q I
Sbjct: 3659 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFI 3718
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R + +G + +S G+VY++G+ G+ +G + P++VESL+ VV A
Sbjct: 3719 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVVESLRGTEVVDIA 3776
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +A G
Sbjct: 3777 AGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDVACGSGDAQ 3835
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L C V+S G G GKLG G K P + L + +W VG
Sbjct: 3836 TL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLS--LRVGRPSTPPPSWPRLDVG 3892
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G G Y LGHG+++ P+ VQ L K I +ATG +E+G+VY++
Sbjct: 3893 --------GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTW 3944
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + LG DG N + P+LV +L+ V +++ W+ A
Sbjct: 3945 GDNDEGQLG-----DGTTN---AIQRPRLVAALQGRKVNRVACGSAHTLAWSTSKPA--S 3994
Query: 498 SGKLYA 503
+GKL A
Sbjct: 3995 AGKLPA 4000
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 32/289 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTML 211
H +A+ + G VYS+G G+LGHG T P+ I + G + ++ A G+ +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--SRE 269
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ L +
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQPLAVTDN 624
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+V+++ G+ +LG P L+ L+++ VV++ G + +AL VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALT---KDGQVY 680
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G +LGHG+ ++P+L+E Q + + VAAG+ H + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEALQ--GKKVIDVAAGSTHCLALTEDSEVHSWG--- 735
Query: 390 YGCLGHGNEECESV---------PKVVQALNDVKAIHVATGDYTTFVVS 429
N++C+ P ++ L+ + +A G +F S
Sbjct: 736 ------NNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWS 778
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 126 GGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE 185
G S + L+AG + + +G +AVT G V+S+G G+LG G ++
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGC 646
Query: 186 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
P+ I LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLL 704
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENI 304
E+L+ V+ A G+ L+ + V+ SWGN+ + H + +P P LL L+
Sbjct: 705 EALQGKKVIDVAAGSTHCLALTEDSEVH--SWGNNDQCQHFDTLHQTKPEPSLLPGLDTK 762
Query: 305 PVVQIAAG 312
+V IA G
Sbjct: 763 HIVGIACG 770
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 2906 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2960
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I+ A GA + ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2961 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3018
Query: 257 AIGN 260
A G+
Sbjct: 3019 ACGS 3022
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 34/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS S GQLG G E+E P I + Q A G T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGS 66
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
+ + + + + P L+ L++ ++Q + G+ + LS G+V SWG++
Sbjct: 67 NDHSQLGHDLPTKR----PLLIPELQDYVIIQISCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH T+ ++ ++ L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLGV 177
Query: 342 GSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNE 398
S D H + LL + +A G H+ ++ + G V +GWGR C LG +E
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF--------S 287
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+N + P++V L + + Q++ N HT AL S G++YAFG G GQLG
Sbjct: 288 SNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYAFGLGSSGQLG 336
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 21/306 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ GSN QLGH + RP I LQ IIQ + G+
Sbjct: 44 QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTK--RPLLIPELQDYVIIQISCGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +SD GQV ++G + G+ + +++ P++V L + VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALAC 321
G +Y SWG++ +LG ++ P D+ +PL L TL IP+ IA G + +L++
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS--- 214
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 215 -KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 270
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 441 ESASLG 446
S LG
Sbjct: 331 SSGQLG 336
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L ++Q A G
Sbjct: 94 QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV K +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ G V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 212 LISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + +P+VV
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ G V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y G G+LG G DE+ P I ++ V A G H + +G+
Sbjct: 3 SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQV--ACGHRHTLFLTANGK 60
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G + LGH + P ++ L D I ++ G + +S+ G V S+G +
Sbjct: 61 VYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH + P++V L V++ VVQI+ N+ H+ ALT G+L
Sbjct: 119 CGQLGH-------ATDKEIMQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERV 529
Y++G+ GQLG+ + T P R+
Sbjct: 165 YSWGSNIYGQLGVNSPKDLTHCNYPLRL 192
>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
Length = 982
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N++ +A G H+ AVT G +Y++G++ S G +GH W P+ + S L+G+RI
Sbjct: 333 NTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSI 392
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A GA T L+S AGQ++ FG +FG +G + + + P+ VESLK + V+AA G +
Sbjct: 393 ACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKTVRAACGIWH 450
Query: 263 TAVLSR------------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
TA + G+++T+ G+ RLGH + + P + L + Q+A
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVP-TCVAALVDYNFRQVA 509
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G+ +AL SG V+++G + G+LG+ + D K P +++ +L + GA
Sbjct: 510 CGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELARTFVEEIGCGA 564
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
H A + + TWG G G LGHG+ E + P +V+AL D + VA G T V+
Sbjct: 565 HHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVI 622
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 42/361 (11%)
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G G+ + P+ +++ + + A G+ L++ G V+ +G++ G +G+
Sbjct: 261 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD- 319
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 293
V+ PQLV++L + A G+F T ++ G +YT WG DA+ +GH +
Sbjct: 320 -VSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYT--WGADAQSGGLVGHSNPVSHWM 376
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
P + LE + + IA G + ++ S +++ G G G LGHG + + P+ +
Sbjct: 377 PKRMSSPLEGVRISSIACGAWHTALVS---SAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 433
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 401
E + L+ V A G WH A V + G++ TWG G LGHG++E +
Sbjct: 434 ESLK--GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQK 491
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP V AL D VA G T ++ G V++ G LG N ADG+
Sbjct: 492 LVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG-NPKADGK------- 543
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQ 520
P +V + + + I AH AL+ ++Y +G G G+LG V ++
Sbjct: 544 -VPGMV-------DGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDR 595
Query: 521 T 521
T
Sbjct: 596 T 596
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 38/307 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 299
P+ +++ + V A G+ A+++++G V F WG + RLGH + + EP L+
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 327
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ + + GG +GH + P+ + L
Sbjct: 328 ALAGVNTELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 385
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
++ +A GAWH A+V G++ T+G G +G LGHG++ ++PK V++L +K + A
Sbjct: 386 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 445
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 446 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH-------GDKEQK-LVPTCV 497
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L N R Q++ +S+ T ALT SG+++ G+ GQLG N + + P
Sbjct: 498 AALVDYNFR--QVACGHSL-----TVALTTSGRVFTMGSTIYGQLG----NPKADGKVPG 546
Query: 528 RVDIDLS 534
VD +L+
Sbjct: 547 MVDGELA 553
>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
Length = 991
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N++ +A G H+ AVT G +Y++G++ S G +GH W P+ + S L+G+RI
Sbjct: 342 NAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSI 401
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A GA T L+S AGQ++ FG +FG +G + + + P+ VESLK + V+AA G +
Sbjct: 402 ACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKTVRAACGIWH 459
Query: 263 TAVLSR------------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
TA + G+++T+ G+ RLGH + + P + L + Q+A
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVP-TCVAALVDYNFRQVA 518
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G+ +AL SG V+++G + G+LG+ + D K P +++ +L + GA
Sbjct: 519 CGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELARTFVEEIGCGA 573
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
H A + + TWG G G LGHG+ E + P +V+AL D + VA G T V+
Sbjct: 574 HHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVI 631
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 42/361 (11%)
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G G+ + P+ +++ + + A G+ L++ G V+ +G++ G +G+
Sbjct: 270 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD- 328
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 293
V+ PQLV++L + A G+F T ++ G +YT WG DA+ +GH +
Sbjct: 329 -VSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYT--WGADAQSGGLVGHSNPVSHWM 385
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
P + LE + + IA G + ++ S +++ G G G LGHG + + P+ +
Sbjct: 386 PKRMSSPLEGVRISSIACGAWHTALVS---SAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 442
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 401
E + L+ V A G WH A V + G++ TWG G LGHG++E +
Sbjct: 443 ESLK--GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQK 500
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP V AL D VA G T ++ G V++ G LG N ADG+
Sbjct: 501 LVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG-NPKADGK------- 552
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQ 520
P +V + + + I AH AL+ ++Y +G G G+LG V ++
Sbjct: 553 -VPGMV-------DGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDR 604
Query: 521 T 521
T
Sbjct: 605 T 605
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 38/307 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 299
P+ +++ + V A G+ A+++++G V F WG + RLGH + + EP L+
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 336
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ + + GG +GH + P+ + L
Sbjct: 337 ALAGVNAELVACGDFHTCAVTLSGE-LYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 394
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
++ +A GAWH A+V G++ T+G G +G LGHG++ ++PK V++L +K + A
Sbjct: 395 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 454
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 455 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH-------GDKEQK-LVPTCV 506
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L N R Q++ +S+ T ALT SG+++ G+ GQLG N + + P
Sbjct: 507 AALVDYNFR--QVACGHSL-----TVALTTSGRVFTMGSTIYGQLG----NPKADGKVPG 555
Query: 528 RVDIDLS 534
VD +L+
Sbjct: 556 MVDGELA 562
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 19/309 (6%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
R + G HSI + G VY+ G N+ GQLGH +E +P I +L II A
Sbjct: 92 ERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH--EKEGSKPEQIGALADQHIIHVA 149
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFF 262
G ++ +SD G+++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 150 CGESHSLALSDQGRLFSWGAGSDGQL--GLTTTEDSVAVPRLIKKLNQEMILQVSCGNWH 207
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
L+ +G+ F+WG ++ +LG E P+ P + +L+ IP+ Q+AAG + AL
Sbjct: 208 CLALAADGQF--FAWGQNSHGQLGLGKEFPSQASPQR-VKSLDGIPLAQVAAGGAHSFAL 264
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 378
+ SG AV+ G G+LG D + P + +LL Q VV ++ G+ H AV+ +
Sbjct: 265 SL--SG-AVFGWGKNTSGQLGLSDEQDRESPCHV---KLLRTQKVVYISCGSDHTAVLTK 318
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSF 437
G V T+G G G LGH + E P+ V L + +A G +T V G +Y+F
Sbjct: 319 TGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378
Query: 438 GCGESASLG 446
GCG LG
Sbjct: 379 GCGIKGQLG 387
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 26/329 (7%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
PR + + + A G ++ + + G+VY G ++ G+ + +G+K P+ +
Sbjct: 83 EPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK----PEQIG 138
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+L + ++ A G + LS +GR++++ G+D +LG T + V L+ L +
Sbjct: 139 ALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI 198
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVV 365
+Q++ G + LALA ++ G G+LG G + P+ ++ + L
Sbjct: 199 LQVSCGNWHCLALAADGQ---FFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPL--AQ 253
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
VAAG H+ + G V WG G LG +E+ P V+ L K ++++ G T
Sbjct: 254 VAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHT 313
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
V+++ G V++FG G LGH++ D R L+ + V QI+
Sbjct: 314 AVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRV----------LELMGSEVSQIACGRQ 363
Query: 486 IYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
HT A SG +YAFG G KGQLG
Sbjct: 364 -----HTLAFVPSSGLIYAFGCGIKGQLG 387
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 147/312 (47%), Gaps = 35/312 (11%)
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G +G GT P ++E + F V + A G + L +G VYT
Sbjct: 63 WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH E + E +G L + ++ +A G + LAL+ Q ++S G G G+LG
Sbjct: 123 GQLGHEKEGSKPEQ---IGALADQHIIHVACGESHSLALSDQGR---LFSWGAGSDGQLG 176
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D PRLI++ LN + ++ V+ G WH + DG+ WG +G LG G E
Sbjct: 177 LTTTEDSVAVPRLIKK---LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKE 233
Query: 399 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
++ P+ V++L+ + VA G +F +S G V+ +G S LG + D +
Sbjct: 234 FPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPC 293
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
H +L Q +VV IS + HT LT++G ++ FGAG GQLG +
Sbjct: 294 HVKLLRTQ----------KVVYISCGSD-----HTAVLTKTGGVFTFGAGSCGQLGHDSF 338
Query: 518 NNQTERGNPERV 529
N++ NP RV
Sbjct: 339 NDEV---NPRRV 347
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 138/298 (46%), Gaps = 28/298 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L I+Q + G +
Sbjct: 151 GESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLA 210
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ +A+G++S G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPS-QASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 269
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG + +LG E D E + L VV I+ G + L V+
Sbjct: 270 V--FGWGKNTSGQLGLSDE-QDRESPCHVKLLRTQKVVYISCGSDHTAVLT---KTGGVF 323
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381
Query: 389 RYGCLGHG---NEEC------------ESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
G LG G N +C E V + A H+ +G TFV+ +
Sbjct: 382 IKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVLCSE 439
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N+SGQLG ++ P ++ L+ +++ + G+
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSD 311
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ G V+ FG S G+ G +P+ V L V Q A G T A +
Sbjct: 312 HTAVLTKTGGVFTFGAGSCGQL--GHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFV 369
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 370 PSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKG 402
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 381 RVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
++ WG+ +G G + + P+ +++ VA G + + EDG+VY+ G
Sbjct: 59 KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LGH + +G++ P+ + +L ++ ++ ++ S H+ AL++
Sbjct: 119 VNTKGQLGH----EKEGSK------PEQIGAL--ADQHIIHVACGES-----HSLALSDQ 161
Query: 499 GKLYAFGAGDKGQLGI 514
G+L+++GAG GQLG+
Sbjct: 162 GRLFSWGAGSDGQLGL 177
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 171/366 (46%), Gaps = 41/366 (11%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G ++S G G + T+ + P+P+ S + + Q + G L++ G+V+ +G
Sbjct: 231 GEIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWG 290
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---- 278
++S G +G++ T P+LVESL + A G + T +S G ++T WG
Sbjct: 291 EESGGRLGHGIEDH--FTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFT--WGDGSN 346
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
N LGH T+ + P + G LE + V+ IA G + ALA S +++ G G G
Sbjct: 347 NSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACG-TWHSALAT--SNGKLFTFGDGTFGA 403
Query: 339 LGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG------RVCTWGW 387
LGHG R P+ + Q LN L+ + VA G WH A V+ Q G ++ TWG
Sbjct: 404 LGHGDRKSVSSPK---ELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGD 460
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LGHGN++ +P V +L D +A G T ++ G V++ G L
Sbjct: 461 GDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQL-- 518
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
GN +N P LV + V E V +IS Y HT LT +++ +G G
Sbjct: 519 -------GNPSSNGKIPCLVQD-RLVGEFVEEISC--GAY---HTAVLTSRSEVFTWGRG 565
Query: 508 DKGQLG 513
GQLG
Sbjct: 566 ANGQLG 571
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 161/289 (55%), Gaps = 22/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ A+++ G ++++G SN+SG LGHGT W P+ + L+G++++ A G +
Sbjct: 325 GEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHS 384
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
L + G+++ FG +FG +G + K V+SP+ ++SL + ++ A G + TA V
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDR--KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEV 442
Query: 266 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+S+ G +++T+ G+ RLGH + + P + +L + Q+A G+ +AL
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLP-TCVSSLIDYNFQQLACGHTMTVAL 501
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+++G G+LG+ S ++ K P L+ Q +L+ ++ GA+H AV+
Sbjct: 502 TT--SGH-VFTMGGSAYGQLGNPS-SNGKIPCLV-QDRLVGEFVEEISCGAYHTAVLTSR 556
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E +P +V+AL + +++ G ++T+ +
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSI 605
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 175/362 (48%), Gaps = 32/362 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++ +GS G+LG G E+E + PR + + I Q A G T+ ++ GQVY+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 281
+ G+ +L QL+ + + +AA G+ T V++ G++ FSWG++
Sbjct: 61 NDHGQLGQEKGRKRL----QLISGIDPLAFRKAACGSSHTLVVNEWGQL--FSWGSNVEG 114
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG + ++ TL +VQIA G + +AL + +Y+ G G+LG
Sbjct: 115 QLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT---NNGELYAWGSNSDGQLGL 171
Query: 342 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
GS T E P+L+ + + VA G +H V+ + G V WG +G LG + +
Sbjct: 172 GSDTKMELKPKLVHSLAAVPI--AFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQN 229
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+VP ++ L + + + A G+ + ++ DG V++ G G LGH GN+ +
Sbjct: 230 RNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGH-------GNKTSE 282
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNN 519
+L Q+ ++ + V QIS HT AL S G++YA+G G GQLG + N
Sbjct: 283 ILPRQI---MELMGSTVTQISCGRR-----HTLALVPSRGRVYAWGLGGAGQLGNRIAQN 334
Query: 520 QT 521
T
Sbjct: 335 ST 336
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 160/324 (49%), Gaps = 19/324 (5%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G ++IAVT +G VYS G+N GQLG + R + I + + +AA G
Sbjct: 35 EIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRK--RLQLISGIDPLAFRKAACG 92
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
+ T+++++ GQ++++G + E + G+ + + + P++V++L +VQ A G +
Sbjct: 93 SSHTLVVNEWGQLFSWGSNV--EGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSI 150
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
L+ G +Y + +D +LG ++ L+ +L +P+ +A G + + ++ S
Sbjct: 151 ALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVIS--KS 208
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G AV++ G G+LG + P + L N + A G + + DG V T
Sbjct: 209 G-AVFAWGRNTFGQLGLSDIQNRNVPCQLR--TLRNSRVCYAACGEEFSVFLTMDGGVFT 265
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESA 443
G G YG LGHGN+ E +P+ + L ++ G +T +V G VY++G G +
Sbjct: 266 CGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAG 325
Query: 444 SLGHNAIADGQGNRHANVLTPQLV 467
LG N IA N TPQ+V
Sbjct: 326 QLG-NRIAQ-------NSTTPQVV 341
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+I ++ G V+++G N+ GQLG + P +R+L+ R+ AA G ++ +
Sbjct: 198 GGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFL 257
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G + ++++ P+ + L V Q + G T A++ GR
Sbjct: 258 TMDGGVFTCGAGMYGQLGHGNKTSEIL--PRQIMELMGSTVTQISCGRRHTLALVPSRGR 315
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG+ N P + G
Sbjct: 316 VYAWGLGGAGQLGNRIAQNSTTPQVVFG 343
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 20/311 (6%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
C E S A+AG VYS+G G+LG G ++ + P P+ +L G R+
Sbjct: 69 CGAEYSMAVAGGDKQ--------VYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASV 120
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G T++ + GQ++AFG++ G+ G+ + PQLV +L+ VV A G
Sbjct: 121 ACGDTHTLVATAEGQLFAFGRNQNGQC--GLGSIQDCLEPQLVTALQGKEVVAVACGAEH 178
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ ++ EG VY + WG +G E D L LE + V Q+ G+ + +A+
Sbjct: 179 SMCVTSEGEVYCWGWGRYGNIG-DGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAV--- 234
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGR 381
G A+Y+ G G +L G R D P+ +E +Q V AG W H GR
Sbjct: 235 DEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEA-----VQQVATVAGGWRHTMAADSQGR 289
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ GW ++G G G+ E + V+AL + + V +G T V+ G +S+G
Sbjct: 290 LFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNV 349
Query: 442 SASLGHNAIAD 452
+ LGH+ + D
Sbjct: 350 NGQLGHSGMQD 360
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 165/367 (44%), Gaps = 33/367 (8%)
Query: 153 GPGHSIAVTSK---GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
G HS+A+ S +V S+G GQLGHG E+ P+ + SL GA +
Sbjct: 15 GSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYS 74
Query: 210 MLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
M ++ QVY++G FG G K V P + +L V A G+ T V +
Sbjct: 75 MAVAGGDKQVYSWGWGDFG--RLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATA 132
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
EG+++ F + + G + + +EP L+ L+ VV +A G + + C S V
Sbjct: 133 EGQLFAFGRNQNGQCGLGSIQDCLEPQ-LVTALQGKEVVAVACGAEHSM---CVTSEGEV 188
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y G G G +G G D P L + + ++ V G H+ V + G + TWGWG
Sbjct: 189 YCWGWGRYGNIGDGESQDRHLPTLAKGLE--GVKVAQVNCGWRHSIAVDEGGAMYTWGWG 246
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE--SASLG 446
Y L G+ + VPK V+A+ V VA G T G +++ G + +G
Sbjct: 247 AYAQLMQGDRKDHYVPKRVEAVQQVAT--VAGGWRHTMAADSQGRLFASGWNKFGQCGVG 304
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
HN +V+ Q V +L ERVVQ+ W HT A+T +GK +++G
Sbjct: 305 HN----------EDVVRVQQVEAL--AGERVVQVKSG----WK-HTMAVTHTGKFFSWGR 347
Query: 507 GDKGQLG 513
GQLG
Sbjct: 348 NVNGQLG 354
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 143/320 (44%), Gaps = 29/320 (9%)
Query: 199 IIQAAAGAGRTM-LIS--DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
+I A G+ ++ LIS V ++G+ G+ +G + PQ V SL +
Sbjct: 9 VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDR--QEPQAVFSLLHRGATS 66
Query: 256 AAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
G + AV + +VY++ WG+ RLG + P PL L V +A G
Sbjct: 67 VHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLP-ALAGRRVASVACGDT 125
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+ L + +++ G G+ G GS D P+L+ Q + V VA GA H+
Sbjct: 126 HTLVATAEGQ---LFAFGRNQNGQCGLGSIQDCLEPQLVTALQ--GKEVVAVACGAEHSM 180
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
V +G V WGWGRYG +G G + +P + + L VK V G + V E G +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G G A L QG+R + + P+ V +++QV T + W HT A
Sbjct: 241 YTWGWGAYAQL-------MQGDRKDHYV-PKRVEAVQQV--------ATVAGGWR-HTMA 283
Query: 495 LTESGKLYAFGAGDKGQLGI 514
G+L+A G GQ G+
Sbjct: 284 ADSQGRLFASGWNKFGQCGV 303
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G H++ T++G +++FG N +GQ G G+ ++ P+ + +LQG ++ A
Sbjct: 115 RRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVAC 174
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
GA +M ++ G+VY +G +G G + + P L + L+ + V Q G +
Sbjct: 175 GAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHL--PTLAKGLEGVKVAQVNCGWRHSI 232
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQP 323
+ G +YT+ WG A+L D + H + +E + V +A G+ + +A Q
Sbjct: 233 AVDEGGAMYTWGWGAYAQL----MQGDRKDHYVPKRVEAVQQVATVAGGWRHTMAADSQG 288
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRV 382
+++ G G+ G G D ++Q + L + VV W H V G+
Sbjct: 289 R---LFASGWNKFGQCGVGHNEDVVR---VQQVEALAGERVVQVKSGWKHTMAVTHTGKF 342
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALN 411
+WG G LGH + + P + AL+
Sbjct: 343 FSWGRNVNGQLGHSGMQDSNSPVELAALS 371
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 440
V +WG G G LGHG+ E P+ V +L A V G +Y+ V D VYS+G G
Sbjct: 31 VLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWG 90
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LG + D V P + +L RV ++ ++ HT T G+
Sbjct: 91 DFGRLGTGDVKD--------VFIPCPLPAL--AGRRVASVACGDT-----HTLVATAEGQ 135
Query: 501 LYAFGAGDKGQLGIELVNNQTE 522
L+AFG GQ G+ + + E
Sbjct: 136 LFAFGRNQNGQCGLGSIQDCLE 157
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 23/297 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSF--GSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N++ +A G HS AVT G ++++ G++S G LGHG W P+ + L+GIR+
Sbjct: 360 NTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSV 419
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G T L++ AGQ++ FG +FG +G + + V P+ VESLK + V+ A G +
Sbjct: 420 ACGVWHTALVTSAGQLFTFGDGTFGVLGHGDK--RSVALPKEVESLKGLKTVRVACGVWH 477
Query: 263 TAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
TA + G+++T+ G+ RLGH + + P + L + Q+A
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVP-TCVAALVDYNFKQVAC 536
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G+ +AL V+++G L G+LG R D K P L+E +L +A GA+
Sbjct: 537 GHTLTVALTINGR---VFTMGSSLYGQLGD-VRADGKLPGLVEG-RLWEAFVEEIACGAY 591
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
H AV+ V TWG G G LGHG+ + P +V+AL + + VA G T +
Sbjct: 592 HVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAI 648
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 159/365 (43%), Gaps = 40/365 (10%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G V+ +G S G G + P+ + S + + A G L++ G+V+ +G
Sbjct: 275 GDVFLWG-ESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGD 333
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 282
+S G +GV V P+LVE+L A G + + ++ G ++T WG+
Sbjct: 334 ESGGRLGHGVDVD--VAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFT--WGDGTHS 389
Query: 283 ---LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
LGH + + P + G LE I V +A C + A S +++ G G G L
Sbjct: 390 YGLLGHGNDISHWTPKRVGGPLEGIRVSSVA---CGVWHTALVTSAGQLFTFGDGTFGVL 446
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWG 388
GHG + P+ +E + L+ V VA G WH A V G G++ TWG G
Sbjct: 447 GHGDKRSVALPKEVESLK--GLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDG 504
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGHG++E + VP V AL D VA G T ++ +G V++ G LG +
Sbjct: 505 DKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLG-D 563
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
ADG+ P LV R+ + + H LT ++Y +G G
Sbjct: 564 VRADGK--------LPGLVEG------RLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGA 609
Query: 509 KGQLG 513
G+LG
Sbjct: 610 NGRLG 614
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 29/278 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ VTS G +++FG + G LGHG P+ + SL+G++ ++ A G
Sbjct: 417 SSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVW 476
Query: 208 RTMLISD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T + + +G+++ +G G +G + KLV P V +L + Q
Sbjct: 477 HTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV--PTCVAALVDYNFKQV 534
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
A G+ T L+ GRV+T +LG + P + G L V +IA G ++
Sbjct: 535 ACGHTLTVALTINGRVFTMGSSLYGQLG-DVRADGKLPGLVEGRLWEAFVEEIACGAYHV 593
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AW 371
L + VY+ G G G+LGHG D P L+E + ++ V +G
Sbjct: 594 AVLTAK---TEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAICL 650
Query: 372 HAAVVGQDGRVCT-------WGWGRYGCLGHGNEECES 402
H V G D +C+ + R+ C G+ C S
Sbjct: 651 HKWVSGADQSLCSGCRQPFGFTRKRHNCYNCGHAFCHS 688
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 157/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + A G L+S G+V+ +G+ S G +G+ K VT PQL+ES
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGM--GKDVTGPQLIES 325
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH T+ + P + G LE +
Sbjct: 326 LAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL- 384
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
QIA+ C A S +++ G G G LGHG + +PR +E L L+ +
Sbjct: 385 --QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVE--SLSGLRTIA 440
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WHAA + + G++ TWG G LGHG++E P V AL D
Sbjct: 441 VACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHT 500
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G VY+ G LG N ADG+ P LV K +
Sbjct: 501 FHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG-NPNADGK--------LPCLVED-KLIK 550
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ V +I+ Y H LT +++ +G G G+LG
Sbjct: 551 DCVEEIAC--GAY---HVAVLTSRNEVFTWGKGANGRLG 584
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 147/290 (50%), Gaps = 22/290 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G++I + G T
Sbjct: 337 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 396
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG +FG +G + T V P+ VESL + + A G + A +
Sbjct: 397 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 454
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ +RLGH + + ++P + +++ ++A G+ +
Sbjct: 455 IVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHT-FHRVACGHSLTVG 513
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + VY++G + G+LG+ D K P L+E +L+ +A GA+H AV+
Sbjct: 514 LT---TSGKVYTMGSTVYGQLGN-PNADGKLPCLVED-KLIKDCVEEIACGAYHVAVLTS 568
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ E P +V L + ++A G T +
Sbjct: 569 RNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAI 618
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 33/275 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E + PR + SL G+R I A G I
Sbjct: 392 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 451
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +G+++ +G +G + ++L P V +L + + A G+
Sbjct: 452 VEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL--KPTCVSALIDHTFHRVACGHS 509
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLAL 319
T L+ G+VYT +LG+ PN P L L V +IA G ++ L
Sbjct: 510 LTVGLTTSGKVYTMGSTVYGQLGN---PNADGKLPCLVEDKLIKDCVEEIACGAYHVAVL 566
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAA 374
S V++ G G G+LGHG D K P L++ + +++ + AA H
Sbjct: 567 T---SRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKW 623
Query: 375 VVGQDGRVCT-------WGWGRYGCLGHGNEECES 402
V G + C+ + R+ C G C S
Sbjct: 624 VSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 658
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
GSR+D P+ +E +L++ + A G HAA+V + G V TWG G LGHG +
Sbjct: 260 GSRSDVLIPKPLESNVVLDVHHI--ACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDV 317
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+ P+++++L VA G++ T V+ G++Y++G G HNA G G ++
Sbjct: 318 TGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGT-----HNAGLLGHGTDVSHW 372
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ +QI+ + W HT +T +G+L+ FG G G LG
Sbjct: 373 IPKRISGPLEG-----LQIASVSCGPW--HTALITSTGQLFTFGDGTFGVLG 417
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHG W P+ I +L+G+ + + G T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ GQ++ FG +FG +G + + ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITTMGQLFTFGDGTFGVLGHGNRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEV 254
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFHRIACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V S+G + G+LG+ R+D K P L+E+ N+ V VA G++H AV+
Sbjct: 314 LT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV--VQVACGSYHVAVLTI 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E +P +V+AL D H+A G
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACG 410
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 36/340 (10%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
RP+P+ S + G + L++ G+V+ +G++S G +G + + P+L+E
Sbjct: 67 RPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIE 124
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 304
SL V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 125 SLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGL 184
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V ++ G + + +++ G G G LGHG+R P+ +E L L+ +
Sbjct: 185 AVAYVSCGTWHTALITTMGQ---LFTFGDGTFGVLGHGNRESISCPKEVE--SLSGLKTI 239
Query: 365 VVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+A G T ++ G V S G N + GN ++ P LV + V
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMG---------NTVYGQLGNPRSDGKIPCLVEEI--V 348
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E VVQ++ + H LT +++ +G G G+LG
Sbjct: 349 GENVVQVACG-----SYHVAVLTIKSEVFTWGKGANGRLG 383
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 33/288 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + G +A++++ G V+T+ + RLGH + + + HP L
Sbjct: 65 VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 356
+E++ V + C + +Y+ G G G LGHG P+ I
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG- 179
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L L V+ G WH A++ G++ T+G G +G LGHGN E S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239
Query: 417 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
VA G + T + E G ++++G G+ LGH G++ L P
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH-------GDKEPR-LKPT 291
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V SL ++ +I+ +S+ T LT SGK+ + G GQLG
Sbjct: 292 CVASL--IDYDFHRIACGHSL-----TVGLTTSGKVLSMGNTVYGQLG 332
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 163/337 (48%), Gaps = 26/337 (7%)
Query: 125 CGGSWKL-------VLRFLLAGEACC----RRENSQAIAGPGHSIAVTSKGVVYSFGSNS 173
C G W L L+ ++A C R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
GQLGH E +P I +L I+ A G ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQL--GL 118
Query: 234 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 291
+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQ 178
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
P + +LE IP+ Q+ AG + AL+ SG AV+ G G+LG D + P
Sbjct: 179 ASPQR-VRSLEGIPLAQVVAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 352 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ +LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L
Sbjct: 235 HV---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 411 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+ +A G +T V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V PQ+ + + V + A G + L +G VYT +LGH E N E
Sbjct: 21 IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 356
+G L + +V +A G + LAL+ Q ++S G G G+LG + D PRLI++
Sbjct: 78 IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTIEDSVAVPRLIQK- 133
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 414
LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V++L +
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
V G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + A G ++ + + G+VY G ++ G+ + +G K P+ + +L + +V A
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 91
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + LS +G+++++ G+D +LG T + V L+ L ++Q++ G + LA
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
LA ++ G G+LG G + P+ + + + L VV AG H+ +
Sbjct: 152 LAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV--AGGAHSFALS 206
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++F
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 496
G G LGH+++ D R L+ + V QI+ HT A
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 311
Query: 497 ESGKLYAFGAGDKGQLG 513
SG +YAFG G +GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AG
Sbjct: 141 QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 316 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 12/258 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ +G ++S+G+ S GQLG T E+ PR I+ L I+Q + G +
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQ + +G++S G+ G + SPQ V SL+ I + Q G + LS G
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N +LG E D E + L VV I+ G + L SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVVYISCGEEHTAVLT--KSG-GVFTF 266
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRY 390
G G G+LGH S DE +PR + +L+ + +A G H A V G + +G G
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 391 GCLGHG---NEECESVPK 405
G LG G N +C S K
Sbjct: 325 GQLGTGHTCNVKCPSPVK 342
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q +AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 174/375 (46%), Gaps = 35/375 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ ++G+ GQLG G EE+ + +L+ ++ AG+ ++ I D G+++ +G +
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPAE-TKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 286 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
E D L + + V Q+AAG + + L + V++ G
Sbjct: 126 EPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH---VWT----WGQP 178
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G P ++ + + L +A GA+H + +DG + WG YG LG G+
Sbjct: 179 WPPGDIKQISVPVRVQGLEKVKL----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDT 234
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ S P VQ L+ + + +A G + + +++DG+VY +G GE LG N
Sbjct: 235 QPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD------NDK 288
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
++ + PQ V L E +VQ+S + H+ ALT+ G++++FG GD G+LG
Sbjct: 289 SSKMVPQKVNLL--AGEDIVQLSCGGT-----HSVALTQDGRMFSFGRGDHGRLGY---G 338
Query: 519 NQTERGNPERVDIDL 533
+ G P V D+
Sbjct: 339 KKVTTGQPVEVPTDI 353
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P +++L + I+QAA G
Sbjct: 44 VAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA--------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ + D G+ YA+G + +G+ + G + + PQ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQ--RCAPKLVVRQVAAGGT 161
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALA 320
+ VL+REG V+T+ G P D++ + ++ + V+ IA G + LAL
Sbjct: 162 HSVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLAL- 212
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
Q G +++ G G+LG G P ++ L L V +AAG WH+ + DG
Sbjct: 213 -QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDDG 268
Query: 381 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V WG G +G LG G+ + S VP+ V L + ++ G + +++DG ++SFG
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG 328
Query: 439 CGESASLGH 447
G+ LG+
Sbjct: 329 RGDHGRLGY 337
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ G ++++G+N GQLG G T+ +P P++ L G+ ++ AAG + ++D
Sbjct: 208 HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD 267
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VY +G+ G +G PQ V L +VQ + G + L+++GR+++F
Sbjct: 268 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSF 327
Query: 276 SWGNDARLGHHTE---------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
G+ RLG+ + P D+ P L E A G+ +AC
Sbjct: 328 GRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEE------AEGHWIAKLVAC 376
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 24/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHT 431
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ +GQ++ FG +FG +G + K V+ P+ +ESLK + VQAA G + TA +
Sbjct: 432 AVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEV 489
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + + P ++ +E P Q+A G+ +
Sbjct: 490 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVE--PNCQVACGHSMTV 547
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL+ SG VY++G + G+LG+ ++ D K P +E +L +A GA+H AV+
Sbjct: 548 ALS--RSGH-VYTMGSCVYGQLGN-TQADGKLPIRVEG-KLSKSFVEEIACGAYHVAVLT 602
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + P +V+AL D + +A G T +
Sbjct: 603 SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 161/370 (43%), Gaps = 45/370 (12%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ GSN G + P+ + S + + A G L++ G+V+++G++S
Sbjct: 287 VHQVGSN------FGVKMDSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEES 340
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARL 283
G +GV V P+L+ESL N + A G + T ++ G +YT+ G N L
Sbjct: 341 GGRLGHGVDSD--VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLL 398
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + + P + G LE I V I+ G + + S +++ G G G LGHG
Sbjct: 399 GHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT---SSGQLFTFGDGTFGALGHGD 455
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYG 391
R PR IE L L+ V A G WH A V + G++ TWG G G
Sbjct: 456 RKSVSLPREIE--SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 513
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHG++E + VP V L + VA G T +S G VY+ G LG N A
Sbjct: 514 RLGHGDKESKLVPTCVVTLVEPNC-QVACGHSMTVALSRSGHVYTMGSCVYGQLG-NTQA 571
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKG 510
DG+ P V E + S I A H LT +++ +G G G
Sbjct: 572 DGK--------LPIRV-------EGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANG 616
Query: 511 QLGIELVNNQ 520
+LG N++
Sbjct: 617 RLGHGDTNDR 626
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 43/321 (13%)
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 286
+ +GV+ L+ P+ +ES + V A G A+++++G V FSWG ++ RLGH
Sbjct: 292 SNFGVKMDSLL--PKALESAVVLDVQNIACGGKHAALVTKQGEV--FSWGEESGGRLGHG 347
Query: 287 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
+ +DV PHP L+ +L N + +A G + A+ + + G G LGHG++
Sbjct: 348 VD-SDV-PHPKLIESLSNTNIELVACGEYHTCAVTLS-GDLYTWGDGTYNYGLLGHGNQV 404
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
P+ + L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+
Sbjct: 405 SHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPR 463
Query: 406 VVQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADG 453
+++L ++ + A G + T V E G ++++G G+ LGH
Sbjct: 464 EIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------ 517
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G++ + L P V +L + N Q++ +S+ T AL+ SG +Y G+ GQLG
Sbjct: 518 -GDKESK-LVPTCVVTLVEPN---CQVACGHSM-----TVALSRSGHVYTMGSCVYGQLG 567
Query: 514 IELVNNQTERGNPERVDIDLS 534
N Q + P RV+ LS
Sbjct: 568 ----NTQADGKLPIRVEGKLS 584
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR I SL+G+R +QAA G T +
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAV 486
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + +KLV P V +L Q A G+
Sbjct: 487 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV--PTCVVTLVEPN-CQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T LSR G VYT +LG +T+ + P + G L V +IA G ++ L
Sbjct: 544 SMTVALSRSGHVYTMGSCVYGQLG-NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S V++ G G G+LGHG D P L+E + ++ + AA H V
Sbjct: 603 ---SRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGVDQSMCS 668
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 147 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
N Q G ++A++ G VY+ GS GQLG+ + + R L + + A GA
Sbjct: 536 NCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGA 595
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +V+ +GK + G +G T +P LVE+LK+ V A G FTA +
Sbjct: 596 YHVAVLTSRTEVFTWGKGANGRLGHG--DTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 653
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 184/404 (45%), Gaps = 36/404 (8%)
Query: 133 LRFLLAGEA--CCRRENSQAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEWRP 188
L FL + A CC + HS A S G VY +GSN + QL G E+ P
Sbjct: 362 LYFLASDYASNCCSGPDENCNNSTSHSNANLSGSCGEVYVWGSNCTHQLAEGGQEKITTP 421
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES- 247
+ + Q AG T LI G V A GK S+G G V L +
Sbjct: 422 KYSAVFTDCQ--QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKK 479
Query: 248 -LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
+K I + + G+ + L+ G VY++ G+ +LGH T P + G L V
Sbjct: 480 YVKKISSSKGSDGH--SLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVV 537
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
++AGY + A+ +Y+ G G G+LGH + + P ++ + + L V
Sbjct: 538 KCVSAGYRHSAAVT---EDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL----V 590
Query: 367 AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
A G H V QDG+ + ++G G G LGHG+ + PKV++ALN + VA G ++
Sbjct: 591 ACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSS 650
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
V+ G +Y++GCG AI G G+ L P+LV L+ ++R+V I+ +S
Sbjct: 651 LAVTSSGQLYAWGCG--------AIL-GCGSAEYTALRPRLVEDLQ--SKRMVDIACGDS 699
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H ALT ++YA+G GQ G + R P+RV
Sbjct: 700 -----HVIALTHESEVYAWGNNAMGQCGQGHAQSPITR--PKRV 736
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 170/347 (48%), Gaps = 24/347 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSLQGIRIIQAAAGA- 206
Q AG + + S G V + G S G+LG G + P+ P+ + ++ I ++ G+
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSD 491
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAV 265
G ++ ++ G+VY++G +G+ +G T+ + P+LV+ L V + G +A
Sbjct: 492 GHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKI--PKLVKGPLVGKVVKCVSAGYRHSAA 549
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G +YT+ G RLGH + P + ++E++ +V + LA G
Sbjct: 550 VTEDGELYTWGDGEFGRLGHDYTSSKNFPTKV-QSIESVGLVACGGSH----TLAVSQDG 604
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++S G G GKLGHG + P++IE L ++ V A G+ + V G++ W
Sbjct: 605 KTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKV--ACGSQSSLAVTSSGQLYAW 662
Query: 386 GWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G G LG G+ E ++ P++V+ L + + +A GD ++ + +VY++G
Sbjct: 663 GCG--AILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWG------ 714
Query: 445 LGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+NA+ GQG+ + + P+ V L V+ V ++S+ W A
Sbjct: 715 --NNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 18/180 (10%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++AV+ G ++SFG +G+LGHG T + +P+ I +L G+ I + A G+ ++
Sbjct: 593 GGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLA 652
Query: 212 ISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +GQ+YA+G + G AEY P+LVE L++ +V A G+ L+
Sbjct: 653 VTSSGQLYAWGCGAILGCGSAEY------TALRPRLVEDLQSKRMVDIACGDSHVIALTH 706
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
E VY +WGN+A GH P P ++G L+ + V Q++AG + +A P+
Sbjct: 707 ESEVY--AWGNNAMGQCGQGHAQSP-ITRPKRVIG-LDGVSVHQVSAGTSHSVAWTALPT 762
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G + G+LG+ + + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACG 410
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 153/339 (45%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
QIA C A S +++ G G G LGHG+ PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V++ G LG N +DG+ P LV K +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGR---------PCLVED-KIAS 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+QI+ + H LT +++ +G G G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383
>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
Length = 1120
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + + A G L++ G+V+ +G++S G +GV K V P+LVE+
Sbjct: 269 PRPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGV--GKNVVQPRLVEA 326
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + V A G F + ++ G +YT+ G N LGH ++ + P + G LE +
Sbjct: 327 LTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQ 386
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
+ +A G + A S +++ G G G LGHG R + +PR +E LL L+ +
Sbjct: 387 IAFVACGPWH---TALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIA 441
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 442 VACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSN 501
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T +++ G V++ G LG N +DG+ P L V
Sbjct: 502 FHKIACGHSLTAGLTKSGRVFTMGSTVYGQLG-NPQSDGK--------VPCL------VG 546
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+++ + S+ H LT ++Y +G G G+LG
Sbjct: 547 DKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLG 585
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 149/284 (52%), Gaps = 24/284 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G ++++G LGHG+ W P+ I L+G++I A G T
Sbjct: 338 GEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHT 397
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
L++ GQ++ FG +FG +G + + V+ P+ VESL + + A G + TA +
Sbjct: 398 ALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEV 455
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + +IA G+
Sbjct: 456 IATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVAALIDSNFHKIACGHSLTAG 514
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAVVG 377
L SG V+++G + G+LG+ ++D K P L+ ++ +++ + A GA+H AV+
Sbjct: 515 LT--KSGR-VFTMGSTVYGQLGN-PQSDGKVPCLVGDKIARESIEEI--ACGAYHVAVLT 568
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 569 SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 44/320 (13%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQL-------VESLKNIFVVQAAIGNFFTAVLSR 268
G VY +G+ + + G SP+ +ES + V A G ++++R
Sbjct: 236 GDVYIWGEVTCENVKVGADKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASLVTR 295
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA- 327
+G V+T+ + LGH N V+P L+ L + V +A G + A+ MA
Sbjct: 296 QGEVFTWGEESGGCLGHGVGKNVVQPR-LVEALTSTTVDFVACGEFHSCAVT-----MAG 349
Query: 328 -VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
+Y+ G G G LGHGS P+ I L LQ VA G WH A+V G++ T
Sbjct: 350 ELYTWGDGTHNAGLLGHGSDVSHWIPKRIAG-PLEGLQIAFVACGPWHTALVTSTGQLFT 408
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGD 433
+G G +G LGHG+ + S P+ V++L ++ I VA G + T V E G
Sbjct: 409 FGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGK 468
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
++++G G+ LGH G++ A L P V +L ++ +I+ +S+ T
Sbjct: 469 LFTWGDGDKNRLGH-------GDKEAR-LKPTCVAAL--IDSNFHKIACGHSL-----TA 513
Query: 494 ALTESGKLYAFGAGDKGQLG 513
LT+SG+++ G+ GQLG
Sbjct: 514 GLTKSGRVFTMGSTVYGQLG 533
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 151/335 (45%), Gaps = 34/335 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G V+++G S G LGHG + +PR + +L + A G + +
Sbjct: 286 GVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAV 345
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ AG++Y +G + G G+ K + P +E L+ FV A G + TA+
Sbjct: 346 TMAGELYTWGDGTHNAGLLG-HGSDVSHWIPKRIAGP--LEGLQIAFV---ACGPWHTAL 399
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL------ 319
++ G+++TF G LGH N P + +L + + +A G + A+
Sbjct: 400 VTSTGQLFTFGDGTFGVLGHGDRQNVSYPRE-VESLLGLRTIAVACGVWHTAAVVEVIAT 458
Query: 320 --ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+ S +++ G G +LGHG + P + N +A G A +
Sbjct: 459 HSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHK--IACGHSLTAGLT 516
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYS 436
+ GRV T G YG LG+ + + VP +V ++I +A G Y V++ +VY+
Sbjct: 517 KSGRVFTMGSTVYGQLGNPQSDGK-VPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYT 575
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+G G + LGH I D + TP LV +LK
Sbjct: 576 WGKGANGRLGHGDIEDRK--------TPALVEALK 602
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL G+R I A G T +
Sbjct: 393 GPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAV 452
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARL--KPTCVAALIDSNFHKIACGHS 510
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
TA L++ GRV+T +LG+ V P + + + +IA G ++ L
Sbjct: 511 LTAGLTKSGRVFTMGSTVYGQLGNPQSDGKV-PCLVGDKIARESIEEIACGAYHVAVLT- 568
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 569 --SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK--YIACGSNYSAAI 619
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ R + G H +TSK VY++G ++G+LGHG E+ P + +L+
Sbjct: 544 LVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKD 603
Query: 197 IRIIQAAAGAGRTMLI 212
+ A G+ + I
Sbjct: 604 RHVKYIACGSNYSAAI 619
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 153/285 (53%), Gaps = 24/285 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +YS+G +++ G LGHG W P+ + +L+G+++ + G T
Sbjct: 137 GEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
LI+ GQ++ FG SFG +G K V+ P+ VESL + + A G + TA
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 265 VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+++R G+++T+ G+ RLGH + ++P + TL + ++A G+
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVATLIDHDFYRVACGHSLT 313
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL SG V S+G + G+LG+ +D + P L+E +++ Q + +A G++H AV+
Sbjct: 314 VALTT--SGQ-VLSMGNAVYGQLGN-PHSDGRIPCLVED-KIVGEQVIQIACGSYHVAVL 368
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP +V+ L D ++A G
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACG 413
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 151/343 (44%), Gaps = 41/343 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L+ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V A G F T ++ G +Y SWG N LGH + P + G LE
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELY--SWGDGTHNVGLLGHGNDVGHWIPKRVSGALEG 183
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V ++ G + + S +++ G G G LGHG +PR +E L L+
Sbjct: 184 LQVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVE--SLSGLKT 238
Query: 364 VVVAAGAWHAAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ VA G WH A + + G++ TWG G LGHG++E P V L
Sbjct: 239 IAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATL 298
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
D VA G T ++ G V S G NA+ GN H++ P LV
Sbjct: 299 IDHDFYRVACGHSLTVALTTSGQVLSMG---------NAVYGQLGNPHSDGRIPCLVED- 348
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K V E+V+QI+ + H LT +++ +G G G+LG
Sbjct: 349 KIVGEQVIQIACG-----SYHVAVLTGRNEVFTWGKGANGRLG 386
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 156/351 (44%), Gaps = 38/351 (10%)
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G G + P+ + S + + A G L++ G+V+++G++S G +GV
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD- 343
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPH 295
V P+L++SL NI + A G + T ++ G +YT+ G N LGH E + P
Sbjct: 344 -VLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 402
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+ G LE I V I+ G + A S +++ G G G LGHG R PR +E
Sbjct: 403 RVNGPLEGIHVSSISCGPWHT---AVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVES 459
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESV 403
L L+ V A G WH A V + G++ TWG G G LGHG++E + V
Sbjct: 460 --LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 517
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P V AL + VA G T ++ G VY+ G LG N ADG+
Sbjct: 518 PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGK--------L 568
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
P V E + S I A H LT ++Y +G G G+LG
Sbjct: 569 PNRV-------EGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 612
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 364 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 423
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ +GQ++ FG +FG +G + K V+ P+ VESLK + V+AA G + TA +
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 481
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + L Q+A G+ +
Sbjct: 482 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHSLTV 540
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL SG VY++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 541 ALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPNRVEG-RLSKSFVEEIACGAYHVAVLT 595
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAI 646
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 40/318 (12%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 288
+GV+ L+ P+ +ES + V A G A+++++G V FSWG ++ RLGH +
Sbjct: 286 FGVKLDSLL--PKALESTVVLDVQNIACGGRHAALVTKQGEV--FSWGEESGGRLGHGVD 341
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ + P L+ +L NI + +A G + A+ + + G G LGHG+
Sbjct: 342 SDVLHPK-LIDSLSNINIELVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHW 399
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
P+ + L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+ V+
Sbjct: 400 VPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVE 458
Query: 409 ALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGN 456
+L ++ + A G + T V E G ++++G G+ LGH G+
Sbjct: 459 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GD 511
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
+ A L P V +L + N Q++ +S+ T ALT SG +Y G+ GQLG
Sbjct: 512 KEAK-LVPTCVAALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG--- 560
Query: 517 VNNQTERGNPERVDIDLS 534
N Q + P RV+ LS
Sbjct: 561 -NPQADGKLPNRVEGRLS 577
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 478
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 536
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + P+ + G L V +IA G ++ L
Sbjct: 537 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLT 595
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ + AA H V
Sbjct: 596 ---SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAICLHKWV 652
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 653 SGIDQSMCS 661
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 39/371 (10%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAG 207
A+ P H K ++ +GS G+LG G E+E PR + + I Q A G
Sbjct: 17 AVEYPLHK-----KKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T++I+ G++Y+ G + +G+ + +L QL+ L +AA G + T ++
Sbjct: 72 YTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAACGAYHTLAIN 127
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPS 324
G++ FSWG++ +LG +++ N +E P ++ TL VVQIA G + AL +
Sbjct: 128 EWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMKHAFALT---N 181
Query: 325 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+YS G G+LG G+ E P+ I F + + +A G +H+ + + G V
Sbjct: 182 NGELYSWGSNSEGQLGLGTDIKYEIKPKFISAF--IGIPIAFIACGGYHSIAISKSGAVF 239
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG +G LG + + ++P +Q L + K + A G+ + ++ DG V++ G G
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 502
LGH + ++N + P+ V L + V QIS HT AL S G++Y
Sbjct: 300 QLGHGS--------NSNEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSRGRVY 344
Query: 503 AFGAGDKGQLG 513
A+G G GQLG
Sbjct: 345 AWGLGGAGQLG 355
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 159/325 (48%), Gaps = 21/325 (6%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G +++ +T G +YS G+N GQLGH + R + I L +AA G
Sbjct: 62 EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKAACG 119
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTA 264
A T+ I++ GQ++++G ++ E + G+ + +SP++V++L VVQ A G
Sbjct: 120 AYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAF 177
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ G +Y++ ++ +LG T+ +++P + IP+ IA G + ++A
Sbjct: 178 ALTNNGELYSWGSNSEGQLGLGTDIKYEIKP-KFISAFIGIPIAFIACGGYH--SIAISK 234
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
SG AV+ G G+LG D P ++ Q N + A G + + DG V
Sbjct: 235 SG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTVDGGVF 291
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 442
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 292 TCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Query: 443 ASLGHNAIADGQGNRHANVLTPQLV 467
LG+++ +V TPQ+V
Sbjct: 352 GQLGNHST--------RSVTTPQVV 368
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HSIA++ G V+ +G N+ GQLG T++ P +++LQ +I AA G ++ +
Sbjct: 225 GGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFL 284
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ V L V Q + G T A++ GR
Sbjct: 285 TVDGGVFTCGAGMYGQLGHGSNSNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGR 342
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG+H+ + P + G
Sbjct: 343 VYAWGLGGAGQLGNHSTRSVTTPQVVHG 370
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++ G + G+LG G DE PR ++ + +Q + A G + V+ Q G + +
Sbjct: 28 MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI--ACGENYTVVITQIGEIYSC 85
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH E+ +++ L+ A G Y T ++E G ++S+G L
Sbjct: 86 GNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G N+ ++ +P++V +L VVQI+ H FALT +G+LY++G
Sbjct: 144 GLNS-------KNFMESSPRMVKTLG--TSVVVQIACGMK-----HAFALTNNGELYSWG 189
Query: 506 AGDKGQLGI 514
+ +GQLG+
Sbjct: 190 SNSEGQLGL 198
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 30/257 (11%)
Query: 275 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
F WG+ LG + N + P L + + QIA G Y + + +YS
Sbjct: 29 FCWGSTIHGELGLGGIEDENILIPREL-DFKKAAEIQQIACGENYTVVIT---QIGEIYS 84
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LGH K +LI + A GA+H + + G++ +WG
Sbjct: 85 CGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKA--ACGAYHTLAINEWGQLFSWGSNTE 140
Query: 391 GCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG ++ ES P++V+ L + +A G F ++ +G++YS+G LG
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLG--- 197
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
G + P+ +++ + I + H+ A+++SG ++ +G
Sbjct: 198 ----LGTDIKYEIKPKFISAF-------IGIPIAFIACGGYHSIAISKSGAVFGWGKNTF 246
Query: 510 GQLGIELVNNQTERGNP 526
GQLG+ N+ +R P
Sbjct: 247 GQLGL---NDTQDRNLP 260
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 175/362 (48%), Gaps = 34/362 (9%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
+T+ +Y +G+ S GQLG G E+E P + I Q A G T+ ++ +G+
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
VYA G + + + + + P L+ L + VVQ A G+ + LS G+V SW
Sbjct: 61 VYACGSNDHSQLGHDLPTKR----PLLIPELLDYVVVQIACGSRHSMALSEWGQV--LSW 114
Query: 278 GND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G++ +LG T+ + V+ ++ L + VVQIA G + LAL S +YS G +
Sbjct: 115 GDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALT---SCGELYSWGSNI 171
Query: 336 GGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC-- 392
G+LG + + H + + LL + +A G H+ ++ + V +GWGR C
Sbjct: 172 YGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV--FGWGRNNCGQ 229
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG +E S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 230 LGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH----- 284
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQ 511
G G AN + P++V L + + Q++ N HT AL S G++Y FG G GQ
Sbjct: 285 GFG---ANEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYGFGLGSSGQ 334
Query: 512 LG 513
LG
Sbjct: 335 LG 336
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 149/304 (49%), Gaps = 17/304 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +TS G VY+ GSN QLGH + RP I L ++Q A G+
Sbjct: 44 QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTK--RPLLIPELLDYVVVQIACGSRH 101
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M +S+ GQV ++G + G+ +V P++V L + VVQ A GN + L+
Sbjct: 102 SMALSEWGQVLSWGDNDCGQLGQATD-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDV--EPHPL-LGTLENIPVVQIAAGYCYLLALACQP 323
G +Y SWG++ +LG +T P +V P+ L TL IPV IA G + ++
Sbjct: 161 CGELY--SWGSNIYGQLGVNT-PKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS--- 214
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
AV+ G G+LG T +P ++ + L ++ VA G + + +G V
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGVF 272
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 442
T G G YG LGHG E +P++V L VA G+ +T +V G VY FG G S
Sbjct: 273 TCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332
Query: 443 ASLG 446
LG
Sbjct: 333 GQLG 336
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 13/264 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V S+G N GQLG T ++ + P+ +R L ++Q A G
Sbjct: 94 QIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNN 153
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GV K VT P + +L I V A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSF 211
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S+ V+ + N +LG + E + P L TL + V +A G + + L +
Sbjct: 212 IISKSSAVFGWGRNNCGQLGLNDETSRSYPTQL-KTLRTLGVRFVACGDEFSVFLTNEG- 269
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G G+LGHG +E PR++ +L+ VA G H A+V GRV
Sbjct: 270 --GVFTCGAGAYGQLGHGFGANEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGRVY 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG + + ++P+VV
Sbjct: 326 GFGLGSSGQLGTRSTKSLTLPQVV 349
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS ++ V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 202 AIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GRVY F G+ +LG + + P ++G
Sbjct: 320 SRGRVYGFGLGSSGQLGTRSTKSLTLPQVVIG 351
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
VA G H + GRV G + LGH + P ++ L D + +A G +
Sbjct: 45 VACGHRHTLFLTSSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHS 102
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+SE G V S+G + LG Q V P++V L V++ VVQI+ N+
Sbjct: 103 MALSEWGQVLSWGDNDCGQLG-------QATDQDIVQLPKIVRQL--VSKTVVQIACGNN 153
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+ ALT G+LY++G+ GQLG+ T P R+
Sbjct: 154 -----HSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRL 192
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 148/283 (52%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W PR I +L+G+++ + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + + P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G + G+LG+ + + P L+ ++ N + VA G++H +V+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVGD-KITNEHVLQVACGSYHVSVLTS 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E + VP +V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACG 410
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 158/346 (45%), Gaps = 36/346 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ +G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQ 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + + S +++ G G G LGHG+ PR +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNVKSISCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V++ G LG N +DG+ P LV K N
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGR---------PCLVGD-KITN 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
E V+Q++ + H LT +++ +G G G+LG + +Q
Sbjct: 350 EHVLQVACG-----SYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQ 390
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 134 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 193
R L G+ Q G H +TS+ V+++G ++G+LGHG E++ P + +
Sbjct: 339 RPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEA 398
Query: 194 LQGIRIIQAAAGAGRTMLI 212
L+ + A GA T I
Sbjct: 399 LKDRSVRHIACGANFTAAI 417
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 187/392 (47%), Gaps = 64/392 (16%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA----AGAGRTMLISDAG 216
T K ++SFG NS G+LG + ++++ P+PI S+Q +++ A +G+ + +++ AG
Sbjct: 163 TKKAYIWSFGKNSDGELGISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSAIVTKAG 221
Query: 217 QVYAFGKDSFGEAEYGVQGTK-----LVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREG 270
++Y G G+ G+Q T + + +K N V Q A G++ T L ++G
Sbjct: 222 ELYVSGSQLHGKL--GIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDG 279
Query: 271 RVYTFSWGN--DARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+V F+WG ++G + + + EP + G L+ +V I G + +AL Q
Sbjct: 280 QV--FAWGGTLHKKVGEKNAQAQNNEPRIVSG-LQGKQIVHIDCGDFHSVALDIQGR--- 333
Query: 328 VYSVGCG----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 382
VYS G G G+ GHG+ D + P ++ + + + V ++AG +H A+ +D +
Sbjct: 334 VYSWGGGGASYNKGQCGHGNNEDIEQPIQVQ--GIAHRKIVQISAGGFHTLALCEEDNEL 391
Query: 383 CTWGWGRYGCLGHGNEECESVPKVV---------QALNDVKA-----------IHVATGD 422
WG G YG G G + S PK+V Q +N ++ ++ G
Sbjct: 392 YAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGG 451
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+ T +++ G VYSFG G LG + N +PQLV L N + +
Sbjct: 452 HHTLLLTSRGRVYSFGYGSHGQLGLRST--------KNFCSPQLVKDLLSKNIKAIAAG- 502
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
WN H+ L++ G L+A G G+ GQLG+
Sbjct: 503 -----WN-HSLILSDKGDLFACGYGNHGQLGL 528
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRI----IQAAAG 205
+G HS VT G +Y GS G+LG + + + GI++ Q A G
Sbjct: 209 SGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACG 268
Query: 206 AGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
T+ + GQV+A+G GE Q + P++V L+ +V G+F
Sbjct: 269 DYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNE----PRIVSGLQGKQIVHIDCGDFH 324
Query: 263 TAVLSREGRVYTFSWG------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ L +GRVY SWG N + GH + +P + G + + +VQI+AG +
Sbjct: 325 SVALDIQGRVY--SWGGGGASYNKGQCGHGNNEDIEQPIQVQG-IAHRKIVQISAGGFHT 381
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE----------------QFQLLN 360
LAL C+ +Y+ G G G+ G G P++++ +F +
Sbjct: 382 LAL-CEEDN-ELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSS 439
Query: 361 LQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAI 416
+P++ ++AG H ++ GRV ++G+G +G LG + + P++V+ L ++KAI
Sbjct: 440 QKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAI 499
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
A G + ++S+ GD+++ G G LG N
Sbjct: 500 --AAGWNHSLILSDKGDLFACGYGNHGQLGLN 529
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 144/324 (44%), Gaps = 32/324 (9%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-AAIGNFFTAVLSREGRVYTFS 276
+++FGK+S GE Q + + P +++LK + + G+ +A++++ G +Y
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSG 227
Query: 277 WGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+LG H ++ V G N V Q+A G + L C V+
Sbjct: 228 SQLHGKLGIQSVNGMHVSKFTQVTM--FDGIKVNQKVKQVACGDYHTL---CLMQDGQVF 282
Query: 330 SVGCGLGGKLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G L K+G ++ PR++ Q Q V + G +H+ + GRV +WG G
Sbjct: 283 AWGGTLHKKVGEKNAQAQNNEPRIVSGLQ--GKQIVHIDCGDFHSVALDIQGRVYSWGGG 340
Query: 389 ----RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESA 443
G GHGN E P VQ + K + ++ G + T + ED ++Y++G G
Sbjct: 341 GASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSG--- 397
Query: 444 SLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQIS-------LTNSIYWNAHTFAL 495
+ G + + Q + ++ P+ S +++N+ + + +T HT L
Sbjct: 398 TYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLL 457
Query: 496 TESGKLYAFGAGDKGQLGIELVNN 519
T G++Y+FG G GQLG+ N
Sbjct: 458 TSRGRVYSFGYGSHGQLGLRSTKN 481
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 45/284 (15%)
Query: 153 GPGHSIAVTSKGVVYSFG----SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
G HS+A+ +G VYS+G S + GQ GHG E+ +P ++ + +I+Q +AG
Sbjct: 321 GDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFH 380
Query: 209 TM-LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ L + ++YA+G ++GE G+ + + P++V+ K+ Q ++
Sbjct: 381 TLALCEEDNELYAWGSGTYGEC--GLGEFQASSKPKIVKMPKDFVSNQE---------MN 429
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ + FS PL + QI+AG + L L S
Sbjct: 430 QMQNEFAFS----------------SQKPL--------ITQISAGGHHTLLLT---SRGR 462
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G G+LG S + P+L++ LL+ +AAG H+ ++ G + G+
Sbjct: 463 VYSFGYGSHGQLGLRSTKNFCSPQLVKD--LLSKNIKAIAAGWNHSLILSDKGDLFACGY 520
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
G +G LG ++E + V L A ++ G ++VV +D
Sbjct: 521 GNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWVVIDD 564
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG H++ +TS+G VYSFG S GQLG +T+ P+ ++ L I AAG
Sbjct: 445 TQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWN 504
Query: 208 RTMLISDAGQVYAFGKDSFGE 228
++++SD G ++A G + G+
Sbjct: 505 HSLILSDKGDLFACGYGNHGQ 525
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G + G+LG + + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLG--NLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
QIA C A S +++ G G G LGHG PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V++ G LG N +DG+ P LV K +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIAS 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+QI+ + H LT +++ +G G G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 181/400 (45%), Gaps = 66/400 (16%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWR----------PRPIRSLQGIRIIQAAAGAGRTMLISDA 215
V +FG N GQLG G P+ + L G I+ + G+ TM ++ +
Sbjct: 12 VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-----ESLKNIFVVQAAIGNFFTAVLSREG 270
G VY++G S G+ +G K + PQ + E LK +V + G +A ++ +G
Sbjct: 72 GAVYSWGWGSMGQLGHG--DLKSINVPQKIAFFEQEGLKVDYV---SCGGCHSAAVTNDG 126
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPH--------PLLGTLENIPVVQIAAGYCYLLALACQ 322
+Y WG + G P + E PLL + + VV+++ G + AL
Sbjct: 127 TLYM--WG-ETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNL 183
Query: 323 PSGMAVYSVGCGLGGKLGHGS----RTDEK------HPRLIEQFQLLNLQPVV-VAAGAW 371
VY G G G+LG GS TD+ P L+E F N + VV VA GA+
Sbjct: 184 GR---VYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGF---NGEKVVQVACGAF 237
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H+A V + G V WG YG LG G + PK V+ +D+ A+ V+ G + T VV++
Sbjct: 238 HSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKS 297
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
GD Y+FG GE LG + D + P LV +LK + V+Q + S H
Sbjct: 298 GDCYAFGRGEYGRLG---LGDTKSRTR-----PHLVKALK--GQTVIQAACGGS-----H 342
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
T +T G Y G D G+LG+ + P R+D+
Sbjct: 343 TLFVTSDGIAYVAGRPDHGRLGM---TDMKPLSVPTRLDL 379
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 147/310 (47%), Gaps = 22/310 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTM 210
G H++A+T+ G VYS+G S GQLGHG + P+ I +G+++ + G +
Sbjct: 61 GSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSA 120
Query: 211 LISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ G +Y +G+ +G+ E+ L+E + + VV+ + G TA L
Sbjct: 121 AVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAAL 180
Query: 267 SREGRVYTFSWGNDARLG------HHTEPNDV----EPHPLLGTLENIPVVQIAAGYCYL 316
+ GRVY + G+ +LG T+ N + PH L+ VVQ+A G +
Sbjct: 181 TNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPH-LVEGFNGEKVVQVACGAFHS 239
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
A+ Q VY G G LG G +D++ P+ +E F ++ + V+ G WH VV
Sbjct: 240 AAVTEQGH---VYIWGKEDYGMLGVGQTSDQQTPKRVEFFD--DIPALRVSCGGWHTMVV 294
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G +G G YG LG G+ + + P +V+AL I A G T V+ DG Y
Sbjct: 295 AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYV 354
Query: 437 FGCGESASLG 446
G + LG
Sbjct: 355 AGRPDHGRLG 364
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS AVT +G VY +G G LG G T ++ P+ + I ++ + G
Sbjct: 231 QVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWH 290
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
TM+++ +G YAFG+ +G G+ TK T P LV++LK V+QAA G T ++
Sbjct: 291 TMVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTS 348
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLAL 319
+G Y + RLG D++P P L IPV Q++AG + +AL
Sbjct: 349 DGIAYVAGRPDHGRLGM----TDMKPLSVPTRLDLGPIPVRQVSAGGAHSMAL 397
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 327 AVYSVGCGLGGKLGHGSR-------TDEKHPRLIEQF-QLLNLQPVVVAAGAWHAAVVGQ 378
AV + GC G+LG G++ D +Q LL + V V+ G+ H +
Sbjct: 11 AVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTA 70
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYS 436
G V +WGWG G LGHG+ + +VP+ + +K +V+ G + V+ DG +Y
Sbjct: 71 SGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV-NERVVQISLTNSIYWNAHTFAL 495
+G LG + A+ P L+ V +E VV++S + HT AL
Sbjct: 131 WGETHWGQLGLPKEFEA-----AHESFPVKCPLLEGVADESVVKVSCGGT-----HTAAL 180
Query: 496 TESGKLYAFGAGDKGQLGI 514
T G++Y +G GD GQLGI
Sbjct: 181 TNLGRVYVWGRGDSGQLGI 199
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 23/292 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHG W P+ I +L+G+ + + G T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ GQ++ FG +FG +G + + ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITTMGQLFTFGDGTFGVLGHGNR--ESISCPKEVESLSGLKTISVACGVWHTAAIVEV 254
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFHRIACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V S+G + G+LG+ R+D K P L+E+ N+ V VA G++H AV+
Sbjct: 314 LT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV--VQVACGSYHVAVLTI 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
V TWG G G LGHG+ E +P +V+AL D H+A G T + +
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQ 419
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 36/340 (10%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
RP+P+ S + G + L++ G+V+ +G++S G +G + + P+L+E
Sbjct: 67 RPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIE 124
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 304
SL V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 125 SLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGL 184
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V ++ G + + +++ G G G LGHG+R P+ +E L L+ +
Sbjct: 185 AVAYVSCGTWHTALITTMGQ---LFTFGDGTFGVLGHGNRESISCPKEVE--SLSGLKTI 239
Query: 365 VVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+A G T ++ G V S G N + GN ++ P LV + V
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMG---------NTVYGQLGNPRSDGKIPCLVEEI--V 348
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E VVQ++ + H LT +++ +G G G+LG
Sbjct: 349 GENVVQVACG-----SYHVAVLTIKSEVFTWGKGANGRLG 383
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 33/288 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + G +A++++ G V+T+ + RLGH + + + HP L
Sbjct: 65 VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 356
+E++ V + C + +Y+ G G G LGHG P+ I
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG- 179
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L L V+ G WH A++ G++ T+G G +G LGHGN E S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239
Query: 417 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
VA G + T + E G ++++G G+ LGH G++ L P
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH-------GDKEPR-LKPT 291
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V SL ++ +I+ +S+ T LT SGK+ + G GQLG
Sbjct: 292 CVASL--IDYDFHRIACGHSL-----TVGLTTSGKVLSMGNTVYGQLG 332
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 158/325 (48%), Gaps = 21/325 (6%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G +++ +T G VYS G+N GQLGH + R + I L + A G
Sbjct: 112 EIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRK--RLQLIPGLDAFVFKKVACG 169
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTA 264
A T+ +++ GQ++++G ++ E + G+ L+ P +V +L VVQ A G
Sbjct: 170 AHHTLAVNEWGQLFSWGSNA--EGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227
Query: 265 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ G++Y++ +D +LG T+ N+++P L+ +L +P+ I G + ++A
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKP-KLISSLAGVPIAFITCGGYH--SMAISK 284
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
SG AV+ G G+LG + PR ++ Q N + A G + + DG V
Sbjct: 285 SG-AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQ--NAKVCYAACGEEFSVFLTVDGGVF 341
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGES 442
T G G YG LGHGN E +P+ V L ++ G T +V G VY++G G +
Sbjct: 342 TCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA 401
Query: 443 ASLGHNAIADGQGNRHANVLTPQLV 467
LG+N +V TPQ+V
Sbjct: 402 GQLGNNIT--------RSVATPQVV 418
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 184/378 (48%), Gaps = 38/378 (10%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQ 201
RR + I +S VT K + + +GS G+LG G E+E PR + + I Q
Sbjct: 58 RRLACEPIIAVEYS-TVTDKNM-FCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQ 115
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
A G T+LI+ GQVY+ G + +G+ + +L QL+ L + A G
Sbjct: 116 IACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKVACGAH 171
Query: 262 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIAAGYCYLL 317
T ++ G++ FSWG++A +LG +++ N +E PH ++ L VVQ+A G ++L
Sbjct: 172 HTLAVNEWGQL--FSWGSNAEGQLGLNSK-NLIECVPH-MVRALGTSVVVQVACGINHVL 227
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
AL + +YS G G+LG G+ +E P+LI L + + G +H+ +
Sbjct: 228 ALT---NNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISS--LAGVPIAFITCGGYHSMAI 282
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G V WG +G LG + ++P+ +Q L + K + A G+ + ++ DG V++
Sbjct: 283 SKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFT 342
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G G LGH GN +N + P+ V L + V QIS HT L
Sbjct: 343 CGAGMYGQLGH-------GNT-SNEILPRQVMEL--MGSTVTQISCGKR-----HTLGLV 387
Query: 497 ES-GKLYAFGAGDKGQLG 513
S G++YA+G G GQLG
Sbjct: 388 PSRGRVYAWGLGGAGQLG 405
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 110/260 (42%), Gaps = 30/260 (11%)
Query: 275 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
F WG+ LG + N + P L + + QIA G Y + + VYS
Sbjct: 79 FCWGSTIHGELGLGGIEDENILVPREL-DFQKATEIEQIACGENYTVLIT---RDGQVYS 134
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LGH K +LI + V A GA H V + G++ +WG
Sbjct: 135 CGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKV--ACGAHHTLAVNEWGQLFSWGSNAE 190
Query: 391 GCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG ++ E VP +V+AL + VA G ++ +G +YS+G LG
Sbjct: 191 GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLG--- 247
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
G N + P+L++SL V + H+ A+++SG ++ +G
Sbjct: 248 ----LGTDVKNEIKPKLISSLAGVPIAFITCG-------GYHSMAISKSGAVFGWGKNTF 296
Query: 510 GQLGIELVNNQTERGNPERV 529
GQLG+ N+ R P ++
Sbjct: 297 GQLGL---NDTRNRNLPRQL 313
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 319 LACQPSGMAVYSV---------GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVA 367
LAC+P YS G + G+LG G DE PR ++ + ++ + A
Sbjct: 60 LACEPIIAVEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQI--A 117
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
G + ++ +DG+V + G YG LGH E+ +++ L+ VA G + T
Sbjct: 118 CGENYTVLITRDGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLA 175
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
V+E G ++S+G LG N+ ++ P +V +L VVQ++ +
Sbjct: 176 VNEWGQLFSWGSNAEGQLGLNS-------KNLIECVPHMVRALG--TSVVVQVACGIN-- 224
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGI 514
H ALT +GKLY++G+ GQLG+
Sbjct: 225 ---HVLALTNNGKLYSWGSNSDGQLGL 248
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+A++ G V+ +G N+ GQLG T PR +++LQ ++ AA G ++ +
Sbjct: 275 GGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFL 334
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ V L V Q + G T ++ GR
Sbjct: 335 TVDGGVFTCGAGMYGQLGHGNTSNEIL--PRQVMELMGSTVTQISCGKRHTLGLVPSRGR 392
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG++ + P + G
Sbjct: 393 VYAWGLGGAGQLGNNITRSVATPQVVHG 420
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 379 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
D + WG +G LG G E E+ VP+ + + +A G+ T +++ DG VYS
Sbjct: 75 DKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYS 134
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G + LGH +G + QL+ L + V HT A+
Sbjct: 135 CGNNDYGQLGHE-----KGRKRL-----QLIPGLDAFVFKKVACG-------AHHTLAVN 177
Query: 497 ESGKLYAFGAGDKGQLGIELVN 518
E G+L+++G+ +GQLG+ N
Sbjct: 178 EWGQLFSWGSNAEGQLGLNSKN 199
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 23/307 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ G+N QLGH + RP PI LQ +IQ A G+
Sbjct: 40 QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRH 97
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M +++ GQ+ ++G + G+ + ++ P+++ L + VVQ A GN + L+
Sbjct: 98 SMALTEWGQILSWGDNDCGQVGHSTDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTS 156
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALA 320
G +Y SWG++ +LG + P D+ PH PL L T+ IP+ IA G + +L++
Sbjct: 157 CGELY--SWGSNIYGQLGVQS-PKDL-PHSNAPLRLTTILGIPLATIACGGNHSFLIS-- 210
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
AV+ G G+LG + +P ++ + L ++ V G ++ + +G
Sbjct: 211 ---KSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEG 265
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 439
V T G G YG LGHG E +P++V L VA G+ +T +V G VYSFG
Sbjct: 266 GVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGL 325
Query: 440 GESASLG 446
G S LG
Sbjct: 326 GASGQLG 332
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 169/363 (46%), Gaps = 32/363 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +G S GQLG G E E P I + Q A G T+ ++ GQVYA G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 224 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 280
+ + G +L T P + L+ V+Q A G+ + L+ G++ SWG++
Sbjct: 63 NDHHQL-----GHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQI--LSWGDNDC 115
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
++GH T+ + +E +L L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 172
Query: 341 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
S D H + +L + +A G H+ ++ + V WG G LG +E+
Sbjct: 173 VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ 232
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+ P ++++ + V GD + ++ +G V++ G G LGH A
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGA--------SN 284
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVN 518
N + P++V L + + Q++ N HT AL S G++Y+FG G GQLG
Sbjct: 285 NEMIPRMVIEL--MGSTITQVACGNR-----HTLALVPSGGRVYSFGLGASGQLGTRNTI 337
Query: 519 NQT 521
+QT
Sbjct: 338 SQT 340
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 17/266 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A+T G + S+G N GQ+GH T + P+ +R L ++Q A G
Sbjct: 90 QIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNN 149
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GVQ K + +P + ++ I + A G +
Sbjct: 150 HSLALTSCGELYSWGSNIYGQL--GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSF 207
Query: 265 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
++S+ V F WG + +LG + E N P L ++ + V + G Y + L +
Sbjct: 208 LISKSSAV--FGWGKNTCGQLGLNDEQNRAYPSQ-LKSMRTLGVRFVTCGDEYSVFLTNE 264
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 381
V++ G G G+LGHG+ +E PR++ +L+ VA G H A+V GR
Sbjct: 265 G---GVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGR 319
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVV 407
V ++G G G LG N +++PKVV
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%)
Query: 132 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRP 188
+LRFL++ R Q G HS+A+TS G +YS+GSN GQLG + ++ P
Sbjct: 132 ILRFLVS------RTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAP 185
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+ ++ GI + A G + LIS + V+ +GK++ G+ G+ + P ++S+
Sbjct: 186 LRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL--GLNDEQNRAYPSQLKSM 243
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ + V G+ ++ L+ EG V+T GN +LGH N++ P ++ L + Q
Sbjct: 244 RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVI-ELMGSTITQ 302
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
+A G + LAL PSG VYS G G G+LG + + P+++
Sbjct: 303 VACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS ++ V+ +G N+ GQLG + P ++S++ + + G ++ +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++ GR
Sbjct: 262 TNEGGVFTCGAGNYGQLGHGASNNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGR 319
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY+F G +LG + P ++G
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVVIG 347
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
MA+Y G G+LG G +E+ L Q + PV +A G H + +G+V
Sbjct: 1 MALYCWGDASHGQLGLGGIENEQ-ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G + LGH E P + L I +A G + ++E G + S+G +
Sbjct: 60 CGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
+GH+ D + P+++ L V+ VVQI+ N+ H+ ALT G+LY++
Sbjct: 118 VGHSTDNDV-------IELPKILRFL--VSRTVVQIACGNN-----HSLALTSCGELYSW 163
Query: 505 GAGDKGQLGIELVNNQTERGNPERV 529
G+ GQLG++ + P R+
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRL 188
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 121 bits (304), Expect = 9e-25, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 30/312 (9%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 256
R I+ + G LIS++G+++ +GK+ G+ +G+ K+ T+P+ +E + ++
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278
Query: 257 AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
G + + + VY SWG D +LGH T+ ++ + + IAAG+
Sbjct: 1279 ECGGEHSICVDSDYVVY--SWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAG 369
+ + L + SG +YS G G G+LGHGS + P IE ++ +Q +A G
Sbjct: 1337 HTIVL--KKSG-ELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACG 1393
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H+ + +G V +WG G+ G LGHGN E + P++++AL V I + G + T +
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATT 1451
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ +VYS+G GE LGH + N TP++V Q N + L
Sbjct: 1452 DLKNVYSWGLGEHMKLGHGS--------DKNEATPRVVDFFIQKNVSKIVCGLN------ 1497
Query: 490 AHTFALTESGKL 501
HT LT G L
Sbjct: 1498 -HTITLTYPGDL 1508
Score = 120 bits (300), Expect = 2e-24, Method: Composition-based stats.
Identities = 115/421 (27%), Positives = 185/421 (43%), Gaps = 76/421 (18%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGR 208
G H ++ G ++++G N SGQLGHG + + P R L+ R II G
Sbjct: 1226 GWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKR-LEFFRGKSPIIMVECGGEH 1284
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVL 266
++ + VY++G+D FG+ + GTK V+ P+++E + + A G T VL
Sbjct: 1285 SICVDSDYVVYSWGQDKFGQLGH---GTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVL 1341
Query: 267 SREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALA 320
+ G +Y+F +G+ +LGH + P +E + ++G + QIA G+ + ++
Sbjct: 1342 KKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGH--SVI 1399
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
C +G VYS G G G+LGHG+ PRLIE + + ++ G ++
Sbjct: 1400 CSDNG-EVYSWGLGKQGQLGHGNYESIARPRLIEALKGV----TKISCGHFYTMATTDLK 1454
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAI-----HVAT----GDYTTFVVS 429
V +WG G + LGHG+++ E+ P+VV +V I H T GD +S
Sbjct: 1455 NVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLS 1514
Query: 430 EDGDVYSF--------------------GCGESASLGHN---------AIADGQ------ 454
D DV F G S LG N A G+
Sbjct: 1515 NDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGL 1574
Query: 455 -GNRHANVLTPQLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G+ + + T++K VN ++ IS T +T +G LY +G G+ GQ+
Sbjct: 1575 GGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDF-----TAMITSNGALYVWGYGNFGQI 1629
Query: 513 G 513
G
Sbjct: 1630 G 1630
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 119/274 (43%), Gaps = 17/274 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G GHS+ + G VYS+G GQLGHG E RPR I +L+G+ I + G
Sbjct: 1388 TQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHF 1445
Query: 208 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
TM +D VY++G GE + G K +P++V+ V + G T L
Sbjct: 1446 YTMATTDLKNVYSWG---LGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITL 1502
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ G + S ND + D+ P + + G L L
Sbjct: 1503 TYPGDLNNNSLSNDDDVNDFI---DLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVS 1559
Query: 327 AVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+Y+ G G GKLG G D+ P I+ LNL + ++ G A++ +G
Sbjct: 1560 PIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNL--IDISCGTDFTAMITSNGA 1617
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+ WG+G +G +G+G + VP + L D KA
Sbjct: 1618 LYVWGYGNFGQIGNGKTDDAWVPIRI-PLTDSKA 1650
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 52/333 (15%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGI-----RII 200
QAIA G H+I + G +YSFG GQLGHG+ + P I ++ GI +I
Sbjct: 1329 QAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKIT 1388
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q A G G +++ SD G+VY++G G+ +G + + P+L+E+LK V + + G+
Sbjct: 1389 QIACGFGHSVICSDNGEVYSWGLGKQGQLGHG--NYESIARPRLIEALKG--VTKISCGH 1444
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
F+T + VY++ G +LGH ++ N+ P + ++ V +I G + + L
Sbjct: 1445 FYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQK-NVSKIVCGLNHTITLT 1503
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----VVVAAGAWHAAVV 376
G L + S +++ + F ++L P ++ +
Sbjct: 1504 --------------YPGDLNNNSLSNDDD---VNDF--IDLAPSTSNSSSSSSLTNDNNN 1544
Query: 377 GQDGR-----------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHVAT 420
G+ GR + G G +G LG G + + +P ++ +N + I ++
Sbjct: 1545 GRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISC 1604
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G T +++ +G +Y +G G +G+ D
Sbjct: 1605 GTDFTAMITSNGALYVWGYGNFGQIGNGKTDDA 1637
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAI-HV 418
+ + V+ G H A++ + G + TWG + G LGHG + + ++ PK ++ I V
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
G + V D VYS+G + LGH + Q NR P+++ + + +
Sbjct: 1279 ECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NR------PKIIEDISGQKIQAI 1331
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
AHT L +SG+LY+FG GD+GQLG
Sbjct: 1332 AAGF-------AHTIVLKKSGELYSFGYGDQGQLG 1359
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 173/364 (47%), Gaps = 50/364 (13%)
Query: 166 VYSFGSNSSGQLGHGTTEEE---------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+Y +G+ S GQLG G EEE W+P + Q A G T+ ++ +G
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSA-------VNQIACGHRHTLFLTASG 55
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
+VYA G + +Y G +L T P + L++ + Q A G+ + LS G+V F
Sbjct: 56 KVYACGSN-----DYSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQV--F 108
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG++ +LGH ++ + V+ ++ L + VVQIA G + LAL C +YS G
Sbjct: 109 SWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGE---LYSWGS 165
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
L G+LG S D + + L PV +A G H+ ++ + V +GWGR C
Sbjct: 166 NLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAV--FGWGRNNC 223
Query: 393 --LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG +E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 224 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGF- 282
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 509
+N + P++V L + + Q++ N HT AL S G++Y FG G
Sbjct: 283 -------SSNEMLPRMVMEL--MGSTISQVACGNR-----HTLALVPSRGRIYGFGLGSS 328
Query: 510 GQLG 513
GQLG
Sbjct: 329 GQLG 332
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 157/307 (51%), Gaps = 21/307 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H++ +T+ G VY+ GSN QLGH + RP I LQ I Q A G+
Sbjct: 39 NQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELQDYVITQIACGSR 96
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M +S+ GQV+++G + G+ + +V P++V +L + VVQ A G+ + L+
Sbjct: 97 HSMALSEWGQVFSWGDNECGQLGHA-SDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT 155
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPH--PL-LGTLENIPVVQIAAG--YCYLLALA 320
G +Y SWG++ +LG + PND++ P+ L TL IPV IA G + +L++
Sbjct: 156 CCGELY--SWGSNLYGQLG-VSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLIS-- 210
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 211 ---KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTIEG 265
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 439
V T G G YG LGHG E +P++V L VA G+ +T +V G +Y FG
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325
Query: 440 GESASLG 446
G S LG
Sbjct: 326 GSSGQLG 332
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 206
+Q G HS+A++ G V+S+G N GQLGH + ++ + P+ +R+L ++Q A G+
Sbjct: 89 TQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGS 148
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFT 263
++ ++ G++Y++G + +G+ GV + +P + +L I V A G +
Sbjct: 149 NHSLALTCCGELYSWGSNLYGQL--GVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHS 206
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
++S+ V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTIEG 265
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 382
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSRGRI 320
Query: 383 CTWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG N + ++P++V
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQLV 345
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV---------VVAAGAWHAAVV 376
M +Y G G+LG G IE+ Q+L + +A G H +
Sbjct: 1 MELYCWGNASHGQLGLGG---------IEEEQILTPSRIPWKPDSAVNQIACGHRHTLFL 51
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G+V G Y LGH E P + L D +A G + +SE G V+S
Sbjct: 52 TASGKVYACGSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFS 109
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G E LGH + D V P++V +L V++ VVQI+ ++ H+ ALT
Sbjct: 110 WGDNECGQLGHASDQDI-------VKLPKIVRNL--VSKTVVQIACGSN-----HSLALT 155
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G+LY++G+ GQLG+ N+ + P R+
Sbjct: 156 CCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRL 188
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 166/341 (48%), Gaps = 20/341 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 210
AG + AV S G V + G S G+LG+G + P I +R I + G+ G +M
Sbjct: 168 AGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSM 227
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
I GQ++ +G +G+ +G T+ SP+L+E+L + +V A G+ +A + G
Sbjct: 228 AIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDADCGHRHSAAVCDAG 285
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y + G+ RLG P + E Q+ G+ + + L+ G V+S
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTD--GRTVWS 340
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G GKLGHG + P++I+ Q L + +AAG +A V ++G + WG+G
Sbjct: 341 FGAAENGKLGHGDTNRQFRPKIIDALQGLTITQ--IAAGTQISAAVTREGALYVWGFGP- 397
Query: 391 GCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
CLG+G ++E +PKVV+ L+ I +A G+ +++DG V+++G ++
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQC---- 452
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G G+ A +PQ+V L + V T++ W+A
Sbjct: 453 ---GTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVWSA 490
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 35/353 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V+ +GSNSS QL T E++ PR + S+ G +++ AG T + G V A GK
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNL-SVYG-KVMSITAGQYCTFAVLSNGTVMANGKG 188
Query: 225 SFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
S+G G + +SP L+E ++ I + + G+ + + + G+++T+ G+
Sbjct: 189 SYGRLGNGA--SASSSSPILIEFPAPVRKILTSKGSDGH--SMAIGKNGQIWTWGDGDYG 244
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P L+ L + +V G+ + A+ C + Y G G G+LG
Sbjct: 245 KLGHGDSTTQKSPK-LIEALASRVIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGL 300
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 400
G P + + + V G H V+ DGR V ++G G LGHG+
Sbjct: 301 GDALQRSVPVQVPDIR----EASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNR 356
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ PK++ AL + +A G + V+ +G +Y +G G G G+
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCL---------GNGSSDET 407
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P++V L V+ I++ + H ALT+ G ++ +G GQ G
Sbjct: 408 FMLPKVVRGLS--GRVVIDIAIGEN-----HVVALTKDGLVFTWGNNQNGQCG 453
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 32/252 (12%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAG-YCYLLALACQPSGMAVY 329
F WG+++ + D P L N+ V+ I AG YC L S V
Sbjct: 132 FCWGSNSS----QQLTDATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVL----SNGTVM 183
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G G+LG+G+ P LIE F + + H+ +G++G++ TWG G
Sbjct: 184 ANGKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGD 242
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LGHG+ + PK+++AL + G + V + G +Y +G G+ LG
Sbjct: 243 YGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG--- 299
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGD 508
+ D P V +++ ++ V + HT L+ G+ +++FGA +
Sbjct: 300 LGDALQRS-----VPVQVPDIREASQVVCGFN---------HTVVLSTDGRTVWSFGAAE 345
Query: 509 KGQLGIELVNNQ 520
G+LG N Q
Sbjct: 346 NGKLGHGDTNRQ 357
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA R A G HS AV G +Y +G G+LG G + R P++
Sbjct: 261 EALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ--RSVPVQVPDIREA 318
Query: 200 IQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q G T+++S G+ V++FG G+ +G T P+++++L+ + + Q A
Sbjct: 319 SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG--DTNRQFRPKIIDALQGLTITQIAA 376
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G +A ++REG +Y WG LG+ + ++ L V+ IA G +++A
Sbjct: 377 GTQISAAVTREGALYV--WGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVA 434
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
L G+ V++ G G+ G GS P++++ +Q V AG H V
Sbjct: 435 LT--KDGL-VFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVT--AGTTHTFV 487
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTML 211
G H +A+T G+V+++G+N +GQ G G+ + P+ ++ L G I Q AG T +
Sbjct: 428 GENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
Query: 212 ISDA 215
S A
Sbjct: 488 WSAA 491
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 211
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 266
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 485
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G+++T+ G+ RLGH + + P + L Q+A G+ +AL
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 544
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG VY++G + G+LG+ S D K P +E +L +A GA+H AV+
Sbjct: 545 TT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 599
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 150/339 (44%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+ +++G++S G +GV + P+L+++
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDA 356
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + A G F + ++ G +YT+ G+ LGH E + P + LE I V
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + S +++ G G G LGHG + PR ++ L L+ V A
Sbjct: 417 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 471
Query: 368 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
G WH A V + G++ TWG G G LGHGN+E + VP V AL +
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 531
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T ++ G VY+ G L GN HA+ TP V E
Sbjct: 532 CQVACGHSLTVALTTSGHVYTMGSPVYGQL---------GNSHADGKTPNRV-------E 575
Query: 476 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
+ S I A H LT ++Y +G G G+LG
Sbjct: 576 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 614
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 29/363 (7%)
Query: 123 QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
++ G S+ + + LL A E+ + G H++ VT +G +S+G S G+LGHG
Sbjct: 284 RRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 343
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
+P+ I +L I A G + ++ +G +Y +GK FG +G + + V
Sbjct: 344 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 402
Query: 241 SPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P+ V L+ I V A G + TAV++ G+++TF G LGH + + P +
Sbjct: 403 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VD 460
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 350
+L+ + V+ A G + A+ G +++ G G G+LGHG+ K P
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEP 516
Query: 351 RLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
+L+ ++P H+ V G V T G YG LG+ + + ++ +V
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 576
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L+ +A G Y V++ +VY++G G + LGH + D +P LV
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVE 628
Query: 469 SLK 471
SLK
Sbjct: 629 SLK 631
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 40/306 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G +++++G +FSWG ++ RLGH + N +P L+
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LID 355
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ SG +Y+ G G G LGHG+ P+ + F L
Sbjct: 356 ALNTTNIELVACGEFHSCAVTL--SG-DLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLE 411
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ +A G +H AVV G++ T+G G +G LGHG+++ +P+ V +L ++ + A
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAA 471
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH GN+ L P V
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCV 523
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N+ + P
Sbjct: 524 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NSHADGKTPN 572
Query: 528 RVDIDL 533
RV+ L
Sbjct: 573 RVEGKL 578
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 23/254 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G G +G + KLV P V +L Q
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 533
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G VYT +LG ++ + P+ + G L V +IA G +
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGAYH 592
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 593 VAVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC 649
Query: 371 WHAAVVGQDGRVCT 384
H G D +C+
Sbjct: 650 IHRWASGMDQSMCS 663
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH GN ++ +
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 403
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K+VN + I +++ HT +T +G+L+ FG G G LG
Sbjct: 404 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 211
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 266
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 472
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G+++T+ G+ RLGH + + P + L Q+A G+ +AL
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 531
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG VY++G + G+LG+ S D K P +E +L +A GA+H AV+
Sbjct: 532 TT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 586
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 635
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 158/356 (44%), Gaps = 39/356 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+ +++G++S G +GV + P+L+++
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDA 343
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + A G F + ++ G +YT+ G+ LGH E + P + LE I V
Sbjct: 344 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 403
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + S +++ G G G LGHG + PR ++ L L+ V A
Sbjct: 404 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 458
Query: 368 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
G WH A V + G++ TWG G G LGHGN+E + VP V AL +
Sbjct: 459 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 518
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T ++ G VY+ G L GN HA+ TP V E
Sbjct: 519 CQVACGHSLTVALTTSGHVYTMGSPVYGQL---------GNSHADGKTPNRV-------E 562
Query: 476 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ S I A H LT ++Y +G G G+LG V+ +R +P V+
Sbjct: 563 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD---DRNSPTLVE 615
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 29/363 (7%)
Query: 123 QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
++ G S+ + + LL A E+ + G H++ VT +G +S+G S G+LGHG
Sbjct: 271 RRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 330
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
+P+ I +L I A G + ++ +G +Y +GK FG +G + + V
Sbjct: 331 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 389
Query: 241 SPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P+ V L+ I V A G + TAV++ G+++TF G LGH + + P +
Sbjct: 390 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VD 447
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 350
+L+ + V+ A G + A+ G +++ G G G+LGHG+ K P
Sbjct: 448 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEP 503
Query: 351 RLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
+L+ ++P H+ V G V T G YG LG+ + + ++ +V
Sbjct: 504 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 563
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L+ +A G Y V++ +VY++G G + LGH + D +P LV
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVE 615
Query: 469 SLK 471
SLK
Sbjct: 616 SLK 618
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 40/306 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G +++++G +FSWG ++ RLGH + N +P L+
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LID 342
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ SG +Y+ G G G LGHG+ P+ + F L
Sbjct: 343 ALNTTNIELVACGEFHSCAVTL--SG-DLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLE 398
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ +A G +H AVV G++ T+G G +G LGHG+++ +P+ V +L ++ + A
Sbjct: 399 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAA 458
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH GN+ L P V
Sbjct: 459 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCV 510
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N+ + P
Sbjct: 511 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NSHADGKTPN 559
Query: 528 RVDIDL 533
RV+ L
Sbjct: 560 RVEGKL 565
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 23/254 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G
Sbjct: 403 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 462
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G G +G + KLV P V +L Q
Sbjct: 463 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 520
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G VYT +LG ++ + P+ + G L V +IA G +
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACGAYH 579
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 580 VAVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC 636
Query: 371 WHAAVVGQDGRVCT 384
H G D +C+
Sbjct: 637 IHRWASGMDQSMCS 650
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 280 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 337
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH GN ++ +
Sbjct: 338 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 390
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K+VN + I +++ HT +T +G+L+ FG G G LG
Sbjct: 391 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 433
>gi|269793990|ref|YP_003313445.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096175|gb|ACZ20611.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 900
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQA-AAG- 205
Q AGP HS+A+ G VY++GS +SGQLGHG+ E P R L G R++Q AAG
Sbjct: 107 QVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGT 166
Query: 206 --AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
A ++ + D G VY +G++ G A + V+ L L +L+ V+ A G+
Sbjct: 167 DDASTSLAVVDDGTVYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTG 226
Query: 264 AVLSREGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
L+ +GR F+WG N A T + P P++G + AG
Sbjct: 227 VALTADGR--AFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAV 284
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQ 378
G A Y G G G LG G + P L +E L ++PV + +G + V+G
Sbjct: 285 IDDDGRA-YGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQITSGQNFSVVLGA 343
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA---LNDVKAIHVATGDYTTFVVSEDGDVY 435
DGR+ WG G G LG+G V L+ V+ +HV+ G T + DG VY
Sbjct: 344 DGRLAAWGNGTGGQLGNGASATSWHAVAVGTDGVLDGVEVVHVSAGQRHTVALGRDGQVY 403
Query: 436 SFGCGESASLGHN 448
++G G S LG+
Sbjct: 404 AWGQGLSGELGNG 416
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 185/387 (47%), Gaps = 33/387 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR---SLQGIRIIQAAAGAGR 208
AG HS+ V G V+++G+N+SGQLG GTT P P+ +L G+R++Q AAG
Sbjct: 55 AGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAAGPEH 114
Query: 209 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ ++D G VYA+G + G+ +G V+G+ + + + V+AA + + L+
Sbjct: 115 SLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDASTSLA 174
Query: 268 --REGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+G VYT+ R GH E + EP L G LE V++AAG+ +AL
Sbjct: 175 VVDDGTVYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALTADGR 234
Query: 325 GMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
++ G + G +G G S ++ L + V +G AV+ DGR
Sbjct: 235 ---AFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAVIDDDGRA 291
Query: 383 CTWGWGRYGCLGHGNEECESVPKV--VQALND--VKAIHVATGDYTTFVVSEDGDVYSFG 438
WG G +G LG G P + ++AL+ ++ + + +G + V+ DG + ++G
Sbjct: 292 YGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQITSGQNFSVVLGADGRLAAWG 351
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
G LG+ A A + HA + V L V VV +S HT AL
Sbjct: 352 NGTGGQLGNGASAT---SWHAVAVGTDGV--LDGVE--VVHVSAGQR-----HTVALGRD 399
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERGN 525
G++YA+G G G+LG N T RG+
Sbjct: 400 GQVYAWGQGLSGELG-----NGTGRGS 421
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 142/322 (44%), Gaps = 23/322 (7%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 259
+ AAG ++L+ G+V+A+G ++ G+ G G LV P V+ +L + VVQ A G
Sbjct: 52 RVAAGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAAG 111
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC--YLL 317
+ L+ +G VY + G +LGH + P + G L+ VVQ+ A
Sbjct: 112 PEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDAST 171
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+LA G VY+ G LGG+ GH L + V VAAG +
Sbjct: 172 SLAVVDDGT-VYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALT 230
Query: 378 QDGRVCTWGWGRYGCLGHG-NEECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGD 433
DGR WG G +G G + P V AL+ + + +G T V+ +DG
Sbjct: 231 ADGRAFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAVIDDDGR 290
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAH 491
Y +G G+ +LG AN TP L + +L Q+ R VQI+ +
Sbjct: 291 AYGWGAGDHGALGTGGT--------ANAPTPVLADMEALDQLGIRPVQITSGQNF----- 337
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
+ L G+L A+G G GQLG
Sbjct: 338 SVVLGADGRLAAWGNGTGGQLG 359
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 159/301 (52%), Gaps = 21/301 (6%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ A+T+ G +Y++G ++++G LGHG+ W P+ + L+G+++
Sbjct: 339 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 398
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G T LI+ +G++Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 399 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 456
Query: 263 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
TA + + G+++T+ G+ RLGH + ++P + +L + + G+
Sbjct: 457 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 515
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ L SG +++ G + G+LG+ + D ++PRL+E+ +L V V GA+H
Sbjct: 516 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVVCGAYHV 570
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
AV+ Q G V TWG G G LGHG+ P V+AL D +A G T + +
Sbjct: 571 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKS 630
Query: 434 V 434
V
Sbjct: 631 V 631
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 151/337 (44%), Gaps = 33/337 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + A G L++ +V+ +G++ G +G GT + P+LVES
Sbjct: 277 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 334
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 335 LSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL- 393
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q++A C A S +Y+ G G G LGHG+R +P+ +E L L+ +
Sbjct: 394 --QVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVES--LKGLRTIS 449
Query: 366 VAAGAWHAAVVGQ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
V+ G WH A V + G++ TWG G LGHG+ + P V +L D
Sbjct: 450 VSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH 509
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
G T ++ G +++ G LG N DG+ P+LV E+
Sbjct: 510 KAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNNDGR--------YPRLV------EEK 554
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ + + H LT+SG++Y +G G G+LG
Sbjct: 555 LGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLG 591
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 288
Y + P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 266 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 323
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ +P L+ +L V IA G + A+ + + G G LGHGS
Sbjct: 324 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 381
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
P+ + L LQ V+ G WH A++ G++ T+G G +G LGHGN E S PK V+
Sbjct: 382 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 440
Query: 409 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 459
+L ++ I V+ G + T V E G ++++G G+ LGH G+R +
Sbjct: 441 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH-------GDR-S 492
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ L P V SL + + ++ + T LT SG ++ G+ GQLG
Sbjct: 493 SKLKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG 539
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 159/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + + A G L++ G+V+ +G++S G +GV K V P+LVE+
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV--GKNVVQPRLVEA 326
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + + A G F + ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 327 LISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQ 386
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
+ +A G + + S +++ G G G LGHG R + +PR +E LL L+ +
Sbjct: 387 IAFVACGPWHTALIT---STGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIA 441
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 442 VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYN 501
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V++ G LG ++++DG+ P LV K
Sbjct: 502 FHKIACGHSLTVGLTTSGRVFTMGSTVYGQLG-SSLSDGK--------VPCLVGD-KIAG 551
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E + +I+ Y H LT ++Y +G G G+LG
Sbjct: 552 ESIEEIAC--GAY---HVAVLTSKNEVYTWGKGANGRLG 585
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G +++G LGHG+ W P+ I L+G++I A G T
Sbjct: 338 GEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHT 397
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG +FG +G + + V+ P+ VESL + + A G + TA +
Sbjct: 398 ALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEV 455
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 456 IATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVSALIDYNFHKIACGHSLTVG 514
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V+++G + G+LG S +D K P L+ ++ +A GA+H AV+
Sbjct: 515 LTT--SGR-VFTMGSTVYGQLG-SSLSDGKVPCLVGD-KIAGESIEEIACGAYHVAVLTS 569
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 37/294 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P+ +ES + V A G ++++R+G V+T+ + RLGH N V+P L+ L
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPR-LVEAL 327
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 357
+ + +A G + A+ MA +Y+ G G+ G LGHGS P+ I
Sbjct: 328 ISTTIDFVACGEFHSCAVT-----MAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAG-P 381
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L LQ VA G WH A++ G++ T+G G +G LGHG+ + S P+ V++L ++ I
Sbjct: 382 LEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA 441
Query: 418 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
VA G + T V E G ++++G G+ LGH G++ A L P
Sbjct: 442 VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGH-------GDKEAR-LKPTC 493
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
V++L N +I+ +S+ T LT SG+++ G+ GQLG L + +
Sbjct: 494 VSALIDYN--FHKIACGHSL-----TVGLTTSGRVFTMGSTVYGQLGSSLSDGK 540
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG + PR + SL G+R I A G T +
Sbjct: 393 GPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAV 452
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARL--KPTCVSALIDYNFHKIACGHS 510
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ GRV+T +LG V P + + + +IA G ++ L
Sbjct: 511 LTVGLTTSGRVFTMGSTVYGQLGSSLSDGKV-PCLVGDKIAGESIEEIACGAYHVAVLT- 568
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 569 --SKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVK--YIACGSNYSAAI 619
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 23/307 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ G+N QLGH + RP PI LQ +IQ A G+
Sbjct: 40 QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRH 97
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M +++ GQ+ ++G + G+ + ++ P+++ L + VVQ A GN + L+
Sbjct: 98 SMALTEWGQILSWGDNDCGQVGHSTDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTS 156
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALA 320
G +Y SWG++ +LG + P D+ PH PL L T+ IP+ IA G + +L++
Sbjct: 157 CGELY--SWGSNIYGQLGVQS-PKDL-PHSNAPLRLTTILGIPLATIACGGNHSFLIS-- 210
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
AV+ G G+LG + +P ++ + L ++ V G ++ + +G
Sbjct: 211 ---KSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEG 265
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 439
V T G G YG LGHG E +P++V L VA G+ +T +V G VYSFG
Sbjct: 266 GVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGL 325
Query: 440 GESASLG 446
G S LG
Sbjct: 326 GASGQLG 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 32/363 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +G S GQLG G E E P I + Q A G T+ ++ GQVYA G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 224 DSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-- 280
+ + G +L T P + L+ V+Q A G+ + L+ G++ SWG++
Sbjct: 63 NDHHQL-----GHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQI--LSWGDNDC 115
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
++GH T+ + +E +L L + VVQIA G + LAL S +YS G + G+LG
Sbjct: 116 GQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---SCGELYSWGSNIYGQLG 172
Query: 341 HGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
S D H + +L + +A G H+ ++ + V WG G LG +E+
Sbjct: 173 VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ 232
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+ P ++++ + V GD + ++ +G V++ G G LGH G N
Sbjct: 233 NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGH-----GVSN--- 284
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVN 518
N + P++V L + + Q++ N HT AL S G++Y+FG G GQLG
Sbjct: 285 NEMIPRMVIEL--MGSTITQVACGNR-----HTLALVPSGGRVYSFGLGASGQLGTRNTI 337
Query: 519 NQT 521
+QT
Sbjct: 338 SQT 340
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G HS+A+T G + S+G N GQ+GH T + P+ +R L ++Q A G
Sbjct: 90 QIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNN 149
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFTA 264
++ ++ G++Y++G + +G+ GVQ K + +P + ++ I + A G +
Sbjct: 150 HSLALTSCGELYSWGSNIYGQL--GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSF 207
Query: 265 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
++S+ V F WG + +LG + E N P L ++ + V + G Y + L +
Sbjct: 208 LISKSSAV--FGWGKNTCGQLGLNDEQNRAYPSQ-LKSMRTLGVRFVTCGDEYSVFLTNE 264
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGR 381
V++ G G G+LGHG +E PR++ +L+ VA G H A+V GR
Sbjct: 265 G---GVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGR 319
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVV 407
V ++G G G LG N +++PKVV
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%)
Query: 132 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRP 188
+LRFL++ R Q G HS+A+TS G +YS+GSN GQLG + ++ P
Sbjct: 132 ILRFLVS------RTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAP 185
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+ ++ GI + A G + LIS + V+ +GK++ G+ G+ + P ++S+
Sbjct: 186 LRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL--GLNDEQNRAYPSQLKSM 243
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ + V G+ ++ L+ EG V+T GN +LGH N++ P ++ L + Q
Sbjct: 244 RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVI-ELMGSTITQ 302
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
+A G + LAL PSG VYS G G G+LG + + P+++
Sbjct: 303 VACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS ++ V+ +G N+ GQLG + P ++S++ + + G ++ +
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
++ G V+ G ++G+ +GV +++ P++V L + Q A GN T A++ GR
Sbjct: 262 TNEGGVFTCGAGNYGQLGHGVSNNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGR 319
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY+F G +LG + P ++G
Sbjct: 320 VYSFGLGASGQLGTRNTISQTLPKVVIG 347
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
MA+Y G G+LG G +E+ L Q + PV +A G H + +G+V
Sbjct: 1 MALYCWGDASHGQLGLGGIENEQ-ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G + LGH E P + L I +A G + ++E G + S+G +
Sbjct: 60 CGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
+GH+ D + P+++ L V+ VVQI+ N+ H+ ALT G+LY++
Sbjct: 118 VGHSTDNDV-------IELPKILRFL--VSRTVVQIACGNN-----HSLALTSCGELYSW 163
Query: 505 GAGDKGQLGIELVNNQTERGNPERV 529
G+ GQLG++ + P R+
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRL 188
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 172/356 (48%), Gaps = 35/356 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ ++GS GQLG GT EE+ + +L+ + +G+ ++ I D G ++ +G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK P V++L N+ + QAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHQPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 286 HTEP-NDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
EP D P+ + + V Q+AAG + + L + V++ G
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGH---VWT----WGQ 176
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G P ++ + + L +A GA+H + +DGR+ WG YG LG G+
Sbjct: 177 PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ S P VQ L+D+ + +A G + + +++ G+VY +G GE LG + D N
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG---LGD---ND 286
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ + PQ V L + E ++Q+S + H+ ALT G++++FG GD G+LG
Sbjct: 287 KSSKMVPQKVNLLAE--EDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 32/311 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
++G +S+A+ G ++++G N G LGH T+ E P +++L ++I QAA G
Sbjct: 44 VSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 318
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGHVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGA----FHN 208
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA + G + + G G+LG G HP ++ L L V +AAG WH+ +
Sbjct: 209 LALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTL--VDIAAGGWHSTALTD 265
Query: 379 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G V WG G +G LG G+ + S VP+ V L + I V+ G + ++ DG ++S
Sbjct: 266 KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 437 FGCGESASLGH 447
FG G+ LG+
Sbjct: 326 FGRGDHGRLGY 336
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 25/267 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPR------PIRSLQGIRII 200
+QA G H +AV +G Y++G N GQ G ++E RP P R + +
Sbjct: 94 TQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR 153
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 154 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVRLI--AVGA 205
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
F L +GR+ +WGN+ +LG P P+ G L+++ +V IAAG + A
Sbjct: 206 FHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTSHPVPVQG-LDDLTLVDIAAGGWHSTA 262
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 377
L + VY G G G+LG G D+ + ++ LL + ++ V+ G H+ +
Sbjct: 263 LTDKGE---VYGWGRGEHGRLGLGD-NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVP 404
+DGR+ ++G G +G LG+G + P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+ G + ++G+N GQLG G T+ P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAA 255
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++D G+VY +G+ G G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ WG G G LG G E + VV+AL V +G + + +DG ++++G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSIYWNAHTFALTES 498
+LGH Q T + + RV + +T + H A+ +
Sbjct: 67 RGTLGH-----------------QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
G+ YA+G + GQ G E + + E G P R DI
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140
>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1043
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 178/375 (47%), Gaps = 45/375 (12%)
Query: 160 VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ S G VY +G + G L GT +E PRP+ S + + Q G L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G+V+ +G++ G +G+Q ++ P+LVE L + A G + T V+S G +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 273 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
FSWG N LGH ++ + P + G LE + V+ +A G + ALA + +
Sbjct: 325 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 379
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA----VVGQDG---- 380
++ G G G LGHG+R +P+ ++ L L+ V VA WH A V+GQ G
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQ--SLNGLKTVKVACSIWHTAAIVEVMGQTGTSMS 437
Query: 381 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++ G
Sbjct: 438 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMG 497
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LG N+I+DG+ P LV + V E V +I+ + H LT
Sbjct: 498 GTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIACGDH-----HVAVLTSR 542
Query: 499 GKLYAFGAGDKGQLG 513
+++ +G G G+LG
Sbjct: 543 SEVFTWGKGANGRLG 557
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 147/340 (43%), Gaps = 69/340 (20%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q + G H VT +G V+++G G+LGHG + RP+ + L I A G
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYH 314
Query: 209 TMLISDAGQVYAFGKD-------------------------------------------- 224
T ++S +G ++++G
Sbjct: 315 TCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALAT 374
Query: 225 ------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG- 270
+FG+ +GV G + V+ P+ V+SL + V+ A + TA V+ + G
Sbjct: 375 ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGT 434
Query: 271 -----RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+++T+ G+ RLGH + + P + +L + +IA G+ + +AL SG
Sbjct: 435 SMSSRKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTVALTT--SG 491
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+++G G+LG+ S +D K P L+ Q +L+ +A G H AV+ V TW
Sbjct: 492 H-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGDHHVAVLTSRSEVFTW 548
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
G G G LGHG+ E + P V+AL D ++ G T
Sbjct: 549 GKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFT 588
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G + G+LG + + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLG--NLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
QIA C A S +++ G G G LGHG PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V++ G LG N +DG+ P LV K +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIAS 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+QI+ + H LT +++ +G G G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W PR I L+G++I + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G K ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + ++A G+ +
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLIDYDFYRVACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G + G+LG + + P L+E ++ + + +A G++H AV+
Sbjct: 314 LT---TSGKVWTMGNSVYGQLG--NLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLTS 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + A G F T ++ G +YT+ G N LGH T+ P + G LE +
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL- 184
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
QIA C A S +++ G G G LGHG PR +E L L+ +
Sbjct: 185 --QIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A +V Q G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V++ G LG N +DG+ P LV K +
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIAS 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+QI+ + H LT +++ +G G G+LG
Sbjct: 350 EHVLQIACG-----SYHVAVLTSRSEVFTWGKGANGRLG 383
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 34/389 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQAAAG 205
+Q G H++AVT +G V +G N GQ G G +E++ +PR ++SL ++ Q A G
Sbjct: 91 TQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACG 150
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTA 264
+ +M ++ G+++A+G +SFG+ G G L PQ + SL + + + A G + +
Sbjct: 151 SMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSF 210
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
LS G V+ + N +LG T + V P P L L+ V IA G Y L S
Sbjct: 211 ALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTP-LKNLKTKQVKYIACGQNYTAILTA--S 267
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVC 383
G ++ G G G+LGHGS ++E +PR ++ F L + VA G H V+ G+ GR
Sbjct: 268 G-GLFLFGQGSEGQLGHGSHSNEVNPRSVQGF--LGSEITQVACGRQHTLVLEGRTGRFF 324
Query: 384 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
+ G G G LG N+ +S VP +A + + + G+ + ++ G +++ G
Sbjct: 325 SLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEG--CSNGEESRSII---GSIFAGGD 379
Query: 440 GESASLGHNAIADGQGNRHANV--LTPQLVTS--LKQVNE-----------RVVQISLTN 484
+ D + + + P ++T L++V+E + ++++L++
Sbjct: 380 QSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSS 439
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLG 513
NA SG L+ FG G +GQLG
Sbjct: 440 PACLNASFLVGAGSGGLFLFGQGSEGQLG 468
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+ + G V G+N GQLG E P + + + I Q + G T+ ++D
Sbjct: 49 HTCVLLRDGTVMMCGANDRGQLGQDRPGSELAHVP--ATETLVITQVSCGNDHTLAVTDR 106
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
GQV +G++ G+ ++ P+ ++SL + V Q A G+ + L+R+GR+ F
Sbjct: 107 GQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRI--F 164
Query: 276 SWGNDA--RLGHHTEPNDV-EPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+WG+++ +LG + HP L +L +P+ ++A G + AL+ SG AV+
Sbjct: 165 AWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSV--SG-AVFGW 221
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ D P ++ + ++ +A G + A++ G + +G G G
Sbjct: 222 GKNNCGQLGLGTTEDRVSPTPLKNLKTKQVK--YIACGQNYTAILTASGGLFLFGQGSEG 279
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLG 446
LGHG+ E P+ VQ + VA G T V+ G +S G G LG
Sbjct: 280 QLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLG 335
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 157/359 (43%), Gaps = 33/359 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
V+S+G GQLG ++ PR + +L G +I + + G T ++ G V
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
G + G+ G++L P + + + + Q + GN T ++ G+V WG +
Sbjct: 63 GANDRGQLGQDRPGSELAHVP----ATETLVITQVSCGNDHTLAVTDRGQV--LGWGRND 116
Query: 282 R--LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
R G T ++ + P L +L + V Q+A G + +AL +++ G G+
Sbjct: 117 RGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALT---RDGRIFAWGDNSFGQ 173
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
LG G+ + +Q L P+ +A G WH+ + G V WG G LG G
Sbjct: 174 LGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGT 233
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
E P ++ L + ++A G T +++ G ++ FG G LGH +
Sbjct: 234 TEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGS-------- 285
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIE 515
H+N + P+ V + + Q++ HT L +G+ ++ G G KGQLG++
Sbjct: 286 HSNEVNPRSVQGF--LGSEITQVACGRQ-----HTLVLEGRTGRFFSLGQGSKGQLGLD 337
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G ++ +T+ G ++ FG S GQLGHG+ E PR ++ G I Q A G T+++
Sbjct: 257 GQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316
Query: 213 S-DAGQVYAFGKDSFGEAEYGVQGTKLVTSP--------QLVESLKNIFVVQAAIGNFFT 263
G+ ++ G+ S G+ +K SP E N ++ IG+ F
Sbjct: 317 EGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFA 376
Query: 264 AVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTL-----ENIPVVQIAAGYCYL 316
+ S GND L +EP L L E+ P+++ + L
Sbjct: 377 G---GDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTL 433
Query: 317 -LALACQPSGMAVYSVGCGLGG----------KLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
+AL+ A + VG G GG +LGHGS ++E +PR ++ F L +
Sbjct: 434 EMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDF--LGNEITQ 491
Query: 366 VAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
VA G H V+ G+ G + G G G LG N +S +V
Sbjct: 492 VACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLV 534
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
M+V+S GC G+LG D+ PR E L Q ++ G H V+ +DG
Sbjct: 1 MSVFSWGCTQDGQLGISGLGDDVPSLSSPR--EVPALAGKQIREISCGLRHTCVLLRDGT 58
Query: 382 VCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V G G LG E VP A + V+ G+ T V++ G V +G
Sbjct: 59 VMMCGANDRGQLGQDRPGSELAHVP----ATETLVITQVSCGNDHTLAVTDRGQVLGWGR 114
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ G + D + R P+ + SL +V Q++ + H+ ALT G
Sbjct: 115 NDRGQCGL-STGDSEDKRK-----PRFLKSLSSC--QVAQVACGS-----MHSMALTRDG 161
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+++A+G GQLGI R +P+++
Sbjct: 162 RIFAWGDNSFGQLGIGAPGRTLYRDHPQQL 191
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 132 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 191
L L+ AC N+ + G G G ++ FG S GQLGHG+ E PR +
Sbjct: 432 TLEMALSSPACL---NASFLVGAG-------SGGLFLFGQGSEGQLGHGSHSNEVNPRSV 481
Query: 192 RSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGE 228
+ G I Q A G T+++ G Y+ G+ S G+
Sbjct: 482 KDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQ 519
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 172/351 (49%), Gaps = 26/351 (7%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E + + G + + + GVV S G S G+LG G +++ R I +LQG + Q A
Sbjct: 781 EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATS 840
Query: 206 A---GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
G + +++ G+V+++G +G+ +G + P+ +E+L+ VVQ A G
Sbjct: 841 TGSDGHAIALTENGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALRGQEVVQVACGFKH 898
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+AV++ +G+++TF +G+ RLGH + N P ++ LEN + Q+A G + + ++
Sbjct: 899 SAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVS-- 955
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ V++ G G GKLG G + + P IE + ++ ++ GA A + DG++
Sbjct: 956 QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKK--ISCGAQFTAALTWDGKL 1013
Query: 383 CTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+G R C GN E + P+VV AL+ I ++ G T ++ G VY++G
Sbjct: 1014 FMFGQDRM-C---GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWG 1069
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
LG G N +V P LV SL N R + T+S W+
Sbjct: 1070 SNTDGQLGL-----GHTN---HVQEPTLVESLSGKNIRQISAGRTHSAAWS 1112
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 159/369 (43%), Gaps = 46/369 (12%)
Query: 166 VYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
VY FG+ GQL G G P+ +S R + G T +I++ G V + G
Sbjct: 752 VYLFGAGRHGQLAEVGSGVL----VPQLTKSFHEAR--KVVCGQNCTFIINNNGVVLSCG 805
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGN 279
+ S+G G + + +L+ V Q A + L+ G V+++ G+
Sbjct: 806 EGSYGRLGQG--NSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGD 863
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LGH P + L VVQ+A G+ + + +++ G G G+L
Sbjct: 864 YGKLGHGNSDRQRRPRQI-EALRGQEVVQVACGFKHSAVVTIDGK---LFTFGYGDYGRL 919
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW--GWGRYGCLGHGN 397
GHGS T++K P + L N VA G H +V QD + W G G YG LG G
Sbjct: 920 GHGSTTNKKIPERV--MALENYIIGQVACGLNHTVIVSQDN-LTVWACGDGDYGKLGIGG 976
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG----CGESASLGHNAIADG 453
++ P ++ L+ V ++ G T ++ DG ++ FG CG +
Sbjct: 977 TSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCET--------- 1027
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
R + PQ+VT+L + ++ IS+ HT ALT G +Y +G+ GQLG
Sbjct: 1028 ---RTSPSFNPQVVTALS--SHHIIDISVGAE-----HTIALTSKGIVYTWGSNTDGQLG 1077
Query: 514 IELVNNQTE 522
+ N+ E
Sbjct: 1078 LGHTNHVQE 1086
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 11/237 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA +E Q G HS VT G +++FG G+LGHG+T + P + +L+ I
Sbjct: 882 EALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYII 941
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+++S D V+A G +G + G+ GT TSP +E L + + + +
Sbjct: 942 GQVACGLNHTVIVSQDNLTVWACGDGDYG--KLGIGGTSAKTSPTKIEVLSRVGIKKISC 999
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLL 317
G FTA L+ +G+++ F G D G+ +P + T L + ++ I+ G + +
Sbjct: 1000 GAQFTAALTWDGKLFMF--GQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTI 1057
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
AL S VY+ G G+LG G + P L+E N++ ++AG H+A
Sbjct: 1058 ALT---SKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQ--ISAGRTHSA 1109
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 385
V S G G G+LG G+ D I Q ++ + + G+ HA + ++G V +W
Sbjct: 800 VVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSW 859
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G YG LGHGN + + P+ ++AL + + VA G + VV+ DG +++FG G+ L
Sbjct: 860 GDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRL 919
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESG- 499
GH + T+ K++ ERV ++L N I HT +++
Sbjct: 920 GHGS------------------TTNKKIPERV--MALENYIIGQVACGLNHTVIVSQDNL 959
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
++A G GD G+LGI + + +P ++++
Sbjct: 960 TVWACGDGDYGKLGI---GGTSAKTSPTKIEV 988
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 149 QAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H++ V+ + V++ G G+LG G T + P I L + I + + GA
Sbjct: 943 QVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQ 1002
Query: 208 RTMLISDAGQVYAFGKDSF-GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T ++ G+++ FG+D G E T +PQ+V +L + ++ ++G T L
Sbjct: 1003 FTAALTWDGKLFMFGQDRMCGNCE---TRTSPSFNPQVVTALSSHHIIDISVGAEHTIAL 1059
Query: 267 SREGRVYTFSWGNDARLG-----HHTEPNDVEP--------------------------- 294
+ +G VYT+ D +LG H EP VE
Sbjct: 1060 TSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCEHDDAG 1119
Query: 295 HPLLGTLENIP 305
H LLGT E+IP
Sbjct: 1120 HTLLGTPESIP 1130
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + ++Q A G L++ G+++ +G++S G +GV K V P+LVE+
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGV--GKNVIQPRLVEA 327
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
+ + V A G F T ++ G +YT+ G N LGH T+ + P + G LE +
Sbjct: 328 MASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL- 386
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q+A C A S +++ G G G LGHG R + +PR +E L L+ +
Sbjct: 387 --QVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVES--LSGLRTIA 442
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + ++ TWG G LGHG+++ P V L D
Sbjct: 443 VACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSN 502
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G+V++ G LG N +DG+ P LV K
Sbjct: 503 FHRIACGHSLTVGLTTSGEVFTMGSSVYGQLG-NPQSDGK--------VPCLVKD-KLAG 552
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +I+ Y H LT ++Y +G G G+LG
Sbjct: 553 ESVEEIAC--GAY---HVAVLTSKNEVYTWGKGANGRLG 586
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 339 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT 398
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG +FG +G + V+ P+ VESL + + A G + TA +
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRTIAVACGVWHTAAVVEV 456
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+++T+ G+ RLGH + +EP + L + +IA G+ +
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEP-TCVSLLIDSNFHRIACGHSLTVG 515
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G + G+LG+ ++D K P L++ +L +A GA+H AV+
Sbjct: 516 LT---TSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEIACGAYHVAVLTS 570
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 571 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 613
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E PR + SL G+R I A G T +
Sbjct: 394 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAV 453
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ + +++ +G +G + +L P V L + + A G+
Sbjct: 454 VEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL--EPTCVSLLIDSNFHRIACGHS 511
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ G V+T +LG+ V P + L V +IA G ++ L
Sbjct: 512 LTVGLTTSGEVFTMGSSVYGQLGNPQSDGKV-PCLVKDKLAGESVEEIACGAYHVAVLT- 569
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 570 --SKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK--YIACGSNYSAAI 620
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 211
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 266
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 485
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
G+++T+ G+ RLGH + + P + L Q+A G+ +AL
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAALVEPNFCQVACGHSLTVAL 544
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG VY++G + G+LG+ S D K P +E +L +A GA+H AV+
Sbjct: 545 TT--SGH-VYTMGSPVYGQLGN-SHADGKLPNRVEG-KLHKSFVEEIACGAYHVAVLTSR 599
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 157/356 (44%), Gaps = 39/356 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+ +++G++S G +GV + P+L+++
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDA 356
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + A G F + ++ G +YT+ G+ LGH E + P + LE I V
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + S +++ G G G LGHG + PR ++ L L+ V A
Sbjct: 417 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAA 471
Query: 368 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
G WH A V + G++ TWG G G LGHGN+E + VP V AL +
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF 531
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T ++ G VY+ G LG N HA+ P V E
Sbjct: 532 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NSHADGKLPNRV-------E 575
Query: 476 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ S I A H LT ++Y +G G G+LG V+ +R +P V+
Sbjct: 576 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD---DRNSPTLVE 628
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 29/363 (7%)
Query: 123 QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
++ G S+ + + LL A E+ + G H++ VT +G +S+G S G+LGHG
Sbjct: 284 RRVGSSFDMKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 343
Query: 181 TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
+P+ I +L I A G + ++ +G +Y +GK FG +G + + V
Sbjct: 344 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 402
Query: 241 SPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P+ V L+ I V A G + TAV++ G+++TF G LGH + + P +
Sbjct: 403 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE-VD 460
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 350
+L+ + V+ A G + A+ G +++ G G G+LGHG+ K P
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEP 516
Query: 351 RLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
+L+ ++P H+ V G V T G YG LG+ + + + +V
Sbjct: 517 KLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEG 576
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L+ +A G Y V++ +VY++G G + LGH + D +P LV
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVE 628
Query: 469 SLK 471
SLK
Sbjct: 629 SLK 631
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 40/306 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G +++++G +FSWG ++ RLGH + N +P L+
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LID 355
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ SG +Y+ G G G LGHG+ P+ + F L
Sbjct: 356 ALNTTNIELVACGEFHSCAVTL--SG-DLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLE 411
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ +A G +H AVV G++ T+G G +G LGHG+++ +P+ V +L ++ + A
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAA 471
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH GN+ L P V
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCV 523
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N+ + P
Sbjct: 524 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NSHADGKLPN 572
Query: 528 RVDIDL 533
RV+ L
Sbjct: 573 RVEGKL 578
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 31/258 (12%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G G +G + KLV P V +L Q
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 533
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTE---PNDVEPHPLLGTLENIPVVQIAA 311
A G+ T L+ G VYT +LG+ H + PN VE G L V +IA
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVE-----GKLHKSFVEEIAC 588
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----V 366
G ++ L S VY+ G G G+LGHG D P L+E + ++ +
Sbjct: 589 GAYHVAVLT---SRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFT 645
Query: 367 AAGAWHAAVVGQDGRVCT 384
AA H G D +C+
Sbjct: 646 AAVCIHRWASGMDQSMCS 663
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PK++ ALN VA G++ + V+ GD+Y++G G+ LGH GN ++ +
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 403
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K+VN + I +++ HT +T +G+L+ FG G G LG
Sbjct: 404 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 148/283 (52%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L+G ++ + G T
Sbjct: 152 GEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHT 211
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ GQ++ FG +FG +G + + + P+ VESL + + A G + TA +
Sbjct: 212 ALITSTGQLFTFGDGTFGVLGHGNRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEV 269
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + V+P + +L + +IA G+ +
Sbjct: 270 IVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKP-TCVASLIDYDFHRIACGHSLTVG 328
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V+ +G + G+LG+ R+D K P L+E N+ V VA G++H AV+
Sbjct: 329 LTT--SGQ-VWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENV--VQVACGSYHVAVLTV 382
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E +P +V+ L D H+A G
Sbjct: 383 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACG 425
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 151/339 (44%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G++S G +G + + P LVES
Sbjct: 83 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSLVES 140
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH T+ + P + G LE
Sbjct: 141 LAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQ 200
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + + S +++ G G G LGHG+R PR +E L L+ +
Sbjct: 201 VAYVSCGTWHTALIT---STGQLFTFGDGTFGVLGHGNRESIPCPREVE--SLSGLKTIA 255
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V +L D
Sbjct: 256 VACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYD 315
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V+ G N + GN ++ P LV + +
Sbjct: 316 FHRIACGHSLTVGLTTSGQVWGMG---------NTVYGQLGNPRSDGKLPCLVEDI--MG 364
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E VVQ++ + H LT +++ +G G G+LG
Sbjct: 365 ENVVQVACG-----SYHVAVLTVKSEVFTWGKGANGRLG 398
>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 177/376 (47%), Gaps = 47/376 (12%)
Query: 160 VTSKGVVYSFG---SNSSGQLGHGT----TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ S G VY +G +++ G+GT T + P+P+ S + + Q A+G L+
Sbjct: 220 IESLGDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G+V+ +G++S G +G+ K PQLVE L V A G T +S +
Sbjct: 280 TRQGEVFTWGEESGGRLGHGID--KDFGRPQLVEFLAVTNVESVACGENHTCAVSISDEL 337
Query: 273 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
FSWG N LGH T+ + P + G LE + V+ IA G + ALA S +
Sbjct: 338 --FSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACG-TWHSALAT--SNGKL 392
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 380
++ G G G LGHG+R +P+ + QLL+ L+ + VA G WH A V Q G
Sbjct: 393 FTFGDGTFGVLGHGNRESVAYPK---EVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNV 449
Query: 381 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
++ TWG G LGHGN+E P V L + +A G T ++ G +++
Sbjct: 450 SSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTM 509
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G E LG N+++DG+ P LV V E V +IS H ALT
Sbjct: 510 GGTEFGQLG-NSLSDGK--------IPILVQD-ALVGEFVEEISCGAH-----HVAALTS 554
Query: 498 SGKLYAFGAGDKGQLG 513
+LY +G G G+LG
Sbjct: 555 RSELYTWGKGANGRLG 570
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 41/328 (12%)
Query: 212 ISDAGQVYAFGK---DSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
I G VY +G+ D+ G Q T V P+ +ES + V Q A G A++
Sbjct: 220 IESLGDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS-- 324
+R+G V+T+ + RLGH + + P L+ L V +A G + A++
Sbjct: 280 TRQGEVFTWGEESGGRLGHGIDKDFGRPQ-LVEFLAVTNVESVACGENHTCAVSISDELF 338
Query: 325 --GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
G Y+VG LGHG+ P+ I L LQ + +A G WH+A+ +G++
Sbjct: 339 SWGDGKYNVGL-----LGHGTDVSHWVPKRING-PLEGLQVISIACGTWHSALATSNGKL 392
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DG 432
T+G G +G LGHGN E + PK VQ L+ +K I VA G + T + E
Sbjct: 393 FTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNVSSR 452
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++++G G+ LGH GN+ L P V++L + N QI+ +++ T
Sbjct: 453 KLFTWGDGDKYRLGH-------GNKET-YLQPTCVSTLIEYN--FHQIACGHTM-----T 497
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQ 520
ALT SG L+ G + GQLG L + +
Sbjct: 498 IALTTSGHLFTMGGTEFGQLGNSLSDGK 525
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 22/296 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N +++A G H+ AV+ ++S+G + G LGHGT W P+ I L+G+++I
Sbjct: 317 NVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISI 376
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G + L + G+++ FG +FG +G + + V P+ V+ L + + A G +
Sbjct: 377 ACGTWHSALATSNGKLFTFGDGTFGVLGHGNRES--VAYPKEVQLLSGLKTITVACGVWH 434
Query: 263 TAVLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
TA + +++T+ G+ RLGH + ++P + TL QIA G
Sbjct: 435 TAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQP-TCVSTLIEYNFHQIACG 493
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ +AL SG ++++G G+LG+ S +D K P L+ Q L+ ++ GA H
Sbjct: 494 HTMTIALTT--SGH-LFTMGGTEFGQLGN-SLSDGKIPILV-QDALVGEFVEEISCGAHH 548
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + + TWG G G LGHG+ + P +V+AL + +++ G T +
Sbjct: 549 VAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFTSCI 604
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 25/335 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q +G H VT +G V+++G S G+LGHG ++ RP+ + L + A G
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENH 327
Query: 209 TMLISDAGQVYAF--GKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAV 265
T +S + +++++ GK + G +G + V P+ + L+ + V+ A G + +A+
Sbjct: 328 TCAVSISDELFSWGDGKYNVGLLGHGTDVSHWV--PKRINGPLEGLQVISIACGTWHSAL 385
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA----- 320
+ G+++TF G LGH + P + L + + +A G + A+
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGNRESVAYPKE-VQLLSGLKTITVACGVWHTAAIVEVTFQ 444
Query: 321 --CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
S +++ G G +LGHG++ P + N +A G +
Sbjct: 445 SGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQ--IACGHTMTIALTT 502
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G + T G +G LG+ + + +P +VQ AL ++ G + ++ ++Y++
Sbjct: 503 SGHLFTMGGTEFGQLGNSLSDGK-IPILVQDALVGEFVEEISCGAHHVAALTSRSELYTW 561
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
G G + LGH I D + +P LV +LK+
Sbjct: 562 GKGANGRLGHGDIDDRK--------SPTLVEALKE 588
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 168/362 (46%), Gaps = 38/362 (10%)
Query: 166 VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V FG++ + +G+ G+ + P+P+ S + + A G L+S G+V+ +G+
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEA 299
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDAR 282
S G +G+ K VT PQL+ESL + A G F T ++ G +YT+ G N
Sbjct: 300 SGGRLGHGM--GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGL 357
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH T+ + P + G LE + QIA+ C A S +++ G G G LGHG
Sbjct: 358 LGHGTDVSHWIPKRISGPLEGL---QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYG 391
+ +PR +E L L+ + VA G WHAA + + G++ TWG G
Sbjct: 415 DKETVFYPREVES--LSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHG++E P V AL D VA G T ++ G VY+ G LG N A
Sbjct: 473 RLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG-NPNA 531
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
DG+ P LV K + V +I+ Y H LT +++ +G G G+
Sbjct: 532 DGK--------LPCLVED-KLTKDCVEEIAC--GAY---HVAVLTSRNEVFTWGKGANGR 577
Query: 512 LG 513
LG
Sbjct: 578 LG 579
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 146/290 (50%), Gaps = 22/290 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G++I + G T
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 391
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ GQ++ FG +FG +G + T V P+ VESL + + A G + A +
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 449
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ +RLGH + ++P + +++ ++A G+ +
Sbjct: 450 IVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT-FHRVACGHSLTVG 508
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + VY++G + G+LG+ D K P L+E +L +A GA+H AV+
Sbjct: 509 LT---TSGKVYTMGSTVYGQLGN-PNADGKLPCLVED-KLTKDCVEEIACGAYHVAVLTS 563
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ E P +V AL + ++A G T +
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 41/319 (12%)
Query: 216 GQVYAFGK------DSFG-EAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
G VY +G+ FG + G G++ V P+ +ES + V A G A++S
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVS 288
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
R+G V+T+ + RLGH DV L+ +L + +A G + A+
Sbjct: 289 RQGEVFTWGEASGGRLGHGM-GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGE--- 344
Query: 328 VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+Y+ G G G LGHG+ P+ I L LQ V+ G WH A++ G++ T+
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTGQLFTF 403
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDV 434
G G +G LGHG++E P+ V++L+ ++ I VA G + + E G +
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKL 463
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+++G G+ + LGH G++ L P V++L ++ +++ +S+ T
Sbjct: 464 FTWGDGDKSRLGH-------GDKEPR-LKPTCVSAL--IDHTFHRVACGHSL-----TVG 508
Query: 495 LTESGKLYAFGAGDKGQLG 513
LT SGK+Y G+ GQLG
Sbjct: 509 LTTSGKVYTMGSTVYGQLG 527
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 33/275 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E + PR + SL G+R I A G I
Sbjct: 387 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 213 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ G+++ +G +G + +L P V +L + + A G+
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRL--KPTCVSALIDHTFHRVACGHS 504
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLAL 319
T L+ G+VYT +LG+ PN P L L V +IA G ++ L
Sbjct: 505 LTVGLTTSGKVYTMGSTVYGQLGN---PNADGKLPCLVEDKLTKDCVEEIACGAYHVAVL 561
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAA 374
S V++ G G G+LGHG D K P L++ + +++ + AA H
Sbjct: 562 T---SRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKW 618
Query: 375 VVGQDGRVCT-------WGWGRYGCLGHGNEECES 402
V G + C+ + R+ C G C S
Sbjct: 619 VSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 653
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 34/338 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G L + G+V+A+G++ G +G ++ P+LVE+
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEA 291
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH + P + G LE +
Sbjct: 292 LAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQ 351
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ ++ G + A S V++ G G G LGHG+R +P+ +E L + +
Sbjct: 352 VLSVSCGSWHS---ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVET--LSGFRTIK 406
Query: 366 VAAGAWHAAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
VA G WH+A + Q G ++ TWG G LGHG+++ VP VQ+L D
Sbjct: 407 VACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNF 466
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T +S G V++ G + LG N +DG +H + +L L
Sbjct: 467 HQVACGHSMTIALSTSGHVFTMGSSSNGQLG-NPKSDG---KHPTPVQDRLAGEL----- 517
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +IS + H LT ++Y +G G G+LG
Sbjct: 518 -VEEISCG-----SCHVAVLTSRSEVYTWGMGANGRLG 549
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 151/291 (51%), Gaps = 26/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ A+T+ G +Y++G ++G LGHG W P+ + L+G++++ + G+ +
Sbjct: 303 GEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHS 362
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
L + +G+V+ FG +FG +G + T V P+ VE+L ++ A G + +A
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHT--VAYPKEVETLSGFRTIKVACGLWHSAAIVET 420
Query: 265 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
V+SR +++T+ G+ LGH + + P + +L + Q+A G+ +
Sbjct: 421 TNQAGVNVISR--KLFTWGAGDKNPLGHGDKDARLVP-TCVQSLIDYNFHQVACGHSMTI 477
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL+ + V+++G G+LG+ ++D KHP + Q +L ++ G+ H AV+
Sbjct: 478 ALS---TSGHVFTMGSSSNGQLGN-PKSDGKHPTPV-QDRLAGELVEEISCGSCHVAVLT 532
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG E + P +V+AL D +A G ++TT +
Sbjct: 533 SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 583
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 43/322 (13%)
Query: 212 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
I G VY +G+ + G A Y ++ P+ +ES + V Q A G A+
Sbjct: 199 IESLGDVYVWGEVWTDMIPAEGSANYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 257
Query: 266 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+R+G V F+WG + RLGH T+ + P L+ L V +A G + A+
Sbjct: 258 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYVACGEFHTCAITASG 314
Query: 324 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+Y+ G G G LGHG+ T P+ + L +Q + V+ G+WH+A+ G+
Sbjct: 315 D---LYTWGDGYYNAGLLGHGAGTSHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSSGK 370
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------- 433
V T+G G +G LGHGN + PK V+ L+ + I VA G + + + E +
Sbjct: 371 VFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVIS 430
Query: 434 --VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
++++G G+ LGH G++ A L P V SL N Q++ +S+
Sbjct: 431 RKLFTWGAGDKNPLGH-------GDKDAR-LVPTCVQSLIDYN--FHQVACGHSM----- 475
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T AL+ SG ++ G+ GQLG
Sbjct: 476 TIALSTSGHVFTMGSSSNGQLG 497
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 141/336 (41%), Gaps = 29/336 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H T +G V+++G G+LGHGT + RP+ + +L + A G
Sbjct: 247 QIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFH 306
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T I+ +G +Y +G + G GT ++ L+ + V+ + G++ +A+ +
Sbjct: 307 TCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTT 366
Query: 268 REGRVYTFSWGNDARLGH---HT--EPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--A 320
G+V+TF G LGH HT P +VE TL +++A G + A+
Sbjct: 367 SSGKVFTFGDGTFGALGHGNRHTVAYPKEVE------TLSGFRTIKVACGLWHSAAIVET 420
Query: 321 CQPSGMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+G+ V ++ G G LGHG + P ++ N VA G
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQ--VACGHSMTIA 478
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ G V T G G LG+ + + V L ++ G V++ +VY
Sbjct: 479 LSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVY 538
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
++G G + LGH + D + P LV +LK
Sbjct: 539 TWGMGANGRLGHGGVEDKK--------KPTLVEALK 566
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 177/349 (50%), Gaps = 33/349 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
V+ +G ++ GQL G +EE P+ + LQ + I + + G T++++ G++Y+ G
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 224 DSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
+ +GE + ++ V+ +LV SL ++ V+QAA G+ F+ V++ G V FSWG +
Sbjct: 64 NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEV--FSWGRND 121
Query: 282 R--LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+ LG + E P L+ +L VVQI G + LAL ++S GC G+
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALT---DDGRLFSWGCNKYGQ 178
Query: 339 LGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
LG GS + P +Q L P+ +A+G H+ ++ V WG +G LG
Sbjct: 179 LGLGSSHSFHDTP---QQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLN 235
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+E +S P + ++L + K ++++ G+ T ++++G V+SFG G LGHN+
Sbjct: 236 DEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNST------ 289
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAF 504
N + P+ V L + + Q++ HT A + SGK+YAF
Sbjct: 290 --QNEILPKRVMEL--MGSVISQVACGRR-----HTVAFSPSSGKMYAF 329
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 149/302 (49%), Gaps = 34/302 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP----------IRSLQGIRIIQA 202
G H++ VT G +YS GSN G+LGH +PR + SL +++IQA
Sbjct: 45 GEKHTLIVTKDGKLYSCGSNEYGELGHS------KPRSRAVSIDVVELVSSLSSMQVIQA 98
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G+ +++I+ AG+V+++G++ G+ G + P+L++SL VVQ G
Sbjct: 99 AGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANH 158
Query: 263 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYL 316
L+ +GR+ FSWG + LG +D P ++ L IP+ QIA+G + ++
Sbjct: 159 CLALTDDGRL--FSWGCNKYGQLGLGSSHSFHDT-PQQIV-CLRGIPIAQIASGGNHSFI 214
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
L + AV+ G G+LG D+ HP L + L N + + ++ G H +
Sbjct: 215 LTWS-----RAVFGWGKNSFGQLGLNDEYDKSHPTLCK--SLRNQKVMYISCGEDHTVAL 267
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVY 435
++G V ++G G +G LGH + + E +PK V L VA G T S G +Y
Sbjct: 268 TKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMY 327
Query: 436 SF 437
+F
Sbjct: 328 AF 329
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 29/318 (9%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V+ +G+ + G+ G + SP+ V L+ + + + + G T +++++G++Y+
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 278 GNDARLGH---HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
LGH + ++ L+ +L ++ V+Q A G + L + + V+S G
Sbjct: 64 NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVIT---TAGEVFSWGRN 120
Query: 335 LGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G S+ +E+ P+L++ + + V + GA H + DGR+ +WG +YG
Sbjct: 121 DKGQLGRGKLSKEEERKPKLMKSLAVCTV--VQITCGANHCLALTDDGRLFSWGCNKYGQ 178
Query: 393 LGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ P+ + L + +A+G +F+++ V+ +G LG N
Sbjct: 179 LGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLN--- 235
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
D H P L SL+ N++V+ IS HT ALT+ G +++FGAG GQ
Sbjct: 236 DEYDKSH-----PTLCKSLR--NQKVMYISCGED-----HTVALTKEGGVFSFGAGGFGQ 283
Query: 512 LGIELVNNQTERGNPERV 529
LG N+ P+RV
Sbjct: 284 LGHNSTQNEIL---PKRV 298
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 13/230 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 206
QA G S+ +T+ G V+S+G N GQLG G + EEE +P+ ++SL ++Q GA
Sbjct: 97 QAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGA 156
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++D G+++++G + +G+ G + +PQ + L+ I + Q A G + +L
Sbjct: 157 NHCLALTDDGRLFSWGCNKYGQLGLGSSHS-FHDTPQQIVCLRGIPIAQIASGGNHSFIL 215
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ V F WG ++ +LG + E + P L +L N V+ I+ G + +AL +
Sbjct: 216 TWSRAV--FGWGKNSFGQLGLNDEYDKSHP-TLCKSLRNQKVMYISCGEDHTVALTKEG- 271
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
V+S G G G+LGH S +E P+ + +L+ VA G H
Sbjct: 272 --GVFSFGAGGFGQLGHNSTQNEILPKRV--MELMGSVISQVACGRRHTV 317
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 143 CRRENSQAIA----GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 198
C+ +Q + G H++A+T +G V+SFG+ GQLGH +T+ E P+ + L G
Sbjct: 246 CKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSV 305
Query: 199 IIQAAAGAGRTMLIS-DAGQVYAF 221
I Q A G T+ S +G++YAF
Sbjct: 306 ISQVACGRRHTVAFSPSSGKMYAF 329
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q +G HS +T V+ +G NS GQLG ++ P +SL+ +++ + G
Sbjct: 203 AQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGED 262
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ ++ G V++FG FG+ G T+ P+ V L + Q A G T S
Sbjct: 263 HTVALTKEGGVFSFGAGGFGQL--GHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFS 320
Query: 268 -REGRVYTF 275
G++Y F
Sbjct: 321 PSSGKMYAF 329
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 155/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + I A G L++ G+V+ +G++S G +GV K V P++VES
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--VKDVIQPRMVES 329
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + A G F T ++ G +YT+ G N LGH ++ + P + G LE +
Sbjct: 330 LAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQ 389
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V + G + A S +++ G G G LGHG R + +P+ +E L L+ +
Sbjct: 390 VTSVTCGPWH---TALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVE--SLSGLRTIA 444
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 445 VACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYD 504
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V+S G LG N ADG+ P LV K
Sbjct: 505 FHKVACGHSITVGLTTSGQVFSMGSTVYGQLG-NPSADGK--------IPCLVED-KLFG 554
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V ++S Y H LT ++Y +G G G+LG
Sbjct: 555 ESVEEVSC--GAY---HVVVLTSKNEVYTWGKGANGRLG 588
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 23/290 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHG+ W P+ + L+G+++ G T
Sbjct: 341 GEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHT 400
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ GQ++ FG +FG +G + ++ P+ VESL + + A G + TA +
Sbjct: 401 ALVTSMGQLFTFGDGTFGALGHGDREN--ISYPKEVESLSGLRTIAVACGVWHTAAVVEV 458
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + ++A G+ +
Sbjct: 459 IVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYDFHKVACGHSITVG 517
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V+S+G + G+LG+ S D K P L+E +L V+ GA+H V+
Sbjct: 518 LTT--SGQ-VFSMGSTVYGQLGNPS-ADGKIPCLVED-KLFGESVEEVSCGAYHVVVLTS 572
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E P +V+AL D ++A G +YT +
Sbjct: 573 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAI 622
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 138/286 (48%), Gaps = 29/286 (10%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + + A G A+++R+G V+T+ + RLGH + ++P ++
Sbjct: 269 VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPR-MV 327
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
+L + +A G + A+ + + G G LGHGS P+ + L
Sbjct: 328 ESLAASSIGFVACGEFHTCAVTITGE-LYTWGDGTHNAGLLGHGSDVSHWIPKRVSG-PL 385
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
LQ V G WH A+V G++ T+G G +G LGHG+ E S PK V++L+ ++ I V
Sbjct: 386 EGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAV 445
Query: 419 ATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
A G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 446 ACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGH-------GDKEPR-LKPTCV 497
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+L ++ +++ +SI T LT SG++++ G+ GQLG
Sbjct: 498 PAL--IDYDFHKVACGHSI-----TVGLTTSGQVFSMGSTVYGQLG 536
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 11/308 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAG 205
Q ++G +TS GVV + G N SGQ GHG +E RPI++L+ R+ I A+ G
Sbjct: 385 QVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNG 444
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ I+D G Y++G + G+ + GTKL P+L+ES+K + AA+ +A+
Sbjct: 445 CEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL-PKLIESIKEKKMKSAAVSYHHSAL 503
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+S G +YTF + +LG + P L+ L V ++ G +++ C SG
Sbjct: 504 VSVSGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKALLGHHVSMVSCGLYHMVL--CTISG 560
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G+LG G K P Q L N VA G +HA + G ++
Sbjct: 561 -EVFTCGKNDHGQLGLGHNKQVKVP---TQVVLPNELVCFVACGYYHATAITSTGLTYSF 616
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LG G++ +++P + ++ + +H A G Y T ++S+ G V+ FG L
Sbjct: 617 GRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQL 676
Query: 446 GHNAIADG 453
G+ D
Sbjct: 677 GNRGNTDS 684
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 17/310 (5%)
Query: 149 QAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 206
Q+IAG + V K G V++ G N SGQ G G +E P PI +L GI I AA
Sbjct: 3169 QSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASN 3228
Query: 207 G--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFT 263
G + IS G VY++G + G+ G +K T P+++ESL+ F+ AA+ +
Sbjct: 3229 GCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHT-PRVIESLREKYFITFAAVSYHHS 3287
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
AV+S G + TF + +LG + P L+ TL + V ++A G + +A+
Sbjct: 3288 AVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQ-LVETLSSQKVGRVACGLYHTVAIV--- 3343
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNL--QPVVVAAGAWHAAVV 376
VYS G G+LG + K P L++ + +L+ + V V G +H +
Sbjct: 3344 DDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTI 3403
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G+V TWG YG LG G++E +S+ + V + + G Y T ++ +G
Sbjct: 3404 LECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMV 3463
Query: 437 FGCGESASLG 446
FG LG
Sbjct: 3464 FGRNNKGQLG 3473
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H IA+T G+ YS+G N GQLGH + + P+ I S++ ++ AA + L
Sbjct: 444 GCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSAL 503
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +G++Y FG + G+ G+ T+ ++PQLV++L V + G + + + G
Sbjct: 504 VSVSGELYTFGMNDCGQ--LGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGE 561
Query: 272 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T + +LG H + V P L N V +A GY + A A +G+ YS
Sbjct: 562 VFTCGKNDHGQLGLGHNKQVKV---PTQVVLPNELVCFVACGYYH--ATAITSTGL-TYS 615
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS+ + P I N + V A G +H ++ G+V +G
Sbjct: 616 FGRNDYGQLGIGSKIHQNIP--IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNK 673
Query: 391 GCLGHGNEECESVP---KVVQALNDVKAIHVATGDYTTFVVSE 430
G LG+ +P KV N + +H+A G YTT ++ E
Sbjct: 674 GQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVE 716
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 141/301 (46%), Gaps = 15/301 (4%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
++++ G++++GE G S K+I + A GN VL ++G V+T
Sbjct: 3134 EIFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSI--AGGNEVLVVLMKDGAVFTCG 3191
Query: 277 WGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ G + + + P P+ L IP+ +AA LA G AVYS G
Sbjct: 3192 LNKSGQCGIGNFDERLIVPSPI-PALSGIPITMVAASNGCEHMLAISHDG-AVYSWGYND 3249
Query: 336 GGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCL 393
G+LG G+ + H PR+IE + + AA ++H +AVV +G + T+G G L
Sbjct: 3250 RGQLGLGTTVSKSHTPRVIESLREKYF--ITFAAVSYHHSAVVSNNGDLLTFGMNDSGQL 3307
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G + + + P++V+ L+ K VA G Y T + +DGDVYSFG E LG + +
Sbjct: 3308 GLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNT 3367
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ + L VN + VQ+ Y+ HT + E GK+ +G D GQLG
Sbjct: 3368 KVPMLVKIPPAPRTPMLDAVN-KAVQVYCG---YY--HTVTILECGKVVTWGRNDYGQLG 3421
Query: 514 I 514
I
Sbjct: 3422 I 3422
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 24/354 (6%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
S G +YS G NS G+LG G E + + I Q +G +++ G V
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTC 405
Query: 222 GKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
G + G+ +G + L+ Q + S + + + A+ G ++ G Y++ + +
Sbjct: 406 GLNKSGQCGHGNFDERVMLLRPIQALRSHR-VKYINASNGCEHLIAITDTGLAYSWGYND 464
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LGH + L+ +++ + A Y + ++ SG +Y+ G G+L
Sbjct: 465 RGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSV--SG-ELYTFGMNDCGQL 521
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G + P+L++ LL +V+ G +H + G V T G +G LG G+ +
Sbjct: 522 GLDHTQHQSTPQLVKA--LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNK 579
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
VP V N++ VA G Y ++ G YSFG + LG + H
Sbjct: 580 QVKVPTQVVLPNEL-VCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGS------KIHQ 632
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N+ ++S N R+V + Y HT +++SG+++ FG +KGQLG
Sbjct: 633 NIPIALTISS----NTRMVHAAC--GCY---HTLLMSDSGQVFVFGRNNKGQLG 677
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 20/197 (10%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
AV++ G G+ G G+ DE+ P I + + V + G H + DG V +
Sbjct: 3186 AVFTCGLNKSGQCGIGN-FDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYS 3244
Query: 385 WGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGES 442
WG+ G LG G +S P+V+++L + I A Y + VVS +GD+ +FG +S
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LG D ++H TPQLV +L +++V +++ +Y HT A+ + G +Y
Sbjct: 3305 GQLG----LDHTQHQH----TPQLVETLS--SQKVGRVAC--GLY---HTVAIVDDGDVY 3349
Query: 503 AFGAGDKGQLGIELVNN 519
+FG + GQLG+ N
Sbjct: 3350 SFGKNEYGQLGLSHTQN 3366
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 155/368 (42%), Gaps = 47/368 (12%)
Query: 166 VYSFGSNSSGQL--GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++S G N+ G+L GH + S + I+ I A G +++ G V+ G
Sbjct: 3135 IFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSI--AGGNEVLVVLMKDGAVFTCGL 3192
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--SREGRVYTFSWGNDA 281
+ G+ G +L+ P + +L I + A N +L S +G VY++ + +
Sbjct: 3193 NKSGQCGIGNFDERLIV-PSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRG 3251
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG T + ++ +L + AA + A+ + + G G+LG
Sbjct: 3252 QLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF--GMNDSGQLGL 3309
Query: 342 GSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
+ P+L+E L+ Q V VA G +H + DG V ++G YG LG + +
Sbjct: 3310 DHTQHQHTPQLVET---LSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQN 3366
Query: 401 ESVPKVVQ--------ALNDV-KAIHVATGDYTTFVVSEDGDVYSFGCGESASLG----- 446
VP +V+ L+ V KA+ V G Y T + E G V ++G + LG
Sbjct: 3367 TKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKE 3426
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
H +IA P +TS RV + S Y HT L +G+ FG
Sbjct: 3427 HKSIAQ---------FVPLPLTS------RVKRASC--GCY---HTLLLLVNGRPMVFGR 3466
Query: 507 GDKGQLGI 514
+KGQLG+
Sbjct: 3467 NNKGQLGV 3474
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 30/304 (9%)
Query: 216 GQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G++Y+ G++S+GE G ++ +L + P + Q GN A+L+ +G V
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWD----HIRQVVSGNEILAILTSDGVVL 403
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
T + GH V + L + V I A +A +G+A YS G
Sbjct: 404 TCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLA-YSWGY 462
Query: 334 GLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LGH + T P+LIE + ++ V+ H+A+V G + T+G G
Sbjct: 463 NDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYH--HSALVSVSGELYTFGMNDCGQ 520
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAI 450
LG + + +S P++V+AL V+ G Y + + G+V++ G + LG HN
Sbjct: 521 LGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNK- 579
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
Q V+ P NE V ++ Y+ H A+T +G Y+FG D G
Sbjct: 580 ---QVKVPTQVVLP---------NELVCFVACG---YY--HATAITSTGLTYSFGRNDYG 622
Query: 511 QLGI 514
QLGI
Sbjct: 623 QLGI 626
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 307 VQIAAGYCYLLALACQP------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
V I+ L AL QP S +YS G G+LG G IE+ QL +
Sbjct: 323 VNISPSLSKLSALREQPMYGKCESFGELYSCGQNSYGELGLGDD--------IERHQLTS 374
Query: 361 LQPVV-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND 412
+ P+ V +G A++ DG V T G + G GHGN +E + + +QAL
Sbjct: 375 V-PLCGWDHIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRS 433
Query: 413 --VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
VK I+ + G +++ G YS+G + LGH + + P+L+ S+
Sbjct: 434 HRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVG-------TKLYLPKLIESI 486
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
K+ + +S H+ ++ SG+LY FG D GQLG++ +Q+
Sbjct: 487 KEKKMKSAAVSY-------HHSALVSVSGELYTFGMNDCGQLGLDHTQHQS 530
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
KL L L+ E+ ++ A HS V+ G +Y+FG N GQLG T+ + P+
Sbjct: 476 KLYLPKLI--ESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQ 533
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
+++L G + + G +L + +G+V+ GK+ G + G+ K V P V L
Sbjct: 534 LVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG--QLGLGHNKQVKVPTQV-VLP 590
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
N V A G + ++ G Y+F + +LG ++ + P L + N +V
Sbjct: 591 NELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTIS-SNTRMVHA 649
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 368
A G CY L SG V+ G G+LG+ TD P ++ N++ + +AA
Sbjct: 650 ACG-CY-HTLLMSDSGQ-VFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAA 706
Query: 369 GAWHAAVVGQDGR 381
G + +++ + R
Sbjct: 707 GFYTTSLIVERKR 719
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS V++ G + +FG N SGQLG T+ + P+ + +L ++ + A G T+ I D
Sbjct: 3286 HSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDD 3345
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------SLKNI-FVVQAAIGNFFTAVL 266
G VY+FGK+ +G + G+ T+ P LV+ L + VQ G + T +
Sbjct: 3346 GDVYSFGKNEYG--QLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTI 3403
Query: 267 SREGRVYTFSWGNDARLG----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G+V T+ + +LG H P PL V+ A+ CY L
Sbjct: 3404 LECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLV 3457
Query: 323 PSGMAVYSVGCGLGGKLGHGSRT 345
V+ G G+LG SR+
Sbjct: 3458 NGRPMVF--GRNNKGQLGVASRS 3478
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGN 397
LGH + T++ +E+ + + + AG VV +DG V T G + G G GN
Sbjct: 3148 LGHCNPTNK-----LERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGN 3202
Query: 398 -EECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+E VP + AL+ + VA G +S DG VYS+G + LG
Sbjct: 3203 FDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLG-------L 3255
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
G + TP+++ SL++ + +T + H+ ++ +G L FG D GQLG+
Sbjct: 3256 GTTVSKSHTPRVIESLRE------KYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGL 3309
Query: 515 ELVNNQ 520
+ +Q
Sbjct: 3310 DHTQHQ 3315
>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 439
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 26/347 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSG-QLGHGTTEEE------WRPRPIRSLQGIRIIQAAA 204
AG HS+ +T G VY+ G + +G QLG EE + P + L + +++ AA
Sbjct: 100 AGENHSLFLTDDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAA 159
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G +++++ VY+FG++ +G G + +P LVE+L+ +VQ G+ +A
Sbjct: 160 GPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRW--TPTLVEALRGEEIVQVVAGDTNSA 217
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ-- 322
+++ G+V F WG+ R ND L+ L P+ +A G C+ L L
Sbjct: 218 AITKSGQV--FMWGS-CRSCIDLPSNDPTKPTLVEALSGTPIAAVALGECHCLFLTTDGL 274
Query: 323 --PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
G+ +Y G LG + R +++ PR I F +AAG H+ V+ +DG
Sbjct: 275 VLSCGLDLYHSGL-LGYDVRDNPRKEQRVPRPIPHFT--GEVAAAIAAGEGHSLVLTRDG 331
Query: 381 RVCTWGWGRYGCLGHGNEECE-------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
R+ +G R G LG G E +P V AL V+ V + ++ DG
Sbjct: 332 RLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALAHVQVAGVVAAPLHSCAIAHDGS 391
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
VYSFG GE LGH + + L P +TS+ + +
Sbjct: 392 VYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTLAL 438
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 168/394 (42%), Gaps = 48/394 (12%)
Query: 163 KGVVYSFGSNSS----GQLGHGTTEE-------EWR-PRPIRSLQGIRIIQAAAGAGRTM 210
+G+V+SFG S LGH EE W P I +L+G+RI AAG ++
Sbjct: 47 RGLVFSFGGGDSHFDQSVLGHPRQEEPSSHQGVRWAAPARIGALRGLRIAAVAAGENHSL 106
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTK------LVTSPQLVESLKNIFVVQAAIGNFFTA 264
++D GQVYA G S ++ G G + + P+ V L ++ VV+ A G +
Sbjct: 107 FLTDDGQVYACGV-SLNGSQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAAGPTHSL 165
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
VL+ VY+F LG N P L+ L +VQ+ AG + A S
Sbjct: 166 VLTSTAAVYSFGENRYGHLGLGDYENRWTP-TLVEALRGEEIVQVVAGDTN--SAAITKS 222
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVC 383
G C L D P L+E L+ P+ VA G H + DG V
Sbjct: 223 GQVFMWGSCRSCIDL---PSNDPTKPTLVEA---LSGTPIAAVALGECHCLFLTTDGLVL 276
Query: 384 TWGWGRY--GCLGHGNEEC----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G Y G LG+ + + VP+ + A +A G+ + V++ DG +++F
Sbjct: 277 SCGLDLYHSGLLGYDVRDNPRKEQRVPRPIPHFTGEVAAAIAAGEGHSLVLTRDGRLFAF 336
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G S LG G+ + NV P T L + + + + H+ A+
Sbjct: 337 GDNRSGQLGL-----GRTSPELNVSKP---TELPSPVAALAHVQVAGVVAAPLHSCAIAH 388
Query: 498 SGKLYAFGAGDKGQLGIELVNNQTERGN-PERVD 530
G +Y+FG G+ QLG + T+ N P+++D
Sbjct: 389 DGSVYSFGDGEFYQLG----HGTTDSWNVPKKID 418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 95/235 (40%), Gaps = 14/235 (5%)
Query: 129 WKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 188
W L L GE E Q +AG +S A+T G V+ +GS S + + +P
Sbjct: 193 WTPTLVEALRGE-----EIVQVVAGDTNSAAITKSGQVFMWGSCRS--CIDLPSNDPTKP 245
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF--GEAEYGVQGT--KLVTSPQL 244
+ +L G I A G + ++ G V + G D + G Y V+ K P+
Sbjct: 246 TLVEALSGTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRP 305
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEP--NDVEPHPLLGTL 301
+ A G + VL+R+GR++ F +LG T P N +P L +
Sbjct: 306 IPHFTGEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPV 365
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ VQ+A L +VYS G G +LGHG+ P+ I+
Sbjct: 366 AALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDAL 420
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+A P HS A+ G VYSFG QLGHGTT+ P+ I +L + A+ T+
Sbjct: 377 VAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTL 436
Query: 211 LI 212
+
Sbjct: 437 AL 438
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 13/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 26 GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK--KPDQVGALDAQTIVAVSCGEAHTLAL 83
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D GQV+++G + G+ V + P+ ++SL +I +VQ A G+ + LS+E +
Sbjct: 84 NDKGQVFSWGHAAHGQIGLSV-AEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDI 142
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
Y SWG + +LG +E + +L IP IAAG + AL SG A++
Sbjct: 143 Y--SWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTM--SG-AIFG 197
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG TD P L++ L + + + + G H A + ++G V T+G G Y
Sbjct: 198 WGRNKFGQLGLNDETDRSAPALLK--SLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 255
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
G LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 256 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ + +YS+G N GQLG G+ ++E PR I+SL GI AAG G
Sbjct: 125 QVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGG 184
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G ++ +G++ FG+ G+ ++P L++SL++ ++ G TA L+
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQL--GLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALT 242
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ ++V P + + +I V QIA G + LA PS
Sbjct: 243 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 299
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 300 IYSFGLGGNGQLGTGSTSNRKSP 322
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 161/346 (46%), Gaps = 34/346 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + G+ T+ + D G VY G + G+ + K P V +
Sbjct: 9 PRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK----PDQVGA 64
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 305
L +V + G T L+ +G+V FSWG+ A ++G + + + +L +I
Sbjct: 65 LDAQTIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQ 122
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPV 364
+VQ+A G+ + LAL+ + +YS G G+LG GS E PR I+ L +
Sbjct: 123 IVQVACGHHHSLALSKESD---IYSWGQNQYGQLGLGSEIKKESAPRHIKS--LAGIPFA 177
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+AAG H+ + G + WG ++G LG +E S P ++++L K IH+ G+
Sbjct: 178 HIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDH 237
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T ++++G V++FG G LGHN+ N N P+ V L + V QI+
Sbjct: 238 TAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGSIVTQIACGR 287
Query: 485 SIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 525
HT A SG++Y+FG G GQLG +N+ T +GN
Sbjct: 288 Q-----HTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 328
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG V+S+G + GQ+G E+ R PR I+SL I+I+Q A G ++
Sbjct: 76 GEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLA 135
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +Y++G++ +G+ G + K ++P+ ++SL I A G + L+ G
Sbjct: 136 LSKESDIYSWGQNQYGQLGLGSE-IKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGA 194
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P LL +L + ++ I G + AL + V+
Sbjct: 195 I--FGWGRNKFGQLGLNDETDRSAP-ALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 248
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S E +PR + F+L+ +A G H A V GR+ ++G G
Sbjct: 249 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 306
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 307 GNGQLGTGSTSNRKSPFTVK 326
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 34/298 (11%)
Query: 237 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPNDVE 293
++V P+ + N V G+ T + +G VYT + +LGH +P+ V
Sbjct: 4 EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKPDQV- 62
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRL 352
G L+ +V ++ G + LAL + V+S G G++G D + PR
Sbjct: 63 -----GALDAQTIVAVSCGEAHTLALNDKGQ---VFSWGHAAHGQIGLSVAEDYIRVPRN 114
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALN 411
I+ L ++Q V VA G H+ + ++ + +WG +YG LG G+E + ES P+ +++L
Sbjct: 115 IK--SLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLA 172
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ H+A G +F ++ G ++ +G + LG N D P L+ SL+
Sbjct: 173 GIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSA--------PALLKSLR 224
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+++++ I HT ALT+ G ++ FGAG GQLG N++ NP +V
Sbjct: 225 --SQKIIHICCGED-----HTAALTKEGGVFTFGAGGYGQLGHNSTNHEV---NPRKV 272
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAA 240
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 270
++ G V+ FG +G+ G T +P+ V L V Q A G T A + G
Sbjct: 241 LTKEGGVFTFGAGGYGQL--GHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 298
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
R+Y+F G + +LG + N P + G
Sbjct: 299 RIYSFGLGGNGQLGTGSTSNRKSPFTVKG 327
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 13/292 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G H++ +T G V+S G+N QLGH ++ +P + L RI + + G
Sbjct: 37 SQVTMGENHTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGN 94
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ ++ GQ++ +G DS G+ G GT P++++SL +VQ + G + L+
Sbjct: 95 HTLAFNEWGQLFGWGSDSHGQL--GFNGTT-QPLPKIIKSLATFHIVQISCGKNHSLALT 151
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G +Y++ D +LG ++ E P L+ +L IP+ IA G + AL+ SG
Sbjct: 152 NNGELYSWGGNYDGQLGLGMR-SEYEKQPTLIKSLLGIPIAFIACGSNHSFALS--KSG- 207
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
A+Y G G+LG ++ HP ++ + + ++ +A G +A + DG V T G
Sbjct: 208 AIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVK--YIACGEDFSAFLSADGGVFTCG 265
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 437
G YG LGHG+ E +P+ + L V+ G +T +V G VYSF
Sbjct: 266 AGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 32/344 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS G+LG G E + PI + Q G T++++ +G+V++ G
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ + + Q TK P+ VE L + + + G T + G++ F WG+D+
Sbjct: 61 NDLDQLGHKKQRTK----PEKVEGLDFYRITKISCGGNHTLAFNEWGQL--FGWGSDSH- 113
Query: 284 GHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
G +P P ++ +L +VQI+ G + LAL + +YS G G+LG G
Sbjct: 114 GQLGFNGTTQPLPKIIKSLATFHIVQISCGKNHSLALT---NNGELYSWGGNYDGQLGLG 170
Query: 343 SRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
R++ EK P LI+ LL + +A G+ H+ + + G + WG YG LG +EE +
Sbjct: 171 MRSEYEKQPTLIKS--LLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENK 228
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P ++ L ++ ++A G+ + +S DG V++ G G LGH + +N
Sbjct: 229 LHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGST--------SNE 280
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 504
+ P+ + L + V Q+S HT AL S G++Y+F
Sbjct: 281 ILPRKIMEL--MGSTVTQVSCGKR-----HTLALVPSRGRVYSF 317
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS A++ G +Y +G N+ GQLG E + P +++L+ IR+ A G + +
Sbjct: 196 GSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
S G V+ G +G+ +G +++ P+ + L V Q + G T A++ GR
Sbjct: 256 SADGGVFTCGAGMYGQLGHGSTSNEIL--PRKIMELMGSTVTQVSCGKRHTLALVPSRGR 313
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG----------------TLENIPVVQIAAG 312
VY+F G +LG + N P +LG T EN+ V I +G
Sbjct: 314 VYSFGLGGGGQLGTRVKTNCSTPQVVLGPWVSPSGVPVITDKKKTSENVLVTHIFSG 370
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH---HTEPNDVEPHPLLGTLENIPVV 307
V Q +G T +L++ G V FS GN+ +LGH T+P VE L+ +
Sbjct: 36 VSQVTMGENHTVMLTKSGEV--FSCGNNDLDQLGHKKQRTKPEKVE------GLDFYRIT 87
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
+I+ G + LA ++ G G+LG T + P++I+ L V ++
Sbjct: 88 KISCGGNHTLAFN---EWGQLFGWGSDSHGQLGFNGTT-QPLPKIIKS--LATFHIVQIS 141
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 426
G H+ + +G + +WG G LG G E E P ++++L + +A G +F
Sbjct: 142 CGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSF 201
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+S+ G +Y +G LG N N L P + +L+ + + + S
Sbjct: 202 ALSKSGAIYGWGKNTYGQLGLND--------EENKLHPTQLKTLRSIRVKYIACGEDFSA 253
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLG 513
+ L+ G ++ GAG GQLG
Sbjct: 254 F-------LSADGGVFTCGAGMYGQLG 273
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G +LGH + P +E + + + G H + G++ WG
Sbjct: 55 VFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKI--SCGGNHTLAFNEWGQLFGWGS 110
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+G LG N + +PK++++L + ++ G + ++ +G++YS+G LG
Sbjct: 111 DSHGQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG- 168
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
G R P L+ SL + I + + H+FAL++SG +Y +G
Sbjct: 169 ------LGMRSEYEKQPTLIKSL-------LGIPIAFIACGSNHSFALSKSGAIYGWGKN 215
Query: 508 DKGQLGIELVNNQTERGNPERV 529
GQLG+ N++ + +P ++
Sbjct: 216 TYGQLGL---NDEENKLHPTQL 234
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 173/355 (48%), Gaps = 27/355 (7%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
+ VY +G N QLG + P L ++ I A G+ ++S G++YA G
Sbjct: 2588 QSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 2647
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGND 280
+ + G G+ V P+ + L + + A+ G L+++G+V+++ G D
Sbjct: 2648 EGTNGR--LGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 2705
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH + +P L+ L++ + IA G + A+A S +Y+ G G G+LG
Sbjct: 2706 GKLGHGNCISLDKPK-LIEILKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLG 2761
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE 398
HG + P+L++ L+ + V VA G+ A + DG V +WG G +G LG G
Sbjct: 2762 HGDTITQTRPKLVQA--LVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 2819
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P V LN + I V G + +++ G+V+++G G+ LGH GN H
Sbjct: 2820 DGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH 2872
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V P LV L+ ++++ +++ H A+T++G++YA+G D GQ G
Sbjct: 2873 -HVRKPTLVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 2919
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 17/341 (4%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA--AGAG 207
IAG ++ + S+ G +Y+ G ++G+LG G P+ I L I + A +G
Sbjct: 2627 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGK 2686
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G+V+++G+ G+ +G + P+L+E LK+ + A G+ +A ++
Sbjct: 2687 HALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEILKSKRIRDIACGSGHSAAIA 2744
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G +YT+ G RLGH P L+ L VVQ+A G +A G
Sbjct: 2745 SNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALVGQRVVQVACGSRDAQTMALTTDG-C 2802
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G GKLG G P +++ L + + V GA + + + G V TWG
Sbjct: 2803 VYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGV--IQVECGAQFSLALTKYGEVWTWGK 2860
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G Y LGHGN+ P +V+ L K IHVA G V++ G VY++G + G+
Sbjct: 2861 GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2920
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
A + NR P LV L+ V ++SI W
Sbjct: 2921 GATS---VNRK-----PSLVHDLEDARVNRVSCGSSHSIAW 2953
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 155/337 (45%), Gaps = 34/337 (10%)
Query: 176 QLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 235
+ G+G+T P + G+ I Q M++S G Y S E +Y ++
Sbjct: 87 KFGNGST-----PFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMYHGS--ETQYPLRV 139
Query: 236 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 295
P + A G + A L+++G VY++ G+ RLGH + EP
Sbjct: 140 HGFSDKPI-------TMIASHADGKHYLA-LTQDGCVYSWGNGDGGRLGHGDTVSYDEPK 191
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L+ +L + +V IA G Y AL+ SG +Y+ G G G+LGHG+ D P L+
Sbjct: 192 -LIESLLDKNIVFIACGSTYSAALSA--SG-ELYTWGRGNYGRLGHGNFDDVLTPTLVTT 247
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+ + V +G V G V +WG G YG LG G + PK+V L D+
Sbjct: 248 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 307
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+ V G + ++ G+VY++G G++ LGH + +V P+++ SL+ ++
Sbjct: 308 VKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGS--------EEHVRYPKVIESLR--DK 357
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
++ +S+ + H ALTE +Y +G D GQ+
Sbjct: 358 KIKDLSVGTT-----HILALTEDQFVYGWGRNDYGQI 389
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T G VYS+G+ G+LGHG T P+ I SL I+ A G+ + +S +
Sbjct: 158 HYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSAS 217
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G+ ++G +G V +P LV +LK VV A G+ + L F
Sbjct: 218 GELYTWGRGNYGRLGHG--NFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 275
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+ +LG P ++ L +I VV++ G + AL VY+ G
Sbjct: 276 SWGDGDYGKLGRGGTDGSKTPK-IVDKLLDINVVKVFCGGQFSAALTAHGE---VYTWGK 331
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G +LGHGS ++P++IE + ++ + V G H + +D V WG YG +
Sbjct: 332 GDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSV--GTTHILALTEDQFVYGWGRNDYGQI 389
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
S P + L+ I +A+G +F
Sbjct: 390 DPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSF 422
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 43/300 (14%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V A+G FG ++P + + + + Q +LS G Y
Sbjct: 79 EVLAWGGVKFGNG----------STPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMY 128
Query: 277 WGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G++ + +PL + + P+ IA+ LA G VYS G G
Sbjct: 129 HGSETQ------------YPLRVHGFSDKPITMIASHADGKHYLALTQDG-CVYSWGNGD 175
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
GG+LGHG P+LIE LL+ V +A G+ ++A + G + TWG G YG LGH
Sbjct: 176 GGRLGHGDTVSYDEPKLIES--LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGH 233
Query: 396 GNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GN + P +V L +HVA +GD T V+ G V+S+G G+ LG DG
Sbjct: 234 GNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-TDG 292
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP++V L +N VV++ + ALT G++Y +G GD +LG
Sbjct: 293 SK-------TPKIVDKLLDIN--VVKVFCGGQF-----SAALTAHGEVYTWGKGDAYRLG 338
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G +S A+++ G +Y++G + G+LGHG ++ P + +L+G ++ A G+G +T+
Sbjct: 207 GSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTL 266
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+++G +G+ G GT +P++V+ L +I VV+ G F+A L+ G
Sbjct: 267 CVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHG 324
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
VYT+ G+ RLGH +E + P ++ +L + + ++ G ++LAL
Sbjct: 325 EVYTWGKGDAYRLGHGSEEHVRYPK-VIESLRDKKIKDLSVGTTHILAL 372
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 39/281 (13%)
Query: 233 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 292
+Q K++ +PQ +S V+ +G+ FT ++ E R + + +D
Sbjct: 2468 IQSLKIIVNPQ--DSSYMPCVIAVNVGDSFTNLV--EFRTISIRY------------SDT 2511
Query: 293 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
L E P V+IA C + C+ G+ + +G + ++ L
Sbjct: 2512 SVTLLQDIKEYYPCVEIAIKQCRNGGIDCKIHGLRI------IGRQNMFENQLTTSVSFL 2565
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+++L Q + + Q V WG LG +P + L+
Sbjct: 2566 ASDWEVLQEQVAIQRS----TDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSK 2621
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+K IH+A G T F+VS++G +Y+ G G + LG G N NV P+ + L Q
Sbjct: 2622 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL-----GDDN---NVCEPKAIPFLSQ 2673
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ V + H ALT+ GK++++G G+ G+LG
Sbjct: 2674 FVIKKVAVHSGGK-----HALALTQDGKVFSWGEGEDGKLG 2709
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ VT+ G+V+S+G G+LG G T+ P+ + L I +++ G +
Sbjct: 260 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAA 319
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G+VY +GK +G + + V P+++ESL++ + ++G L+ +
Sbjct: 320 LTAHGEVYTWGKGDAYRLGHGSE--EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQF 377
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
VY + + ++ P EP L TL + V+ +A+G
Sbjct: 378 VYGWGRNDYGQIDPTLGPVVSEP-TLCPTLSSKTVIGLASG 417
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G S A+T+ G VY++G + +LGHG+ E P+ I SL+ +I + G
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTH 368
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ +++ VY +G++ +G+ + + +V+ P L +L + V+ A G
Sbjct: 369 ILALTEDQFVYGWGRNDYGQIDPTL--GPVVSEPTLCPTLSSKTVIGLASG 417
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 38/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTM 210
AG HS+AV S G V+++G+N SG+LG GT + RPRP++ +QG+ + +AG ++
Sbjct: 744 AGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQ--RPRPVQ-VQGLGSAVAVSAGTNHSL 800
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+A+G +S G+ G T+ V P V L + V A G+ + L +G
Sbjct: 801 AVQSDGTVWAWGGNSQGQLGDGTGITRYV--PVRVSGLNGVMAVSA--GSAHSLALRSDG 856
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + +LG T + P + G VV IAAG + LA+ + V++
Sbjct: 857 TVWAWGYNFYGQLGDATSTQRLVPIQVPGLTG---VVSIAAGTHHSLAVRSDGT---VWA 910
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G++ P + + V VAAG +H+ V +G V WG+ +
Sbjct: 911 WGYNFYGQLGDGTKIQRSPPVQVPGLAGM----VSVAAGTYHSLAVHSNGTVWAWGYNNH 966
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G +P + + + V A A ++ + VV DG V+ +G ++ LG +
Sbjct: 967 GQLGDGTTTQRLLPVPISSSSGVIA---AAANWHSLVVRTDGTVWGWGSNNASQLGDGST 1023
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+D + TP V V IS + H+ AL G ++A+G G+ G
Sbjct: 1024 SD------RKMPTP------SSVPNGVRSISSGAN-----HSLALRSDGTVWAWGFGNSG 1066
Query: 511 QLG 513
QLG
Sbjct: 1067 QLG 1069
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 39/360 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV+ G V+++G N SG+LG GTT P + L ++ AAG+ ++ +
Sbjct: 498 HSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLS--SMVAVAAGSTHSLALRAD 555
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G +S G G +L SP V L VV A GN ++ + +G V+ +
Sbjct: 556 GTVWAWGDNSNGALGDGTTLRRL--SPVQVPGLSG--VVALAAGNGYSLAVDAQGSVWAW 611
Query: 276 SWGNDARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ +LG T V P P L VV +AAG + LAL + G+A ++ G
Sbjct: 612 GYNGMGQLGDGTTTPRVTPTQAPALSG-----VVALAAGDSHSLAL--RADGVA-WAWGG 663
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG + + P + + V +AAG H+ V+ DG +WG YG L
Sbjct: 664 NDQGQLGDATTLERSTPAAVPGLAHV----VALAAGNAHSLVLHADGTSSSWGNNAYGQL 719
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G VP V + +K VA G + V DG V+++G S LG DG
Sbjct: 720 GDGTSTLHPVPVQVPGPSAMKG--VAAGGSHSLAVRSDGTVWAWGNNGSGELG-----DG 772
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + P+ V ++ + V + TN H+ A+ G ++A+G +GQLG
Sbjct: 773 TGLQR-----PRPV-QVQGLGSAVAVSAGTN------HSLAVQSDGTVWAWGGNSQGQLG 820
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS+ + S G V+++G N+ GQLG GT + P ++SL ++ A G
Sbjct: 41 QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQH 98
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G V+A+G + FG+ G V P V SL + + A G+ + L
Sbjct: 99 SLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVAIAA--GDHHSLALLS 154
Query: 269 EGRVYTFSWGNDARLGHHT---EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+G V+ + + +LG T P V+ L G VV ++AG + LA+
Sbjct: 155 DGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG------VVALSAGSTHSLAVLSDGK- 207
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V + G G+LG GS T+ P L+ L ++ VV AG +H+ + DG V W
Sbjct: 208 --VKAWGDNYYGQLGDGSSTERWTPVLVS--SLTGVKSVV--AGTFHSLALCSDGTVRAW 261
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G LG + VP VV L +V+A+ A G + + DG V ++G + +
Sbjct: 262 GENGSGQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGTVRAWGNNDHGQV 319
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G+ I + LTP V + ++ AH+ A+ G +A+G
Sbjct: 320 GNGTI--------SQQLTPVQVPGVGRMKSIAAG---------GAHSLAMRADGITWAWG 362
Query: 506 AGDKGQLGIELVNNQTERGNPERV 529
+GQLG + Q P RV
Sbjct: 363 DDSQGQLGDGQSSQQLR---PARV 383
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++G NS GQLG GT + P + L G+ + +AG+ ++
Sbjct: 794 AGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAV--SAGSAHSLA 851
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + +G+ +LV P V L VV A G + + +G
Sbjct: 852 LRSDGTVWAWGYNFYGQLGDATSTQRLV--PIQVPGLTG--VVSIAAGTHHSLAVRSDGT 907
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T+ P + G +V +AAG + LA+ + V++
Sbjct: 908 VWAWGYNFYGQLGDGTKIQRSPPVQVPGLAG---MVSVAAGTYHSLAVHSNGT---VWAW 961
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P I V+ AA WH+ VV DG V WGWG
Sbjct: 962 GYNNHGQLGDGTTTQRLLPVPISSS-----SGVIAAAANWHSLVVRTDGTV--WGWGSNN 1014
Query: 392 C--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
LG G+ +P N V++I ++G + + DG V+++G G S LG
Sbjct: 1015 ASQLGDGSTSDRKMPTPSSVPNGVRSI--SSGANHSLALRSDGTVWAWGFGNSGQLGDGV 1072
Query: 450 IA 451
++
Sbjct: 1073 MS 1074
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 157/363 (43%), Gaps = 37/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G NS+G LG GTT P + L G ++ AAG G ++
Sbjct: 544 AGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLA 601
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G T +P +L VV A G+ + L +G
Sbjct: 602 VDAQGSVWAWGYNGMGQLGDGT--TTPRVTPTQAPALSG--VVALAAGDSHSLALRADGV 657
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+ + + +LG T P + G VV +AAG + L L + S
Sbjct: 658 AWAWGGNDQGQLGDATTLERSTPAAVPGLAH---VVALAAGNAHSLVLHADGT---SSSW 711
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P + + VAAG H+ V DG V WG G
Sbjct: 712 GNNAYGQLGDGTSTLHPVPVQVPGPSAMK----GVAAGGSHSLAVRSDGTVWAWGNNGSG 767
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G P VQ L A+ V+ G + V DG V+++G LG
Sbjct: 768 ELGDGTGLQRPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLG----- 820
Query: 452 DGQG-NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
DG G R+ P V+ L V+ +S +AH+ AL G ++A+G G
Sbjct: 821 DGTGITRY----VPVRVSGLNG----VMAVSAG-----SAHSLALRSDGTVWAWGYNFYG 867
Query: 511 QLG 513
QLG
Sbjct: 868 QLG 870
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 169/367 (46%), Gaps = 45/367 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V ++G N GQLG G++ E W P + SL G++ + AG ++
Sbjct: 194 AGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSV--VAGTFHSLA 251
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V A+G++ G + G+ T P +V L N+ + A G+ + L +G
Sbjct: 252 LCSDGTVRAWGEN--GSGQLGISSTTRRPVPVVVPGLTNVQALAA--GSAHSLALRSDGT 307
Query: 272 VYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V +WGN+ ++G+ T + P P +G +++ IAAG + +LA + G+
Sbjct: 308 VR--AWGNNDHGQVGNGTISQQLTPVQVPGVGRMKS-----IAAGGAH--SLAMRADGI- 357
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
++ G G+LG G + + P R++ Q + L G H+ + DG V WG
Sbjct: 358 TWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMPL-----GTGNRHSLALHADGTVWAWG 412
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G + ++P V L V + T + DG V+++G LG
Sbjct: 413 VNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATTSH--SLAARADGTVWAWGDNAFGQLG 470
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
DG + L P V L V+ +S++ H+ A++ G ++A+G
Sbjct: 471 -----DGTTTQR---LLPVQVPGLAGVDT-------VSSMH--QHSLAVSRDGTVWAWGF 513
Query: 507 GDKGQLG 513
G+LG
Sbjct: 514 NGSGRLG 520
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 19/260 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V+++G N GQLG T+ + P + L G+ + AAG ++
Sbjct: 844 AGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGV--VSIAAGTHHSLA 901
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+A+G + +G+ GTK+ SP + V L + V A G + + + G
Sbjct: 902 VRSDGTVWAWGYNFYGQLG---DGTKIQRSPPVQVPGLAGM--VSVAAGTYHSLAVHSNG 956
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + N +LG T + P P+ + V+ AA + L+ + G V+
Sbjct: 957 TVWAWGYNNHGQLGDGTTTQRLLPVPIS---SSSGVIAAAANWHSLV---VRTDGT-VWG 1009
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G +LG GS +D K P + +++GA H+ + DG V WG+G
Sbjct: 1010 WGSNNASQLGDGSTSDRKMPTPSSVPNGVR----SISSGANHSLALRSDGTVWAWGFGNS 1065
Query: 391 GCLGHGNEECESVPKVVQAL 410
G LG G VP V
Sbjct: 1066 GQLGDGVMSMRLVPAGVSGF 1085
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 120 bits (301), Expect = 2e-24, Method: Composition-based stats.
Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 52/394 (13%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIR-IIQAAAGAGRT 209
G H +T G +Y++GSN SGQLGHG + P+ + +G I G T
Sbjct: 1130 GWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHT 1189
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ + VY++G D FG+ +G + + P+++E L + A G VL +
Sbjct: 1190 IAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAGFAHNIVLKKS 1248
Query: 270 GRVYTFSWGNDARLG---HHTE--PNDVEPHPLLGTLENI---PVVQIAAGYCYLLALAC 321
G +++F +G+ +LG H++ P +E + ++G L++ + QIA G+ + ++ C
Sbjct: 1249 GELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH--SVIC 1306
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+G VYS G G G+LGH + PRLIE + + ++ G +H
Sbjct: 1307 SENG-EVYSWGLGKQGQLGHKVFENISKPRLIETLRGV----TKISCGHFHTVATTDLKN 1361
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS----------ED 431
V +WG G + LGH +++ ESVPKVV V G T ++ +D
Sbjct: 1362 VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDD 1421
Query: 432 GD-----------VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE-RVVQ 479
D +Y++G E LG G+ + + T++K VN ++
Sbjct: 1422 EDEENMNGKSSSPIYAWGSAEHGKLGLG------GDLKSPFFDKPIPTAIKGVNSLNLID 1475
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
IS + + +T + +Y +G G GQ+G
Sbjct: 1476 ISCGSDF-----SAMITSNNAIYVWGCGRFGQIG 1504
Score = 115 bits (288), Expect = 5e-23, Method: Composition-based stats.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 42/329 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+IAV S VYS+GS+ GQLGHGT + RP+ I L G +I AAG ++
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-------VVQAAIGNFFTA 264
+ +G++++FG FG+ G +K + + + ++ + Q A G +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+ S G VY++ G +LGH N +P L+ TL V +I+ G+ + +A +
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPR-LIETLRG--VTKISCGHFHTVATTDLKN 1361
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-------- 376
VYS G G KLGH S DE P++++ F N+ VV G H +
Sbjct: 1362 ---VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVV--CGQNHTMTITFPDDLNN 1416
Query: 377 -GQDGR------------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHV 418
QD + WG +G LG G + + +P ++ +N + I +
Sbjct: 1417 SNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDI 1476
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+ G + +++ + +Y +GCG +G+
Sbjct: 1477 SCGSDFSAMITSNNAIYVWGCGRFGQIGN 1505
Score = 106 bits (264), Expect = 4e-20, Method: Composition-based stats.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 57/350 (16%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVV 254
+ I+ + G +I+D G++Y +G + G+ +G++ K ++ P+ V+ + IF+V
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMV 1182
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+ G AV + + +SWG+D +LGH T+ + ++ L + IAAG
Sbjct: 1183 ECG-GEHTIAV---DSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAG 1238
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQP------VV 365
+ + + L + SG ++S G G G+LG GS + P IE ++ LQ
Sbjct: 1239 FAHNIVL--KKSG-ELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQ 1295
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+A G H+ + ++G V +WG G+ G LGH E S P++++ L V I + G + T
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKI--SCGHFHT 1353
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
++ +VYS+G GE LGH++ D S+ +V + +Q +++
Sbjct: 1354 VATTDLKNVYSWGSGEHMKLGHSSDKD---------------ESVPKVVDFFIQKNVSKV 1398
Query: 486 IYWNAHTFALT---------------------ESGKLYAFGAGDKGQLGI 514
+ HT +T S +YA+G+ + G+LG+
Sbjct: 1399 VCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGL 1448
Score = 86.3 bits (212), Expect = 4e-14, Method: Composition-based stats.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 41/297 (13%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR------SLQ---GIR 198
QAIA G H+I + G ++SFG GQLG G+ + P I LQ G +
Sbjct: 1233 QAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGK 1292
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I Q A G G +++ S+ G+VY++G G+ + V + ++ P+L+E+L+ V + +
Sbjct: 1293 ITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKV--FENISKPRLIETLRG--VTKISC 1348
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+F T + VY++ G +LGH ++ ++ P + ++ V ++ G + +
Sbjct: 1349 GHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK-NVSKVVCGQNHTMT 1407
Query: 319 LACQ------------------PSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQ 355
+ S +Y+ G GKLG G D+ P I+
Sbjct: 1408 ITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKG 1467
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
LNL + ++ G+ +A++ + + WG GR+G +G+G + VP + +LND
Sbjct: 1468 VNSLNL--IDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI-SLND 1521
Score = 72.0 bits (175), Expect = 8e-10, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
Query: 328 VYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCT 384
+Y+ G G+LGHG ++ P+ ++ F+ P+ +V G H V + V +
Sbjct: 1143 LYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR--GKSPIFMVECGGEHTIAVDSNYFVYS 1200
Query: 385 WGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG ++G LGHG + +S PKV++ L K +A G V+ + G+++SFG G+
Sbjct: 1201 WGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFG 1260
Query: 444 SLGHNAIADGQGNRHA-NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LG G+ H+ N+ T + ++ + +T H+ +E+G++Y
Sbjct: 1261 QLG-------TGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVY 1313
Query: 503 AFGAGDKGQLGIELVNN 519
++G G +GQLG ++ N
Sbjct: 1314 SWGLGKQGQLGHKVFEN 1330
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V + G F T ++ G + F+WG N LG TE + P + G LE
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + A S +Y+ G G G LGHG R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417
Query: 364 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ VA G WH+A V Q G ++ TWG G LGHG++E VPK VQAL +
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+A G T ++ G V++ G + LG N +DG+ P LV +
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLA 527
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS S H LT ++Y +G G G+LG
Sbjct: 528 SELVEEISCGAS-----HVTVLTSRSEVYTWGMGANGRLG 562
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 26/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G ++++G S G LG GT W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
L + +G++Y FG +FG +G + T + P+ VE+L ++ A G + +A
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433
Query: 265 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
V+S+ ++YT+ G+ RLGH + + P + LE Q+A G+ +
Sbjct: 434 TNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YNFHQLACGHNMTV 490
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
ALA + V+++G G+LG+ ++D K P L+ Q +L + ++ GA H V+
Sbjct: 491 ALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLT 545
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 546 SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +Y+FG + G LGHG E P+ + +L G + I+ A G + I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + ++Y +G +G + +LV P+ V++L Q A G+
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYNFHQLACGHNM 488
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ GRV+T ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S VY+ G G G+LGHG D K P L+E + +++ + + H V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 409
D VCT + R+ C G C S KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 33/339 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H T +G V+++G G+LGHGT + RP+ + SL + + G
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVL 266
T ++ +G ++ +G S+ G P+ V L+ + V+ A G++ +A+
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378
Query: 267 SREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA- 320
+ G++YTF G LGH P +VE L +++A G + A+
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKEVE------ALSGFKTIKVACGIWHSAAIVE 432
Query: 321 ------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWH 372
+Y+ G G +LGHG +K PRL+ + LL +A G
Sbjct: 433 VTNQTGANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYNFHQLACGHNM 488
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ GRV T G G LG+ + + V L ++ G V++
Sbjct: 489 TVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRS 548
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+VY++G G + LGH + D + P LV +LK
Sbjct: 549 EVYTWGMGANGRLGHGDLKDRK--------KPCLVEALK 579
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 166/367 (45%), Gaps = 35/367 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ + G+++++G N SGQLG+GT E PR + S R+ A+G T +
Sbjct: 663 HTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFA--RVQGFASGLRTTFALRAD 720
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G +S G+ G SP V+++ V A G +S +G V++F
Sbjct: 721 GTVWAWGDNSLGQLGNGAT----SASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSF 776
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ +LG+ P L G E I V AAG + LAL+C V++ G
Sbjct: 777 GSNSRGQLGYEGSATQTSPRWLTGP-ECIEAV--AAGALFSLALSCD---GGVWAWGDNG 830
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG G+ T P + + V +AAG+ HA V DG V WG G LG
Sbjct: 831 SGQLGDGAVTARTAPARVPGLAHV----VAIAAGSDHALAVRADGTVWAWGANGSGQLGD 886
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G +VP V+ L DV + VA G + V DG V+++G S LG G
Sbjct: 887 GTTTSRAVPMQVKELVDV--VAVAGGSGHSLAVRADGTVWAWGANGSGQLG-------DG 937
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+ L P V++L V H+ AL E G ++A+GA GQLG
Sbjct: 938 TTTSRTL-PVFVSTLSGVQAIASGAQ---------HSLALAEGGVVWAWGANGSGQLGDG 987
Query: 516 LVNNQTE 522
++T
Sbjct: 988 TTTSRTR 994
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 178/370 (48%), Gaps = 40/370 (10%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+ A+ + G V+++G NS GQLG+G T P P++++ R + A+GA + +S G
Sbjct: 714 TFALRADGTVWAWGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDG 771
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
V++FG +S G+ Y +G+ TSP+ + + I V A G F+ LS +G V+ +
Sbjct: 772 SVFSFGSNSRGQLGY--EGSATQTSPRWLTGPECIEAVAA--GALFSLALSCDGGVW--A 825
Query: 277 WGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
WG++ +LG P + G VV IAAG + LA+ + V++ G
Sbjct: 826 WGDNGSGQLGDGAVTARTAPARVPGLAH---VVAIAAGSDHALAVRADGT---VWAWGAN 879
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G+ T P +++ + V VA G+ H+ V DG V WG G LG
Sbjct: 880 GSGQLGDGTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLG 935
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G ++P V L+ V+AI A+G + ++E G V+++G S LG DG
Sbjct: 936 DGTTTSRTLPVFVSTLSGVQAI--ASGAQHSLALAEGGVVWAWGANGSGQLG-----DGT 988
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P V+ L V V S + ALT GK++++G GQLG
Sbjct: 989 TTSRTR---PVQVSGLSGVQGLVAGASFS---------LALTP-GKVWSWGNNSAGQLGD 1035
Query: 515 ELVNNQTERG 524
+N++++ G
Sbjct: 1036 GTLNSRSQPG 1045
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 174/380 (45%), Gaps = 40/380 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTM 210
AG HS+A+ S G V+++G NS GQLG G T PR + G+ +I AAG ++
Sbjct: 507 AGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRG--PRAPAVVPGLAVITHVAAGLFHSL 564
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-GNFFTAVLSRE 269
+ +GQV+A+G + +G+ G ++ V P V L +QA + G ++ L +
Sbjct: 565 ALDSSGQVWAWGDNVYGQLGDGSTTSRNV--PGRVSGLP--AGIQAIVAGPSYSVALGAD 620
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+T+ ++ +LG T P P ++P +A +A +GM ++
Sbjct: 621 GSVWTWGENSNGQLGDGT--TTARPVP---ARVSLPATLVALSTRGSHTVALDTTGM-LW 674
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G + G+LG+G+ E PR + F + A+G + DG V WG
Sbjct: 675 AWGRNVSGQLGNGTLVSESTPRRVPSFARVQ----GFASGLRTTFALRADGTVWAWGDNS 730
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG+G VP VQA+ + + +A+G VS DG V+SFG LG+
Sbjct: 731 LGQLGNGATSASPVP--VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEG 788
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
A +P+ +T + + E V +L + AL+ G ++A+G
Sbjct: 789 --------SATQTSPRWLTGPECI-EAVAAGAL--------FSLALSCDGGVWAWGDNGS 831
Query: 510 GQLGIELVNNQTERGNPERV 529
GQLG V T R P RV
Sbjct: 832 GQLGDGAV---TARTAPARV 848
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 164/374 (43%), Gaps = 47/374 (12%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ S G V+++G N+ GQLG T RP P + + AAG ++ +
Sbjct: 461 HSLALRSDGTVWAWGDNAYGQLGD--TSGGRRPSPAQVPGVAGATEIAAGTYHSLALRSD 518
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+ +G +S+G+ G + +P +V L + A G F + L G+V+
Sbjct: 519 GTVWTWGDNSYGQLGAGAT-PRGPRAPAVVPGLA--VITHVAAGLFHSLALDSSGQVW-- 573
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSV 331
+WG++ +LG + + P G + +P + I AG Y +AL S V++
Sbjct: 574 AWGDNVYGQLGDGSTTSRNVP----GRVSGLPAGIQAIVAGPSYSVALGADGS---VWTW 626
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-- 389
G G+LG G+ T P + +L +VA + V D W WGR
Sbjct: 627 GENSNGQLGDGTTTARPVPARV------SLPATLVALSTRGSHTVALDTTGMLWAWGRNV 680
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG+G ES P+ V + V+ A+G TTF + DG V+++G LG+ A
Sbjct: 681 SGQLGNGTLVSESTPRRVPSFARVQGF--ASGLRTTFALRADGTVWAWGDNSLGQLGNGA 738
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGD 508
TS V + V T + A H A++ G +++FG+
Sbjct: 739 ------------------TSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNS 780
Query: 509 KGQLGIELVNNQTE 522
+GQLG E QT
Sbjct: 781 RGQLGYEGSATQTS 794
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 170/385 (44%), Gaps = 51/385 (13%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ VT G V+++G+N+ GQLG G+T + P + L G+ + AAG +M
Sbjct: 55 AGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAV--AAGNTHSMA 112
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G ++ G+ GV + P V L + + A GN + L G
Sbjct: 113 LREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGVTAIAA--GNLHSLAL-INGA 166
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WGN+ +LG + + P + G E VV IAAG + LAL + V+
Sbjct: 167 VW--AWGNNTTGQLGDGSSTSRSTPAKVAGLTE---VVAIAAGDFHSLALKRDGT---VW 218
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD---GRVCTWG 386
+ G G+LG G+ P + + V +A G H+ G+V WG
Sbjct: 219 AWGGNYSGQLGDGTLDSRSTPVRVSGLTGI----VALAGGGSHSVAASSTTLGGKVWAWG 274
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG+G + +P V L V A+ A+G + + D V+++G
Sbjct: 275 DNTYGQLGNGGDVSSLLPLEVPGLTQVVAL--ASGTSHSLALRGDDSVWAWG-------- 324
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK--LYAF 504
+A T Q TS+++V RV +S ++ + F+L G +
Sbjct: 325 ----------DNAQAQTAQTGTSVQRVPVRVSGVSDAQALA-CGNAFSLVGRGDNVTLGW 373
Query: 505 GAGDKGQLGIELVNNQTERGNPERV 529
GA GQLG + + R P RV
Sbjct: 374 GANGSGQLGN---GSSSVRALPGRV 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 21/300 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTM 210
+G H +AV+S G V+SFGSNS GQLG+ + + P R L G I+A AAGA ++
Sbjct: 759 SGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSP---RWLTGPECIEAVAAGALFSL 815
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+S G V+A+G + G + G T+P V L ++ + A G+ + +G
Sbjct: 816 ALSCDGGVWAWGDN--GSGQLGDGAVTARTAPARVPGLAHVVAIAA--GSDHALAVRADG 871
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + +LG T + P + E + VV +A G + LA+ + V++
Sbjct: 872 TVWAWGANGSGQLGDGTTTSRAVPMQV---KELVDVVAVAGGSGHSLAVRADGT---VWA 925
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T P + + +A+GA H+ + + G V WG
Sbjct: 926 WGANGSGQLGDGTTTSRTLPVFVSTLSGVQ----AIASGAQHSLALAEGGVVWAWGANGS 981
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G + P V L+ V+ + VA ++ + G V+S+G + LG +
Sbjct: 982 GQLGDGTTTSRTRPVQVSGLSGVQGL-VAGASFSLALT--PGKVWSWGNNSAGQLGDGTL 1038
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 160/377 (42%), Gaps = 61/377 (16%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+++G N SGQLG GT + R P+R + G+ I A AG G +
Sbjct: 203 AGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS--RSTPVR-VSGLTGIVALAGGGSHSV 259
Query: 212 ISDA----GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ + G+V+A+G +++G+ G + L+ P V L + A+ + + L+
Sbjct: 260 AASSTTLGGKVWAWGDNTYGQLGNGGDVSSLL--PLEVPGLTQVV----ALASGTSHSLA 313
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G ++WG++A+ V+ P+ +G ALAC G A
Sbjct: 314 LRGDDSVWAWGDNAQAQTAQTGTSVQRVPVR-----------VSGVSDAQALAC---GNA 359
Query: 328 VYSVGCG----LG------GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
VG G LG G+LG+GS + P + +AAG H +
Sbjct: 360 FSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPSLT----AGASLAAGDHHVFLRQ 415
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V WG YG LG G P ++ L V+A+ ++ Y + + DG V++
Sbjct: 416 ADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASS--YHSLALRSDGTVWA 473
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G LG D G R +P V + E + Y H+ AL
Sbjct: 474 WGDNAYGQLG-----DTSGGRRP---SPAQVPGVAGATE------IAAGTY---HSLALR 516
Query: 497 ESGKLYAFGAGDKGQLG 513
G ++ +G GQLG
Sbjct: 517 SDGTVWTWGDNSYGQLG 533
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 138/324 (42%), Gaps = 43/324 (13%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
R P S+QG R + AAG ++ ++ AG V+A+G ++ + + G T ++P V
Sbjct: 39 RRAPAISVQG-RPYRLAAGLNHSLYVTPAGTVWAWGANA--QGQLGEGSTLQHSTPTQVV 95
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
L + V A GN + L EG V+T+ D +LG V P + G V
Sbjct: 96 GLTGVTAVAA--GNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSV-PAQVAGLTG---V 149
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
IAAG + LAL AV++ G G+LG GS T P + + V +
Sbjct: 150 TAIAAGNLHSLALING----AVWAWGNNTTGQLGDGSSTSRSTPAKVAGLT----EVVAI 201
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-----HVATG 421
AAG +H+ + +DG V WG G LG G + S P V L + A+ H
Sbjct: 202 AAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAA 261
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
TT G V+++G LG+ + L P V L QV ++
Sbjct: 262 SSTTL----GGKVWAWGDNTYGQLGNGG--------DVSSLLPLEVPGLTQV------VA 303
Query: 482 LTNSIYWNAHTFALTESGKLYAFG 505
L + +H+ AL ++A+G
Sbjct: 304 LASG---TSHSLALRGDDSVWAWG 324
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV + G V+++G+N SGQLG GTT P ++ L + ++ A G+G ++
Sbjct: 859 AGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL--VDVVAVAGGSGHSLA 916
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G ++ T P V +L + + A G + L+ G
Sbjct: 917 VRADGTVWAWGANGSGQLGDGTTTSR--TLPVFVSTLSGVQAI--ASGAQHSLALAEGGV 972
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 330
V+ + +LG T + P + G + VQ + AG + LAL V+S
Sbjct: 973 VWAWGANGSGQLGDGTTTSRTRPVQVSG----LSGVQGLVAGASFSLALTPGK----VWS 1024
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
G G+LG G+ P V ++AGA H V+ D +WG
Sbjct: 1025 WGNNSAGQLGDGTLNSRSQPGAGPTLSSF----VALSAGAQHTVVLRSDDSFLSWG 1076
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 19/288 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+A++ G V+++G N SGQLG G R P R ++ AAG+ +
Sbjct: 809 AGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA--RTAPARVPGLAHVVAIAAGSDHALA 866
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G ++ V P V+ L + VV A G+ + + +G
Sbjct: 867 VRADGTVWAWGANGSGQLGDGTTTSRAV--PMQVKEL--VDVVAVAGGSGHSLAVRADGT 922
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +LG T + P + TL + IA+G + LALA G V++
Sbjct: 923 VWAWGANGSGQLGDGTTTSRTLP-VFVSTLSGVQA--IASGAQHSLALA---EGGVVWAW 976
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P ++ L +Q +V A ++ G+V +WG G
Sbjct: 977 GANGSGQLGDGTTTSRTRP--VQVSGLSGVQGLVAGA---SFSLALTPGKVWSWGNNSAG 1031
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
LG G S P L+ A+ + G T V+ D S+G
Sbjct: 1032 QLGDGTLNSRSQPGAGPTLSSFVAL--SAGAQHTVVLRSDDSFLSWGT 1077
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
QAIA G HS+A+ GVV+++G+N SGQLG GTT RP + L G++ + AGA
Sbjct: 955 QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGL--VAGAS 1012
Query: 208 RTMLISDAGQVYAFGKDSFGE 228
++ ++ G+V+++G +S G+
Sbjct: 1013 FSLALTP-GKVWSWGNNSAGQ 1032
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 68/168 (40%), Gaps = 24/168 (14%)
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+P +AAG H+ V G V WG G LG G+ S P V L V A VA G
Sbjct: 49 RPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTA--VAAG 106
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
+ + + E+G V+++G LG DG R P V L V
Sbjct: 107 NTHSMALREEGTVWTWGTNTDGQLG-----DGVSQRS----VPAQVAGLTGVTAIAAG-- 155
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
N H+ AL G ++A+G GQLG + T R P +V
Sbjct: 156 -------NLHSLALIN-GAVWAWGNNTTGQLGD---GSSTSRSTPAKV 192
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ + +YS+G N GQLG G+ + +E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGG 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G ++ +G++ FG + G+ + P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ ++V P + + NI V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS +++K P +++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 9/295 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D GQV+++G + G+ + + P+ ++SL +I +VQ A G+ + LS+E +
Sbjct: 100 NDKGQVFSWGHAAHGQIGVSI-AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
Y++ +LG +E + +L IP IAAG + AL SG A++ G
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFGWG 215
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG TD P L++ L + + + + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDETDRSDPALLK--SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 274 LGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 32/358 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR + G T + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 284
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ A ++G
Sbjct: 64 GQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIG 117
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 343
+ + + +L +I +VQ+A G+ + LAL+ + + +YS G G+LG GS
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSE 174
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ E PR I+ L + +AAG H+ + G + WG ++G LG +E S
Sbjct: 175 KRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P ++++L K I++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 520
+VT QI+ HT A SG++Y+FG G GQLGI +N+
Sbjct: 293 GNIVT----------QIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGIGSTSNK 335
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG V+S+G + GQ+G E+ R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +Y++G++ +G+ G + K ++P+ ++SL I A G + L+ G
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRK-ESAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + +P LL +L + ++ I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDETDRSDP-ALLKSLRSQKIIYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ + P +V+
Sbjct: 323 GNGQLGIGSTSNKKSPSMVK 342
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAA 256
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 270
++ G V+ FG +G + G +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSG 314
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGIGSTSNKKSPSMVKGN 344
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 162/351 (46%), Gaps = 28/351 (7%)
Query: 166 VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
+Y++G + +LG GT ++ +P I+ + I Q A G G T+++ + G +++FG +
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
+G+ G + + + + + SL N + A G + +A L G V+T+ G + RLG
Sbjct: 72 QYGQLGNGTKVDSPLDASRDISSLSNKLIA-VACGRYHSAALDVNGTVFTWGGGKNGRLG 130
Query: 285 HHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
H ND + + + ++P +I GY A+ + +Y+ G G G+LG GS
Sbjct: 131 H----NDEQTRTIPCRITHLPRAHKIFCGYHITAAI----TDDGLYTWGWGEHGQLGQGS 182
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECES 402
D P+ + F NL +A G H V + G V TWG +G LG G E S
Sbjct: 183 LEDSYGPKKV-IFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS 241
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P ++ +L + VA GD + V+ G ++++GCG GH D
Sbjct: 242 SPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCD-------- 293
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P LV SL V + + + T AL++ +Y FG GQLG
Sbjct: 294 MPFLVESL-------VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 12/300 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGA 206
Q G GH++ + G ++SFG N GQLG+GT + R I SL ++I A G
Sbjct: 48 QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGR 106
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ + G V+ +G G + + T+ + P + L + G TA +
Sbjct: 107 YHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTI--PCRITHLPRAHKI--FCGYHITAAI 162
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G +YT+ WG +LG + + P ++ N+ + Q+A G + L +
Sbjct: 163 TDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLV---RTESG 218
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VY+ G G+LG G R +E + + L + VAAG H+A V G + TWG
Sbjct: 219 DVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWG 277
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G GHG+ +P +V++L V + V G T +S+D D+Y FG LG
Sbjct: 278 CGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+YT+ + RLG +D L+ EN + Q+A G + L L ++S
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLL---EDGCLHSF 68
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG+G++ D + L N + + VA G +H+A + +G V TWG G+ G
Sbjct: 69 GYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGGKNG 127
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGH +E+ ++P + L +A + G + T +++DG +Y++G GE LG ++
Sbjct: 128 RLGHNDEQTRTIPCRITHL--PRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLE 184
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
D G + L S +R H TESG +Y +G+ + GQ
Sbjct: 185 DSYGPKKVIFDDANLAISQLACGDR--------------HCLVRTESGDVYTWGSNEFGQ 230
Query: 512 LGIELVN 518
LGI N
Sbjct: 231 LGIGRYN 237
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 206
SQ G H + T G VY++GSN GQLG G E + P + SL G+ + AAG
Sbjct: 202 SQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGD 261
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +++ G ++ +G + G+ +G P LVESL +F+++ G+ FT L
Sbjct: 262 RHSAAVTNTGSLFTWGCGAEGQCGHGDYND--CDMPFLVESLVGVFILKVFCGHNFTVAL 319
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
S++ +Y F + +LG ++ + P L ++ + +C L
Sbjct: 320 SKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTIDITCGHFHCTL 369
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ + +YS+G N GQLG G+ + +E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGG 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G ++ +G++ FG + G+ + P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ ++V P + + NI V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
+YS G G G+LG GS +++K P +++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 9/295 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D GQV+++G + G+ + + P+ ++SL +I +VQ A G+ + LS+E +
Sbjct: 100 NDKGQVFSWGHAAHGQIGVSI-AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
Y++ +LG +E + +L IP IAAG + AL SG A++ G
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFGWG 215
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG TD P L++ L + + + + G H A + ++G V T+G G YG
Sbjct: 216 RNKFGQLGLNDETDRSDPALLK--SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 274 LGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 32/358 (8%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR + G T + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 284
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ A ++G
Sbjct: 64 GQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIG 117
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 343
+ + + +L +I +VQ+A G+ + LAL+ + + +YS G G+LG GS
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSE 174
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ E PR I+ L + +AAG H+ + G + WG ++G LG +E S
Sbjct: 175 KRKESAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P ++++L K I++ G+ T ++++G V++FG G LGHN+ + R L
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 520
+VT QI+ HT A SG++Y+FG G GQLGI +N+
Sbjct: 293 GNIVT----------QIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGIGSTSNK 335
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG V+S+G + GQ+G E+ R PR I+SL I+I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +Y++G++ +G+ G + K ++P+ ++SL I A G + L+ G
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRK-ESAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + +P LL +L + ++ I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLGLNDETDRSDP-ALLKSLRSQKIIYICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ +A G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ + P +V+
Sbjct: 323 GNGQLGIGSTSNKKSPSMVK 342
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAA 256
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 270
++ G V+ FG +G + G +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSG 314
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGIGSTSNKKSPSMVKGN 344
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 148/291 (50%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + G LGHG W P+ I L+GI + A G T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHT 427
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG +G +G+ VT P+ VESLK + V+AA G + TA +
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEV 485
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + L + +++ G+ +
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP-TCVAALVDPNFCRVSCGHSMTV 544
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL SG VY++G + G+LG+ D K P +E +L +A GA+H AV+
Sbjct: 545 ALTT--SGH-VYTMGSPVYGQLGN-PHADGKVPVRVEG-KLSKSFVEEIACGAYHVAVLT 599
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 150/341 (43%), Gaps = 38/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+++ +G++S G +GV V P+LV++
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSD--VLQPKLVDA 356
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N + + G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 357 LGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIH 416
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V IA G + + S +++ G G G LGHG R PR +E L L+ V
Sbjct: 417 VSSIACGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRGSVTMPREVES--LKGLRTVR 471
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG++E + VP V AL D
Sbjct: 472 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP 531
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
V+ G T ++ G VY+ G LG N HA+ P V
Sbjct: 532 NFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPVRV------ 576
Query: 474 NERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + S I A H LT ++Y +G G G+LG
Sbjct: 577 -EGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 34/305 (11%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P+ +ES + V A G A+++++G ++T+ + RLGH + + ++P L+ L
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPK-LVDAL 357
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
N + ++ G + A+ + + G G LGHG+ P+ I L +
Sbjct: 358 GNTNIELVSCGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLEGI 415
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+A G WH AVV G++ T+G G +G LGHG+ ++P+ V++L ++ + A G
Sbjct: 416 HVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACG 475
Query: 422 DYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
+ T V E G ++++G G+ LGH G++ L P V +
Sbjct: 476 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKETK-LVPTCVAA 527
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
L V+ ++S +S+ T ALT SG +Y G+ GQLG N + P RV
Sbjct: 528 L--VDPNFCRVSCGHSM-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPVRV 576
Query: 530 DIDLS 534
+ LS
Sbjct: 577 EGKLS 581
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 23/254 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++AA G
Sbjct: 418 SSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVW 477
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G G +G + TKLV P V +L + +
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV--PTCVAALVDPNFCR 535
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G+ T L+ G VYT +LG+ V P + G L V +IA G +
Sbjct: 536 VSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PVRVEGKLSKSFVEEIACGAYH 594
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 595 VAVLT---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAIC 651
Query: 371 WHAAVVGQDGRVCT 384
H V G D +C+
Sbjct: 652 LHKWVSGFDQSMCS 665
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ D P+ +E +L++Q + A G HAA+V + G + TWG G LGHG +
Sbjct: 293 KMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQ 350
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PK+V AL + V+ G+Y T V+ GD+Y++G G +N G GN ++ +
Sbjct: 351 PKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGT-----YNFGLLGHGNEVSHWIP 405
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K++N + I +++ HT +T +G+L+ FG G G LG
Sbjct: 406 -------KKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLG 448
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 170/364 (46%), Gaps = 41/364 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A S G V+++GSN SGQLG GTT P ++ L G+ + AAG ++
Sbjct: 403 AGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGLSGV--VAVAAGFDHSLA 460
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +++G+ G +LV V+ L + V A G+ + + +G
Sbjct: 461 LRSDGSVWAWGSNAYGQLGEGTTTNRLVP----VQVLSGVVAVAA--GSNHSLAVRSDGT 514
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+T WG++ +LG T N + P + G V +AAG + LA+ S V+
Sbjct: 515 VWT--WGSNLYGQLGDGTTSNRLVPVQVQGLSG---VAAVAAGSFHSLAVHSDGS---VW 566
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G+ ++ P + V VAAG +H+ VV DG V TWG
Sbjct: 567 AWGSNSSGELGDGTTSNRLVPGRVPGLS----GGVAVAAGGFHSLVVRSDGTVWTWGSNS 622
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G SVP VQ L+ V A+ G+ + V DG V+++G LG
Sbjct: 623 FGELGDGTTTSRSVPVQVQGLSGVVAVDA--GNSHSLAVRSDGTVWTWGYNSYGQLG--- 677
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG R + P V L V +++ H + G ++A+G
Sbjct: 678 --DGTTTRRS---VPVQVPGLSGV------VAMATGAL---HPLVVRSDGTVWAWGYNSF 723
Query: 510 GQLG 513
GQLG
Sbjct: 724 GQLG 727
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 20/298 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V+++GSN+ GQLG GTT R P++ L G+ + AAG+ ++
Sbjct: 453 AGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTN--RLVPVQVLSGV--VAVAAGSNHSLA 508
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G + +G+ G +LV P V+ L + V A G+F + + +G
Sbjct: 509 VRSDGTVWTWGSNLYGQLGDGTTSNRLV--PVQVQGLSGVAAVAA--GSFHSLAVHSDGS 564
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + LG T N + P + G + V AAG + L + + V++
Sbjct: 565 VWAWGSNSSGELGDGTTSNRLVPGRVPGLSGGVAV---AAGGFHSLVVRSDGT---VWTW 618
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P ++ + V V AG H+ V DG V TWG+ YG
Sbjct: 619 GSNSFGELGDGTTTSRSVPVQVQGLSGV----VAVDAGNSHSLAVRSDGTVWTWGYNSYG 674
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
LG G SVP V L+ V A+ ATG VV DG V+++G LG+ +
Sbjct: 675 QLGDGTTTRRSVPVQVPGLSGVVAM--ATGALHPLVVRSDGTVWAWGYNSFGQLGNGS 730
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 176/380 (46%), Gaps = 42/380 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ G V++ GSN GQLG GTT P + L G ++ AAG+ ++
Sbjct: 53 AGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGLSG--VVAVAAGSSHSLA 110
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G T + +P V+ L VV A G+ ++ + +G
Sbjct: 111 VRHDGTVWAWGSNSDGQLGDGT--TTMRLTPVRVQGLSG--VVSVAAGSSYSLAVRSDGT 166
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T N + P + G VV +AAG + LA+ S V+
Sbjct: 167 VW--AWGSNFSGQLGDGTTSNRLVPVQVPGLSG---VVSVAAGSSHSLAVLSDGS---VW 218
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G++ + P + + A H+ V DG V TWG
Sbjct: 219 AWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAA----HSLAVRSDGTVWTWGANS 274
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G + VP VQ L+ V A V G Y + + DG V+++G S LG
Sbjct: 275 FGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVWAWGHNSSGQLGD-- 330
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
D +R V QV +++T ++H+ A+ G ++A+G+
Sbjct: 331 --DSSTSRSVPV----------QVRGLSGGMAVTAG---SSHSLAVGSDGTVWAWGSNFS 375
Query: 510 GQLGIELVNNQTERGNPERV 529
G+ G NN R +P +V
Sbjct: 376 GERGEGTTNN---RASPVQV 392
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 169/372 (45%), Gaps = 37/372 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV G V+++GSNS GQLG GTT P ++ L G ++ AAG+ ++
Sbjct: 103 AGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLA 160
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G +LV P V L + V A + AVLS +G
Sbjct: 161 VRSDGTVWAWGSNFSGQLGDGTTSNRLV--PVQVPGLSGVVSVAAGSSHSL-AVLS-DGS 216
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T+ N + P + G L + V A + +LA + G V++
Sbjct: 217 VWAWGANSSGQLGDGTKINRLVPVQVPG-LSGVVAVAAGAAH----SLAVRSDGT-VWTW 270
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA-AGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+++D P ++ L VV + G++H+ + DG V WG
Sbjct: 271 GANSFGQLGDGTKSDRLVPVRVQ-----GLSGVVASDVGSYHSLALRSDGSVWAWGHNSS 325
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG + SVP V+ L+ + V G + V DG V+++G S G
Sbjct: 326 GQLGDDSSTSRSVPVQVRGLS--GGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERG---- 379
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+G N A +P V L + H+ A G ++A+G+ D G
Sbjct: 380 -EGTTNNRA---SPVQVQGLGGGVAVAAGFN---------HSLAARSDGSVWAWGSNDSG 426
Query: 511 QLGIELVNNQTE 522
QLG N T
Sbjct: 427 QLGDGTTRNSTS 438
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 166/367 (45%), Gaps = 41/367 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV S G V+++G+NS GQLG GT + P ++ L G+ + + G+ ++ +
Sbjct: 257 HSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGV--VASDVGSYHSLALRSD 314
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G +S G+ G + + P V L V A G+ + + +G V+
Sbjct: 315 GSVWAWGHNSSGQ--LGDDSSTSRSVPVQVRGLSGGMAVTA--GSSHSLAVGSDGTVW-- 368
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+WG++ G T N P + G + V AAG+ + LA S V++ G
Sbjct: 369 AWGSNFSGERGEGTTNNRASPVQVQGLGGGVAV---AAGFNHSLAARSDGS---VWAWGS 422
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG G+ + P ++ + V VAAG H+ + DG V WG YG L
Sbjct: 423 NDSGQLGDGTTRNSTSPVQVQGLSGV----VAVAAGFDHSLALRSDGSVWAWGSNAYGQL 478
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G VP VQ L+ V A VA G + V DG V+++G LG DG
Sbjct: 479 GEGTTTNRLVP--VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLG-----DG 529
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+N L P V L V V S H+ A+ G ++A+G+ G+LG
Sbjct: 530 T---TSNRLVPVQVQGLSGV-AAVAAGSF--------HSLAVHSDGSVWAWGSNSSGELG 577
Query: 514 IELVNNQ 520
+N+
Sbjct: 578 DGTTSNR 584
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 167/369 (45%), Gaps = 37/369 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++G+NSSGQLG GT P + L ++ AAGA ++
Sbjct: 203 AGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLS--GVVAVAAGAAHSLA 260
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G +SFG+ G + +LV P V+ L VV + +G++ + L +G
Sbjct: 261 VRSDGTVWTWGANSFGQLGDGTKSDRLV--PVRVQGLSG--VVASDVGSYHSLALRSDGS 316
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG + + P + G + V AG + LA+ + V++
Sbjct: 317 VWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVT---AGSSHSLAVGSDGT---VWAW 370
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+ G G+ + P Q Q L V VAAG H+ DG V WG G
Sbjct: 371 GSNFSGERGEGTTNNRASP---VQVQGLG-GGVAVAAGFNHSLAARSDGSVWAWGSNDSG 426
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G + P VQ L+ V A VA G + + DG V+++G LG
Sbjct: 427 QLGDGTTRNSTSPVQVQGLSGVVA--VAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT- 483
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
N L P QV VV ++ ++ H+ A+ G ++ +G+ GQ
Sbjct: 484 -------TNRLVP------VQVLSGVVAVAAGSN-----HSLAVRSDGTVWTWGSNLYGQ 525
Query: 512 LGIELVNNQ 520
LG +N+
Sbjct: 526 LGDGTTSNR 534
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 28/191 (14%)
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
VGCGL TDE + L + +AAG+ ++ + DG V G
Sbjct: 23 VGCGL--------PTDESAEQTSRGAPLRDAPSRARLAAGSSYSLALRPDGTVWATGSND 74
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G S P V L+ V A VA G + V DG V+++G LG
Sbjct: 75 LGQLGDGTTTNHSAPVQVPGLSGVVA--VAAGSSHSLAVRHDGTVWAWGSNSDGQLG--- 129
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG LTP V L VV ++ +S ++ A+ G ++A+G+
Sbjct: 130 --DGTTTMR---LTPVRVQGLSG----VVSVAAGSS-----YSLAVRSDGTVWAWGSNFS 175
Query: 510 GQLGIELVNNQ 520
GQLG +N+
Sbjct: 176 GQLGDGTTSNR 186
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V + G F T ++ G + F+WG N LG TE + P + G LE
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + A S +Y+ G G G LGHG R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417
Query: 364 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ VA G WH+A V Q G ++ TWG G LGHG++E VPK VQAL +
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+A G T ++ G V++ G + LG N +DG+ P LV +
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLA 527
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS S H LT ++Y +G G G+LG
Sbjct: 528 SELVEEISCGAS-----HVTVLTSRSEVYTWGMGANGRLG 562
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 26/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G ++++G S G LG GT W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
L + +G++Y FG +FG +G + T + P+ VE+L ++ A G + +A
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433
Query: 265 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
V+S+ ++YT+ G+ RLGH + + P + LE Q+A G+ +
Sbjct: 434 TNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YNFHQLACGHNMTV 490
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
ALA + V+++G G+LG+ ++D K P L+ Q +L + ++ GA H V+
Sbjct: 491 ALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLT 545
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 546 SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V P+ +ES + V Q A G A+ +R+G V+T WG + RLGH T+ + P
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRP-K 300
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
L+ +L V I+ G + A+ G Y+VG LG G+ P+
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKK 355
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ L LQ + VA G+WH+A+ G++ T+G G +G LGHG+ E + PK V+AL+
Sbjct: 356 VSG-PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSG 414
Query: 413 VKAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
K I VA G + + + E +Y++G G+ LGH G++ L
Sbjct: 415 FKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-L 466
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L + N Q++ +++ T AL SG+++ G+ GQLG
Sbjct: 467 VPKCVQALLEYN--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +Y+FG + G LGHG E P+ + +L G + I+ A G + I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + ++Y +G +G + +LV P+ V++L Q A G+
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYNFHQLACGHNM 488
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ GRV+T ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S VY+ G G G+LGHG D K P L+E + +++ + + H V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 409
D VCT + R+ C G C S KV++A
Sbjct: 605 ADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKA 645
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 23/334 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H T +G V+++G G+LGHGT + RP+ + SL + + G
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVL 266
T ++ +G ++ +G S+ G P+ V L+ + V+ A G++ +A+
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 320
+ G++YTF G LGH P + L +++A G + A+
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKE-VEALSGFKTIKVACGIWHSAAIVEVTNQT 437
Query: 321 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVG 377
+Y+ G G +LGHG +K PRL+ + LL +A G +
Sbjct: 438 GANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
GRV T G G LG+ + + V L ++ G V++ +VY++
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTW 553
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G G + LGH + D + P LV +LK
Sbjct: 554 GMGANGRLGHGDLKDRK--------KPCLVEALK 579
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 20/310 (6%)
Query: 143 CRRENS-------QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 195
CRR S QA G HS+ + S G V+S G+NS GQLG ++ RP I++L+
Sbjct: 28 CRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALE 87
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVV 254
I+ + G ++ I G+V+++G S G + G++ K ++S P+ ++ L + ++
Sbjct: 88 TQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG--QLGIREFKKLSSIPKKIDELSSFKII 145
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGY 313
Q + G++ + L+++GRV+++ N +LG P+ P + +L+ IP+ Q+AAG
Sbjct: 146 QVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQ-WVKSLDGIPLAQVAAGG 204
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAW 371
+ AL+ SG + Y G G+L + + E+ + +L LQ ++ G
Sbjct: 205 AHSFALSF--SGTS-YGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDE 261
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-E 430
H AV+ QDG+V T+G G LG P+VV + V +A G Y T S
Sbjct: 262 HTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSA--VSFSQIACGSYHTLAYSCT 319
Query: 431 DGDVYSFGCG 440
G V SFGCG
Sbjct: 320 TGQVISFGCG 329
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 40/358 (11%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIR-----SLQGIRIIQAAAGAGRTMLISDAGQVY 219
+ Y +G NSSGQLG + R +R SL ++QAA G ++L+ G V+
Sbjct: 1 MYYCWGDNSSGQLGIPAVPRA-KARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVW 59
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+ G +S G+ G + + P +++L+ +V + G + + +EGRV+++ G+
Sbjct: 60 SCGNNSCGQ--LGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGS 117
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
D +LG + L + ++Q++ G+ + +ALA V+S G G+L
Sbjct: 118 DGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALA---QDGRVFSWGKNNHGQL 174
Query: 340 GHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC----LG 394
G G + P+ ++ + L VAAG H+ + G ++GWGR L
Sbjct: 175 GLGENVPSQASPQWVKSLDGIPL--AQVAAGGAHSFALSFSG--TSYGWGRNNAGQLALS 230
Query: 395 HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
E E + P + L ++ +++ GD T V+++DG V++FG +S LG I+
Sbjct: 231 GKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISG 290
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDK 509
+G PQ+V S +S + + HT A + +G++ +FG G +
Sbjct: 291 MKG--------PQVVDS---------AVSFSQIACGSYHTLAYSCTTGQVISFGCGSQ 331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 33/281 (11%)
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-------RLGHHTEPNDVEPHPLLG 299
SL N ++QAA G + +L +G V+ S GN++ R H P ++
Sbjct: 33 SLGNQTLLQAACGERHSLLLLSDGTVW--SCGNNSCGQLGRKRCQKHGRPAQIQ------ 84
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQL 358
LE +V ++ G + LA+ C+ V+S G G G+LG + P+ I++ L
Sbjct: 85 ALETQDIVSVSCGKEHSLAI-CKEG--RVFSWGSGSDGQLGIREFKKLSSIPKKIDE--L 139
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIH 417
+ + + V+ G +H+ + QDGRV +WG +G LG G N ++ P+ V++L+ +
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQ 199
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
VA G +F +S G Y +G + L G+ + P + LK++ +V
Sbjct: 200 VAAGGAHSFALSFSGTSYGWGRNNAGQLA----LSGKKESAEQISKPFSIGELKRL--QV 253
Query: 478 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
IS + HT LT+ GK++ FG+ D GQLG +L++
Sbjct: 254 TYISCGDE-----HTAVLTQDGKVFTFGSNDSGQLGRQLIS 289
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 180/365 (49%), Gaps = 43/365 (11%)
Query: 146 ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+N AIA G H++A+ G V+S+G+N+ GQLG+GT + + P ++ L + + A
Sbjct: 393 DNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLN--KAVLVEA 450
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G+ ++ + G V+ +G F E+ + + TK + SP ++ K + + A G +
Sbjct: 451 GSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 323
VL ++G ++ GND T+ + V L L+NI V+ IAAGY + LA+
Sbjct: 508 VLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG 564
Query: 324 SGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQDG 380
+ V+S G L K EK+ E+ ++ L VV VAAG +H+ + +DG
Sbjct: 565 T---VWSWGDTNLDNK--------EKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG 613
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V +WG+ YG LG+G E VP V+ LN+V AI A GDY + + +DG V+ +G
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGSN 671
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG I P V L + VV I+ ++ H+ AL + G
Sbjct: 672 IRGQLGRRNIEFST--------VPLKVEKL----DNVVAIAAGDT-----HSVALKKDGT 714
Query: 501 LYAFG 505
++ +G
Sbjct: 715 VWVWG 719
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 194/444 (43%), Gaps = 92/444 (20%)
Query: 131 LVLRFL---LAGEACCRRENSQAI-----------AGPGHSIAVTSKGVVYSFGSNSSGQ 176
L+ FL L+ +ENS+ + AG H++A+ G V+++G N GQ
Sbjct: 14 LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQ 73
Query: 177 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 236
LG+GT ++ P ++ L+ ++ +AG ++ + G V+ +G ++G+ + V
Sbjct: 74 LGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVY-- 129
Query: 237 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
+ T+P V+ LKNI + A G F+ + +G V+ + N LG + P
Sbjct: 130 RDFTTPVKVKELKNIVAIAA--GWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVK 187
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD---------- 346
+ G + VV ++AG + LAL + V+S G G+LG+ D
Sbjct: 188 VKGLKD---VVAVSAGLYHSLALKRDGT---VWSWGYNEDGELGNRPTEDYTVSVPVRVK 241
Query: 347 --------------------------------EKHPRLIEQF-----QLLNLQPVVVAAG 369
EK+ ++ + + LN + V +AAG
Sbjct: 242 GLSDVIAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLN-KVVAIAAG 300
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H+ + DG V WG YG LG E +P V+ L +V A VA G + ++
Sbjct: 301 YRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLKNVVA--VAAGRLHSVALT 358
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
++G ++++ G+NA GQ R N + L +K + + VV I+ S
Sbjct: 359 KNGTIWAW--------GNNAF--GQLGRENNSFSLNLPYKVKWL-DNVVAIAAGGS---- 403
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
HT A+ G ++++GA +KGQLG
Sbjct: 404 -HTLAIKRDGTVWSWGANNKGQLG 426
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 142/300 (47%), Gaps = 25/300 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+AV S G V+++G N+ G+LG G+ + P ++ L+ ++ +AG ++
Sbjct: 149 AGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLK--DVVAVSAGLYHSLA 206
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+++G + GE V+ P V+ L ++ + A G F + L+++G
Sbjct: 207 LKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISA--GGFHSIALNKDGA 264
Query: 272 VYTFSWGNDARLGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+ WG G E N D P+ N VV IAAGY + +AL + V
Sbjct: 265 VWI--WG-----GGIIEKNGKIDNSYIPVRIRWLN-KVVAIAAGYRHSIALKDDGT---V 313
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G LG S E H L Q + L V VAAG H+ + ++G + WG
Sbjct: 314 WVWGHNSYGVLG--SNVGE-HSFLPVQVKGLK-NVVAVAAGRLHSVALTKNGTIWAWGNN 369
Query: 389 RYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+G LG N ++P V+ L++V AI A G T + DG V+S+G LG+
Sbjct: 370 AFGQLGRENNSFSLNLPYKVKWLDNVVAI--AAGGSHTLAIKRDGTVWSWGANNKGQLGN 427
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 21/293 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+S+G N G+LG+ TE+ P+R +I +AG ++
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIA 258
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G V+ +G E + + + P + L VV A G + L +G
Sbjct: 259 LNKDGAVWIWGGGII-EKNGKIDNSYI---PVRIRWLNK--VVAIAAGYRHSIALKDDGT 312
Query: 272 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ WG+++ LG + + P + G L+N VV +AAG + +AL + ++
Sbjct: 313 VWV--WGHNSYGVLGSNVGEHSFLPVQVKG-LKN--VVAVAAGRLHSVALTKNGT---IW 364
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG + L + + L+ V +AAG H + +DG V +WG
Sbjct: 365 AWGNNAFGQLGR--ENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANN 421
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
G LG+G + +P V+ LN KA+ V G + V +DG V+ +G ES
Sbjct: 422 KGQLGNGTYKSSYIPTCVKGLN--KAVLVEAGSQHSLAVDKDGTVWVWGFIES 472
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
S + K+ ++ Q N + + AG+ H + DG V WG+ +G LG+G +
Sbjct: 24 SNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSC 83
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+P V+ L DV A V+ G + + + +DG V+ + GH + + + +
Sbjct: 84 IPVRVKGLKDVVA--VSAGTFHSLALKKDGSVWIW--------GHTNYGQRKSDVYRDFT 133
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
TP V LK +V I+ W+ + A+ G ++A+G + G+LGI
Sbjct: 134 TPVKVKELKN----IVAIAAG----WD-FSLAVGSDGSVWAWGINNHGELGI 176
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 173/349 (49%), Gaps = 26/349 (7%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
+G N QLG + P +L + ++Q A G+ ++ G+VYA G+ + G
Sbjct: 2 WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + V P+ + +L + V + A+ G L+ +G+V+ + G+D +LGH
Sbjct: 62 LGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHF 120
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ N +P L+ L+ + IA G + AL S +Y+ G G G+LGHG T
Sbjct: 121 SRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTT 176
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVP 404
+ P++++ LL + + VA G+ A + +G V +WG G +G LG G E ++P
Sbjct: 177 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 234
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+ ++ LN + G + +++ G V+++G G+ LGH + +V P
Sbjct: 235 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKP 286
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 287 QVVEGLR--GKKIVHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 328
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 14/298 (4%)
Query: 147 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAA 204
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L + + A
Sbjct: 31 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 90
Query: 205 GAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G T L D G+V+ +G+ + + G P+L+E+LK + A G+
Sbjct: 91 HSGGRHATALTVD-GKVFWWGEGD--DGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 147
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 148 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP-KMVKVLLGHRVIQVACGSRDAQTLAL 206
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G
Sbjct: 207 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 262
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 263 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 320
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L+G
Sbjct: 240 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 294
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
+I+ A GA + ++D+GQVYA+G + G+
Sbjct: 295 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 326
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 153/310 (49%), Gaps = 13/310 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + + G HS+ + G VY+ GSNS GQLGH + P + +L +I +
Sbjct: 33 RGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHN--KPGITPEFVGALDTQKITLVSC 90
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +++ GQV+A+G G+ G T V P+L++ L + + Q GN
Sbjct: 91 GQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETA-VRIPRLIKRLCDHRIAQVMCGNQHCI 149
Query: 265 VLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS++G+++T+ +LG EP+ + P P L +L IP+ +I AG + AL+
Sbjct: 150 ALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQP-LKSLAGIPLAKITAGGDHSFALSL-- 206
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
SG AV+ G G+LG D P I + L Q VV ++ G H A + +DG +
Sbjct: 207 SG-AVFGWGKNKAGQLGLNDIQDRAVPCHI---KFLRSQKVVHISCGEEHTAALTKDGGL 262
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGE 441
T+G G +G LGHG+ E +P+ V L + + G + T + G VY+FGC
Sbjct: 263 FTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNS 322
Query: 442 SASLGHNAIA 451
LG ++
Sbjct: 323 HGQLGTGVLS 332
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 138/275 (50%), Gaps = 21/275 (7%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 201
C +Q + G H IA++ G ++++G N+SGQLG G E + P+P++SL GI + +
Sbjct: 134 CDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAK 193
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
AG + +S +G V+ +GK+ G + G+ + P ++ L++ VV + G
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNKAG--QLGLNDIQDRAVPCHIKFLRSQKVVHISCGEE 251
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
TA L+++G ++TF G+ +LGH + N++ P +L L V QI G + LA A
Sbjct: 252 HTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL-ELMGTEVSQITCGRHHTLAFA- 309
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
PS VY+ GC G+LG G + +K P ++ L +G+ H V
Sbjct: 310 -PSSGGVYAFGCNSHGQLGTGVLSADKSPYPLKTSFL---------SGSIHGTVTK---- 355
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
T G G + L + N++ P+ + +N AI
Sbjct: 356 -ITCG-GDHSFLLYSNDQNSEYPEDFRVINISNAI 388
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 27/348 (7%)
Query: 169 FGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
+G GQLG G + PR G + + G ++ + G VY G +S G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+ + G +P+ V +L + + G + ++ +G+V+ + G + +LG T
Sbjct: 64 QLGHNKPGI----TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGT 119
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
V L+ L + + Q+ G + +AL+ +++ G G+LG G
Sbjct: 120 TETAVRIPRLIKRLCDHRIAQVMCGNQHCIALS---KDGQLFTWGQNTSGQLGLGKGEPS 176
Query: 348 K-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
K P+ ++ + L + AG H+ + G V WG + G LG + + +VP
Sbjct: 177 KLFPQPLKSLAGIPLAKI--TAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCH 234
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
++ L K +H++ G+ T +++DG +++FG G LGH + AN L P+
Sbjct: 235 IKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGST--------ANELLPRR 286
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
V L+ + V QI+ HT A SG +YAFG GQLG
Sbjct: 287 V--LELMGTEVSQITCGRH-----HTLAFAPSSGGVYAFGCNSHGQLG 327
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%), Gaps = 25/292 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV +G V+++G+ GQLG GTTE R PR I+ L RI Q G +
Sbjct: 91 GQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIA 150
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S GQ++ +G+++ G+ G +G PQ ++SL I + + G + LS G
Sbjct: 151 LSKDGQLFTWGQNTSGQLGLG-KGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGA 209
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGM 326
V F WG + +LG ND++ + + L + VV I+ G + AL
Sbjct: 210 V--FGWGKNKAGQLG----LNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALT---KDG 260
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 385
+++ G G G+LGHGS +E PR + +L+ + + G H A G V +
Sbjct: 261 GLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGVYAF 318
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIH------VATGDYTTFVVSED 431
G +G LG G + P ++ +IH GD++ + S D
Sbjct: 319 GCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSND 370
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-LLNLQPV-VVAAGAWHAAVVGQDGRVCT 384
+VY+ G G+LGH P + +F L+ Q + +V+ G H+ V + G+V
Sbjct: 53 SVYTCGSNSCGQLGHNK------PGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFA 106
Query: 385 WGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG G G LG G E +P++++ L D + V G+ +S+DG ++++G S
Sbjct: 107 WGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG + G+ ++ L PQ + SL I L H+FAL+ SG ++
Sbjct: 167 QLG---LGKGEPSK----LFPQPLKSL-------AGIPLAKITAGGDHSFALSLSGAVFG 212
Query: 504 FGAGDKGQLGIELVNNQTERGNP 526
+G GQLG+ N+ +R P
Sbjct: 213 WGKNKAGQLGL---NDIQDRAVP 232
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 337 GKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG G R PR F L+ +V G H+ + DG V T G G LGH
Sbjct: 10 GQLGIGVERNPMFEPRNCNVFTGRGLKEIV--CGGQHSVFLLHDGSVYTCGSNSCGQLGH 67
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
P+ V AL+ K V+ G + V+E G V+++G GE LG G
Sbjct: 68 NKPGI--TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLG-------LG 118
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
V P+L+ L + R+ Q+ + N H AL++ G+L+ +G GQLG+
Sbjct: 119 TTETAVRIPRLIKRL--CDHRIAQV-----MCGNQHCIALSKDGQLFTWGQNTSGQLGL 170
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 18/131 (13%)
Query: 385 WGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG + G LG G E P+ + G + + DG VY+ G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGHN +TP+ V +L +++ +S AH+ A+ E G+++A
Sbjct: 64 QLGHNKPG----------ITPEFVGALD--TQKITLVSCGQ-----AHSLAVNEQGQVFA 106
Query: 504 FGAGDKGQLGI 514
+GAG++GQLG+
Sbjct: 107 WGAGEEGQLGL 117
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVES 304
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V + G F T ++ G + F+WG N LG TE + P + G LE
Sbjct: 305 LSLTVVDLISCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + A S +Y+ G G G LGHG R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKT 417
Query: 364 VVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ VA G WH+A V Q G ++ TWG G LGHG++E VPK VQAL +
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY 477
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+A G T ++ G V++ G + LG N +DG+ P LV +
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLA 527
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS S H LT ++Y +G G G+LG
Sbjct: 528 SELVEEISCGAS-----HVTVLTSRSEVYTWGMGANGRLG 562
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 26/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G ++++G S G LG GT W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
L + +G++Y FG +FG +G + T + P+ VE+L ++ A G + +A
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKTIKVACGIWHSAAIVEV 433
Query: 265 -------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
V+S+ ++YT+ G+ RLGH + + P + LE Q+A G+ +
Sbjct: 434 TNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-YDFHQLACGHNMTV 490
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
ALA + V+++G G+LG+ ++D K P L+ Q +L + ++ GA H V+
Sbjct: 491 ALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASELVEEISCGASHVTVLT 545
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 546 SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCI 596
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V P+ +ES + V Q A G A+ +R+G V+T WG + RLGH T+ + P
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRP-K 300
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
L+ +L V I+ G + A+ G Y+VG LG G+ P+
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKK 355
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ L LQ + VA G+WH+A+ G++ T+G G +G LGHG+ E + PK V+AL+
Sbjct: 356 VSG-PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSG 414
Query: 413 VKAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
K I VA G + + + E +Y++G G+ LGH G++ L
Sbjct: 415 FKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-L 466
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ V +L + + Q++ +++ T AL SG+++ G+ GQLG
Sbjct: 467 VPKCVQALLEYD--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +Y+FG + G LGHG E P+ + +L G + I+ A G + I
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAI 430
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + ++Y +G +G + +LV P+ V++L Q A G+
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLV--PKCVQALLEYDFHQLACGHNM 488
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ GRV+T ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 489 TVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT-- 545
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S VY+ G G G+LGHG D K P L+E + +++ + + H V G
Sbjct: 546 -SRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSG 604
Query: 378 QDGRVCT 384
D VCT
Sbjct: 605 ADQSVCT 611
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 23/334 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H T +G V+++G G+LGHGT + RP+ + SL + + G
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVL 266
T ++ +G ++ +G S+ G P+ V L+ + V+ A G++ +A+
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALT 378
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 320
+ G++YTF G LGH P + L +++A G + A+
Sbjct: 379 TSSGKLYTFGDGTFGVLGHGDRETLAYPKE-VEALSGFKTIKVACGIWHSAAIVEVTNQT 437
Query: 321 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVG 377
+Y+ G G +LGHG +K PRL+ + LL +A G +
Sbjct: 438 GANVMSKKLYTWGDGDKNRLGHG----DKEPRLVPKCVQALLEYDFHQLACGHNMTVALA 493
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
GRV T G G LG+ + + V L ++ G V++ +VY++
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTW 553
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G G + LGH + D + P LV +LK
Sbjct: 554 GMGANGRLGHGDLKDRK--------KPCLVEALK 579
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 28/311 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S +AG +S+A+ G ++++G N G LGH T+ E P + +L G++I+QAA G
Sbjct: 44 SAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGG 103
Query: 207 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGN 260
+ + D G+ YA+G + +G E E GT+ + P + V Q A G
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGG 163
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYL 316
+ VL++EG V+T+ G P D++ P + G LE + + IA G +
Sbjct: 164 THSVVLTQEGHVWTW--------GQPWPPGDIKNISTPVRVQG-LEQVSM--IAVGAFHN 212
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LAL+ +++ G G+LG G P +E L NL V +AAG WH+A +
Sbjct: 213 LALSVD---RILWAWGNNEYGQLGIGDTQPRSQPIRVE--GLSNLSLVDIAAGGWHSAAL 267
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
++G V WG G +G LG G+++ VP VQ L + V+ G + V++ DG ++
Sbjct: 268 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIF 327
Query: 436 SFGCGESASLG 446
S+G G+ LG
Sbjct: 328 SYGRGDHGRLG 338
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 42/378 (11%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG G +E+ R R I +L + AG+ ++ I D G ++ +G +
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQ 69
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK +SP V++L + +VQAAIG + + +GR Y +WG +
Sbjct: 70 RGTLGHPPE-TKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAY--AWGGNEYGQC 126
Query: 286 HTEPNDVE----------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
EP E P P L+ + V Q+AAG + + L + V++
Sbjct: 127 GEEPERKEDGTRALRRDIPIPQRCALK-LKVRQVAAGGTHSVVLTQEGH---VWT----W 178
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G G + P ++ + +++ +A GA+H + D + WG YG LG
Sbjct: 179 GQPWPPGDIKNISTPVRVQGLEQVSM----IAVGAFHNLALSVDRILWAWGNNEYGQLGI 234
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + S P V+ L+++ + +A G + + ++++G+VY++G GE LG G
Sbjct: 235 GDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGF-------G 287
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+ ++ + P V L E +VQ+S + H+ LT G+++++G GD G+LG
Sbjct: 288 DDKSSHMVPLQVQLL--AGEDIVQVSCGGT-----HSVVLTSDGRIFSYGRGDHGRLGD- 339
Query: 516 LVNNQTERGNPERVDIDL 533
+ G+P V I+L
Sbjct: 340 --GRKVTTGHPMEVPINL 355
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 31/272 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--------PIRSLQGIRII 200
QA G H +AV KG Y++G N GQ G +E R P R +++
Sbjct: 98 QAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR 157
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+ +G+ + K +++P V+ L+ + ++ A+G
Sbjct: 158 QVAAGGTHSVVLTQEGHVWTWGQ------PWPPGDIKNISTPVRVQGLEQVSMI--AVGA 209
Query: 261 FFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
F LS + R+ ++WGN+ +LG T+P +P + G L N+ +V IAAG +
Sbjct: 210 FHNLALSVD-RIL-WAWGNNEYGQLGIGDTQPRS-QPIRVEG-LSNLSLVDIAAGGWHSA 265
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV-VAAGAWHAAV 375
AL + VY+ G G G+LG G D+K ++ Q QLL + +V V+ G H+ V
Sbjct: 266 ALTKEGE---VYAWGRGEHGRLGFG---DDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVV 319
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
+ DGR+ ++G G +G LG G + P V
Sbjct: 320 LTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEV 351
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 29/337 (8%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + + I +AA GA T+L+++ G++Y+ G + G+ + V+ PQL+ +
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLP-NKRPQLLTA 396
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 305
L+N + QA G + L+ G+VY SWG++A +LG T+ L+ ++
Sbjct: 397 LENYIITQACCGTAHSLALTNWGQVY--SWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQ 454
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQP 363
VVQIAAG+ + LAL + +Y+ G G+LG G T+EK P L++ L +
Sbjct: 455 VVQIAAGHYHCLALT---NSGELYAWGSNAYGQLGLG-MTNEKVSTPTLVQS--LAGVPI 508
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+A G H+ V + G + WG +G LG + P ++ L + +V+ GD
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDD 568
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ ++ G V++ G G LGH G N N + P++V L + ++ QI+
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGH-----GSCN---NEILPRMVFEL--MGSKITQIACG 618
Query: 484 NSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNN 519
HT A S GK+Y FG GQLGI +V N
Sbjct: 619 RR-----HTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 148/265 (55%), Gaps = 13/265 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 206
+QA G HS+A+T+ G VYS+GSN+ GQLG T T + PR IRS+ +++Q AAG
Sbjct: 403 TQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGH 462
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++++G++YA+G +++G+ G+ K V++P LV+SL + + A G + +
Sbjct: 463 YHCLALTNSGELYAWGSNAYGQLGLGMTNEK-VSTPTLVQSLAGVPIAFIACGGNHSFAV 521
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
S+ G + F WG + +LG + + N + L TL ++ V ++ G + + L +
Sbjct: 522 SKSGAI--FGWGKNTFGQLGLN-DLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLT---A 575
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
G V++ G G G+LGHGS +E PR++ F+L+ + +A G H A V G++
Sbjct: 576 GGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIY 633
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQ 408
+G G LG G + P++V+
Sbjct: 634 GFGLSGVGQLGIGIVGNYNTPQIVR 658
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 20/327 (6%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAA 203
+E ++A G H++ +T+ G +YS G+N GQLGH RP+ + +L+ I QA
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQAC 406
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G ++ +++ GQVY++G ++ G+ T+ + P+L+ S+ VVQ A G++
Sbjct: 407 CGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHC 465
Query: 264 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L+ G +Y +WG++A +LG V L+ +L +P+ IA G + + A
Sbjct: 466 LALTNSGELY--AWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNH--SFAV 521
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG A++ G G+LG + P + + L ++ V+ G + + G
Sbjct: 522 SKSG-AIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVR--YVSCGDDFSVFLTAGGG 578
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 440
V T G G +G LGHG+ E +P++V L K +A G +T V G +Y FG
Sbjct: 579 VFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLS 638
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLV 467
LG + N TPQ+V
Sbjct: 639 GVGQLGIGIV--------GNYNTPQIV 657
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 22/285 (7%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+V P+ ++ + + +AA G T +L+ +G++Y+ + +LGH E + L
Sbjct: 334 MVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQL 393
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 356
L LEN + Q G + LAL + VYS G G+LG + T + PRLI
Sbjct: 394 LTALENYIITQACCGTAHSLALT---NWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR-- 448
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA 415
+ Q V +AAG +H + G + WG YG LG G E S P +VQ+L V
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPI 508
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+A G +F VS+ G ++ +G LG N + Q P + +L+ +
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ--------FPTQLRTLRSLGV 560
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
R V S++ LT G ++ GAG GQLG NN+
Sbjct: 561 RYVSCGDDFSVF-------LTAGGGVFTCGAGTFGQLGHGSCNNE 598
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 156/306 (50%), Gaps = 9/306 (2%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E QA +G HS+ + S G V++ G NS GQLG RP I++L+ + +
Sbjct: 16 EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNV 75
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ G ++ + G+V+A+G S G+ G + +L +P V++L I ++Q + G
Sbjct: 76 DLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMKVKALAGIKIIQVSCG 134
Query: 260 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
++ + LS++G+V FSWGN++ +LG E E + +LE IP+ Q+AAG +
Sbjct: 135 HYHSLALSQDGQV--FSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSF 192
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL+ + S G G+ PR I + L + V ++ G+ H AV+
Sbjct: 193 ALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGV--VYISCGSEHTAVLT 250
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 436
QDG+V T+G G LGHG + P++V+ ++ + + + G Y T V V V S
Sbjct: 251 QDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVS-QIDCGSYHTLVYVYTTRQVIS 309
Query: 437 FGCGES 442
FG G S
Sbjct: 310 FGRGPS 315
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 21/277 (7%)
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G + QAA+G ++L+ G V+A G +S G+ G +G P L+++L+ + V
Sbjct: 20 GAELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDL 77
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 314
+ G + + +GRV+ + G++ +LG E ++ P+ + L I ++Q++ G+
Sbjct: 78 LSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKALAGIKIIQVSCGHY 136
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LAL+ V+S G G+LG G ++ P+ ++ + + L VAAG H+
Sbjct: 137 HSLALS---QDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPL--AQVAAGGAHS 191
Query: 374 AVVGQDGRVCTWGWGRYG--CLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSE 430
+ G WG G L N +S P+ + AL ++ ++++ G T V+++
Sbjct: 192 FALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQ 251
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
DG V++FG S LGH A+ +G PQLV
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKRG--------PQLV 280
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G G+LG K P LI+ + LN+ +++ G H+ V GRV WG
Sbjct: 42 VHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVD--LLSCGKEHSLAVCHKGRVFAWGA 99
Query: 388 GRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LG G +E P V+AL +K I V+ G Y + +S+DG V+S+G LG
Sbjct: 100 GSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLG 159
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G + +PQ V SL+ I L AH+FAL+ SG + +G+
Sbjct: 160 -------LGKEFLSQESPQRVKSLEG-------IPLAQVAAGGAHSFALSLSGTSFGWGS 205
Query: 507 GDKGQLGIELVNNQTERGNPERV 529
+ GQL + N + P +
Sbjct: 206 NNAGQLALSGNNVPVQSYKPRSI 228
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 40/271 (14%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
QAA G + +L +G V+ + +LG P+ P L+ LE + V ++ G
Sbjct: 25 QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPG-LIQALETLNVDLLSCGKE 83
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA------ 368
+ LA+ C V++ G G G+LG G +F+ LN P+ V A
Sbjct: 84 HSLAV-CHKG--RVFAWGAGSEGQLGIG------------EFKELNFTPMKVKALAGIKI 128
Query: 369 -----GAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 422
G +H+ + QDG+V +WG +G LG G E + P+ V++L + VA G
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+F +S G + +G + L + N P+ + +LK++ VV IS
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSG-----NNVPVQSYKPRSIGALKELG--VVYISC 241
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ HT LT+ GK++ FG GQLG
Sbjct: 242 GSE-----HTAVLTQDGKVFTFGDNSSGQLG 267
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 157/341 (46%), Gaps = 39/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + + A G +++ G+V+ +G++S G +GV K V P+LVES
Sbjct: 271 PRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVES 328
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L V A G F T ++ G +YT WG+ LGH T+ + P + G LE
Sbjct: 329 LAMTTVDFIACGEFHTCAVTMAGEIYT--WGDGMHYAGLLGHGTDISHWIPKRISGPLEG 386
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ Q+A+ C A S +++ G G G LGHG+R + +P+ +E L L+
Sbjct: 387 L---QVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVE--SLAGLRT 441
Query: 364 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALID 501
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N ADG+ P LV K
Sbjct: 502 FNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLG-NPYADGK--------VPCLVED-KL 551
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +I+ Y H LT ++Y +G G G+LG
Sbjct: 552 SGESVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 587
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + +G LGHGT W P+ I L+G+++ G T
Sbjct: 340 GEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHT 399
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ GQ++ FG +FG +G + + P+ VESL + + A G + TA +
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGNREN--IAYPKEVESLAGLRTIAVACGVWHTAAVVEV 457
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 458 IVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDFNFHKIACGHSLTVG 516
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V+++G + G+LG+ D K P L+E +L +A GA+H AV+
Sbjct: 517 LTT--SGH-VFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACG 614
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 152/377 (40%), Gaps = 38/377 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG E P+ + SL G+R I A G T +
Sbjct: 395 GPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAV 454
Query: 213 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ G+++ +G +G + +L P V +L + + A G+
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDFNFHKIACGHS 512
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ G V+T +LG+ V P + L V +IA G ++ L
Sbjct: 513 LTVGLTTSGHVFTMGSTVYGQLGNPYADGKV-PCLVEDKLSGESVEEIACGAYHVAVLT- 570
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ + AA H V
Sbjct: 571 --SRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSAAICLHKWVS 628
Query: 377 GQDGRVCT-------WGWGRYGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 424
G + C+ + R+ C G C S + A N K V +T
Sbjct: 629 GSEQSQCSSCRQAFGFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFT 688
Query: 425 TF-VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV---QI 480
VS+ + G S + D R + + P + +KQ++ + +
Sbjct: 689 KLNKVSDASNTNRRNAGPRLSGENKDRLDKADLRLSKLTLPSNLDLIKQLDSKAAKQGKK 748
Query: 481 SLTNSIYWNAHTFALTE 497
+ T S+ W++ +L +
Sbjct: 749 ADTFSLVWSSQAPSLLQ 765
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
C + V S+G + G+LG+ +D + P L+E ++ + VA G++H AV+
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGN-PNSDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V S G N++ GN +++ P LV +
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RIAG 350
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+Q++ + H LT +++ +G G G+LG
Sbjct: 351 EHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 384
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 267
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 35 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
R G V+T WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 94 RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147
Query: 326 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G G LGHG+ P+ I L L V+ G WH A++ G++
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 432
T+G G +G LGHGN S PK V++L+ +K I VA G + T + E G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++++G G+ LGH G++ + L P V SL ++ +++ +S+ T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311
Query: 493 FALTESGKLYAFGAGDKGQLG 513
LT SGK+ + G GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 151/309 (48%), Gaps = 28/309 (9%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P P+ +L G++I+QAA G
Sbjct: 47 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHC 106
Query: 210 MLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 263
+ + D G YA+G + +G E E GT+ + P + V Q A G +
Sbjct: 107 LAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHS 166
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 319
VL++EG V+T+ G P D++ P + G LE + V+ + A L
Sbjct: 167 VVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRVIAVGA----FHNL 213
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
A G+ +++ G G+LG G HP +E L+L V +AAG WH+ +
Sbjct: 214 ALTEDGI-LWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSL--VDIAAGGWHSTALTIQ 270
Query: 380 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V WG G +G LG G+++ VP V+ L + V+ G + ++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYG 330
Query: 439 CGESASLGH 447
G+ LG+
Sbjct: 331 RGDHGRLGY 339
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 174/374 (46%), Gaps = 34/374 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG G EE+ + +L + AG+ ++ I + G+++ +G +
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQ 69
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK +SP V +L + +VQAAIG + + G Y +WG + G
Sbjct: 70 RGTLGHPPK-TKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAY--AWGGN-EYGQ 125
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E + + +IP Q A + +A + V + + GH
Sbjct: 126 CGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLT-------QEGHVWTW 178
Query: 346 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
+ P ++ ++ L+ V V+A GA+H + +DG + WG YG LG G+ +
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQ 238
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
S P V+ L+D+ + +A G + + ++ G+VY++G GE LG G+ +
Sbjct: 239 PRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGF-------GDDKS 291
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
+ + P V L E +VQ+S + H+ ALT G+++++G GD G+LG
Sbjct: 292 SRMVPLKVELL--AGEDIVQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---GR 341
Query: 520 QTERGNPERVDIDL 533
+ G P VDIDL
Sbjct: 342 KLTTGQPMGVDIDL 355
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 104/252 (41%), Gaps = 45/252 (17%)
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
+A P AV + G G G+LG G ++ +E + VV AG+ ++ + +
Sbjct: 1 MAAPPRATAVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVV--AGSRNSLAICE 58
Query: 379 DGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DGR+ TWGW + G LGH + ES P V AL +K + A G + V ++G Y++
Sbjct: 59 DGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAW 118
Query: 438 GCGESASLGHNAIADGQGNR--------------------------HANVLT-------- 463
G E G G R H+ VLT
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTW 178
Query: 464 --PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVN 518
P +KQ++ RV + I A H ALTE G L+A+G + GQLG
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TG 235
Query: 519 NQTERGNPERVD 530
+ R +P RV+
Sbjct: 236 DTQPRSHPIRVE 247
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 27/351 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
+VY +GSNSS QL GT E+ +P+ + ++I+A G T +S G V A GK
Sbjct: 371 MVYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAVKACGKG 428
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARL 283
S+G G + + ++E + + V ++ G + T ++ EG V+++ G+ +L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH P + G L VV ++AGY + A+ + +Y+ G G G+LGH
Sbjct: 489 GHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVT---NDGELYTWGEGDFGRLGHSD 545
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC-TWGWGRYGCLGHGNEECES 402
P L++ + VA G+ H V QDGR+ ++G G G LGHG+
Sbjct: 546 SHSRNVPTLVKDISGVG----QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVY 601
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
PKV++AL+ V G ++ ++ G V+++GCG G G+ L
Sbjct: 602 RPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCL---------GCGSSETTSL 652
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+L+ L +++ IS +S H AL+ +++A+G GQ G
Sbjct: 653 RPRLIEELSIT--KIIDISCGDS-----HCLALSHENEVFAWGNNAMGQCG 696
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 177/346 (51%), Gaps = 27/346 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLQGIRIIQAAAGA-GR 208
AG + +V++ G V + G S G+LG G + + P+ + + +R + ++ G+ G
Sbjct: 408 AGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH 467
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 267
T+ ++ G+V+++G +G+ +G T+ P++++ L VV + G +A ++
Sbjct: 468 TLAVTAEGEVFSWGDGDYGKLGHGNSATQ--KYPKIIQGPLLGKVVVCVSAGYRHSAAVT 525
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGM 326
+G +YT+ G+ RLGH +D + +++I V Q+A G + +A+A G
Sbjct: 526 NDGELYTWGEGDFGRLGH----SDSHSRNVPTLVKDISGVGQVACGSSHTIAVA--QDGR 579
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G GKLGHG P++IE ++ V AG+ + + G+V WG
Sbjct: 580 IVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKV--CAGSQSSLALTSAGQVFAWG 637
Query: 387 WGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G CLG G+ E S+ P++++ L+ K I ++ GD +S + +V+++G
Sbjct: 638 CG--SCLGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWG------- 688
Query: 446 GHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+NA+ GQG+ V P+ V L+ V+ + + ++S+ W A
Sbjct: 689 -NNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTA 733
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 148/300 (49%), Gaps = 32/300 (10%)
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D VY +G +S + G + + P+L + + +++A G + T +S +G V
Sbjct: 367 NDTVMVYVWGSNSSHQLAEGT--LEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAV 422
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLL----GTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G+ RLG N P L+ T+ + + + G+ LA G V
Sbjct: 423 KACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH----TLAVTAEG-EV 477
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+S G G GKLGHG+ +K+P++I Q LL V V+AG H+A V DG + TWG G
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKII-QGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEG 536
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGH 447
+G LGH + +VP +V+ ++ V VA G T V++DG V+SFG G++ LGH
Sbjct: 537 DFGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGH 594
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
G NR V P+++ +L R V +S+ ALT +G+++A+G G
Sbjct: 595 -----GDTNR---VYRPKVIEALHGFIIRKVCAGSQSSL-------ALTSAGQVFAWGCG 639
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 58/279 (20%)
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV--------QIAAGY-CYLLALA 320
G+ + WGN G H + D GT ++P + Q+ G C L
Sbjct: 3858 GKSEVYLWGN----GRHGQLADA------GTSASVPTLAPSLSQTQQVVCGQNCTFLV-- 3905
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQD 379
Q +G V +VG G G+LG G+ D P +I Q + +V + G+ H+ + +
Sbjct: 3906 -QANG-TVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G V +WG G YG LGHGN E + PK ++ L + + +A G + VV+ DG +++FG
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGS 4023
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWN-------- 489
G+S LG + +N + P+ VT+L + +R+ I L +++ N
Sbjct: 4024 GDSGRLGQRST--------SNKMIPERVTALDGHHIGQRL--IGLPDAMLKNHNRPQIIP 4073
Query: 490 --------------AHTFALTESGKLYAFGAGDKGQLGI 514
H AL+ +G +YA+G + QLG+
Sbjct: 4074 ALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGL 4112
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 149 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H+IAV G +V+SFG +G+LGHG T +RP+ I +L G I + AG+
Sbjct: 563 QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQ 622
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAV 265
++ ++ AGQV+A+G S G G+ TS P+L+E L ++ + G+
Sbjct: 623 SSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRLIEELSITKIIDISCGDSHCLA 677
Query: 266 LSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
LS E V F+WGN+A +G HT +P ++G LE + + QI AG + LA
Sbjct: 678 LSHENEV--FAWGNNA-MGQCGQGHTSTPVTKPKKVIG-LEGVSIQQITAGTSHSLAWTA 733
Query: 322 QPS 324
P+
Sbjct: 734 VPT 736
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHS+A+T G V+S+G G+LGHG +E + RP+ I LQG ++Q A G + +++
Sbjct: 3955 GHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+++ FG G K++ P+ V +L + Q IG
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMI--PERVTALDGHHIGQRLIGL-------------- 4058
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
DA L +H P ++ LE + + IA G ++LAL+ + VY+ GC
Sbjct: 4059 ----PDAMLKNHNRPQ------IIPALEGVFIEDIAVGCEHILALS---NTGDVYAWGCN 4105
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+LG G K P L+ Q N++ ++AG H++
Sbjct: 4106 CEAQLGLGHSNPVKEPILVTTLQGKNIRQ--ISAGRCHSS 4143
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 51/315 (16%)
Query: 217 QVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
+VY +G G+ A+ G + +P L ++ Q G T ++ G V
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAPSLSQT------QQVVCGQNCTFLVQANGTVLAV 3914
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-CYLLALACQPSGMAVYSVGCG 334
G+ RLG +D+ ++ L+ V Q+ Y +LA +G V+S G G
Sbjct: 3915 GEGSYGRLGQGNS-DDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETG-EVFSWGDG 3972
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
GKLGHG+ ++ P+ IE Q + V +A G H+AVV DG++ T+G G G LG
Sbjct: 3973 DYGKLGHGNSERQRRPKQIEGLQ--GEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLG 4030
Query: 395 HGNEECESVP-----------------------------KVVQALNDVKAIHVATGDYTT 425
+ + +P +++ AL V +A G
Sbjct: 4031 QRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHI 4090
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTN 484
+S GDVY++GC A LG H+N V P LVT+L+ N R + +
Sbjct: 4091 LALSNTGDVYAWGCNCEAQLGLG---------HSNPVKEPILVTTLQGKNIRQISAGRCH 4141
Query: 485 SIYWNAHTFALTESG 499
S W + SG
Sbjct: 4142 SSAWTTPALSTRASG 4156
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 431
+V +G V G G YG LG GN + P ++ AL + T D + ++E
Sbjct: 3904 LVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G+V+S+G G+ LGH G R P+ + L+ E VVQ++ H
Sbjct: 3964 GEVFSWGDGDYGKLGH-----GNSERQRR---PKQIEGLQ--GEEVVQLACGFK-----H 4008
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+ +T GKL+ FG+GD G+LG +N+ PERV
Sbjct: 4009 SAVVTADGKLFTFGSGDSGRLGQRSTSNKM---IPERV 4043
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G HS VT+ G +++FGS SG+LG +T + P + +L G I Q G
Sbjct: 3998 EVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIG 4057
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
ML K PQ++ +L+ +F+ A+G
Sbjct: 4058 LPDAML-------------------------KNHNRPQIIPALEGVFIEDIAVGCEHILA 4092
Query: 266 LSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
LS G VY + +A+LG H+ P V+ L+ TL+ + QI+AG C+ + A
Sbjct: 4093 LSNTGDVYAWGCNCEAQLGLGHSNP--VKEPILVTTLQGKNIRQISAGRCH--SSAWTTP 4148
Query: 325 GMAVYSVGCGLGGKLG 340
++ + GC G +LG
Sbjct: 4149 ALSTRASGCS-GIQLG 4163
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 161/340 (47%), Gaps = 38/340 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q + G+ L + G+V+ +G++ G +G + ++ P+LVES
Sbjct: 245 PKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTD--EDISRPKLVES 302
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V A G F T ++ G +Y +WG N LGH + P + G LE
Sbjct: 303 LAVSNVEYIACGEFHTCAVTASGDLY--NWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG 360
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + ALA S V++ G G G LGHG+R + +P+ +E L +
Sbjct: 361 LQVLSVACG-SWHSALAM--SSGKVFTFGDGTFGALGHGNRENVAYPKEVES--LSGFRT 415
Query: 364 VVVAAGAWHAAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ VA G WH+A + Q G ++ TWG G LGHG++E VP VVQAL D
Sbjct: 416 MKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN 475
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T ++ G V++ G LG N ADG+ P V K
Sbjct: 476 NFHQVACGYSMTIALATSGHVFTMGSSNYGQLG-NPKADGK--------QPCQVQD-KLS 525
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS + H LT ++Y +G G G+LG
Sbjct: 526 SELVEEISCG-----SYHVAVLTSRSEVYTWGMGANGRLG 560
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 153/296 (51%), Gaps = 23/296 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ AVT+ G +Y++G S +G LGHG W P+ + L+G++++
Sbjct: 307 NVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSV 366
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G+ + L +G+V+ FG +FG +G + V P+ VESL ++ A G +
Sbjct: 367 ACGSWHSALAMSSGKVFTFGDGTFGALGHGNREN--VAYPKEVESLSGFRTMKVACGVWH 424
Query: 263 TAVL----SREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+A + S+ G +++T+ G+ RLGH + + P + ++N Q+A G
Sbjct: 425 SAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN-NFHQVACG 483
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
Y +ALA + V+++G G+LG+ + D K P + Q +L + ++ G++H
Sbjct: 484 YSMTIALA---TSGHVFTMGSSNYGQLGN-PKADGKQPCQV-QDKLSSELVEEISCGSYH 538
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
AV+ V TWG G G LGHG E + P +V AL D +A G ++TT +
Sbjct: 539 VAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCI 594
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 21/335 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H T +G V+++G G+LGHGT E+ RP+ + SL + A G
Sbjct: 258 QISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFH 317
Query: 209 TMLISDAGQVYAFGKDSF--GEAEYGVQGT----KLVTSPQLVESLKNIFVVQAAIGNFF 262
T ++ +G +Y +G S+ G +G+ + K V+ P L+ + V+ A G++
Sbjct: 318 TCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGP-----LEGLQVLSVACGSWH 372
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A+ G+V+TF G LGH N P + +L +++A G + A+
Sbjct: 373 SALAMSSGKVFTFGDGTFGALGHGNRENVAYPKE-VESLSGFRTMKVACGVWHSAAIVET 431
Query: 323 PSGMAV-------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
S V ++ G G +LGHG + P +++ N VA G
Sbjct: 432 TSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQ--VACGYSMTIA 489
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ G V T G YG LG+ + + +V L+ ++ G Y V++ +VY
Sbjct: 490 LATSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVY 549
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
++G G + LGH I D + + L + V S+
Sbjct: 550 TWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSI 584
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 156/322 (48%), Gaps = 43/322 (13%)
Query: 212 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
I G VY +G+ S G + T ++ P+ +ES + V Q + G+ A+
Sbjct: 210 IESLGDVYVWGEVWTDVIPSEGSSNLVCSKTDVLI-PKPLESDVVLDVQQISCGSRHIAL 268
Query: 266 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+R+G V+T WG + RLGH T+ D+ L+ +L V IA G + A+
Sbjct: 269 TTRQGEVFT--WGEELGGRLGHGTD-EDISRPKLVESLAVSNVEYIACGEFHTCAVTA-- 323
Query: 324 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG +Y+ G G G LGHG P+ + L LQ + VA G+WH+A+ G+
Sbjct: 324 SG-DLYNWGDGSYNAGLLGHGIGASHWLPKRVSG-PLEGLQVLSVACGSWHSALAMSSGK 381
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 431
V T+G G +G LGHGN E + PK V++L+ + + VA G + + + E
Sbjct: 382 VFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVS 441
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
++++G G+ LGH G++ A L P +V +L V+ Q++ S+
Sbjct: 442 RKLFTWGDGDKNRLGH-------GDKEAR-LVPTVVQAL--VDNNFHQVACGYSM----- 486
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T AL SG ++ G+ + GQLG
Sbjct: 487 TIALATSGHVFTMGSSNYGQLG 508
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 145/307 (47%), Gaps = 18/307 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLIS 213
HSIA+T+KG ++G+ +LGHG++ +E+ PR I SL+G R+ A G G T+ +
Sbjct: 221 HSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALI 279
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
++G++YA+G S G G + + S+ + G + LS +GR Y
Sbjct: 280 ESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAY 339
Query: 274 TFSWGNDARLGH-HTEPN----DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+ N + GH HT ++E E V AAG + L C SG V
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGG-WEHTLFCTASGR-V 397
Query: 329 YSVGCGLGGK--------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
YS GCG LGHG P ++ + + V VA G H+ V +G
Sbjct: 398 YSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANG 457
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
RV TWG G G LGHG+EE +P +V+ ++ K G T ++ D ++++ G G
Sbjct: 458 RVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCGQG 517
Query: 441 ESASLGH 447
+S LGH
Sbjct: 518 DSGRLGH 524
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 33/278 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR----SLQGIRIIQAAAGAGR 208
G GH++A+ G +Y++G+ S+G+LG G T + R P R S+ +R GA
Sbjct: 271 GLGHTLALIESGELYAWGNGSNGRLGLGDTND--RSSPTRSNGASIAPVRFRHIFCGASH 328
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-------FVVQAAIGNF 261
++ +S G+ YA+GK++ G+ +G + Q +ES ++ FVV AA G
Sbjct: 329 SLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTI--QEIESFRDTEEGEEEEFVVYAAGGWE 386
Query: 262 FTAVLSREGRVYTFSWG-NDAR-------LGHHTEPNDVEP---HPLLGTLENIPVVQIA 310
T + GRVY+ G D+R LGH ++P L T E VV++A
Sbjct: 387 HTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEE--VVKVA 444
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G+ + LA+ VY+ G G GKLGHG P L+ ++ AG
Sbjct: 445 CGWDHSLAVTANGR---VYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKD--AKAGC 499
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
H + D + T G G G LGHG+ + P ++
Sbjct: 500 EHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIE 537
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 143/342 (41%), Gaps = 53/342 (15%)
Query: 216 GQVYAFGKDSFGEAEYG-----------VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + +FGK G+ +G K+V P ++ + +++ + + +
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMV--PTMIAATRDVLFRKIDSLSTHSI 223
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ +G + G+ RLGH + + P + V +A G + LAL S
Sbjct: 224 AITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALI--ES 281
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G +Y+ G G G+LG G D P + ++ + GA H+ + DGR
Sbjct: 282 G-ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYA 340
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVK-------AIHVATGDYTTFVVSEDGDVYSF 437
WG G GHG+ + + +++ D + ++ A G T + G VYS
Sbjct: 341 WGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSC 400
Query: 438 GCGESAS--------LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
GCG S LGH G +R L P V +L +E VV+++ W+
Sbjct: 401 GCGYKDSRRAGIPPVLGH-----GDCDRR---LKPTSVQALDDTHEEVVKVACG----WD 448
Query: 490 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
H+ A+T +G++Y +G+G G+LG G+ E DI
Sbjct: 449 -HSLAVTANGRVYTWGSGANGKLG---------HGDEESFDI 480
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 163/399 (40%), Gaps = 57/399 (14%)
Query: 164 GVVYSFGSNSSGQLGHG-----------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G + SFG G+LGHG TE + P I + + + + + + ++ I
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 270
+ G+ A+G +G + +P+ +E SLK V A G T L G
Sbjct: 226 TAKGEAMAWGNGDKYRLGHGSSSKEY--TPRTIEFLSLKG-RVRDLACGLGHTLALIESG 282
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+Y + G++ RLG + P G ++ + I G + L L+ Y
Sbjct: 283 ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGR---AY 339
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ----LLNLQPVVVAAGAW-HAAVVGQDGRVCT 384
+ G G+ GHG D+ + IE F+ + VV AAG W H GRV +
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYS 399
Query: 385 WGWG-----RYG---CLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDV 434
G G R G LGHG+ + P VQAL+D + + VA G + V+ +G V
Sbjct: 400 CGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRV 459
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHT 492
Y++G G + LGH + P LV + K+V + HT
Sbjct: 460 YTWGSGANGKLGHGD--------EESFDIPTLVRCMDGKKVKDAKAGCE---------HT 502
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
LT +L+ G GD G+LG + R P ++++
Sbjct: 503 VFLTYDHELWTCGQGDSGRLGH---GDSQTRKRPTKIEL 538
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-------IIQAA 203
G HS+ ++ G Y++G N+ GQ GHG T ++W + I S + ++ AA
Sbjct: 323 FCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAA 382
Query: 204 AGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF--VVQ 255
G T+ + +G+VY+ G KDS V G P V++L + VV+
Sbjct: 383 GGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVK 442
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G + ++ GRVYT+ G + +LGH E + P L+ ++ V AG +
Sbjct: 443 VACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIP-TLVRCMDGKKVKDAKAGCEH 501
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ L +++ G G G+LGHG K P IE F
Sbjct: 502 TVFLTYDHE---LWTCGQGDSGRLGHGDSQTRKRPTKIELF 539
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 32/213 (15%)
Query: 322 QPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAG---------- 369
QP G + S G G GKLGHG S + E + P ++AA
Sbjct: 163 QPCGY-LMSFGKGDHGKLGHGQCSHVSCQEGNCTEN----KMVPTMIAATRDVLFRKIDS 217
Query: 370 -AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFV 427
+ H+ + G WG G LGHG+ E P+ ++ L+ + +A G T
Sbjct: 218 LSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLA 277
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
+ E G++Y++G G + LG D +N + + +
Sbjct: 278 LIESGELYAWGNGSNGRLGLGDTNDRSSPTRSN-------------GASIAPVRFRHIFC 324
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+H+ L+ G+ YA+G ++GQ G N+Q
Sbjct: 325 GASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQ 357
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 214 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 273
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 274 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 331
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 332 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 389
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
C + V S+G + G+LG+ + +D + P L+E ++ + VA G++H AV+
Sbjct: 390 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 445
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 446 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 488
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 153/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 145 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 262
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + A S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 263 VAYVSCGTWH---TALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 317
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 318 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 377
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V S G N++ GN +++ P LV +
Sbjct: 378 FYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RIAG 427
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+Q++ + H LT +++ +G G G+LG
Sbjct: 428 EHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 461
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 267
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 112 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 170
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
R G V F+WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 171 RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 224
Query: 326 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G G LGHG+ P+ I L L V+ G WH A++ G++
Sbjct: 225 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 283
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 432
T+G G +G LGHGN S PK V++L+ +K I VA G + T + E G
Sbjct: 284 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 343
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++++G G+ LGH G++ + L P V SL ++ +++ +S+ T
Sbjct: 344 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 388
Query: 493 FALTESGKLYAFGAGDKGQLG 513
LT SGK+ + G GQLG
Sbjct: 389 VCLTTSGKVLSMGNSVYGQLG 409
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 164/339 (48%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + Q A G L++ G+V+ +G++ G +G+ + + P LVE
Sbjct: 119 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEF 176
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G + T ++ +YT+ G N LGH T+ + P ++G+LE +
Sbjct: 177 LAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQ 236
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPV 364
V+ +A G + ALA S +Y+ G G G LGHG R +PR + QLL+ L+ +
Sbjct: 237 VLSVACG-TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLRTI 290
Query: 365 VVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V+ Q G ++ TWG G LGHGN+E +P V +L D
Sbjct: 291 KVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYN 350
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V++ G LG N +DG + P LV + V
Sbjct: 351 FHQLACGHNMTVALTTSGHVFTMGGTAYGQLG-NPSSDG--------VIPCLVQD-RLVG 400
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +IS Y HT LT +++++G G G+LG
Sbjct: 401 EFVEEISC--GAY---HTVVLTSRNEVFSWGRGSNGRLG 434
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 147/286 (51%), Gaps = 21/286 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRT 209
G H+ A+TS +Y++G +SG LGHGT W P R + SL+G++++ A G +
Sbjct: 188 GEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHS 247
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
L + G++Y FG ++G +G + + V P+ V+ L + ++ A G + TA V
Sbjct: 248 ALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLRTIKVACGVWHTAAIVEV 305
Query: 266 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+S+ G +++T+ G+ RLGH + + P + +L + Q+A G+ +AL
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLIDYNFHQLACGHNMTVAL 364
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ V+++G G+LG+ S +D P L+ Q +L+ ++ GA+H V+
Sbjct: 365 T---TSGHVFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEFVEEISCGAYHTVVLTSR 419
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
V +WG G G LGHG+ E P +++AL D ++ G T
Sbjct: 420 NEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFT 465
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V +P+ +E+ + V Q A G A+++R+G V+T WG + RLGH + + PH
Sbjct: 116 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 172
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 354
L+ L V +A G + A+ S +Y+ G G+ G LGHG+ P+ +
Sbjct: 173 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 229
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
L LQ + VA G WH+A+ +G++ T+G G YG LGHG+ E P+ VQ L+ ++
Sbjct: 230 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 288
Query: 415 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGHNAIADGQGNRHANVLTP 464
I VA G + T V+S+ G ++++G G+ LGH GN+ +L P
Sbjct: 289 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH-------GNKETYLL-P 340
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V+SL N Q++ +++ T ALT SG ++ G GQLG
Sbjct: 341 TCVSSLIDYN--FHQLACGHNM-----TVALTTSGHVFTMGGTAYGQLG 382
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 23/333 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H VT +G V+++G G+LGHG + RP + L + A G
Sbjct: 132 QIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYH 191
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 266
T I+ + +Y +G F G GT + ++V SL+ + V+ A G + +A+
Sbjct: 192 TCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALA 250
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 320
+ G++YTF G LGH + V P + L + +++A G + A+
Sbjct: 251 TSNGKLYTFGDGTYGVLGHGDRESVVYPREV-QLLSGLRTIKVACGVWHTAAIVEVMSQT 309
Query: 321 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
S +++ G G +LGHG++ P + N + A G +
Sbjct: 310 GSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQL--ACGHNMTVALTTS 367
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V T G YG LG+ + + +P +VQ L ++ G Y T V++ +V+S+G
Sbjct: 368 GHVFTMGGTAYGQLGNPSSD-GVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 426
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G + LGH + D + P L+ +LK
Sbjct: 427 RGSNGRLGHGDVEDRKA--------PTLIEALK 451
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +Y+FG + G LGHG E PR ++ L G+R I+ A G T I
Sbjct: 243 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 302
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + +++ +G +G + T L+ P V SL + Q A G+
Sbjct: 303 VEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL--PTCVSSLIDYNFHQLACGHNM 360
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG+ + + V P + L V +I+ G + + L
Sbjct: 361 TVALTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLT-- 417
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 377
S V+S G G G+LGHG D K P LIE + +++ + A+ H V G
Sbjct: 418 -SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 476
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECES 402
D VCT + R+ C G C S
Sbjct: 477 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHS 508
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
C + V S+G + G+LG+ +D + P L+E ++ + VA G++H AV+
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGN-PNSDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V S G N++ GN +++ P LV +
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RIAG 350
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+Q++ + H LT +++ +G G G+LG
Sbjct: 351 EHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 384
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 267
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 35 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
R G V+T WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 94 RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147
Query: 326 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G G LGHG+ P+ I L L V+ G WH A++ G++
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 432
T+G G +G LGHGN S PK V++L+ +K I VA G + T + E G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++++G G+ LGH G++ + L P V SL ++ +++ +S+ T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311
Query: 493 FALTESGKLYAFGAGDKGQLG 513
LT SGK+ + G GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 23/292 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LG+GT W P+ I L+G ++ + G T
Sbjct: 137 GEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ GQ++ FG +FG +G + + + P+ VESL + + A G + TA +
Sbjct: 197 ALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEV 254
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKP-TCVASLIDYDFCRIACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V S+G + G+LG+ R+D K P LIE ++ V VA G++H AV+
Sbjct: 314 LTT--SGQ-VLSMGNTVYGQLGN-PRSDGKLPCLIED--IMGEHVVQVACGSYHVAVLTN 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
V TWG G G LGHG+ E +P +V++L D H+A G T + +
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAICQ 419
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G++S G +G + + P+LVES
Sbjct: 68 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LG+ T+ + P + G LE
Sbjct: 126 LAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQ 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + A S +++ G G G LGHG+R PR +E L L+ +
Sbjct: 186 VAYVSCGTWH---TALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E + P V +L D
Sbjct: 241 VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V S G N + GN ++ P L+ + +
Sbjct: 301 FCRIACGHSLTVGLTTSGQVLSMG---------NTVYGQLGNPRSDGKLPCLIEDI--MG 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E VVQ++ + H LT +++ +G G G+LG
Sbjct: 350 EHVVQVACG-----SYHVAVLTNKSEVFTWGKGANGRLG 383
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+PK +++ + HV G +V+++G+V+++G LGH + D +
Sbjct: 67 LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS--------V 118
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P+LV SL N +V HT A+T SG+LY +G G I L+ N T+
Sbjct: 119 HPRLVESLAICNVDIVACG-------EFHTCAVTTSGELYTWGDGTH---NIGLLGNGTD 168
Query: 523 RGN--PERV 529
+ P+R+
Sbjct: 169 VSHWIPKRI 177
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 152/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G+VY++G++S G +GV V P+LVE+
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLVEA 359
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WGN LGH E + P L G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGNGTFNFGLLGHGNEVSHWMPKRLNGPLEG 417
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRT 472
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG+++ VP V +L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLV 532
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G LG N ADG + P V
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG-NPQADG--------MVPARV---- 579
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 213 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ +G+++ +G G +G + T+LV P V SL Q A G+
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVASLVEPNFCQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
FT L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CFTVALTTSGHVYTMGSSVYGQLG-NPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGVDQSMCS 668
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G VYS+G S G+LGHG + +P+ + +L + I A G T +
Sbjct: 319 GGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAV 378
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 379 TLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 439 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNC 498
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + +L Q+A G+C+ +AL +
Sbjct: 499 SSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVASLVEPNFCQVACGHCFTVALT---TSGH 554
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 555 VYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 612
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG+ + + P +V+AL D + V G
Sbjct: 613 GANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G +++++G VY SWG ++ RLGH + + +P L+
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVY--SWGEESGGRLGHGVDCDVPQPK-LVE 358
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L ++ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 359 ALAHMNIELVACGEYHTCAVTLS-GDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNG-PLE 416
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH AVV G++ T+G G +G LGHG+ + SVP+ V++L ++ + A
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 476
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 477 CGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 528
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
SL + N Q++ + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 529 ASLVEPN--FCQVACGHCF-----TVALTTSGHVYTMGSSVYGQLG----NPQADGMVPA 577
Query: 528 RVDIDL 533
RV+ L
Sbjct: 578 RVEGKL 583
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 46/373 (12%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +G+ + G+LG G EEE PR + Q +++ G T+ ++ G++YA G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 224 DSFGEAEYGVQGTKLVTSP---------QLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
+ G+ G L T P + + SL+N + + G + L+ G+V
Sbjct: 63 NDHGQL-----GHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQV-- 115
Query: 275 FSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
FSWG++A +LGH E N +P P ++ + VVQIA+G + LAL + +Y+
Sbjct: 116 FSWGSNAVGQLGHDAE-NGRQPTPRMIKAIGAKHVVQIASGQYHCLALT---NNGELYAW 171
Query: 332 GCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G+ T EK P LI+ L + +A G H+ V + G + WG
Sbjct: 172 GSNSYGQLGIGT-TSEKVPMPTLIQS--LAGVPIAFIACGGNHSFAVSKSGAIFGWGKNT 228
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG + P ++ L + +++ GD + ++ +G V++ G G LGH +
Sbjct: 229 FGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGS 288
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGD 508
+N + P+ V L + ++ QI+ HT A S GK+Y FG G
Sbjct: 289 C--------SNEIVPRKVFEL--MGSKITQIACGRR-----HTLAFVPSRGKIYGFGLGG 333
Query: 509 KGQLGIELVNNQT 521
GQLGI +V N +
Sbjct: 334 VGQLGIGMVGNHS 346
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 138/260 (53%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A+T+ G V+S+GSN+ GQLGH + PR I+++ ++Q A+G +
Sbjct: 102 GTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLA 161
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+++ G++YA+G +S+G+ G K V P L++SL + + A G + +S+ G
Sbjct: 162 LTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGA 220
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + + P L TL ++ V I+ G + + L + V+
Sbjct: 221 I--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSLGVRYISCGDDFSVFLTNEG---GVF 274
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGHGS ++E PR + F+L+ + +A G H A V G++ +G G
Sbjct: 275 TCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 332
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G S P++V+
Sbjct: 333 GVGQLGIGMVGNHSTPQIVR 352
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 33/328 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIR-----SLQGIRIIQAAAGA 206
G H++ +T +G +Y+ G+N GQLGH T RPR R SL+ I + G
Sbjct: 44 GTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGT 103
Query: 207 GRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
++ +++ GQV+++G ++ G +AE G Q T P++++++ VVQ A G +
Sbjct: 104 AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPT-----PRMIKAIGAKHVVQIASGQYH 158
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
L+ G +Y +WG+++ +LG T V L+ +L +P+ IA G + + A
Sbjct: 159 CLALTNNGELY--AWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNH--SFA 214
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
SG A++ G G+LG +P + + L ++ ++ G + + +G
Sbjct: 215 VSKSG-AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR--YISCGDDFSVFLTNEG 271
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGC 439
V T G G +G LGHG+ E VP+ V L K +A G +T V G +Y FG
Sbjct: 272 GVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGL 331
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLV 467
G LG + N TPQ+V
Sbjct: 332 GGVGQLGIGMV--------GNHSTPQIV 351
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 207
Q +G H +A+T+ G +Y++GSNS GQLG GTT E+ P I+SL G+ I A G
Sbjct: 151 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGN 210
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G ++ +GK++FG+ G+ P + +L+++ V + G+ F+ L+
Sbjct: 211 HSFAVSKSGAIFGWGKNTFGQL--GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT 268
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
EG V+T G +LGH + N++ P + L + QIA G + LA PS
Sbjct: 269 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF-ELMGSKITQIACGRRHTLAFV--PSRGK 325
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLI 353
+Y G G G+LG G + P+++
Sbjct: 326 IYGFGLGGVGQLGIGMVGNHSTPQIV 351
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 149/292 (51%), Gaps = 26/292 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 369 GEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 428
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG +G + K V+ P+ VESLK + V+AA G + TA +
Sbjct: 429 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEV 486
Query: 267 -------SREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
S V F+WG+ RLGH + + P + L V Q+A G+ +
Sbjct: 487 MVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV--ALAEHNVCQVACGHSLTV 544
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + VY++G + G+LG+ + D K P L+E +L +A GA+H AV+
Sbjct: 545 ALT---TSGRVYTMGSPVYGQLGN-PQADGKLPILVEG-KLSESFVEEIACGAYHVAVLT 599
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
V TWG G G LGHG+ + + P +V+AL D +A G TTF +
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACG--TTFTAA 649
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 150/343 (43%), Gaps = 43/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+V+++G++S G +GV V P+L+E+
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIEA 357
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L N + A G + + ++ G +YT WGN LGH + + P + G LE
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYT--WGNGTYNYGLLGHGNQVSHWVPKRVNGPLEG 415
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 416 IHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 470
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + + TWG G G LGH ++E + VP V AL
Sbjct: 471 VRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV-ALA 529
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G LG N ADG+ P LV
Sbjct: 530 EHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLG-NPQADGK--------LPILV---- 576
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + S I A H LT ++Y +G G G+LG
Sbjct: 577 ---EGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 113/251 (45%), Gaps = 28/251 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 424 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAV 483
Query: 213 SDAG------------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++ +G G + + KLV P V +L V Q A G+
Sbjct: 484 VEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV--PTCV-ALAEHNVCQVACGH 540
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLA 318
T L+ GRVYT +LG+ P P+L G L V +IA G ++
Sbjct: 541 SLTVALTTSGRVYTMGSPVYGQLGN---PQADGKLPILVEGKLSESFVEEIACGAYHVAV 597
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHA 373
L S VY+ G G G+LGHG D P L+E + +++ + AA H
Sbjct: 598 LT---SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAICLHK 654
Query: 374 AVVGQDGRVCT 384
V G D +C+
Sbjct: 655 WVSGVDQSMCS 665
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G++ D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 292 GAKMDSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV 349
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
PK+++AL++ VA G+Y + V+ GD+Y++G G +N G GN+ ++
Sbjct: 350 LHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGT-----YNYGLLGHGNQVSHW 404
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ ++ +S + W HT +T +G+L+ FG G G LG
Sbjct: 405 VPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGTFGALG 449
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS GQLG+ + + L + + A GA
Sbjct: 535 QVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYH 594
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK + G +G T +P LVE+LK+ V A G FTA +
Sbjct: 595 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 47/362 (12%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ ++GS GQLG GT EE+ + +L+ + +G+ ++ I D G ++ +G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK P V++L N+ + QAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--AWGGNEYGQC 123
Query: 286 HTEP-NDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
EP D P+ + + V Q+AAG + + L
Sbjct: 124 GEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT----------------- 166
Query: 338 KLGHGSRTDEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYG 391
+ GH + P ++ ++ L+ V ++A GA+H + +DGR+ WG YG
Sbjct: 167 REGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYG 226
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + S P V L+D+ + +A G + + +++ G+VY +G GE LG
Sbjct: 227 QLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGD-- 284
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
N ++ + PQ V L + E ++Q+S + H+ ALT G++++FG GD G+
Sbjct: 285 ----NDKSSKMVPQKVNLLAE--EDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGR 333
Query: 512 LG 513
LG
Sbjct: 334 LG 335
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 149/311 (47%), Gaps = 32/311 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
++G +S+A+ G ++++G N G LGH T+ E P +++L ++I QAA G
Sbjct: 44 VSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 318
+ VL+REG V+T+ G P D++ P + G LEN+ ++ + A
Sbjct: 162 SVVLTREGHVWTW--------GQPWPPGDIKQIFVPVRVQG-LENVSIIAVGA----FHN 208
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA + G + + G G+LG G HP + L L V +AAG WH+ +
Sbjct: 209 LALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTL--VDIAAGGWHSTALTD 265
Query: 379 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G V WG G +G LG G+ + S VP+ V L + I V+ G + ++ DG ++S
Sbjct: 266 KGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 437 FGCGESASLGH 447
FG G+ LG+
Sbjct: 326 FGRGDHGRLGY 336
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 25/267 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPR------PIRSLQGIRII 200
+QA G H +AV +G Y++G N GQ G ++E RP P R + +
Sbjct: 94 TQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR 153
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+ +G+ + K + P V+ L+N+ ++ A+G
Sbjct: 154 QVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQIFVPVRVQGLENVSII--AVGA 205
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
F L +GR+ +WGN+ +LG P P+ G L+++ +V IAAG + A
Sbjct: 206 FHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTSHPVPVHG-LDDLTLVDIAAGGWHSTA 262
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 377
L + VY G G G+LG G D+ + ++ LL + ++ V+ G H+ +
Sbjct: 263 LTDKGE---VYGWGRGEHGRLGFGD-NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVP 404
+DGR+ ++G G +G LG+G + P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN IA G H++A+ G + ++G+N GQLG G T+ P P+ L + ++ AA
Sbjct: 196 ENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAA 255
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++D G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315
Query: 265 VLSREGRVYTFSWGNDARLGH 285
L+R+GR+++F G+ RLG+
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGY 336
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
S ++ + G G G+LG G+ +++ ++E + +++ VV +G+ ++ + DG +
Sbjct: 3 SATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVV--SGSRNSLAICDDGTMF 60
Query: 384 TWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
TWGW + G LGH E + E++P V+AL +VK A G + V + G Y++G E
Sbjct: 61 TWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 443 ASLGHNAIAD-------------------------GQGNRHANVLT----------PQLV 467
G + D G H+ VLT P
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPP 180
Query: 468 TSLKQ--VNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
+KQ V RV + + I A H AL E G+L A+G + GQLG
Sbjct: 181 GDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ WG G G LG G E + VV+AL V +G + + +DG ++++G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+LGH + N+ P V +L V +T + H A+ + G+
Sbjct: 67 RGTLGHPPE-----TKTENI--PSRVKALANVK-------ITQAAIGGWHCLAVDDQGRA 112
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
YA+G + GQ G E + + E G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 27/292 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 211
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 426
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 266
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 427 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 316
G+++T+ G+ +RLGH D EP + + L Q+A G+
Sbjct: 485 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 540
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL SG VY++G + G+LG+ D K P +E +L +A GA+H AV+
Sbjct: 541 VALTT--SGH-VYTMGSPVYGQLGN-PHADGKVPTRVEG-KLHKSFVEEIACGAYHVAVL 595
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 596 TSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 148/339 (43%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+ +++G++S G +GV V P+L+++
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDA 355
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + A G + + ++ G +YT+ G+ LGH E + P + +E I V
Sbjct: 356 LSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 415
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + S +++ G G G LGHG R PR ++ L L+ V A
Sbjct: 416 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 470
Query: 368 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
G WH A V + G++ TWG G LGHG++E + VP V AL +
Sbjct: 471 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 530
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T ++ G VY+ G LG N HA+ P V E
Sbjct: 531 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV-------E 574
Query: 476 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
+ S I A H LT ++Y +G G G+LG
Sbjct: 575 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 613
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 145/306 (47%), Gaps = 40/306 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G +++++G +FSWG ++ RLGH + N P L+
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 354
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ SG +Y+ G G G LGHG+ P+ + F +
Sbjct: 355 ALSTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 410
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ +A G +H AVV G++ T+G G +G LGHG+ + +P+ V +L ++ + A
Sbjct: 411 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 470
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ + LGH G++ L P V
Sbjct: 471 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 522
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N + P
Sbjct: 523 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 571
Query: 528 RVDIDL 533
RV+ L
Sbjct: 572 RVEGKL 577
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G
Sbjct: 415 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 474
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G +G + KLV P V +L Q
Sbjct: 475 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQ 532
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G VYT +LG+ V P + G L V +IA G +
Sbjct: 533 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVEGKLHKSFVEEIACGAYH 591
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 592 VAVLT---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC 648
Query: 371 WHAAVVGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHV 418
H G D +C+ + R+ C G C S K A N K V
Sbjct: 649 LHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCTNKKSLKACMAPNPNKPYRV 708
Query: 419 ATGDYTTFVVSEDGDVYSFGC---GESASLGHNAI---------ADGQGNRHANVLTPQL 466
+ + + D S ES + G +AI +DGQ R + L
Sbjct: 709 CDRCFNKLKKAMETDPSSHSSLSRRESVNQGSDAIDRDEKLDTRSDGQLARFS------L 762
Query: 467 VTSLKQVNER 476
+ ++QV+ R
Sbjct: 763 LEPMRQVDSR 772
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y VG L K+ D P+ +E +L++Q +A G HA +V + G +WG
Sbjct: 283 YRVGSSLEIKM------DSLLPKALESTIVLDVQ--YIACGGQHAVLVTKQGESFSWGEE 334
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGHG + PK++ AL+ VA G+Y + V+ GD+Y++G G+ LGH
Sbjct: 335 SEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH- 393
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
GN ++ + K+VN + I +++ HT +T +G+L+ FG G
Sbjct: 394 ------GNEVSHWVP-------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 440
Query: 509 KGQLG 513
G LG
Sbjct: 441 FGVLG 445
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LGHGT W P+ I +L G+ + + G T
Sbjct: 137 GEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG SFG +G ++ P+ VESL + + A G + TA +
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + + ++P + +L + ++A G+ +
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASLIDYDFYRVACGHSLTV- 312
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
C + V S+G + G+LG+ + +D + P L+E ++ + VA G++H AV+
Sbjct: 313 --CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGEHVLQVACGSYHVAVLTG 368
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E VP V+AL D H+A G
Sbjct: 369 RSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G V+ +G+DS G +G + + P+LVES
Sbjct: 68 PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH T+ P + G L+ +P
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLP 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + + S +++ G G G LGHG+ T P+ +E L L+ +
Sbjct: 186 VAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVE--SLSGLKTIA 240
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A + + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V S G N++ GN +++ P LV +
Sbjct: 301 FYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RIAG 350
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V+Q++ + H LT +++ +G G G+LG
Sbjct: 351 EHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 384
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 267
G VY +G + F E V ++ S P+ +ES + V G A+++
Sbjct: 35 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
R G V F+WG D+ RLGH T + V P L+ +L V +A G + A+ +
Sbjct: 94 RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147
Query: 326 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+Y+ G G G LGHG+ P+ I L L V+ G WH A++ G++
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 432
T+G G +G LGHGN S PK V++L+ +K I VA G + T + E G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++++G G+ LGH G++ + L P V SL ++ +++ +S+ T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311
Query: 493 FALTESGKLYAFGAGDKGQLG 513
LT SGK+ + G GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 40/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + Q A G L++ G+V+ +G++ G +G+ + + P LVE
Sbjct: 257 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEF 314
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V A G + T ++ +YT WG N LGH T+ + P ++G+LE
Sbjct: 315 LAVSHVDFVACGEYHTCAITSSNDLYT--WGDGIFNSGILGHGTDISHWIPKRVVGSLEG 372
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 362
+ V+ +A G + ALA S +Y+ G G G LGHG R +PR + QLL+ L+
Sbjct: 373 LQVLSVACG-TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLR 426
Query: 363 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ VA G WH A V+ Q G ++ TWG G LGHGN+E +P V +L D
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLID 486
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N +DG + P LV +
Sbjct: 487 YNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLG-NPSSDG--------VIPCLVQD-RL 536
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V E V +IS Y HT LT +++++G G G+LG
Sbjct: 537 VGEFVEEISC--GAY---HTVVLTSRNEVFSWGRGSNGRLG 572
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 147/282 (52%), Gaps = 21/282 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGAGRT 209
G H+ A+TS +Y++G +SG LGHGT W P R + SL+G++++ A G +
Sbjct: 326 GEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHS 385
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
L + G++Y FG ++G +G + + V P+ V+ L + ++ A G + TA V
Sbjct: 386 ALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLRTIKVACGVWHTAAIVEV 443
Query: 266 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+S+ G +++T+ G+ RLGH + + P + +L + Q+A G+ +AL
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLIDYNFHQLACGHNMTVAL 502
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+++G G+LG+ S +D P L+ Q +L+ ++ GA+H V+
Sbjct: 503 TT--SGH-VFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEFVEEISCGAYHTVVLTSR 557
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V +WG G G LGHG+ E P +++AL D ++ G
Sbjct: 558 NEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCG 599
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V +P+ +E+ + V Q A G A+++R+G V+T WG + RLGH + + PH
Sbjct: 254 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 310
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 354
L+ L V +A G + A+ S +Y+ G G+ G LGHG+ P+ +
Sbjct: 311 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 367
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
L LQ + VA G WH+A+ +G++ T+G G YG LGHG+ E P+ VQ L+ ++
Sbjct: 368 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 426
Query: 415 AIHVATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
I VA G + T V+S+ G ++++G G+ LGH GN+ +L P
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH-------GNKETYLL-P 478
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V+SL N Q++ +++ T ALT SG ++ G GQLG
Sbjct: 479 TCVSSLIDYN--FHQLACGHNM-----TVALTTSGHVFTMGGTAYGQLG 520
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 23/333 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H VT +G V+++G G+LGHG + RP + L + A G
Sbjct: 270 QIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYH 329
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVL 266
T I+ + +Y +G F G GT + ++V SL+ + V+ A G + +A+
Sbjct: 330 TCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALA 388
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 320
+ G++YTF G LGH + V P + L + +++A G + A+
Sbjct: 389 TSNGKLYTFGDGTYGVLGHGDRESVVYPREV-QLLSGLRTIKVACGVWHTAAIVEVMSQT 447
Query: 321 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
S +++ G G +LGHG++ P + N + A G +
Sbjct: 448 GSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQL--ACGHNMTVALTTS 505
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V T G YG LG+ + + +P +VQ L ++ G Y T V++ +V+S+G
Sbjct: 506 GHVFTMGGTAYGQLGNPSSDG-VIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 564
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G + LGH + D + P L+ +LK
Sbjct: 565 RGSNGRLGHGDVEDRKA--------PTLIEALK 589
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 118/272 (43%), Gaps = 28/272 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +Y+FG + G LGHG E PR ++ L G+R I+ A G T I
Sbjct: 381 GTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAI 440
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + +++ +G +G + T L+ P V SL + Q A G+
Sbjct: 441 VEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLL--PTCVSSLIDYNFHQLACGHNM 498
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG+ + + V P + L V +I+ G + + L
Sbjct: 499 TVALTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLT-- 555
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 377
S V+S G G G+LGHG D K P LIE + +++ + A+ H V G
Sbjct: 556 -SRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 614
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECES 402
D VCT + R+ C G C S
Sbjct: 615 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHS 646
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 167/347 (48%), Gaps = 36/347 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + S + + A G +++ G+V+++G +S G Q V+ P+LVE+
Sbjct: 253 PRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNES--SRTLGHQINDSVSCPKLVEA 310
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTLENI 304
L ++ V A G+ T ++ G + +S G RLG + E N PH L G +++I
Sbjct: 311 LASVHVKAVAFGSKHTCAVTVSGELLEWSEGAH-RLGLLSNWYERNQWSPHKLFGPMDSI 369
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V +IA G + + S +++ G G G LGHG + P+ +E + L ++ V
Sbjct: 370 SVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSV 426
Query: 365 VVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
A G WH A V + G++ TWG G LGH +++ + VP V L
Sbjct: 427 --ACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYD 484
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ V+ G T V++ G V++ G + LG N ADG+ ++ T + +LK N
Sbjct: 485 FLQVSCGAALTVVLTSTGVVFTIGSSKHGQLG-NPHADGE-----SICTVE--GTLK--N 534
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
E V +IS +S H LT G+++ +G G GQLG+ +N++
Sbjct: 535 EFVREISSGSS-----HVAVLTLKGQVFTWGKGADGQLGLGDYDNRS 576
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 30/278 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G H+ +TS G ++++G + G LGHG + RP+ + SL+G+R+ A G
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPW 431
Query: 208 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
T + + +G+++ +G G+ + + KLV P V+ L + +Q +
Sbjct: 432 HTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV--PTCVDLLTSYDFLQVS 489
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G T VL+ G V+T +LG+ H + + + GTL+N V +I++G ++
Sbjct: 490 CGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESI--CTVEGTLKNEFVREISSGSSHV 547
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAW 371
L + V++ G G G+LG G + P L+E Q ++Q + AA
Sbjct: 548 AVLTLKGQ---VFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACGSNFSAAVCL 604
Query: 372 HAAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 402
H + +D +C+ +G+ R + C G+ C S
Sbjct: 605 HKGMSVKDQSICSGCQMAFGFTRKKHSCYNCGSMFCNS 642
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 24/288 (8%)
Query: 149 QAIA-GPGHSIAVTSKGVV--YSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAA 204
+A+A G H+ AVT G + +S G++ G L + +W P + + I + + A
Sbjct: 317 KAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIAC 376
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G T +I+ +GQ++ +G +FG +G QG + P+ VESLK + V A G + T
Sbjct: 377 GEWHTAIITSSGQLFTYGDGTFGVLGHGDKQG---IARPKEVESLKGLRVKSVACGPWHT 433
Query: 264 AVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
A + + G+++T+ + +LGH + + P + L + +Q++ G
Sbjct: 434 AAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVP-TCVDLLTSYDFLQVSCGA 492
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ L S V+++G G+LG+ E + + L N +++G+ H
Sbjct: 493 ALTVVLT---STGVVFTIGSSKHGQLGNPHADGESICTV--EGTLKNEFVREISSGSSHV 547
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
AV+ G+V TWG G G LG G+ + S P +V+AL +A G
Sbjct: 548 AVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACG 595
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 20/332 (6%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q+IA G H+ VT G V+S+G+ SS LGH + P+ + +L + + A G+
Sbjct: 265 QSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGSK 324
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVL 266
T ++ +G++ + + + + SP +L + +I V + A G + TA++
Sbjct: 325 HTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAII 384
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 320
+ G+++T+ G LGH + P + +L+ + V +A G + A+
Sbjct: 385 TSSGQLFTYGDGTFGVLGHGDKQGIARPKE-VESLKGLRVKSVACGPWHTAAVVEVTSSF 443
Query: 321 -CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
C +++ G GKLGH + + P ++ L + + V+ GA V+
Sbjct: 444 NCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVD--LLTSYDFLQVSCGAALTVVLTST 501
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G V T G ++G LG+ + + ES+ V L + +++G V++ G V+++G
Sbjct: 502 GVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGK 561
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G LG + D + N +P LV +L+
Sbjct: 562 GADGQLG---LGD-----YDNRSSPTLVEALQ 585
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 18/123 (14%)
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+++P++V + + +A G+ +V++ G+V+S+G S +LGH I D +
Sbjct: 250 KALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-IND-------S 301
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
V P+LV +L V+ + V + + HT A+T SG+L + G +LG L++N
Sbjct: 302 VSCPKLVEALASVHVKAV-------AFGSKHTCAVTVSGELLEWSEGAH-RLG--LLSNW 351
Query: 521 TER 523
ER
Sbjct: 352 YER 354
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 152/292 (52%), Gaps = 23/292 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G +++ G LG+GT W P+ I +L+G ++ + G T
Sbjct: 137 GEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHT 196
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ GQ++ FG +FG +G + + + P+ VESL + + A G + TA +
Sbjct: 197 ALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEV 254
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +L + +IA G+ +
Sbjct: 255 IVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASLIDYDFCRIACGHSLTVG 313
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG + S+G + G+LG+ R+D K P L+E ++ V VA G++H AV+
Sbjct: 314 LTT--SGQ-ILSMGNTVYGQLGN-PRSDGKLPCLVED--IMGEHVVQVACGSYHVAVLTN 367
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
V TWG G G LGHG+ E +P +V+AL D H+A G T + +
Sbjct: 368 KSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAICQ 419
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 152/339 (44%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + G L++ G+V+ +G++S G +G + + P+LVES
Sbjct: 68 PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LG+ T+ + P + G LE
Sbjct: 126 LAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQ 185
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V ++ G + A S +++ G G G LGHG+R PR +E L L+ +
Sbjct: 186 VAYVSCGTWH---TALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVE--SLSGLKTIA 240
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V +L D
Sbjct: 241 VACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYD 300
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G + S G N + GN ++ P LV + +
Sbjct: 301 FCRIACGHSLTVGLTTSGQILSMG---------NTVYGQLGNPRSDGKLPCLVEDI--MG 349
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E VVQ++ + H LT +++ +G G G+LG
Sbjct: 350 EHVVQVACG-----SYHVAVLTNKSEVFTWGKGANGRLG 383
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+PK +++ + HV G +V+++G+V+++G LGH + D +
Sbjct: 67 LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS--------V 118
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P+LV SL N +V HT A+T +G+LY +G G I L+ N T+
Sbjct: 119 HPRLVESLAICNVDIVACG-------EFHTCAVTTAGELYTWGDGTH---NIGLLGNGTD 168
Query: 523 RGN--PERV 529
+ P+R+
Sbjct: 169 VSHWIPKRI 177
>gi|408500850|ref|YP_006864769.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465674|gb|AFU71203.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1184
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 185/414 (44%), Gaps = 56/414 (13%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI----IQAAAGAGRTM 210
G+S+AV S G Y++G+N GQLG+GTT ++ P P+ G + +QAAAG ++
Sbjct: 690 GYSLAVGSDGKAYAWGNNKYGQLGNGTTTQQSTPVPVPKPAGTPMDFTYMQAAAGGHHSL 749
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVL 266
I G VYA+G + G + G ++P V N + +Q + G + + L
Sbjct: 750 AIGSDGYVYAWGNNDHG--QLGNNTKSNSSTPVRVHGPNNFGEGLKAIQVSAGVWSSTAL 807
Query: 267 SREGRVYTFSWGNDARLGHHTE------PNDV-EPHPLLGTLENIPVVQIAAGYCYLLAL 319
+G VYT WG+ +HTE P V +P G VQI+ + + +AL
Sbjct: 808 GADGTVYT--WGSLQSGWNHTESSPQTVPTTVKDPSDASGVFH---AVQISTHWSFDMAL 862
Query: 320 ACQPSGMAVYSVGCGLGGKLGH----GSRTDEKHP---RLIEQFQLLN-----LQPVVVA 367
VY+ G G+LG+ G+ T HP R+ Q L+ V V+
Sbjct: 863 GQD---GYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLKAVQVS 919
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQ---ALNDVKAIHVAT 420
AG HA +G+DG +WG G LG+G E+V P VQ V A+ V+
Sbjct: 920 AGVLHALAIGEDGNTWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTVTAVQVSA 979
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G Y + VV DG+ +S+G LG N+ +D V TS QI
Sbjct: 980 GSYLSLVVDTDGNTWSWGWNSYGKLGDNSTSD--RTIPGKVFASAQSTSSAGPWLNAAQI 1037
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 534
S + Y+++ A+ G A+G + GQLG N T NP V + ++
Sbjct: 1038 S---AGYFSS---AIGTDGYAKAWGRNNYGQLG----NGTTSGENPNPVPVQVA 1081
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAA 204
QA AG HS+A+ S G VY++G+N GQLG+ T P P +G++ IQ +A
Sbjct: 740 QAAAGGHHSLAIGSDGYVYAWGNNDHGQLGNNTKSNSSTPVRVHGPNNFGEGLKAIQVSA 799
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFT 263
G + + G VY +G G + T+ + +F VQ + F
Sbjct: 800 GVWSSTALGADGTVYTWGSLQSGWNHTESSPQTVPTTVKDPSDASGVFHAVQISTHWSFD 859
Query: 264 AVLSREGRVYTFSWGNDARLGHH----TEPNDVEPHP--LLGTLEN-------IPVVQIA 310
L ++G VYT+ + + +LG++ T P P + + ++ + VQ++
Sbjct: 860 MALGQDGYVYTWGYNTNGQLGNNSSDGTSTTVFHPTPSRVFASSQSTAAAGPWLKAVQVS 919
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHP---RLIEQFQLLNLQPVV 365
AG + LA+ + +S G G+LG+G+ T E +P R+ + V
Sbjct: 920 AGVLHALAIGEDGN---TWSWGMNANGELGNGTSTGEAVANPLPVRVQYPANTGTVTAVQ 976
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--------VKAIH 417
V+AG++ + VV DG +WGW YG LG + ++P V A + A
Sbjct: 977 VSAGSYLSLVVDTDGNTWSWGWNSYGKLGDNSTSDRTIPGKVFASAQSTSSAGPWLNAAQ 1036
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++ G Y + + DG ++G LG+
Sbjct: 1037 ISAG-YFSSAIGTDGYAKAWGRNNYGQLGN 1065
>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 900
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 172/385 (44%), Gaps = 55/385 (14%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V SFG N QLGH ++ P I++L G+RI+ +A G ++ +++ G VY+FG+
Sbjct: 3 VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
E + G P ++ +L + + + A GNF + L+ G++Y WG +
Sbjct: 63 --EGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIY--EWGQLHEIDK 118
Query: 286 HTE----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV------------- 328
+ P+ + +G I Q + Y A P+ +
Sbjct: 119 SAKGLEAPSGLIEMKGIGFASRI-AEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDA 177
Query: 329 ---------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--------NLQPVVVAAGAW 371
+ G GG + + +++++ QL N Q V ++AG
Sbjct: 178 EDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWA 237
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
++A V + G+V TWG+ G LG G+ +P+ V+ +V + V+ G V+S+
Sbjct: 238 YSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQ 297
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYW 488
GD++++G G LGH + + L P+ V + Q+N++V Q++ +
Sbjct: 298 GDLFTWGLGVFGQLGHGKL--------KSCLHPKKVLAFSEADQLNQKVRQVACGANF-- 347
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
T ALT G+L++FG G+ GQLG
Sbjct: 348 ---TMALTVDGRLWSFGHGEYGQLG 369
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 175/418 (41%), Gaps = 73/418 (17%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+AVT G VYSFG GQLGH P I +L RI + A G ++ +
Sbjct: 42 GEAHSLAVTEFGDVYSFGRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLAL 101
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D G++Y +G+ E + +G + +P + +K I + LS +
Sbjct: 102 TDTGKIYEWGQ--LHEIDKSAKG---LEAPSGLIEMKGIGFASRIAEQSLSQYLSGDKAA 156
Query: 273 YTFSWGNDARLGHHTEPND--------------------------------------VEP 294
Y + N + + + N+ V+
Sbjct: 157 YDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQL 216
Query: 295 HPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PLL G+++N VV ++AG+ Y + A SG V++ G G+LG G R P+ +
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAY--SAAVTKSG-KVFTWGFNEKGQLGLGDRWFHGLPQQV 273
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ F N+ V V+ G H V+ G + TWG G +G LGHG + PK V A ++
Sbjct: 274 KFFT--NVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEA 331
Query: 414 -----KAIHVATGDYTTFVVSEDGDVYSFGCGESASLG---HNAIAD---------GQGN 456
K VA G T ++ DG ++SFG GE LG N D +
Sbjct: 332 DQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNERE 391
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
H PQ V +L V +V Q++ + HT +TE +Y++G G G LG
Sbjct: 392 AHLQYAVPQQVEALASV--KVKQVTCGH-----LHTIVVTEDNDVYSWGWGASGCLGF 442
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 47/259 (18%)
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPH 295
+P LV S+KN VV + G ++A +++ G+V+T+ + +LG H P V+
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVK-- 274
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
N+ +V ++ G ++ ++ Q +++ G G+ G+LGHG HP+ +
Sbjct: 275 ----FFTNVHIVSVSCGRQHIGVISDQGD---LFTWGLGVFGQLGHGKLKSCLHPKKVLA 327
Query: 356 F---QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----------- 401
F LN + VA GA + DGR+ ++G G YG LG EE +
Sbjct: 328 FSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLG-ATEENQYRDWNRGGNGN 386
Query: 402 ----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
+VP+ V+AL VK V G T VV+ED DVYS+G G S LG
Sbjct: 387 GNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGF---- 442
Query: 452 DGQGNRHANVLTPQLVTSL 470
G+R L PQ V +L
Sbjct: 443 ---GDRKFQ-LVPQRVPAL 457
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 32/275 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P + S++ +++ +AG + ++ +G+V+ +G + G+ G+ PQ V+
Sbjct: 218 PLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQ--LGLGDRWFHGLPQQVKF 275
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE----N 303
N+ +V + G V+S +G ++T+ G +LGH + + P +L E N
Sbjct: 276 FTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLN 335
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 349
V Q+A G + +AL ++S G G G+LG +
Sbjct: 336 QKVRQVACGANFTMALTVDGR---LWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREA 392
Query: 350 ------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
P+ +E L +++ V G H VV +D V +WGWG GCLG G+ + + V
Sbjct: 393 HLQYAVPQQVEA--LASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLV 450
Query: 404 PKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSF 437
P+ V AL+ ++ G+ + VV S D ++F
Sbjct: 451 PQRVPALSGEIVSSISAGEKHSLVVRSTDTTTFAF 485
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 105/257 (40%), Gaps = 44/257 (17%)
Query: 130 KLVLRFLLAGEACCRRENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 186
K+V R L +N Q + AG +S AVT G V+++G N GQLG G
Sbjct: 209 KIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHG 268
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P+ ++ + I+ + G +ISD G ++ +G FG+ +G K P+ V
Sbjct: 269 LPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHG--KLKSCLHPKKVL 326
Query: 247 SLK-----NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE------------- 288
+ N V Q A G FT L+ +GR+++F G +LG E
Sbjct: 327 AFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGN 386
Query: 289 ------------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
P VE L ++ V Q+ G+ + + + VYS G G
Sbjct: 387 GNEREAHLQYAVPQQVE------ALASVKVKQVTCGHLHTIVVT---EDNDVYSWGWGAS 437
Query: 337 GKLGHGSRTDEKHPRLI 353
G LG G R + P+ +
Sbjct: 438 GCLGFGDRKFQLVPQRV 454
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V ++G + LGH E+ P V+Q L+ ++ + A G+ + V+E GDVYSFG G
Sbjct: 3 VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH N P ++T+L +ER+ +++ N H+ ALT++GK+
Sbjct: 63 EGQLGH--------PEKYNTAHPNVITAL--AHERITRVACG-----NFHSLALTDTGKI 107
Query: 502 YAFG---AGDKGQLGIE 515
Y +G DK G+E
Sbjct: 108 YEWGQLHEIDKSAKGLE 124
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
M+V S G +LGH D P +I+ L ++ V+ A G H+ V + G V ++
Sbjct: 1 MSVISFGVNKQSQLGHALEKDHLDPSVIQN--LSGMRIVMSACGEAHSLAVTEFGDVYSF 58
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G GR G LGH + + P V+ AL + VA G++ + +++ G +Y +G
Sbjct: 59 GRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWG 111
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 1670
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 1671 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 1728
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 1785
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 1843
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 1904 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 1940
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 1709 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 1768
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 1769 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 1826
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 1827 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVIIEDVAV 1878
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 1879 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 1933
Query: 372 HAA 374
H+A
Sbjct: 1934 HSA 1936
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 1668
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 1669 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 1726
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 1727 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 1782
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 1783 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 1842
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 1843 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 1887
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 1888 SNGDVYAWGSNSEGQLGLGHTNHVRE 1913
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 1629 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1688
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 1689 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 1746
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 1747 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 1793
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 1794 GDYGKLGL---GNSTAKSSPQKIDV 1815
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 16/312 (5%)
Query: 141 ACCR---RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 197
+CC R + G HS+ + G VY+ GSNS GQLGH RP + +L
Sbjct: 27 SCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS--RPELVGALDAQ 84
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+I + G ++ +++ GQV+A+G G+ G + V P+L++ L + Q
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEAVRVPRLIKKLCEHRISQVM 143
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
GN LS++G+++ + + +LG EP+ + P P L +L IP+ QI+AG +
Sbjct: 144 CGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQP-LKSLCGIPLTQISAGGDHS 202
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 375
AL+ SG AV+ G G+LG D P I + L Q VV ++ G H A
Sbjct: 203 FALSF--SG-AVFGWGKNSAGQLGLNDEQDRAVPCHI---KFLRSQKVVYISCGEEHTAA 256
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDV 434
+ ++G + T+G G G LGH + E +P+ V L + +A G ++T V G +
Sbjct: 257 LTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLI 316
Query: 435 YSFGCGESASLG 446
Y+FGC LG
Sbjct: 317 YAFGCNTQGQLG 328
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 119/225 (52%), Gaps = 11/225 (4%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 201
C SQ + G H IA++ G ++ +G NSSGQLG G E P+P++SL GI + Q
Sbjct: 135 CEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQ 194
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+AG + +S +G V+ +GK+S G + G+ + P ++ L++ VV + G
Sbjct: 195 ISAGGDHSFALSFSGAVFGWGKNSAG--QLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
TA L++EG ++TF G+ +LGH + N+ P ++ L V QIA G + LA
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFV- 310
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
PS +Y+ GC G+LG G R K P + N+QP+ +
Sbjct: 311 -PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVS-----NIQPLCI 349
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 27/352 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++ +GS+ +GQLG G +E + PR G + + A G ++ + G VY G
Sbjct: 1 MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+S G+ + G++ P+LV +L + + G + ++ +G+V+ + G+ +L
Sbjct: 61 NSCGQLGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G T V L+ L + Q+ G + +AL+ ++ G G+LG G
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALS---KDGQLFVWGENSSGQLGLGK 173
Query: 344 -RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
P+ ++ L + ++AG H+ + G V WG G LG +E+ +
Sbjct: 174 GEPSTLSPQPLKS--LCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
VP ++ L K ++++ G+ T ++++G +++FG G LGH++ N
Sbjct: 232 VPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDST--------RNEP 283
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
P+ V L + V QI+ + HT A S G +YAFG +GQLG
Sbjct: 284 LPRRVMEL--MGTEVSQIACGRN-----HTLAFVPSTGLIYAFGCNTQGQLG 328
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV +G V+++G+ GQLG GT EE R PR I+ L RI Q G +
Sbjct: 92 GQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S GQ++ +G++S G+ G +G SPQ ++SL I + Q + G + LS G
Sbjct: 152 LSKDGQLFVWGENSSGQLGLG-KGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGA 210
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V F WG ++ +LG + E + P H + L + VV I+ G + AL + +
Sbjct: 211 V--FGWGKNSAGQLGLNDEQDRAVPCH--IKFLRSQKVVYISCGEEHTAALTKEG---GL 263
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGW 387
++ G G G+LGH S +E PR + +L+ + +A G H A V G + +G
Sbjct: 264 FTFGNGSKGQLGHDSTRNEPLPRRV--MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGC 321
Query: 388 GRYGCLGHG 396
G LG G
Sbjct: 322 NTQGQLGTG 330
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 25/268 (9%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ A GN + L +G VYT + +LGH + E L+G L+ + ++ G
Sbjct: 38 EVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPE---LVGALDAQKISGVSCGQA 94
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LA+ Q V++ G G GG+LG G+ + + PRLI++ L + V G H
Sbjct: 95 HSLAVNEQGQ---VFAWGAGDGGQLGLGTAEEAVRVPRLIKK--LCEHRISQVMCGNHHC 149
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ +DG++ WG G LG G E ++ P+ +++L + ++ G +F +S G
Sbjct: 150 IALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSG 209
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
V+ +G + LG N D H L Q +VV IS HT
Sbjct: 210 AVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ----------KVVYISCGEE-----HT 254
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQ 520
ALT+ G L+ FG G KGQLG + N+
Sbjct: 255 AALTKEGGLFTFGNGSKGQLGHDSTRNE 282
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
++ C +Q AG HS A++ G V+ +G NS+GQLG ++ P I+ L+ ++
Sbjct: 185 KSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKV 244
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ + G T ++ G ++ FG S G + G T+ P+ V L V Q A G
Sbjct: 245 VYISCGEEHTAALTKEGGLFTFGNGSKG--QLGHDSTRNEPLPRRVMELMGTEVSQIACG 302
Query: 260 -NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
N A + G +Y F +LG + P P+
Sbjct: 303 RNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPV 341
>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
Length = 1080
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 162/339 (47%), Gaps = 44/339 (12%)
Query: 147 NSQAIAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
NS ++A G +AV S+ G +Y +G NS GQLG G + PR +++LQG + A
Sbjct: 112 NSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVKALQGKIVKVVACA 171
Query: 206 AGRTMLISDAGQVYAFGKDSFGE-----------AEYGV--------QGTK--------L 238
T+ D G YA+G G A GV +G + L
Sbjct: 172 QEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPTKGARTEPLASACL 231
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLS----REGRVYTFSWGNDARLGHHTEPNDVEP 294
V +P+++ESL F+ A G + TA L + ++T G + RLGH E + P
Sbjct: 232 VCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHLP 291
Query: 295 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLI 353
P+ LEN+ + IA G + AC SG +Y G GKLG GS R + P+ +
Sbjct: 292 TPVH-ALENLNITAIACGAHHT---ACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHV 347
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALN 411
L N V VA G+ H+A V DG + TWG GR LGH E E +P+ V+AL
Sbjct: 348 GG-PLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEFLPRRVEALV 404
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
+ IHV GD T + E+G+V+++G S LGH +
Sbjct: 405 GLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGDL 441
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 164/370 (44%), Gaps = 52/370 (14%)
Query: 168 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
SF ++ S + T+ E PR + +L+GI AAG + ++S +G++Y +G +S
Sbjct: 82 SFSASPSLAVFAETSLESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNS-- 139
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH- 286
E + G + + P++V++L+ V A T +G Y + + RLG H
Sbjct: 140 EGQLGTGDRRDASVPRVVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHG 199
Query: 287 ------------------TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC------- 321
T+ EP + V++ GY ++ +AC
Sbjct: 200 LSIPSSAGLGVSAPPGAPTKGARTEPLASACLVCTPRVLESLCGY-FITDVACGIYHTAF 258
Query: 322 ----QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+ ++++ G GL G+LGHG D P + + LN+ +A GA H A V
Sbjct: 259 LGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHLPTPVHALENLNI--TAIACGAHHTACVT 316
Query: 378 QDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVY 435
G + WG +G LG G+ + +PK V L + + VA G + V+ DG++Y
Sbjct: 317 SGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELY 376
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G LGH QG ++ P+ V E +V + + + + +AHT +
Sbjct: 377 TWGQGRR--LGHEV----QG--ESDEFLPRRV-------EALVGLFVIHVVCGDAHTACI 421
Query: 496 TESGKLYAFG 505
E+G ++A+G
Sbjct: 422 VENGNVWAWG 431
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 55/324 (16%)
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
+SP+LV++LK I A G AV+S+ G +Y + ++ +LG + P ++
Sbjct: 100 SSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPR-VVK 158
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------- 340
L+ +V++ A C C + Y+ GC L G+LG
Sbjct: 159 ALQGK-IVKVVA--CAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPG 215
Query: 341 ---HGSRTDEKH-------PRLIEQFQLLNLQPVVVAAGAWHAAVVG----QDGRVCTWG 386
G+RT+ PR++E L VA G +H A +G + T G
Sbjct: 216 APTKGARTEPLASACLVCTPRVLES--LCGYFITDVACGIYHTAFLGVYEQHKTSLFTCG 273
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LGHG+EE +P V AL ++ +A G + T V+ G +Y +G LG
Sbjct: 274 LGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLYMWGGAAFGKLG 333
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ R + +L + L+ N+ VV ++L + H+ +T G+LY +G
Sbjct: 334 LGS------TRGSQLLPKHVGGPLR--NKTVVSVALGSQ-----HSACVTTDGELYTWGQ 380
Query: 507 GDKGQLGIELVNNQTERGNPERVD 530
G + LG E V +++ P RV+
Sbjct: 381 GRR--LGHE-VQGESDEFLPRRVE 401
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRS-LQGIRIIQAA 203
N AIA G H+ VTS G +Y +G + G+LG G+T + P+ + L+ ++ A
Sbjct: 301 NITAIACGAHHTACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVA 360
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G+ + ++ G++Y +G+ + VQG P+ VE+L +FV+ G+ T
Sbjct: 361 LGSQHSACVTTDGELYTWGQGR--RLGHEVQGESDEFLPRRVEALVGLFVIHVVCGDAHT 418
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP----LLGTLENIPVVQIAAGYCYLLAL 319
A + G V+ +WG LGH D+E P L L VVQ++ + A
Sbjct: 419 ACIVENGNVW--AWGTSRILGH----GDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAAF 472
Query: 320 ACQP 323
C P
Sbjct: 473 -CDP 475
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 166/351 (47%), Gaps = 32/351 (9%)
Query: 169 FGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR G ++ G T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+++++ G+D +LG +
Sbjct: 64 GQLGH----EKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLN 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGS 343
V + L ++ + Q+A GY + AL+ G V+S G G+LG HGS
Sbjct: 120 NFEECVRVPRNIKCLSDVQIAQVACGYRHSHALS---KGGQVFSWGQNQFGQLGLGMHGS 176
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
P++I+ Q + ++AG H+ + G V WG ++G LG +
Sbjct: 177 SIST--PQIIQSLQ--GIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWF 232
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P ++++L + I+V+ G+ T ++++G V++FG G LGHN+ N N
Sbjct: 233 PALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEIN--- 284
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
P+ V L + V QIS HT A T SGK+Y+FG G GQLG
Sbjct: 285 PRKVFEL--MGNIVTQISCGRQ-----HTLAFTPSSGKMYSFGLGGNGQLG 328
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ + G VY+ G N GQLGH + +P + +L I+ + G T+ +
Sbjct: 42 GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRK--KPEHVVALDAQIIVAVSGGESHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQ++++G S G+ G+ + V P+ ++ L ++ + Q A G + LS+ G+
Sbjct: 100 NDKGQIFSWGLGSDGQL--GLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQ 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V FSWG + +LG + + ++ +L+ IP Q++AG + A+ SG AV+
Sbjct: 158 V--FSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL--SG-AVF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + + V+ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDTNDRWFPALLK--SLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLG 446
YG LGH + E P+ V L ++ G T + G +YSFG G + LG
Sbjct: 271 YGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 10/206 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q G HS A++ G V+S+G N GQLG HG++ P+ I+SLQGI Q +A
Sbjct: 140 AQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFAQLSA 197
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + I+ +G V+ +G++ FG+ G+ T P L++SL++ V+ + G TA
Sbjct: 198 GGAHSFAITLSGAVFGWGRNKFGQL--GLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTA 255
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
L++EG V+TF G +LGH++ +++ P + + NI V QI+ G + LA PS
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNI-VTQISCGRQHTLAFT--PS 312
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG S + K P
Sbjct: 313 SGKMYSFGLGGNGQLGTRSTCNRKSP 338
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A+T G V+ +G N GQLG T + W P ++SL+ R+I + G
Sbjct: 193 AQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T ++ G V+ FG +G+ G T +P+ V L V Q + G T A
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFT 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G++Y+F G + +LG + N P P+ G
Sbjct: 311 PSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKG 343
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 43/300 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 211
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 266
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 523
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 316
G+++T+ G+ +RLGH D EP + + L Q+A G+
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 579
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLIEQFQLLNLQPVVVAA 368
+AL SG VY++G + G+LG+ +R D K H +E+ +A
Sbjct: 580 VALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE----------IAC 626
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
GA+H AV+ V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 627 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+ +++G++S G +GV V P+L+++
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDA 394
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + A G + + ++ G +YT+ G+ LGH E + P + +E I V
Sbjct: 395 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 454
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + S +++ G G G LGHG R PR ++ L L+ V A
Sbjct: 455 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 509
Query: 368 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
G WH A V + G++ TWG G LGHG++E + VP V AL +
Sbjct: 510 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 569
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T ++ G VY+ G LG N HA+ P V +
Sbjct: 570 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV-------D 613
Query: 476 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
+ S I A H LT ++Y +G G G+LG
Sbjct: 614 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 652
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 40/306 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G +++++G +FSWG ++ RLGH + N P L+
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 393
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ SG +Y+ G G G LGHG+ P+ + F +
Sbjct: 394 ALNTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 449
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ +A G +H AVV G++ T+G G +G LGHG+ + +P+ V +L ++ + A
Sbjct: 450 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 509
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ + LGH G++ L P V
Sbjct: 510 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 561
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N + P
Sbjct: 562 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 610
Query: 528 RVDIDL 533
RVD L
Sbjct: 611 RVDGKL 616
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G
Sbjct: 454 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 513
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G +G + KLV P V +L Q
Sbjct: 514 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQ 571
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G VYT +LG+ V P + G L V +IA G +
Sbjct: 572 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEIACGAYH 630
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 631 VAVLT---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC 687
Query: 371 WHAAVVGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHV 418
H G D +C+ + R+ C G C S K A N K V
Sbjct: 688 LHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRV 747
Query: 419 ATGDYTTFVVSEDGDVYSFGC---GESASLGHNAI---------ADGQGNRHANVLTPQL 466
+ + + D S ES + G +AI +DGQ R + L
Sbjct: 748 CDRCFNKLKKAMETDPSSHSSLSRRESVNQGSDAIDRDEKLDTRSDGQLARFS------L 801
Query: 467 VTSLKQVNER 476
+ ++QV+ R
Sbjct: 802 LEPMRQVDSR 811
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 331 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 388
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PK++ ALN VA G+Y + V+ GD+Y++G G+ LGH GN ++ +
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH-------GNEVSHWVP 441
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K+VN + I +++ HT +T +G+L+ FG G G LG
Sbjct: 442 -------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 484
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 181/365 (49%), Gaps = 43/365 (11%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+N AIA G H++A+ G V+S+G+N+ GQLG+GT + + P ++ L +++A
Sbjct: 393 DNVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEA-- 450
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G+ ++ + G V+ +G F E+ + + TK + SP ++ K + + A G +
Sbjct: 451 GSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQP 323
VL ++G ++ GND T+ + V L L+NI V+ IAAGY + LA+
Sbjct: 508 VLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG 564
Query: 324 SGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQDG 380
+ V+S G L K +K+ E+ ++ L VV VAAG +H+ + +DG
Sbjct: 565 T---VWSWGDTNLDNK--------KKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG 613
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V +WG+ YG LG+G E VP V+ LN+V AI A GDY + + +DG V+ +G
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGSN 671
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG I P V L + VV I+ ++ H+ AL + G
Sbjct: 672 IRGQLGRRNIEFST--------VPLKVEKL----DNVVAIAAGDT-----HSVALKKDGT 714
Query: 501 LYAFG 505
++ +G
Sbjct: 715 VWVWG 719
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 192/414 (46%), Gaps = 53/414 (12%)
Query: 131 LVLRFL---LAGEACCRRENSQAI-----------AGPGHSIAVTSKGVVYSFGSNSSGQ 176
L+ FL L+ +ENS+ + AG H++A+ G V+++G N GQ
Sbjct: 14 LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQ 73
Query: 177 LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 236
LG+GT ++ P ++ L+ ++ +AG ++ + G V+ +G ++G+ + V
Sbjct: 74 LGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVY-- 129
Query: 237 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
+ T+P V+ LKNI + A G F+ + +G V+ + N LG + P
Sbjct: 130 RDFTTPVKVKELKNIVAIAA--GWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVK 187
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ G + VV ++AG + LAL + V+S G G+LG+ R E + +
Sbjct: 188 VKGLKD---VVAVSAGLYHSLALKRDGT---VWSWGYNEDGELGN--RPTEDYTVSVP-V 238
Query: 357 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
++ L V+ ++AG +H+ + +DG V WG G +G + +P ++ LN V A
Sbjct: 239 RVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGI--IEKNGKIDNSYIPVRIRWLNKVVA 296
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
I A G + + +DG V+ +G LG N H+ +L V LK
Sbjct: 297 I--AAGYRHSIALKDDGTVWVWGHNSYGVLGSNV------GEHSFLLVQ--VKGLKN--- 343
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
VV ++ H+ ALT++G ++A+G GQLG E NN P +V
Sbjct: 344 -VVAVAAG-----RLHSVALTKNGTIWAWGNNAFGQLGRE--NNSFSLNLPYKV 389
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 66/339 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+S+G N G+LG+ TE+ P+R +I +AG ++
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIA 258
Query: 212 ISDAGQVYAFG--------------------------------------KDS-----FGE 228
++ G V+ +G KD +G
Sbjct: 259 LNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGH 318
Query: 229 AEYGVQGTKLVTSPQL---VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RL 283
YGV G+ + L V+ LKN VV A G + L++ G ++ +WGN+A +L
Sbjct: 319 NSYGVLGSNVGEHSFLLVQVKGLKN--VVAVAAGRLHSVALTKNGTIW--AWGNNAFGQL 374
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G + + L+N VV IA G + LA+ + V+S G G+LG+G+
Sbjct: 375 GRENNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGT---VWSWGANNKGQLGNGT 429
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES- 402
P ++ V+V AG+ H+ V +DG V WG+ ++ S
Sbjct: 430 YKSSYIPTCVKGLN----NAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSP 485
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+P + LND+ I A G V+ +DG+++ GCG
Sbjct: 486 LPIKIGKLNDITEI--AGGLDYILVLRKDGNIW--GCGN 520
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 43/300 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTML 211
G HS AVT G +Y++G G LGHG W P+ + L +GI + A G T +
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL----- 266
++ AGQ++ FG +FG +G + K V P+ V+SLK + V+AA G + TA +
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 489
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 316
G+++T+ G+ +RLGH D EP + + L Q+A G+
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCVAALVEPNFCQVACGHSLT 545
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLIEQFQLLNLQPVVVAA 368
+AL SG VY++G + G+LG+ +R D K H +E+ +A
Sbjct: 546 VALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEE----------IAC 592
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
GA+H AV+ V TWG G G LGHG+ + + P +V++L D + +A G T V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 36/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+ +++G++S G +GV V P+L+++
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDA 360
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + A G + + ++ G +YT+ G+ LGH E + P + +E I V
Sbjct: 361 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 420
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
IA G + + S +++ G G G LGHG R PR ++ L L+ V A
Sbjct: 421 SIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LKGLRTVRAA 475
Query: 368 AGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
G WH A V + G++ TWG G LGHG++E + VP V AL +
Sbjct: 476 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF 535
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T ++ G VY+ G LG N HA+ P V +
Sbjct: 536 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV-------D 579
Query: 476 RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
+ S I A H LT ++Y +G G G+LG
Sbjct: 580 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 618
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 40/306 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G +++++G +FSWG ++ RLGH + N P L+
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 359
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +A G + A+ SG +Y+ G G G LGHG+ P+ + F +
Sbjct: 360 ALNTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 415
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ +A G +H AVV G++ T+G G +G LGHG+ + +P+ V +L ++ + A
Sbjct: 416 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 475
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ + LGH G++ L P V
Sbjct: 476 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 527
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N + P
Sbjct: 528 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 576
Query: 528 RVDIDL 533
RVD L
Sbjct: 577 RVDGKL 582
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG + + PR + SL+G+R ++AA G
Sbjct: 420 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 479
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G +G + KLV P V +L Q
Sbjct: 480 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQ 537
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G VYT +LG+ V P + G L V +IA G +
Sbjct: 538 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEIACGAYH 596
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P L+E + ++ + AA
Sbjct: 597 VAVLT---SRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC 653
Query: 371 WHAAVVGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHV 418
H G D +C+ + R+ C G C S K A N K V
Sbjct: 654 LHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRV 713
Query: 419 ATGDYTTFVVSEDGDVYSFGC---GESASLGHNAI---------ADGQGNRHANVLTPQL 466
+ + + D S ES + G +AI +DGQ R + L
Sbjct: 714 CDRCFNKLKKAMETDPSSHSSLSRRESVNQGSDAIDRDEKLDTRSDGQLARFS------L 767
Query: 467 VTSLKQVNER 476
+ ++QV+ R
Sbjct: 768 LEPMRQVDSR 777
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ D P+ +E +L++Q + A G HA +V + G +WG G LGHG +
Sbjct: 297 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 354
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PK++ ALN VA G+Y + V+ GD+Y++G G+ LGH GN ++ +
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH-------GNEVSHWVP 407
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K+VN + I +++ HT +T +G+L+ FG G G LG
Sbjct: 408 -------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 450
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 157/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + ++Q A G L++ G+++ +G++S G +GV K V P LVE+
Sbjct: 333 PKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGV--GKNVVQPCLVEA 390
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L + V A G F T ++ G +YT+ G N LGH T+ + P + G LE +
Sbjct: 391 LASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL- 449
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q+A C A S +++ G G G LGHG R + +PR +E L L+ V
Sbjct: 450 --QVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVES--LSGLRTVS 505
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A + + G++ TWG G LGHG+++ P + AL D
Sbjct: 506 VACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYN 565
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V++ G LG N +DG+ P LV K
Sbjct: 566 FHRIACGHSLTVGLTTSGRVFTMGSTVYGQLG-NPQSDGK--------LPCLVED-KLAG 615
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +I+ Y H LT ++Y +G G G+LG
Sbjct: 616 ECVEEIAC--GAY---HVTVLTSRNEVYTWGKGANGRLG 649
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 402 GEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHT 461
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG +FG +G + ++ P+ VESL + V A G + TA +
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDREN--ISYPREVESLSGLRTVSVACGVWHTAAIVEV 519
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + +EP + L + +IA G+ +
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEP-TCISALIDYNFHRIACGHSLTVG 578
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V+++G + G+LG+ ++D K P L+E +L +A GA+H V+
Sbjct: 579 LTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 676
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E PR + SL G+R + A G T I
Sbjct: 457 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAI 516
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +G+++ +G +G + +L P + +L + + A G+
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL--EPTCISALIDYNFHRIACGHS 574
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ GRV+T +LG+ + P + L V +IA G ++ L
Sbjct: 575 LTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL-PCLVEDKLAGECVEEIACGAYHVTVLT- 632
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ +A G+ ++A +
Sbjct: 633 --SRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVK--YIACGSNYSAAI 683
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 168/371 (45%), Gaps = 29/371 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +G N GQLG + PR SL + G ++D G+VYA G +
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895
Query: 226 FGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDA 281
G G+ + V +P + SL + I V + AI G ++ +G +Y + G D
Sbjct: 3896 HGR--LGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDG 3953
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG T N PH L+ +L++ V+ G + AC ++Y+ G G G+LGH
Sbjct: 3954 KLGLGTTVNMNVPH-LIESLKSKHVIDAGCGSSHS---ACITDDGSLYTWGKGRYGRLGH 4009
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
+ P+L+ + + V +G G V +WG G YG LG G E
Sbjct: 4010 NDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGS 4069
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VPK + +L I + G + ++ G VY++G G+ LGH D R
Sbjct: 4070 KVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGH---GDDSHQR---- 4122
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
TP+ V L +E V+ I + H TESGK++++G D+GQ+G N+ T
Sbjct: 4123 -TPRRVLGL-LAHENVIDIGCG-----SLHCIVCTESGKVFSWGDNDEGQIG----NDTT 4171
Query: 522 ERGN-PERVDI 531
+ + P+R++I
Sbjct: 4172 QAVSVPKRINI 4182
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 14/276 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T G VYS+G S+G LG G TE + P + +L G RI+ +AG+ + +++
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVY 273
G +Y +GK S+G +G KL+ P +VE L + +VQ G+ T L G+V+
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLI--PTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVW 636
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LG + P P+ G PVV+I G +AL +YS GC
Sbjct: 637 SWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALT---KDGKLYSWGC 693
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYG 391
G +LGHG++ + P+LIE + VV V+ GA H + D V WG
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLS----ETVVSDVSVGAQHCVALTTDSDVYAWGKNSSF 749
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
+ + S P +++A + A+ +A G TFV
Sbjct: 750 EVNESGDIISS-PLMIEAASGKGALLIACGASETFV 784
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 11/296 (3%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAA--AGAGRTMLIS 213
AVT G VY+ G + G+LG G+++ P P+ SL +GI + + A +G + ++
Sbjct: 3880 FAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVT 3939
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G++YA+G+ G + G+ T + P L+ESLK+ V+ A G+ +A ++ +G +Y
Sbjct: 3940 TQGELYAWGEGEDG--KLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLY 3997
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
T+ G RLGH+ +P L+ L+ V +A G L SG V+S G
Sbjct: 3998 TWGKGRYGRLGHNDHETQHKPK-LVSALKGEQVTCVACGSGDAQTLCATASG-CVFSWGD 4055
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G GKLG G K P+ I+ L + + G+ + + G V TWG G Y L
Sbjct: 4056 GDYGKLGRGGNEGSKVPKKID--SLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRL 4113
Query: 394 GHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
GHG++ + P +V+ L I + G V +E G V+S+G + +G++
Sbjct: 4114 GHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGND 4169
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +AVT++G +Y++G G+LG GTT P I SL+ +I A G+ +
Sbjct: 3930 SGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSAC 3989
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+D G +Y +GK +G + T+ P+LV +LK V A G+ L
Sbjct: 3990 ITDDGSLYTWGKGRYGRLGHNDHETQ--HKPKLVSALKGEQVTCVACGSGDAQTLCATAS 4047
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
FSWG+ +LG P + +L V+++ G + +AL + VY
Sbjct: 4048 GCVFSWGDGDYGKLGRGGNEGSKVPKK-IDSLTGKHVIKLLCGSQFSMALT---TAGHVY 4103
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G +LGHG + ++ PR + LL + V+ + G+ H V + G+V +WG
Sbjct: 4104 TWGKGDYYRLGHGDDSHQRTPRRV--LGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDN 4161
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G +G+ + SVPK + +++ HVA G
Sbjct: 4162 DEGQIGNDTTQAVSVPKRINITDNICIDHVACG 4194
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 176/387 (45%), Gaps = 24/387 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG-AG 207
Q G S V+ G V++ G SSG+LG G P I SL + + A AG
Sbjct: 2962 QFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAG 3021
Query: 208 RTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
R +L ++ G+V+++G +G+ +G + P+++E + + + + G +A +
Sbjct: 3022 RHVLAVTADGKVFSWGDGQYGQLGHG--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAV 3079
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
S G ++T+ G D RLGH N +P L+ LE + + +A G LA +
Sbjct: 3080 SVNGELFTWGQGADGRLGHGDSNNQTKPK-LVRALEKVRISCVACGSRNAHTLAAGDN-- 3136
Query: 327 AVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
++++ G G GKLG GS + + ++I + + G + ++ ++G+V T
Sbjct: 3137 SLWAWGDGSFGKLGLKDGSSSTDVPVQVIT----FPSNIIQIECGMHFSVLLTKEGKVYT 3192
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G Y LG+ + + +P +V L VA G ++ G+VYS+G E
Sbjct: 3193 WGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQ 3252
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
G+N+ NR PQ+V SLK R+ +I+ +S +LT + K
Sbjct: 3253 QGNNSTI---CNRK-----PQIVASLK--GHRICKIACGSSHSIAFAQGSLTTAVKFSPI 3302
Query: 505 G-AGDKGQLGIELVNNQTERGNPERVD 530
+ K LG +V+ ++ E D
Sbjct: 3303 SFSNSKDPLGASIVHGKSSDDAKETKD 3329
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 175/362 (48%), Gaps = 35/362 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V+ +G N QLG +E + + P R+L + IQ A G+ + ++SD G+V+A G+
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDA 281
S G G+ G + P + SL V + A+ G AV + +G+V+++ G
Sbjct: 2986 SSG--RLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAV-TADGKVFSWGDGQYG 3042
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + + P ++ + + +++ G + A++ +++ G G G+LGH
Sbjct: 3043 QLGHGSLQSYDRPK-MIEIFQAKHIREVSCGTGHSAAVSVNGE---LFTWGQGADGRLGH 3098
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--HGNEE 399
G ++ P+L+ + + + V + H G D + WG G +G LG G+
Sbjct: 3099 GDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAG-DNSLWAWGDGSFGKLGLKDGSSS 3157
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+ +V+ +++ I + G + + +++++G VY++G GE LG+++ +
Sbjct: 3158 TDVPVQVITFPSNI--IQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQP----- 3210
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
P LV L ++ + Q+++ H ALT SG++Y++G + GQ G NN
Sbjct: 3211 ---IPTLVDGL--ASKTITQVAVG-----ALHCLALTSSGEVYSWGDNEHGQQG----NN 3256
Query: 520 QT 521
T
Sbjct: 3257 ST 3258
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+ P H + +T G V+ S G T E+ + P +Q I +
Sbjct: 470 SSPKHRVVLTVHGTVFYVMDASMGDF---TVEQLFFPGDEEIIQ----IDHNPSGNHILA 522
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G+VY++G+ S G G+ T+ T+P V +L +V + G+ +A ++ +G
Sbjct: 523 LTKDGKVYSWGQGSNGV--LGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGV 580
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+YT+ G+ RLGH + + P + G L + +VQ+ G LA +G V+S
Sbjct: 581 LYTWGKGSYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTGQ-VWSW 638
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G GKLG K P+ I + PVV + G + + +DG++ +WG G
Sbjct: 639 GDGDYGKLGRPGSDQNKVPKPISGIG--STSPVVKIICGNQISMALTKDGKLYSWGCGDT 696
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
LGHGN+E PK+++ L++ V+ G ++ D DVY++G S
Sbjct: 697 YQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSS 748
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 18/188 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G G G LG G+ + P + L + V ++AG+ H+A V +DG + TWG
Sbjct: 529 VYSWGQGSNGVLGIGNTESQTAPTAVAA--LSGDRIVHISAGSMHSAAVTEDGVLYTWGK 586
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHV--ATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LGHGN E + +P +V+ LN VK + V +GD T + + G V+S+G G+ L
Sbjct: 587 GSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKL 646
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G G+ V P+ ++ + + VV+I N I + ALT+ GKLY++G
Sbjct: 647 GR------PGSDQNKV--PKPISGIGSTSP-VVKIICGNQI-----SMALTKDGKLYSWG 692
Query: 506 AGDKGQLG 513
GD QLG
Sbjct: 693 CGDTYQLG 700
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
GN A L+++G+VY++ G++ LG + P + L +V I+AG + +
Sbjct: 517 GNHILA-LTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMH--S 572
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
A G+ +Y+ G G G+LGHG+ D+ P ++E + + V +G H +
Sbjct: 573 AAVTEDGV-LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 437
G+V +WG G YG LG + VPK + + + + G+ + +++DG +YS+
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
GCG++ LGH GN+ +V P+L+ L + V + H ALT
Sbjct: 692 GCGDTYQLGH-------GNQE-HVRQPKLIEGLSETVVSDVSVGA-------QHCVALTT 736
Query: 498 SGKLYAFG 505
+YA+G
Sbjct: 737 DSDVYAWG 744
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H + +DG+V +WG G G LG GN E ++ P V AL+ + +H++ G + V+ED
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G +Y++G G LGH D L P +V L V ++VQ+ + +AH
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDK--------LIPTIVEGLNGV--KIVQVDCGSG---DAH 625
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T AL ++G+++++G GD G+LG
Sbjct: 626 TLALDDTGQVWSWGDGDYGKLG 647
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
S +V+ G G+LG K PRL E LN P ++ G V DG+V
Sbjct: 3832 STFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELN--PAMITGGEQTLFAVTDDGKVY 3889
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFGC 439
G+ +G LG G+ + + P + +L VK I + +G V+ G++Y++G
Sbjct: 3890 ASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
GE LG N+ P L+ SLK ++ V+ +S H+ +T+ G
Sbjct: 3950 GEDGKLGLGTT--------VNMNVPHLIESLK--SKHVIDAGCGSS-----HSACITDDG 3994
Query: 500 KLYAFGAGDKGQLG 513
LY +G G G+LG
Sbjct: 3995 SLYTWGKGRYGRLG 4008
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ I G S+A+T G +YS+G + QLGHG E +P+ I L + + GA
Sbjct: 671 KIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQH 730
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
+ ++ VYA+GK+S E + +++SP ++E+
Sbjct: 731 CVALTTDSDVYAWGKNSSFEVN---ESGDIISSPLMIEA 766
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H +A+TS G VYS+G N GQ G+ +T +P+ + SL+G RI + A G+
Sbjct: 3224 TQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSS 3283
Query: 208 RTMLISDAGQVYA--FGKDSF-------------GEAEYGVQGTKLVTSP---QLVESLK 249
++ + A F SF G++ + TK P Q++ SLK
Sbjct: 3284 HSIAFAQGSLTTAVKFSPISFSNSKDPLGASIVHGKSSDDAKETKDKERPSLTQIIISLK 3343
Query: 250 NIFVVQAAIGNFFTAV 265
Q A+G+ TA+
Sbjct: 3344 QHSKRQEALGHVLTAL 3359
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAG 207
+ + G S+A+T+ G VY++G +LGHG + PR + L +I G+
Sbjct: 4085 KLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSL 4144
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ +++G+V+++G + E + G T+ V+ P+ + NI + A G+ + S
Sbjct: 4145 HCIVCTESGKVFSWGDND--EGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIAWS 4202
Query: 268 REGR 271
+ R
Sbjct: 4203 SKQR 4206
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 183/401 (45%), Gaps = 60/401 (14%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWR----------PRPIRSLQGIRIIQAAAGAGRTML 211
S+ VV +FG N GQLG G P+ I +L I+ + G+ TM
Sbjct: 4 SECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMA 63
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSRE 269
++ +G VY++G S G+ +G K++ PQ + + + V + G +A ++++
Sbjct: 64 LTSSGAVYSWGWGSMGQLGHG--DLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKD 121
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIP-------VVQIAAGYCYLLALAC 321
G +Y WG ++ G P + E H L +P +V+++ G + AL
Sbjct: 122 GTLYV--WG-ESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT- 177
Query: 322 QPSGMAVYSVGCGLGGKLGHGS----------RTDEKHPRLIEQFQLLNLQPVV-VAAGA 370
S VY G G G+LG GS P L++ F N + VV VA GA
Sbjct: 178 --SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAF---NGEKVVQVACGA 232
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
+H+A V + G V WG YG LG G + +PK ++ +D+ + V+ G + T VV++
Sbjct: 233 FHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAK 292
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
GD Y+FG GE LG + D + P LV +LK + V+Q + S
Sbjct: 293 SGDCYAFGRGEYGRLG---LGDTKSRTR-----PHLVKALK--GKTVIQAACGGS----- 337
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
HT +T G Y G D G+LG+ + G P R+D+
Sbjct: 338 HTLFVTSDGTAYVAGRPDHGRLGLA---DMKALGVPTRLDL 375
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 141/310 (45%), Gaps = 22/310 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRTM 210
G H++A+TS G VYS+G S GQLGHG + P+ I + R + + G +
Sbjct: 57 GSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSA 116
Query: 211 LISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ G +Y +G+ +G+ EY L + E +V+ + G TA L
Sbjct: 117 AVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAAL 176
Query: 267 SREGRVYTFSWGNDARLG----HHTEPND------VEPHPLLGTLENIPVVQIAAGYCYL 316
+ GRVY + G+ +LG +P + PH LL VVQ+A G +
Sbjct: 177 TSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPH-LLKAFNGEKVVQVACGAFHS 235
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
A+ Q VY G G LG G +D++ P+ +E F ++ + V+ G WH VV
Sbjct: 236 AAVTEQGH---VYVWGKEDYGMLGVGQSSDQQIPKRLEYFD--DIPVLRVSCGGWHTVVV 290
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G +G G YG LG G+ + + P +V+AL I A G T V+ DG Y
Sbjct: 291 AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYV 350
Query: 437 FGCGESASLG 446
G + LG
Sbjct: 351 AGRPDHGRLG 360
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS AVT +G VY +G G LG G + ++ P+ + I +++ + G
Sbjct: 227 QVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWH 286
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T++++ +G YAFG+ +G G+ TK T P LV++LK V+QAA G T ++
Sbjct: 287 TVVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTS 344
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+G Y + RLG P L L IPV Q +AG + +AL
Sbjct: 345 DGTAYVAGRPDHGRLGLADMKALGVPTRL--DLGPIPVRQFSAGGAHSVAL 393
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQ-----GI 197
R E G HS AVT G +Y +G + GQLG E P++ G
Sbjct: 102 RLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGE 161
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--------VTSPQLVESLK 249
I++ + G T ++ G+VY +G+ G+ G K + P L+++
Sbjct: 162 TIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFN 221
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
VVQ A G F +A ++ +G VY + + LG + +D + L ++IPV+++
Sbjct: 222 GEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLG-VGQSSDQQIPKRLEYFDDIPVLRV 280
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
+ G + + +A SG Y+ G G G+LG G P L++ + + + A G
Sbjct: 281 SCGGWHTVVVA--KSG-DCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTV--IQAACG 335
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
H V DG G +G LG + + VP
Sbjct: 336 GSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVP 370
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ V G Y+FG G+LG G T+ RP +++L+G +IQAA G T+ ++
Sbjct: 286 HTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSD 345
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
G Y G+ G G+ K + P ++ L I V Q + G + L R
Sbjct: 346 GTAYVAGRPDHG--RLGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVALMHSSR 398
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 28/332 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS VT+ G +Y+FG N GQLGHG T+ +P ++ L+ ++ A G T+
Sbjct: 43 GDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAA 102
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+++G +Y+FG G+ +G V P+++E L A G+ F+A ++ G +
Sbjct: 103 TESGHLYSFGCGGDGQLGHGDAEDSHV--PKIIEGLDVQKYKHLACGSDFSAAITENGEL 160
Query: 273 YTFSWGNDAR----LGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
YT WG+ LG TE P + H V ++ GY Y +A+ + +
Sbjct: 161 YT--WGSCGEGQNGLGEDTEIPTRLHLHG--------KVRMVSCGY-YHMAVVTEDG--S 207
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+Y G GGKLG + +L ++ + + Q VV A GA AVV ++G V T+G
Sbjct: 208 LYMCGEKEGGKLGLDHEQLDNTSQL-QKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQ 266
Query: 388 GRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LG G+ E+ P+ + VKA V+ G+ T V+++ G++Y+FG G LG
Sbjct: 267 GNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLG 326
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+ D +N P+ V ++V
Sbjct: 327 ---LGD---ECFSNTFKPEKVKRFNNFTVKMV 352
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 50/324 (15%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF------VVQAAIGNFFTAV 265
+ ++G V+ FGK F ++L N F VV + G+ +AV
Sbjct: 8 VPESGAVFTFGKTRF------------------ADNLANKFWIRDDAVVNLSCGDEHSAV 49
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ G++YTF + +LGH + +P ++ L+ V +A G + +A SG
Sbjct: 50 VTANGKLYTFGCNDWGQLGHGNTKSYTKP-SVVKKLKPEKVYMVACGRNH--TIAATESG 106
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+YS GCG G+LGHG D P++IE + + + A G+ +A + ++G + TW
Sbjct: 107 H-LYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHL--ACGSDFSAAITENGELYTW 163
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G G G + +P + V+ V+ G Y VV+EDG +Y G E L
Sbjct: 164 GSCGEGQNGLGEDT--EIPTRLHLHGKVRM--VSCGYYHMAVVTEDGSLYMCGEKEGGKL 219
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G + H + + +K + ++VV + T +T++G +Y FG
Sbjct: 220 GLD---------HEQLDNTSQLQKIKSIEDQVVVAACGAEF-----TAVVTKNGSVYTFG 265
Query: 506 AGDKGQLGIELVNNQTERGNPERV 529
G++GQLG+ +TE PER+
Sbjct: 266 QGNQGQLGLGSSMMETEF--PERI 287
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 36/336 (10%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++ + G + +++ G++Y FG + +G+ +G TK T P +V+ LK V A
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHG--NTKSYTKPSVVKKLKPEKVYMVAC 94
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G T + G +Y+F G D +LGH D E + +E + V + C
Sbjct: 95 GRNHTIAATESGHLYSFGCGGDGQLGH----GDAEDSHVPKIIEGLDVQKYKHLACGSDF 150
Query: 319 LACQPSGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A +Y+ G CG G +G D + P + L+ + +V+ G +H AVV
Sbjct: 151 SAAITENGELYTWGSCGEGQ---NGLGEDTEIPTRLH----LHGKVRMVSCGYYHMAVVT 203
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+DG + G G LG +E+ ++ ++ ++++ D + + A G T VV+++G VY
Sbjct: 204 EDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVY 262
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
+FG G LG G+ P+ + ++V R V + T +
Sbjct: 263 TFGQGNQGQLG-------LGSSMMETEFPERIPLFEKVKARTVSCG-------ESFTAVI 308
Query: 496 TESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 529
T+ G LY FG G G+LG+ E +N + PE+V
Sbjct: 309 TKHGNLYTFGDGRHGKLGLGDECFSNTFK---PEKV 341
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 20/275 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+IA T G +YSFG GQLGHG E+ P+ I L + A G+ + I
Sbjct: 95 GRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAI 154
Query: 213 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G++Y +G S GE + G+ + T++ T L ++ + + G + AV++ +G
Sbjct: 155 TENGELYTWG--SCGEGQNGLGEDTEIPTRLHLHGKVRMV-----SCGYYHMAVVTEDGS 207
Query: 272 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y +LG H + ++ + ++E+ Q+ C A +VY+
Sbjct: 208 LYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED----QVVVAACGAEFTAVVTKNGSVYT 263
Query: 331 VGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G G+LG GS E + P I F+ ++ V+ G AV+ + G + T+G GR
Sbjct: 264 FGQGNQGQLGLGSSMMETEFPERIPLFE--KVKARTVSCGESFTAVITKHGNLYTFGDGR 321
Query: 390 YGCLGHGNEECES---VPKVVQALNDVKAIHVATG 421
+G LG G +EC S P+ V+ N+ V G
Sbjct: 322 HGKLGLG-DECFSNTFKPEKVKRFNNFTVKMVTCG 355
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGR 208
A G + VT G VY+FG + GQLG G++ E P I + ++ + G
Sbjct: 245 AACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESF 304
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
T +I+ G +Y FG G+ G + P+ V+ N V G
Sbjct: 305 TAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 138/311 (44%), Gaps = 34/311 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ I G ++ +T G V FG N+ GQLG G T P P+ +L II G
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDH 204
Query: 209 TMLISDAGQVYAFGKDSFGE-AEYGVQGTKL---------------------------VT 240
++ ++ AG V+ +G + G+ + V+ T++ T
Sbjct: 205 SIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYT 264
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND--VEPHPLL 298
P LV L+ I + G T +LS G VY+F LG +E +P +
Sbjct: 265 LPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIK 324
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQ 357
T N + Q+++G + L L SG VYS G G G+LG G T + P L++ F
Sbjct: 325 FTETNEKIKQLSSGASHTLFLT---SGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFN 381
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
++ V VAAG H+ + GRV TWG G G LGHGNE E++PK + + I
Sbjct: 382 QNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVID 441
Query: 418 VATGDYTTFVV 428
+ G + V+
Sbjct: 442 IFAGIDNSLVL 452
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 157/368 (42%), Gaps = 65/368 (17%)
Query: 123 QKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT 182
++ G SW + FLL E + EN I+ VY +G+N SG +
Sbjct: 84 KQFGSSW--LNSFLLTDE---QNENDPTISNK-----------VYMWGTNKSGNMS--LP 125
Query: 183 EEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 241
E++R P I L+ + + G T++++ G+V FG+++FG+ G+ T+ T+
Sbjct: 126 SEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQ--LGLGDTRNRTA 183
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND------------ARLGHHTEP 289
P VE+L N ++ +G + +++ G V F WG + R+ TE
Sbjct: 184 PTPVETLNNQHIIDIGVGLDHSIAVTKAGHV--FGWGYNVEGQIGQKVVEYTRMNSTTEV 241
Query: 290 NDVEPH-------------------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
D E L+ LE I + + GY L+ + + VYS
Sbjct: 242 MDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGN---VYS 298
Query: 331 VGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
G G LG GS + P I +F N + +++GA H + G V + GWG
Sbjct: 299 FGSNEIGTLGLGSELKGRVTKPTKI-KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWG 357
Query: 389 RYGCLGHG----NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G LG G N + ++ K N +K + VA G + + + G VY++G G +
Sbjct: 358 TEGRLGLGMDTSNRDSPTLLKYFNQ-NKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGK 416
Query: 445 LGHNAIAD 452
LGH +D
Sbjct: 417 LGHGNESD 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 161/368 (43%), Gaps = 63/368 (17%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGRTMLISD------ 214
S+ ++SFGS + +LG ++ P I L ++I Q + + L++D
Sbjct: 45 SRQKLFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTDEQNEND 104
Query: 215 ---AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ +VY +G + G + + P ++ LKN FV + G FT VL+R+G+
Sbjct: 105 PTISNKVYMWGTNKSGNMSLPSEQYRF---PTTIDLLKNTFVEKVIGGRSFTLVLTRDGK 161
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V F N +LG N P P + TL N ++ I G + ++A +G V+
Sbjct: 162 VLGFGENNFGQLGLGDTRNRTAPTP-VETLNNQHIIDIGVGLDH--SIAVTKAG-HVFGW 217
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G + G++G +++E ++ + V+ DG G
Sbjct: 218 GYNVEGQIGQ---------KVVEYTRMNSTTEVM-------------DGE-------EEG 248
Query: 392 CLGHGNEEC-----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G E+ ++P +V L +K +V G +TF++S G+VYSFG E +LG
Sbjct: 249 GAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLG 308
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ G+ V P + + NE++ Q+S S HT LT G +Y+ G
Sbjct: 309 LGSELKGR------VTKPTKI-KFTETNEKIKQLSSGAS-----HTLFLTSGGNVYSCGW 356
Query: 507 GDKGQLGI 514
G +G+LG+
Sbjct: 357 GTEGRLGL 364
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 153/327 (46%), Gaps = 38/327 (11%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q A G+ L + G+V+ +G++ G +G + P+LVESL V A G
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVESLAVSNVEYIACGE 286
Query: 261 FFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
F T V++ G +Y WG N LGH T + P + G LE + V+ +A G +
Sbjct: 287 FHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 344
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
A S +++ G G G LGHG R +P+ +E L + + VA G WH+A +
Sbjct: 345 ---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRAMKVACGVWHSAAI 399
Query: 377 ----GQ------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
GQ ++ TWG G LGHG++E + VP VQAL D VA G T
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTV 459
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
++ G V++ G + LG N ADG+ P +V K NE V +IS ++
Sbjct: 460 ALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLGNELVEEISCGSN- 508
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLG 513
H ALT ++Y +G G G+LG
Sbjct: 509 ----HVAALTSRSEVYTWGMGANGRLG 531
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 151/296 (51%), Gaps = 23/296 (7%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ VT+ G +Y +G S +G LGHGT W P+ + L+G++++
Sbjct: 278 NVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSV 337
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G+ + L +G+++ FG +FG +G + + V P+ VE+L ++ A G +
Sbjct: 338 ACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRAMKVACGVWH 395
Query: 263 TAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+A + + +++T+ G+ RLGH + + P + L + Q+A G
Sbjct: 396 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVDHNFHQVACG 454
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ +ALA SG V+++G G+LG+ + D K P ++ Q +L N ++ G+ H
Sbjct: 455 HSMTVALA--TSGH-VFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELVEEISCGSNH 509
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
A + V TWG G G LGHG+ E + P +V AL D ++ G ++TT +
Sbjct: 510 VAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 565
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 141/285 (49%), Gaps = 38/285 (13%)
Query: 245 VESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGT 300
+ESL +++V Q A G+ + +R+G V+T WG + RLGH T+ + P L+ +
Sbjct: 217 IESLGDVYVWGEQIACGSRHIGLTTRQGEVFT--WGEELGGRLGHGTDTDICRP-KLVES 273
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQL 358
L V IA G + + +Y G G G LGHG+ P+ + L
Sbjct: 274 LAVSNVEYIACGEFHTCVVTASGD---LYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PL 329
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
LQ + VA G+WH+A+ G++ T+G G +G LGHG+ E + PK V+AL+ +A+ V
Sbjct: 330 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 389
Query: 419 ATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
A G + + + E ++++G G+ LGH G++ A L P V
Sbjct: 390 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQ 441
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+L V+ Q++ +S+ T AL SG ++ G+ + GQLG
Sbjct: 442 AL--VDHNFHQVACGHSM-----TVALATSGHVFTMGSSNNGQLG 479
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG VY++G ++ GQLG TEE R PR I+SL I+I+Q + G ++
Sbjct: 41 GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLA 100
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S +V+++G++ +G+ G + K TSPQL++SL I +Q A G + VL+ G
Sbjct: 101 LSKGSEVFSWGQNKYGQLGLGFEFKK-QTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGA 159
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG + E + P+ LL +L + +V I G + AL + V+
Sbjct: 160 I--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVF 213
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGH S + E +PR + F+L+ VA G H +A V GR+ ++G G
Sbjct: 214 TFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 271
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 272 GNGQLGTGSTSNRKSPFTVK 291
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+S+G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 90 QVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGA 149
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 207
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V Q+A G + A PS
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFV--PSSGR 264
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 265 IYSFGLGGNGQLGTGSTSNRKSP 287
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 191 IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLK 249
+ +L I+ + G T+ ++D GQVYA+G D+ G+ G+ GT+ + P+ ++SL
Sbjct: 27 VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQL--GLPGTEECIRVPRNIKSLS 84
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVV 307
+I +VQ + G + + LS+ V FSWG + +LG E L+ +L IP +
Sbjct: 85 DIQIVQVSCGYYHSLALSKGSEV--FSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFM 142
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
QIAAG + L SG A++ G G+LG D P L++ L + + V +
Sbjct: 143 QIAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 197
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 426
G H A + ++G V T+G G YG LGH + E P+ V L VA G +T+
Sbjct: 198 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 257
Query: 427 VVSEDGDVYSFGCGESASLG 446
V G +YSFG G + LG
Sbjct: 258 FVPSSGRIYSFGLGGNGQLG 277
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 26/279 (9%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+V + G+ T L+ +G+VY + D +LG + + +L +I +VQ++ G
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAW 371
Y + LAL+ G V+S G G+LG G ++ P+LI+ LL + + +AAG
Sbjct: 95 YYHSLALS---KGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS--LLGIPFMQIAAGGA 149
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H+ V+ G + WG ++G LG +E VP ++++L K +++ G+ T ++++
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 209
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G V++FG G LGHN+ + R L +VT + + H
Sbjct: 210 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------H 254
Query: 492 TFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 525
T A SG++Y+FG G GQLG +N+ T +GN
Sbjct: 255 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 293
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 203 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 260
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 261 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 293
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 154/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + + A G L++ G+V+ +G++S G +GV K V P+LVES
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVES 328
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LGH + + P + G LE +
Sbjct: 329 LAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL- 387
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q+A+ C A S +++ G G G LGHG R + +PR +E L L+ +
Sbjct: 388 --QVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVE--SLSGLRTIA 443
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
A G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 444 AACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 503
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V++ G LG N ADG+ P LV K
Sbjct: 504 FHKIACGHSLTVGLTTSGHVFAMGSTVYGQLG-NPYADGK--------LPCLVED-KLSG 553
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +I+ Y H LT ++Y +G G G+LG
Sbjct: 554 ESVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 587
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 23/290 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHG W P+ I L+G+++ G T
Sbjct: 340 GEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHT 399
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ GQ++ FG +FG +G + V P+ VESL + + AA G + TA +
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGDREN--VAYPREVESLSGLRTIAAACGVWHTAAVVEV 457
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 458 IVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSLTVG 516
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V+++G + G+LG+ D K P L+E +L +A GA+H AV+
Sbjct: 517 LTT--SGH-VFAMGSTVYGQLGN-PYADGKLPCLVED-KLSGESVEEIACGAYHVAVLTS 571
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E P +V+AL D ++A G +YT +
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTAAI 621
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 37/378 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 198
E C ENS T+K V V+ +G N QLG + P L ++
Sbjct: 545 ELCTLWENS------------TNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQ 592
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
A G+ T I++ G++Y+ G+ SFG+ G T VTSP+LV L + V + ++
Sbjct: 593 CKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIG-DITGNVTSPRLVTGLNQLIVTKVSV 651
Query: 259 ---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
GN A L+ +G +++ G + +LGH + +PH + + I V I+ G +
Sbjct: 652 HSGGNHVMA-LTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKI-VTDISCGSAH 709
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
A+ +Y+ G G G+LGHG P+ + F N+ V +
Sbjct: 710 SAAIV---ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVC 766
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ D +V +WG G +G LG G E +P V+ L ++ + G T +++ G V+
Sbjct: 767 ITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVW 826
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G+ LGH +V P+LV L+ + V+ I++ H A+
Sbjct: 827 TWGKGDFYRLGHGT--------DIHVRQPKLVEGLR--GKHVIDIAVG-----ALHCLAV 871
Query: 496 TESGKLYAFGAGDKGQLG 513
T+ G+++++G D GQLG
Sbjct: 872 TQDGEVFSWGDNDHGQLG 889
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 23/305 (7%)
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSR 268
+ +D V+A G + G+ G T VTSP+L+ES+K+I + + ++ G LS
Sbjct: 1489 ITTDGALVFATGYGNNGQLGLGYSET--VTSPRLLESIKHINIKKISVHSGGRHCLALSS 1546
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V+++ G D +LGH +P + I + I AG + A+ +
Sbjct: 1547 DGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKI-ITNICAGGSHSAAIGLNGE---L 1602
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G G+LGHG D+ P+ +E Q + V +G + D V +WG G
Sbjct: 1603 YTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDG 1662
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LG G + VP +++ L+ + V G + +++ G +Y++G G+ LGH
Sbjct: 1663 DYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHG 1722
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+V P +VT+L N+ V IS + H T+ G++Y +G D
Sbjct: 1723 T--------EEHVRRPMMVTAL--FNKIVTSISCG-----SLHCVVCTDEGEVYCWGDND 1767
Query: 509 KGQLG 513
+GQLG
Sbjct: 1768 EGQLG 1772
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 24/345 (6%)
Query: 157 SIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI--IQAAAGAGRTMLIS 213
++ +T+ G +V++ G ++GQLG G +E PR + S++ I I I +G + +S
Sbjct: 1486 TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALS 1545
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G+V+++G+ G+ +G + T + P+ +E + G +A + G +Y
Sbjct: 1546 SDGEVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELY 1603
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
T+ G RLGH + ++P + L+ V+ +A G L C + V+S G
Sbjct: 1604 TWGKGRYGRLGHGDSDDQLKPKQ-VEALQFFFVLDVACGSGDAQTL-CITNDDNVWSWGD 1661
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G GKLG G K P +IE + V V G+ + + + G + TWG G Y L
Sbjct: 1662 GDYGKLGRGGSDGCKVPMIIEDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRL 1719
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GHG EE P +V AL + ++ G V +++G+VY +G + LG I
Sbjct: 1720 GHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIAR 1779
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
Q TP L T L +N+++ +IS +AHT A + S
Sbjct: 1780 Q--------TPTLNTFL--LNKKIDRISCG-----SAHTIAWSTS 1809
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 17/343 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAA--AGAGRT 209
G + +T+KG +YS G +S G+LG G T PR + L + + + + +G
Sbjct: 599 GSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHV 658
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
M ++ G +++G G+ +G + P L+E+ V + G+ +A +
Sbjct: 659 MALTSDGLAFSWGDGENGQLGHG--NLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVEN 716
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+YT+ G+ RLGH E ++P + L VVQ++ G C V+
Sbjct: 717 KYLYTWGLGDFGRLGHGDEETILQPKFVTHFL-GYNVVQVSCG-SRDAQTVCITDDDKVW 774
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S G G GKLG G P +EQ + LQ + GA + + G V TWG G
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGKGD 832
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+ LGHG + PK+V+ L I +A G V++DG+V+S+G + LG
Sbjct: 833 FYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG--- 889
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
G+ + P L+T L + V ++SI W T
Sbjct: 890 --TGETDVKK---VPNLITGLHNHRIKYVACGSSHSIAWTEIT 927
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A+TS G+ +S+G +GQLGHG +P I + G + + G+ +
Sbjct: 653 SGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAA 712
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I + +Y +G FG +G + T + P+ V VVQ + G + T ++ +
Sbjct: 713 IVENKYLYTWGLGDFGRLGHGDEET--ILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDD 770
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+V+++ G+ +LG + P + L + + +I G + +AL +G V+
Sbjct: 771 DKVWSWGDGDFGKLGRGGSERCLIPVE-VEQLRGLQICKILCGAQFTVALT--KTG-TVW 826
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P+L+E + + +A GA H V QDG V +WG
Sbjct: 827 TWGKGDFYRLGHGTDIHVRQPKLVEGLR--GKHVIDIAVGALHCLAVTQDGEVFSWGDND 884
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G LG G + + VP ++ L++ + +VA G
Sbjct: 885 HGQLGTGETDVKKVPNLITGLHNHRIKYVACG 916
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 119/236 (50%), Gaps = 10/236 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
E C + + AG HS A+ G +Y++G G+LGHG ++++ +P+ + +LQ +
Sbjct: 1576 EFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFV 1635
Query: 200 IQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ A G+G +T+ I++ V+++G +G+ G G+ P ++E L +V+
Sbjct: 1636 LDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRG--GSDGCKVPMIIEDLSGKGIVKVE 1693
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+ F+ L++ G +YT+ G+ RLGH TE + P ++ L N V I+ G L
Sbjct: 1694 CGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPM-MVTALFNKIVTSISCG--SLH 1750
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ C G VY G G+LG G+ + P L LLN + ++ G+ H
Sbjct: 1751 CVVCTDEG-EVYCWGDNDEGQLGDGTIIARQTPTL--NTFLLNKKIDRISCGSAHT 1803
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 10/280 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A++S G V+S+G G+LGHG + +P+ I G I AG +
Sbjct: 1536 SGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAA 1595
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I G++Y +GK +G +G +L P+ VE+L+ FV+ A G+ T ++ +
Sbjct: 1596 IGLNGELYTWGKGRYGRLGHGDSDDQL--KPKQVEALQFFFVLDVACGSGDAQTLCITND 1653
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+++ G+ +LG P ++ L +V++ G + +AL +Y
Sbjct: 1654 DNVWSWGDGDYGKLGRGGSDGCKVPM-IIEDLSGKGIVKVECGSQFSMALT---KYGVLY 1709
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G +LGHG+ + P ++ L N ++ G+ H V +G V WG
Sbjct: 1710 TWGKGDYYRLGHGTEEHVRRPMMVT--ALFNKIVTSISCGSLHCVVCTDEGEVYCWGDND 1767
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P + L + K ++ G T S
Sbjct: 1768 EGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWS 1807
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ + G ++A+T G V+++G +LGHGT +P+ + L+G +I A GA
Sbjct: 808 KILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALH 867
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++ G+V+++G + G+ G K V P L+ L N + A G+
Sbjct: 868 CLAVTQDGEVFSWGDNDHGQLGTGETDVKKV--PNLITGLHNHRIKYVACGS 917
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 30/360 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G +S A+T+ G + +G GQLG G E+ PR SL+ +IQ A
Sbjct: 45 SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDR 102
Query: 208 RTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
T I G++Y + GK G+ E + +V+ P V++L+ V+Q + G++
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKVIQVSCGSYH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ + + T+ G RLG H + D+ L+ +L +P+ +I+ G + L
Sbjct: 162 TGCLTDDKKALTWGLGLQGRLG-HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+Y G G GKLG GS D PRL+E L ++Q V+ G+ H+A V + G+V
Sbjct: 221 GK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276
Query: 383 CTWGW-GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
TWG GR G + +G E PK + L + ++ G+ + +S+ GD+Y++G
Sbjct: 277 YTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM-- 334
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ ++GH G H N+ + + N+ +VQ+ ++S H+ AL++ G L
Sbjct: 335 TKNIGH-----GIQGIHPNMPSKHPILQ----NKNIVQVVCSSS-----HSIALSDIGAL 380
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 178/354 (50%), Gaps = 36/354 (10%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTMLISDAGQ 217
SK V +GS GQ HG+ EE P P + G+R I + + G+ + I+++G
Sbjct: 6 SKSGVVVWGSTEYGQ--HGSKGEEVSPGP-HLVDGLRHLSSISKVSCGSNYSAAITNSGD 62
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+ +G G+ +G LV P++ SLKN V+Q A + TA + G +YT+
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLV--PRVNLSLKN--VIQVACSDRHTAAILSNGELYTWGC 118
Query: 278 GNDARLGHH----TEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ +LGH + N+V P+ + LE V+Q++ G + C + G
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT---GCLTDDKKALTWG 175
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
GL G+LGHG D P+LIE L ++ + + G H A++ G++ +G G +G
Sbjct: 176 LGLQGRLGHGDTQDIFTPKLIESLAGLPIKEI--SCGGHHTAILLVTGKLYMFGGGAFGK 233
Query: 393 LGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + +P++++ L D++ V+ G + V++ G VY++G G LGH I
Sbjct: 234 LGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGH--IF 289
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+G + L+P+ +++L++ +V IS NS H+ AL++ G +Y +G
Sbjct: 290 NGP---EHDFLSPKRLSNLEKA--FIVDISCGNS-----HSVALSDVGDIYTWG 333
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 30/296 (10%)
Query: 226 FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 281
+G EYG G+K + P LV+ L+++ + + + G+ ++A ++ G + + +G
Sbjct: 13 WGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG + + P L +L+N V+Q+A C A S +Y+ GC GKLGH
Sbjct: 73 QLGFGNLEDCLVPRVNL-SLKN--VIQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126
Query: 342 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G ++ Q + L + V+ V+ G++H + D + TWG G G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ PK++++L + ++ G + T ++ G +Y FG G LG + D
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDD----- 241
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VL P+L+ + I +T + H+ A+T+ GK+Y +G G G+LG
Sbjct: 242 ---VLIPRLLEG------PLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLG 286
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 440
V WG YG G EE P +V L + +I V+ G + ++ GD+ +G G
Sbjct: 10 VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG + D L P++ SLK V+Q++ ++ HT A+ +G+
Sbjct: 70 GCGQLGFGNLED--------CLVPRVNLSLKN----VIQVACSDR-----HTAAILSNGE 112
Query: 501 LYAFGAGDKGQLG 513
LY +G G+LG
Sbjct: 113 LYTWGCSKNGKLG 125
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2543
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 2544 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2601
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 2658
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ I+ + ++ VA G + + +DG V T+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 2716
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L + VA G T ++ +GDVY++G L
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 2776
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 2777 GLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 2813
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 2582 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2641
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 2642 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 2699
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 2700 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GMIIEDVAV 2751
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 2752 GAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAGRC 2806
Query: 372 HAA 374
H+A
Sbjct: 2807 HSA 2809
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 2502 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2561
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 2562 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2619
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 2620 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 2666
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P+++D+
Sbjct: 2667 GDYGKLGL---GNSTAKSSPQKIDV 2688
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2541
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 2542 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2599
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 2600 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 2655
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 2656 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 2715
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L + V + HT AL
Sbjct: 2716 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 2760
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 2761 SNGDVYAWGSNSEGQLGLGHTNHVRE 2786
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 17/352 (4%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+Y++G + GQ G G + P P+++LQG ++ AA G+ + ++ G++Y G +
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
+ GV+G ++ P V +L+ V A G + G + + +LG
Sbjct: 99 --ARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGT 156
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
+L + ++AAG + LAL S VYS G G G LGHG
Sbjct: 157 GEVGASAAQPRVLKRIRGAHFARVAAGATHSLALT---SSGQVYSFGEGSFGALGHGDVN 213
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P L++ + V +AAG + +A V GRV TWG +YG LG+G +P+
Sbjct: 214 NRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQ 271
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V + +A+ VA GD+ ++ G+VY++G S LG + G + + +P
Sbjct: 272 PVPGIE--QAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNL-GSEALNGCLCSPS 328
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
V SL ++ + Q+S H+F ++ +L+ GA D+GQL ++ V
Sbjct: 329 RVDSL--ADQSIRQVSAGAR-----HSFFVSPGEQLWGAGANDEGQLALQSV 373
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 136/309 (44%), Gaps = 16/309 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
A G +S VT G +Y+ GSN + QLG E P + +L+ + A G G
Sbjct: 74 HAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGH 133
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ + D G + A+G + +G+ G G P++++ ++ + A G + L+
Sbjct: 134 MLAVVDNGHLAAWGSNEYGQLGTGEVGAS-AAQPRVLKRIRGAHFARVAAGATHSLALTS 192
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G+VY+F G+ LGH N +P L+ L +V IAAG + A++ SG V
Sbjct: 193 SGQVYSFGEGSFGALGHGDVNNRAKP-TLVQALWPEAIVSIAAGEYFSAAVSL--SGR-V 248
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
++ G G+LG+G + P+ + + Q V VA G H + + G V TWG
Sbjct: 249 FTWGRNKYGQLGNGEFGNAFLPQPVPGIE----QAVQVACGDHHCIALTRWGEVYTWGLH 304
Query: 389 RYGCLGHGN-------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
G LG G+ C P V +L D V+ G +F VS ++ G +
Sbjct: 305 SSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGAND 364
Query: 442 SASLGHNAI 450
L ++
Sbjct: 365 EGQLALQSV 373
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ AG HS+A+TS G VYSFG S G LGHG +P +++L I+ AAG
Sbjct: 178 ARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEY 237
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G+V+ +G++ +G+ G G + PQ V ++ VQ A G+ L+
Sbjct: 238 FSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFL--PQPVPGIEQ--AVQVACGDHHCIALT 293
Query: 268 REGRVYTFSWGNDARLGH 285
R G VYT+ + +LG
Sbjct: 294 RWGEVYTWGLHSSGQLGQ 311
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 38/177 (21%)
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG G G G ++ + P+ VQAL +H A G Y + V+ DG++Y+ G ++
Sbjct: 41 TWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDAR 100
Query: 444 SLGH--------------------NAIADGQG----------------NRHANVLTPQLV 467
LG + +A GQG N + + T ++
Sbjct: 101 QLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160
Query: 468 TSLKQ--VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
S Q V +R+ H+ ALT SG++Y+FG G G LG VNN+ +
Sbjct: 161 ASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAK 217
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-------WRPRPIRSLQGIRIIQ 201
Q G H IA+T G VY++G +SSGQLG G+ P + SL I Q
Sbjct: 281 QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQ 340
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGN 260
+AGA + +S Q++ G + E + +Q V P V L + A G+
Sbjct: 341 VSAGARHSFFVSPGEQLWGAGAND--EGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGD 398
Query: 261 FFTAVL 266
AVL
Sbjct: 399 HSIAVL 404
>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
Length = 1060
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 170/372 (45%), Gaps = 27/372 (7%)
Query: 165 VVYSFGSNSSGQLGHGTTEEE---WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
+VY+ G N++GQLG G E WR R R +G R+ A G+ ++++ AGQV +
Sbjct: 33 LVYACGYNATGQLGCGDRESRVVPWRVRTSRLGKG-RVDGVACGSSYSVVVV-AGQVASC 90
Query: 222 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
GK+ G+ +G G T+P++VE L+ + VV A T L GRVY++ G++
Sbjct: 91 GKNVHGQLGHG--GRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEG 148
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + PHP VV + AG + LAL AVYS GCG G LGH
Sbjct: 149 QLGHGA--FEAVPHPRRIARLPTSVVAVGAGRTHSLALDAD---GAVYSWGCGDDGALGH 203
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G R + PR +E F+ V+ G+ H AVV DG + TWGW YG G
Sbjct: 204 GDRRRQLAPRAVEFFK--TRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDG 261
Query: 402 SVPKVVQALND--VKAIHVATGDYTTFVVSE--DGD-VYSFGCGESASLGHNAIADGQGN 456
P V D + + A G T + GD +++FG G + +
Sbjct: 262 LRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAYGQCGGSTCSAAAPR 321
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQLGIE 515
R + + S + + VV+ +L+ + L G YA+G GD GQLG
Sbjct: 322 RVGG----KFLGSQEGGDGAVVE-ALSAGGRHSVCCVRLPGGGTATYAWGRGDDGQLGSG 376
Query: 516 LVNNQTERGNPE 527
+ + R NP
Sbjct: 377 --DRRDRRANPR 386
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G +S+ V + G V S G N GQLGHG +EE PR + L+G+R++ AA T+ +
Sbjct: 75 GSSYSVVVVA-GQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLAL 133
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
D G+VY++G+ G+ +G + V P+ + L VV G + L +G V
Sbjct: 134 DDRGRVYSWGRGDEGQLGHGA--FEAVPHPRRIARLPTS-VVAVGAGRTHSLALDADGAV 190
Query: 273 YTFSWGNDARLGHHTEPNDVEPH 295
Y++ G+D LGH + P
Sbjct: 191 YSWGCGDDGALGHGDRRRQLAPR 213
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 13/221 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G VYS+G G LGHG + PR + + + G+ +
Sbjct: 176 AGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAV 235
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G + +G ++G+ G L + + V AA G T +R
Sbjct: 236 VTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHAS 295
Query: 272 ---VYTFSWGNDARLGHHT----EPNDVEPHPLLGTLE---NIPVVQIAAGYCYLLALAC 321
++ F W + G T P V LG+ E V ++AG + +
Sbjct: 296 GDAIWAFGWNAYGQCGGSTCSAAAPRRVGGK-FLGSQEGGDGAVVEALSAGGRHSVCCVR 354
Query: 322 QP-SGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLN 360
P G A Y+ G G G+LG G R D + +PR+ +N
Sbjct: 355 LPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVN 395
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 28/309 (9%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P P+ +L G +I+QAA G
Sbjct: 47 VAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHC 106
Query: 210 MLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFT 263
+ + D G+ YA+G + +G E E GT+ + P + V Q A G +
Sbjct: 107 LAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHS 166
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLAL 319
VL++EG V+T+ G P D++ P + G LE + V IA G + LAL
Sbjct: 167 VVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRV--IAVGAFHNLAL 215
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ +++ G G+LG G P +E L+L V +AAG WH+ + D
Sbjct: 216 T---EDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTALTID 270
Query: 380 GRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V WG G +G LG G+++ VP V+ L + V+ G + ++ DG ++S+G
Sbjct: 271 GEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYG 330
Query: 439 CGESASLGH 447
G+ LG+
Sbjct: 331 RGDHGRLGY 339
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 179/376 (47%), Gaps = 38/376 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG G EE+ P + +L + AG+ ++ I D G+++ +G +
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWNQ 69
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK +SP V++L +VQAAIG + + +GR Y +WG + G
Sbjct: 70 RGTLGHPPE-TKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAY--AWGGN-EYGQ 125
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
E + + +IP+ Q C L Q + +SV + + GH
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQ----RCALKLKVRQVAAGGTHSV---VLTQEGHVWTW 178
Query: 346 DEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWG--RYGCLGHGN 397
+ P ++ ++ L+ V V+A GA+H + +D V W WG YG LG G+
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTED--VILWAWGNNEYGQLGTGD 236
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ S P V+ L+D+ + +A G + + ++ DG+VY++G GE LG G+
Sbjct: 237 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGF-------GDD 289
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
++ + P V L E +VQ+S + H+ AL G+++++G GD G+LG
Sbjct: 290 KSSHMVPLKVELL--AGEDIVQVSCGGT-----HSVALARDGRMFSYGRGDHGRLGY--- 339
Query: 518 NNQTERGNPERVDIDL 533
+ G+P + I+L
Sbjct: 340 GRKVTTGHPMELPINL 355
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 29/262 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--------PIRSLQGIRII 200
QA G H +AV KG Y++G N GQ G +E R P R +++
Sbjct: 98 QAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR 157
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
Q AAG +++++ G V+ +G+ + K +++P V+ L+ + V+ A+G
Sbjct: 158 QVAAGGTHSVVLTQEGHVWTWGQ------PWPPGDIKQISTPVRVQGLEKVRVI--AVGA 209
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
F L+ + V ++WGN+ +LG +P + G L ++ +V IAAG + A
Sbjct: 210 FHNLALTED--VILWAWGNNEYGQLGTGDTQPRSQPIRVEG-LSDLSLVDIAAGGWHSTA 266
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV-VAAGAWHAAVV 376
L VY+ G G G+LG G D+K ++ + +LL + +V V+ G H+ +
Sbjct: 267 LTIDGE---VYAWGRGEHGRLGFG---DDKSSHMVPLKVELLAGEDIVQVSCGGTHSVAL 320
Query: 377 GQDGRVCTWGWGRYGCLGHGNE 398
+DGR+ ++G G +G LG+G +
Sbjct: 321 ARDGRMFSYGRGDHGRLGYGRK 342
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 98/244 (40%), Gaps = 45/244 (18%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
AV + G G G+LG G ++ P +E + VV AG+ ++ + DGR+ TWG
Sbjct: 9 AVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVV--AGSRNSLAICDDGRLFTWG 66
Query: 387 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
W + G LGH E + ES P V AL K + A G + V + G Y++G E
Sbjct: 67 WNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 126
Query: 446 GHNAIADGQGNR--------------------------HANVLT----------PQLVTS 469
G G R H+ VLT P
Sbjct: 127 GEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGD 186
Query: 470 LKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
+KQ++ RV + I A H ALTE L+A+G + GQLG + R P
Sbjct: 187 IKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLG---TGDTQPRSQP 243
Query: 527 ERVD 530
RV+
Sbjct: 244 IRVE 247
>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
Length = 426
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 36/295 (12%)
Query: 168 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
+ G N GQLGHG T+ P+ I L I+ AA G T+ ++D G++ G
Sbjct: 31 NLGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGRNEKG 84
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+ +G TK V +P+L+E L N +V AA G T L+ G V+ F +LG
Sbjct: 85 QLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN 142
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD- 346
+ D P P P+ ++A G + + + C+ + +YS GC G+LGH S
Sbjct: 143 Q-TDAIPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKF 198
Query: 347 -----------EKHPRLIEQF-------QLLNLQPVV---VAAGAWHAAVVGQDGRVCTW 385
E PR + F Q+L + VV VA G H V+ RV +W
Sbjct: 199 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSW 258
Query: 386 GWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+G YG LGH ++ E VP++V+ + A H+ G +F VSE G ++ +G
Sbjct: 259 GFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHIYAGYTCSFAVSEIGGLFFWG 313
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 41/312 (13%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A G H++A+T G N GQLGHG T+ P+ I L I+ AA G T
Sbjct: 65 AACGRNHTLALTD------LGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHT 118
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +
Sbjct: 119 LALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDCK 176
Query: 270 GRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPV 306
G +Y+F +LGH+++ D E P + + N+ V
Sbjct: 177 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 236
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
+A G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 237 RDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHI 293
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 294 YAGYTCSFAVSEIGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SSI 346
Query: 427 VVSEDGDVYSFG 438
+V+ D S+G
Sbjct: 347 IVAADESTISWG 358
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 22/238 (9%)
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
H + VE L+ L N +V A G + LAL +G G+LGHG
Sbjct: 42 HGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALT---------DLGRNEKGQLGHGDTK 92
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+LIE L N V A G H + + G V +G + G LG GN+ +++P
Sbjct: 93 RVEAPKLIEV--LSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPS 149
Query: 406 VVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHAN 460
Q + + + I +A G + ++ G++YSFGC E LGHN+ IA Q +
Sbjct: 150 PAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDC 209
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
L P+ V + + + + N + + HT L +++++G G G+LG
Sbjct: 210 ELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 267
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 132/312 (42%), Gaps = 55/312 (17%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
G++ G+ +G TK V +P+L+E L N +V AA G T L+ GR
Sbjct: 32 LGRNEKGQLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTDLGR------NEK 83
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH + VE L+ L N +V A G + LAL S V++ G G+LG
Sbjct: 84 GQLGH-GDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGS---VFAFGENKMGQLG 139
Query: 341 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G++TD P I + N QP+ +A GA + ++ G + ++G YG LGH ++
Sbjct: 140 LGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 195
Query: 399 ------------ECESVPKVVQ------------ALNDVKAIHVATGDYTTFVVSEDGDV 434
+CE VP+ V + +V VA G T V+ V
Sbjct: 196 GKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRV 255
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+S+G G LGH D + P+LV I + +FA
Sbjct: 256 FSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAAHIYAGYTC-----SFA 302
Query: 495 LTESGKLYAFGA 506
++E G L+ +GA
Sbjct: 303 VSEIGGLFFWGA 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 23/177 (12%)
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG + P+LIE L N V A G H + GR G LGHG
Sbjct: 38 GQLGHGDTKRVEAPKLIEV--LSNEVIVSAACGRNHTLALTDLGR------NEKGQLGHG 89
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ + PK+++ L++ + A G T ++E G V++FG + L G GN
Sbjct: 90 DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQL-------GLGN 142
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ + +P + Q +T + + G LY+FG + GQLG
Sbjct: 143 QTDAIPSPAQIMYNGQ--------PITKMACGAEFSMIMDCKGNLYSFGCPEYGQLG 191
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G LGHG+ + PK+++ L++ + A G T +++ G E L
Sbjct: 33 GRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGRNEKGQL 86
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH G R V P+L+ L NE +V + + HT ALTE+G ++AFG
Sbjct: 87 GH-----GDTKR---VEAPKLIEVLS--NEVIVSAACGRN-----HTLALTETGSVFAFG 131
Query: 506 AGDKGQLGIELVNNQTE 522
GQLG+ NQT+
Sbjct: 132 ENKMGQLGL---GNQTD 145
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 288 RGAAHIYAGYTCSFAVSEIGGLFFWGATNTSR------ESTMYPKAVQDLCGWKIRSLAC 341
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 342 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 401
Query: 265 VLSRE 269
V++R+
Sbjct: 402 VIARD 406
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 17/174 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 210
G H++ + S+ V+S+G G+LGH ++E PR ++ G AG +
Sbjct: 242 GTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAHIYAGYTCSF 301
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+S+ G ++ +G + P+ V+ L + A G V + E
Sbjct: 302 AVSEIGGLFFWGATNTSRES--------TMYPKAVQDLCGWKIRSLACGKSSIIVAADES 353
Query: 271 RVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T SWG G +P + TL+ I Q+A GY + L +A
Sbjct: 354 ---TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIA 404
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 170/377 (45%), Gaps = 38/377 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG H+ ++ S G VYS+G GQLG GT R P+ + +I +G +M
Sbjct: 39 VAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNT--RTTPVMAKNLNHVIDIHSGVRSSM 96
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+ +G + G+ G+ V +P V L I + + + LS G
Sbjct: 97 ALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVPGLSGIKAISGGLA-YHGMALSENG 153
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ ++ LG+ T P + G + V IAAG Y LAL + V++
Sbjct: 154 TVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGT---VWA 207
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G+ T+ P Q+ L V+ +AAG H+ + QDG V WG
Sbjct: 208 WGVNGSGELGDGTTTERHVP-----VQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNT 262
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LG G + P V+ L + A VA G Y + V + G+V+S+G LG ++
Sbjct: 263 YGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSS 320
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+A+ L P VT ++ V E IS H+ A+ + G ++ +G
Sbjct: 321 --------NASSLIPVPVTGIEHVRE----ISAG-----GFHSVAMKKDGTVWGWGYNSG 363
Query: 510 GQLGIELVNNQTERGNP 526
GQLG NN RG P
Sbjct: 364 GQLGDGTYNN--TRGIP 378
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ AG +H A + G V +WG+G G LG G + P + + LN V IH +G ++
Sbjct: 38 LVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ +DG V+++G E+ LG I NV P V L + + + L
Sbjct: 96 MALRQDGTVWTWGANENGQLGIGTI--------TNVNAPAQVPGLSGI--KAISGGLA-- 143
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
H AL+E+G ++ +G D G+LG
Sbjct: 144 ----YHGMALSENGTVWTWGKNDNGELG 167
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++G LG+GT W P+ I L+G+++ A G T
Sbjct: 336 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHT 395
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LIS GQ++ FG +FG +G + K ++ P+ V+SL + + A G + TA +
Sbjct: 396 ALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEV 453
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 454 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSITIG 512
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V++VG + G+LG+ D K P L+E +LL VA GA+H V+
Sbjct: 513 LTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTS 567
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V++L D +A G
Sbjct: 568 KNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 610
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + A G + +++ G+V+ +G+++ G G+ K VT P+LVE+
Sbjct: 267 PKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEA 324
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ +G +YT+ G N LG+ T+ + P + G LE +
Sbjct: 325 LAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQ 384
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A G + ++ S +++ G G G LGHG + +PR ++ L L+ +
Sbjct: 385 VAYVACGPWHTALIS---STGQLFTFGDGTFGVLGHGDKKSISYPREVDS--LTGLRTIA 439
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V AL D
Sbjct: 440 VACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 499
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V++ G LG N HA+ P LV K +
Sbjct: 500 FHKIACGHSITIGLTTSGQVFTVGSSVYGQLG---------NPHADGKQPCLVED-KLLG 549
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E +++ Y H LT ++Y +G G G+LG
Sbjct: 550 ESAEEVAC--GAY---HVMVLTSKNEVYTWGKGANGRLG 583
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 40/318 (12%)
Query: 216 GQVYAFGK---DSF----GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
G ++ +G+ D+F + V V P+ +ES + A G +A+++R
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V+T+ RLG + +P L+ L V +A G + A+ +
Sbjct: 294 QGEVFTWGEETGGRLGLGMGKDVTQPR-LVEALAATTVDLVACGEFHTCAVTMDGE---L 349
Query: 329 YSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
Y+ G G+ G LG+G+ P+ I L LQ VA G WH A++ G++ T+G
Sbjct: 350 YTWGDGVHNAGLLGNGTDVSHWMPKRISGI-LEGLQVAYVACGPWHTALISSTGQLFTFG 408
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVY 435
G +G LGHG+++ S P+ V +L ++ I VA G + T V E G ++
Sbjct: 409 DGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLF 468
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G+ LGH G++ L P V +L N +I+ +SI T L
Sbjct: 469 TWGDGDKNRLGH-------GDKEPR-LKPTCVPALIDYN--FHKIACGHSI-----TIGL 513
Query: 496 TESGKLYAFGAGDKGQLG 513
T SG+++ G+ GQLG
Sbjct: 514 TTSGQVFTVGSSVYGQLG 531
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ ++S G +++FG + G LGHG + PR + SL G+R I A G T +
Sbjct: 391 GPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAV 450
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 451 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDYNFHKIACGHS 508
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ G+V+T +LG + + +P + L ++A G +++ L
Sbjct: 509 ITIGLTTSGQVFTVGSSVYGQLG-NPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLT- 566
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ ++A G+ ++A +
Sbjct: 567 --SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVK--IIACGSNYSAAI 617
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
E+++ +A G H + +TSK VY++G ++G+LGHG E+ P + SL+ + A
Sbjct: 550 ESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 609
Query: 205 GAGRTMLI 212
G+ + I
Sbjct: 610 GSNYSAAI 617
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 37/334 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS A+ G +Y +GSN +LG G ++E E PR + +L+G++I+ + G T
Sbjct: 91 GASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAA 150
Query: 212 ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVL 266
+ G++Y++G G G G K +P+L+ +L + + ++ G F T L
Sbjct: 151 VDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVAL 210
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
S++G ++ + G RLG+ P P+ VV IAAG + AL
Sbjct: 211 SKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFSFALTDNGE-- 267
Query: 327 AVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+YS G G+GG L E P L+E F L+++ + AAG HAA V DG
Sbjct: 268 -LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQI--AAGYDHAAAVTDDG 324
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
R+ WG + P + A+N+ K + VA G T +SE+G+V++FG G
Sbjct: 325 RLYMWG-----------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKG 373
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
S LGH G+R N L P + +L VN
Sbjct: 374 SSNCLGH-------GDRK-NQLQPVQIEALADVN 399
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 182/384 (47%), Gaps = 52/384 (13%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHG--------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
A +++ VY++G+ + GQLGHG EE P+ + + +G I GA +
Sbjct: 37 AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSA 96
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
I + G++Y +G + + + G + +++ T P+ VE+LK + +V + G++FTA + +G
Sbjct: 97 AIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADG 155
Query: 271 RVYTFSWGNDARLGHHTEPNDV---EPHP-LLGTL--ENIPVVQIAAGYCYLLALACQPS 324
++Y++ WG G + EP P LL TL + +P++ + G + +AL+
Sbjct: 156 KMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGE 215
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
+++ G G G+LG+G + P IE F N+ V +AAG + + +G + +
Sbjct: 216 ---IWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNV--VSIAAGRDFSFALTDNGELYS 270
Query: 385 WGWGRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
WG LG G ES+P +V+A N + +A G V++DG +Y +G
Sbjct: 271 WGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ P +T++ + ++VQ++ +T AL+E+
Sbjct: 331 S-------------------KIWIEPHEMTAVNEY--KMVQVACGRQ-----YTVALSEN 364
Query: 499 GKLYAFGAGDKGQLGIELVNNQTE 522
G+++ FG G LG NQ +
Sbjct: 365 GEVFTFGKGSSNCLGHGDRKNQLQ 388
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 149/327 (45%), Gaps = 30/327 (9%)
Query: 196 GIRIIQAAAGAGRTML---ISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVE 246
G R A + A R+ L S VY +G + G+ + G++ +P+L+E
Sbjct: 19 GCRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLE 78
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 305
+ + + G +A + +G++Y + ++LG E +++E P + L+ +
Sbjct: 79 AFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGVK 137
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLN 360
+V ++ G + A+ +YS G G G LGH DE PRL+
Sbjct: 138 IVDVSCGDYFTAAVDADGK---MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQG 194
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
+ + V G +H + +DG + WG G YG LG+G + VP+ ++ + + +A
Sbjct: 195 VPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAA 254
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQ 479
G +F ++++G++YS+G LG I G N+ + P LV + ++ V Q
Sbjct: 255 GRDFSFALTDNGELYSWGGNSQNQLG---IGGGLAMDVYNIESIPVLVEAFNGLS--VKQ 309
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGA 506
I+ H A+T+ G+LY +G+
Sbjct: 310 IAAGYD-----HAAAVTDDGRLYMWGS 331
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGIRIIQAAAG 205
AG S A+T G +YS+G NS QLG G E P + + G+ + Q AAG
Sbjct: 254 AGRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAG 313
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++D G++Y + G+K+ P + ++ +VQ A G +T
Sbjct: 314 YDHAAAVTDDGRLYMW-------------GSKIWIEPHEMTAVNEYKMVQVACGRQYTVA 360
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
LS G V+TF G+ LGH N ++P + L ++ + I+ G ++ A+A
Sbjct: 361 LSENGEVFTFGKGSSNCLGHGDRKNQLQPVQIE-ALADVNITSISCGDYHMGAIA 414
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAG 207
Q AG H+ AVT G +Y +GS W P + ++ +++Q A G
Sbjct: 309 QIAAGYDHAAAVTDDGRLYMWGSKI------------WIEPHEMTAVNEYKMVQVACGRQ 356
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ +S+ G+V+ FGK S +G + +L P +E+L ++ + + G++ ++
Sbjct: 357 YTVALSENGEVFTFGKGSSNCLGHGDRKNQL--QPVQIEALADVNITSISCGDYHMGAIA 414
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 42/379 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAGR 208
+AG H+ ++ S G VYS+G GQLG GT W R P+ + +I +G
Sbjct: 39 VAGYYHTASLVSSGEVYSWGYGDRGQLGDGT----WNTRTTPVMAKNLNHVIDIHSGVRS 94
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M + G V+ +G + G+ G+ V +P V L I + + + LS
Sbjct: 95 SMALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVPGLSGIKAISGGLA-YHGMALSE 151
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G V+T+ ++ LG+ T P + G + V IAAG Y LAL + V
Sbjct: 152 NGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD---VTAIAAGGYYSLALKSDGT---V 205
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 387
++ G G+LG G+ TD P Q+ L V+ +AAG H+ + QDG V WG
Sbjct: 206 WAWGVNGSGELGDGTTTDRHVP-----VQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGN 260
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
YG LG G + P V+ L + A VA G Y + V G+V+S+G LG
Sbjct: 261 NTYGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHSLAVDRAGNVWSWGDNSQQQLGL 318
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
N+ +A+ L P V ++ V E IS H+ A+ + G ++ +G
Sbjct: 319 NS--------NASSLIPVPVPGIEHVRE----ISAG-----GFHSVAMKKDGTVWGWGYN 361
Query: 508 DKGQLGIELVNNQTERGNP 526
GQ+G NN RG P
Sbjct: 362 SGGQIGDGTYNNT--RGIP 378
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ AG +H A + G V +WG+G G LG G + P + + LN V IH +G ++
Sbjct: 38 IVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ +DG V+++G E+ LG I NV P V L + +++
Sbjct: 96 MALRQDGTVWTWGANENGQLGIGTI--------TNVNAPAQVPGLSGIK------AISGG 141
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ + H AL+E+G ++ +G D G+LG
Sbjct: 142 LAY--HGMALSENGTVWTWGKNDNGELG 167
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 1701
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 1702 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 1759
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 1816
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 1874
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 1935 GLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 1971
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 1740 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 1799
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 1800 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 1857
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + L + + +A
Sbjct: 1858 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDVAV 1909
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 1910 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRC 1964
Query: 372 HAA 374
H+A
Sbjct: 1965 HSA 1967
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 1699
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 1700 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 1758
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+ S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 1759 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 1813
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 1814 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 1873
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 1874 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVGA-------EHTLALA 1918
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 1919 STGDVYAWGSNSEGQLGLGHTNHVRE 1944
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWG 386
V + G G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 1659 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 1718
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 1719 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL- 1777
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFG 505
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 1778 ------GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFG 1823
Query: 506 AGDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 1824 DGDYGKLGL---GNSTAKSSPQKVDV 1846
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 153/346 (44%), Gaps = 48/346 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 403
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 463
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG R PR +E + L+ V
Sbjct: 464 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 518
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 519 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 578
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLV 467
+A G T ++ G VY+ G LG N ADG +G H N
Sbjct: 579 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF------ 631
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +IS Y H LT ++Y +G G G+LG
Sbjct: 632 ---------VEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 663
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 150/359 (41%), Gaps = 39/359 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 470 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 529
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 530 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 587
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 588 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 646
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 647 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAICIHKWV 703
Query: 376 VGQDGRVCT-------WGWGRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGD 422
G D +C+ R+ C H +S+ K A N K V
Sbjct: 704 SGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKKSL-KASLAPNPNKPYRVCDSC 762
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQ 479
Y+ + D YS S G N D + +N +L + S K ++ R +
Sbjct: 763 YSKLNKGPETDRYSSAKRGSVIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSK 821
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 71/331 (21%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+ VT +G +YS+G S G+LGHG + +P+ I +L + I A G T ++ +
Sbjct: 366 HATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLS 425
Query: 216 GQVYAFGKD--------------------------------------------------S 225
G +Y +G +
Sbjct: 426 GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFT 485
Query: 226 FGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREG 270
FG+ +GV G + ++ P+ VESLK + V+AA G + TA + G
Sbjct: 486 FGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 545
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+++T+ G+ RLGH + + P + L QIA G+C +AL + VY+
Sbjct: 546 KIFTWGDGDKGRLGHGDKDTRLVPT-CVAALVEPNFCQIACGHCMTVALT---TSGHVYT 601
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
+G + G+LG+ + D P +E N ++ GA+H AV+ V TWG G
Sbjct: 602 MGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGKGAN 659
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G LGHG+ + S P +V++L D + V G
Sbjct: 660 GRLGHGDTDDRSSPTLVESLKDKQVRTVVCG 690
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G +++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 402
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L N+ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 403 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 460
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ + SVP+ V++L ++ + A
Sbjct: 461 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 520
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 521 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 572
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N QI+ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 573 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 621
Query: 528 RVDIDL 533
RV+ L
Sbjct: 622 RVEGKL 627
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 173/363 (47%), Gaps = 36/363 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGAGRTM 210
AG HS+A+ S G V+++G+NSSGQLG GTT P P++ +QG+ ++ AG+ ++
Sbjct: 3 AGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQ-VQGLSEVVAVDAGSSHSL 61
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+A+G ++ G + G + T ++P V L + V A G+ L +G
Sbjct: 62 AVRSDGTVWAWGSNASG--QLGDETTISRSTPVQVLGLSGVLFVAA--GSSHVLALRYDG 117
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + + G T N P G V+ +AAG + LA+ S ++
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALPVQAQGLSG---VMAVAAGDNHSLAVRSDGS---AWA 171
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ ++ P ++ + V VAAG+ H+ V DG V WG
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSGV----VAVAAGSAHSLAVRSDGTVWAWGANAS 227
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G VP VQ L+ V A VA G + + V DG V+ +G +S LG ++
Sbjct: 228 GQLGDGTTTDRLVPVQVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSM 285
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
+L P V L VV ++ ++ H+ A+ G ++A G+ + G
Sbjct: 286 ---------RLLVPAQVQGLSA----VVAVAAGDT-----HSLAVGSDGTVWAVGSNNNG 327
Query: 511 QLG 513
QLG
Sbjct: 328 QLG 330
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 172/366 (46%), Gaps = 46/366 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++GSN+SGQLG TT P + L G+ + AAG+ +
Sbjct: 55 AGSSHSLAVRSDGTVWAWGSNASGQLGDETTISRSTPVQVLGLSGVLFV--AAGSSHVLA 112
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G + + P + L + V A G+ + + +G
Sbjct: 113 LRYDGTVWAWGSNSSGQRGDGTTNNRAL--PVQAQGLSGVMAVAA--GDNHSLAVRSDGS 168
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ +WG++A +LG T N EP + G VV +AAG + LA+ + V+
Sbjct: 169 AW--AWGSNASGQLGEGTTSNRPEPVQVQGLSG---VVAVAAGSAHSLAVRSDGT---VW 220
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G+ TD P ++ + V VAAG H+ V DG V WGWGR
Sbjct: 221 AWGANASGQLGDGTTTDRLVPVQVQGLSGV----VAVAAGHHHSLAVRNDGTV--WGWGR 274
Query: 390 YGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
LG G+ VP VQ L+ V A VA GD + V DG V++ G + LG
Sbjct: 275 NDSNQLGKGSMRLL-VPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLG- 330
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
DG L P V S VV ++ + H+ A+ G ++A+G
Sbjct: 331 ----DGTTTYR---LVPVPVLS------GVVSVAAND-----YHSLAVRSDGTVWAWGYN 372
Query: 508 DKGQLG 513
GQLG
Sbjct: 373 STGQLG 378
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 23/297 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++G+N+SGQLG GTT + P ++ L G+ + AAG ++
Sbjct: 205 AGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQGLSGV--VAVAAGHHHSLA 262
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G++ + +G+ + P V+ L + V A G+ + + +G
Sbjct: 263 VRNDGTVWGWGRNDSNQLG---KGSMRLLVPAQVQGLSAVVAVAA--GDTHSLAVGSDGT 317
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ N+ +LG T + P P+L VV +AA + LA+ + V++
Sbjct: 318 VWAVGSNNNGQLGDGTTTYRLVPVPVLS-----GVVSVAANDYHSLAVRSDGT---VWAW 369
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T P Q+ L VV V AG +H+ V DG WG Y
Sbjct: 370 GYNSTGQLGDGTTTTRLVP-----VQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAY 424
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G+ VP VQ L+ V A VA+G + + DG V+++G LG+
Sbjct: 425 GQLGDGSTTYLPVPVRVQQLSGVGA--VASGSSHSLALRSDGTVWTWGYNSFGQLGN 479
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 136/314 (43%), Gaps = 37/314 (11%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
AAG+ ++ + G V+A+G +S G+ G V P V+ L + V A G+
Sbjct: 2 AAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDA--GSSH 59
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
+ + +G V+ +WG++A +LG T + P +LG V+ +AAG ++LAL
Sbjct: 60 SLAVRSDGTVW--AWGSNASGQLGDETTISRSTPVQVLGLSG---VLFVAAGSSHVLALR 114
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 379
+ V++ G G+ G G+ + P Q L V+ VAAG H+ V D
Sbjct: 115 YDGT---VWAWGSNSSGQRGDGTTNNRALP-----VQAQGLSGVMAVAAGDNHSLAVRSD 166
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G WG G LG G P VQ L+ V A VA G + V DG V+++G
Sbjct: 167 GSAWAWGSNASGQLGEGTTSNRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGA 224
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
S LG D L P V L VV ++ + H+ A+ G
Sbjct: 225 NASGQLGDGTTTD--------RLVPVQVQGLSG----VVAVAAGHH-----HSLAVRNDG 267
Query: 500 KLYAFGAGDKGQLG 513
++ +G D QLG
Sbjct: 268 TVWGWGRNDSNQLG 281
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 118 RQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 177
R D Q GS +R L+ + AG HS+AV S G V++ GSN++GQL
Sbjct: 274 RNDSNQLGKGS----MRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQL 329
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G GTT P P+ S ++ AA ++ + G V+A+G +S G+ G T+
Sbjct: 330 GDGTTTYRLVPVPVLS----GVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTR 385
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE---PNDV 292
LV P V L + V A G + + + +G + WG++A +LG + P V
Sbjct: 386 LV--PVQVSGLSEVVSVVA--GGYHSLAVRSDGSAW--DWGSNAYGQLGDGSTTYLPVPV 439
Query: 293 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
L G V +A+G + LAL + V++ G G+LG+G
Sbjct: 440 RVQQLSG------VGAVASGSSHSLALRSDGT---VWTWGYNSFGQLGNG 480
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+AAG + LAL + V++ G G+LG G+ T P + Q Q L+ + V V A
Sbjct: 1 MAAGSSHSLALRSDGT---VWAWGANSSGQLGDGTTTYSPVPVPV-QVQGLS-EVVAVDA 55
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G+ H+ V DG V WG G LG S P VQ L + VA G +
Sbjct: 56 GSSHSLAVRSDGTVWAWGSNASGQLGDETTISRSTP--VQVLGLSGVLFVAAGSSHVLAL 113
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
DG V+++G S G DG N A + Q ++ + V
Sbjct: 114 RYDGTVWAWGSNSSGQRG-----DGTTNNRALPVQAQGLSGVMAVAAG------------ 156
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+ H+ A+ G +A+G+ GQLG +N+ E
Sbjct: 157 DNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPE 190
>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 972
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 132/268 (49%), Gaps = 10/268 (3%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G YSFG G+LGHG E P+ + +QG ++ Q G ++L++D G VY FG+
Sbjct: 104 GTAYSFGQGEWGKLGHGGAANEQHPKQLE-VQG-KVTQIGVGDQHSVLLTDGGHVYTFGQ 161
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 282
+G+ +G + K + P+ VE+L +IG F + SWG
Sbjct: 162 GIYGQLGHGTR--KDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGRQGPW 219
Query: 283 LGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
LGH +P+ V+ +G L+N ++Q+AAG + L L VYS+G G LG
Sbjct: 220 LGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGK---VYSMGKNKDGCLGQ 276
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G ++ + L N VAAG H+ V+ DG V T+G G G LGHG+ + +
Sbjct: 277 GKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQ 336
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVS 429
VP+ VQ + D KA +A G T V++
Sbjct: 337 DVPRTVQGVFD-KACAIAAGFEHTIVLT 363
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAG 205
+Q G HS+ +T G VY+FG GQLGHGT ++ RP+ + +L + I G
Sbjct: 138 TQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVG 197
Query: 206 AGRTMLISDAGQVYAFGKDS--FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFF 262
+T I+ G V+++G+ G A V PQ V LKN ++Q A G
Sbjct: 198 FDQTFAINADGVVHSWGRQGPWLGHAAQ----PDHVKQPQEVGLLKNKAKIMQVAAGKQH 253
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALAC 321
T +L+ +G+VY+ D LG +P+ + +L N + Q+AAG + + LA
Sbjct: 254 TLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLAS 313
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S V + G G G+LGHG ++ PR + Q + + +AAG H V+
Sbjct: 314 DGS---VLTFGSGSNGRLGHGDTKNQDVPRTV---QGVFDKACAIAAGFEHTIVL 362
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 153/361 (42%), Gaps = 46/361 (12%)
Query: 139 GEACCRRENSQAIAGPGH----------SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP 188
G C +N +++ P S+AV S+G Y +G+ S G E P
Sbjct: 19 GYECYDNKNPRSVNAPSDLISLHAGWNCSVAVNSEGTPYFWGTMPSKYDGKAKFLE---P 75
Query: 189 RPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ ++ G ++ T + G Y+FG+ +G+ +G G P+ +E
Sbjct: 76 SPLPAISIGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGHG--GAANEQHPKQLEV 133
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPV 306
V Q +G+ + +L+ G VYTF G +LGH T + P + + +
Sbjct: 134 QGK--VTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTI 191
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 365
I G+ A+ V+S G G LGH ++ D H + ++ LL + +
Sbjct: 192 TSIGVGFDQTFAINADG---VVHSWGR-QGPWLGHAAQPD--HVKQPQEVGLLKNKAKIM 245
Query: 366 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGD 422
VAAG H ++ DG+V + G + GCLG G ++ + P + +LN+ VA G+
Sbjct: 246 QVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGE 305
Query: 423 YTTFVVSEDGDVYSFGCGESASLGH-----------------NAIADGQGNRHANVLTPQ 465
+ V++ DG V +FG G + LGH A A G H VLT Q
Sbjct: 306 KHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRTVQGVFDKACAIAAGFEHTIVLTGQ 365
Query: 466 L 466
L
Sbjct: 366 L 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 149/358 (41%), Gaps = 31/358 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V SFG N +GQLG+ + + PR + + +I AG ++ ++ G Y +G
Sbjct: 7 VVSFGLNFNGQLGYECYDNK-NPRSVNAPS--DLISLHAGWNCSVAVNSEGTPYFWGTMP 63
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
++Y + L SP S+ + + T +G Y+F G +LGH
Sbjct: 64 ---SKYDGKAKFLEPSPLPAISI-GFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGH 119
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
N E HP ++ V QI G + + L G VY+ G G+ G+LGHG+R
Sbjct: 120 GGAAN--EQHPKQLEVQG-KVTQIGVGDQHSVLLT---DGGHVYTFGQGIYGQLGHGTRK 173
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG-CLGHGNE-ECESV 403
D P+ +E + G + DG V +WG R G LGH + +
Sbjct: 174 DLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWG--RQGPWLGHAAQPDHVKQ 231
Query: 404 PKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P+ V L N K + VA G T +++ DG VYS G + LG +
Sbjct: 232 PQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKE------TA 285
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
P +TSL N + Q++ H+ L G + FG+G G+LG NQ
Sbjct: 286 NPMPITSLN--NYVITQVAAGEK-----HSVVLASDGSVLTFGSGSNGRLGHGDTKNQ 336
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWG 386
V S G G+LG+ D K+PR + L + + AG W+ +V V +G WG
Sbjct: 7 VVSFGLNFNGQLGYECY-DNKNPRSVNAPSDL----ISLHAG-WNCSVAVNSEGTPYFWG 60
Query: 387 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G E +P + K H T EDG YSFG GE L
Sbjct: 61 TMPSKYDGKAKFLEPSPLPAISIGF---KLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKL 117
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH A+ Q H L +V +V QI + + H+ LT+ G +Y FG
Sbjct: 118 GHGGAANEQ---HPKQL---------EVQGKVTQIGVGDQ-----HSVLLTDGGHVYTFG 160
Query: 506 AGDKGQLGIELVNNQTERGNPERVD 530
G GQLG + + P+RV+
Sbjct: 161 QGIYGQLGH---GTRKDLDRPKRVE 182
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 166/357 (46%), Gaps = 41/357 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + S Q + + + G +++ G+V+++GK+ G + V + V P+++ES
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 251
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 303
L V A G T L+ G + F WG LG + + PH L G LE
Sbjct: 252 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 309
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ VV++A G + ++ S +++ G G G LGHG + P+ +E + L ++
Sbjct: 310 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 365
Query: 364 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
VA G WH A + + G++ TWG G LGH ++E + VP V+AL D
Sbjct: 366 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 424
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
V+ T ++ G V++ G E LG + + D + +V P LK
Sbjct: 425 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD---SSICSVEGP-----LK-- 474
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
E V +IS +S H LT +GK++ +G G +GQLG+ N +R +P V+
Sbjct: 475 TEFVREISSGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GNYVDRSSPTLVE 523
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 24/295 (8%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAA 204
+AIA G H+ A+ G ++ +G ++S G +W P + L+G+ +++ A
Sbjct: 258 KAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC 317
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T +IS +GQ++ +G +FG +G T V P+ VESLK + V A G + TA
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRVKAVACGPWHTA 375
Query: 265 VLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ G+++T+ + +LGH + + + P + L + Q++
Sbjct: 376 AIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTDSDFAQVSCAKA 434
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 373
+AL +G+ V+++G G+LG R D+ +E L + V +++G+ H
Sbjct: 435 LTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEFVREISSGSSHV 488
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
AV+ +G+V TWG G G LG GN S P +V+AL D + +A G T V
Sbjct: 489 AVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAV 543
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ ++S G ++++G + G LGHG T RP+ + SL+G+R+ A G T I
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 377
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ +G+++ +G G+ + + +KLV P V++L + Q +
Sbjct: 378 VEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV--PTCVKALTDSDFAQVSCAKAL 435
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG H +D + G L+ V +I++G ++ L
Sbjct: 436 TVALTITGVVFTIGSKEHGQLGSH-RLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMN 494
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVG 377
V++ G G G+LG G+ D P L+E + + + A H ++ G
Sbjct: 495 GK---VFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 551
Query: 378 QDGRVC-------TWGWGRYGCLGHGNEECES 402
+D VC ++ ++ C G+ C S
Sbjct: 552 KDQSVCSRCRLSFSFARKKHNCYNCGSMFCNS 583
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 38/298 (12%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V+ P+L+ S + + V + G A+++++G V FSWG + RLGH + P
Sbjct: 191 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHP-K 247
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 353
++ +L V IA G + ALA SG ++ G G LG R+ +L
Sbjct: 248 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 304
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ +++ V +A G WH A++ G++ T+G G +G LGHG+ + PK V++L +
Sbjct: 305 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 362
Query: 414 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
+ VA G + T + E G ++++G + LGH +D + L
Sbjct: 363 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH---SDKESK-----LV 414
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
P V +L + Q+S ++ T ALT +G ++ G+ + GQLG +++ +
Sbjct: 415 PTCVKAL--TDSDFAQVSCAKAL-----TVALTITGVVFTIGSKEHGQLGSHRLDDSS 465
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 166/357 (46%), Gaps = 41/357 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + S Q + + + G +++ G+V+++GK+ G + V + V P+++ES
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 316
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 303
L V A G T L+ G + F WG LG + + PH L G LE
Sbjct: 317 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 374
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ VV++A G + ++ S +++ G G G LGHG + P+ +E + L ++
Sbjct: 375 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 430
Query: 364 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
VA G WH A + + G++ TWG G LGH ++E + VP V+AL D
Sbjct: 431 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 489
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
V+ T ++ G V++ G E LG + + D + +V P LK
Sbjct: 490 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD---SSICSVEGP-----LK-- 539
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
E V +IS +S H LT +GK++ +G G +GQLG+ N +R +P V+
Sbjct: 540 TEFVREISSGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GNYVDRSSPTLVE 588
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 24/295 (8%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAA 204
+AIA G H+ A+ G ++ +G ++S G +W P + L+G+ +++ A
Sbjct: 323 KAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC 382
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T +IS +GQ++ +G +FG +G T V P+ VESLK + V A G + TA
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRVKAVACGPWHTA 440
Query: 265 VLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ G+++T+ + +LGH + + + P + L + Q++
Sbjct: 441 AIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTDSDFAQVSCAKA 499
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHA 373
+AL +G+ V+++G G+LG R D+ +E L + V +++G+ H
Sbjct: 500 LTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEFVREISSGSSHV 553
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
AV+ +G+V TWG G G LG GN S P +V+AL D + +A G T V
Sbjct: 554 AVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAV 608
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ ++S G ++++G + G LGHG T RP+ + SL+G+R+ A G T I
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 442
Query: 213 SD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ +G+++ +G G+ + + +KLV P V++L + Q +
Sbjct: 443 VEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV--PTCVKALTDSDFAQVSCAKAL 500
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG H +D + G L+ V +I++G ++ L
Sbjct: 501 TVALTITGVVFTIGSKEHGQLGSH-RLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMN 559
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVG 377
V++ G G G+LG G+ D P L+E + + + A H ++ G
Sbjct: 560 GK---VFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 616
Query: 378 QDGRVC-------TWGWGRYGCLGHGNEECES 402
+D VC ++ ++ C G+ C S
Sbjct: 617 KDQSVCSRCRLSFSFARKKHNCYNCGSMFCNS 648
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 38/298 (12%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V+ P+L+ S + + V + G A+++++G V FSWG + RLGH + P
Sbjct: 256 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 312
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 353
++ +L V IA G + ALA SG ++ G G LG R+ +L
Sbjct: 313 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 369
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
+ +++ V +A G WH A++ G++ T+G G +G LGHG+ + PK V++L +
Sbjct: 370 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 427
Query: 414 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
+ VA G + T + E G ++++G + LGH +D + L
Sbjct: 428 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH---SDKESK-----LV 479
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
P V +L + Q+S ++ T ALT +G ++ G+ + GQLG +++ +
Sbjct: 480 PTCVKAL--TDSDFAQVSCAKAL-----TVALTITGVVFTIGSKEHGQLGSHRLDDSS 530
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PRP+ S + ++Q A G L++ G+++ +G++S G +GV K V P+LVE+
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGV--GKNVVQPRLVEA 327
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
+ + V A G F T ++ G +YT+ G N LGH T+ + P + G LE +
Sbjct: 328 MASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL- 386
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q+A C A S +++ G G G LGHG R + +PR +E L L+ +
Sbjct: 387 --QVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVES--LSGLRTIA 442
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A + + G++ TWG G LGHG+++ P V +L +
Sbjct: 443 VACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDN 502
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+A G T ++ G V++ G LG N +DG+ P LV K
Sbjct: 503 FHRIACGHSLTVGLTTSGRVFTMGSTVYGQLG-NPQSDGK--------LPCLVED-KFAG 552
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +I+ Y H LT +++ +G G G+LG
Sbjct: 553 ESVEEIAC--GAY---HVAVLTSKNEVFTWGKGANGRLG 586
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 25/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 339 GEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHT 398
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ GQ++ FG +FG +G + V+ P+ VESL + + A G + TA +
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRTIAVACGVWHTAAIIEV 456
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + +EP + +E+ +IA G+ +
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIED-NFHRIACGHSLTVG 515
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVG 377
L SG V+++G + G+LG+ ++D K P L+E +F +++ + A GA+H AV+
Sbjct: 516 LTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVEDKFAGESVEEI--ACGAYHVAVLT 569
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E P +V+AL D ++A G +Y++ +
Sbjct: 570 SKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAI 620
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 30/360 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G +S A+T+ G + +G GQLG G E+ PR SL+ ++Q A
Sbjct: 45 SKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDR 102
Query: 208 RTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
T I G++Y + GK G+ E + +V+ P V++L+ V+Q + G++
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKVIQVSCGSYH 161
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ + + T+ G RLG H + D+ L+ +L +P+ +I+ G + L
Sbjct: 162 TGCLTDDKKALTWGLGLQGRLG-HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVT 220
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+Y G G GKLG GS D PRL+E L ++Q V+ G+ H+A V + G+V
Sbjct: 221 GK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKV 276
Query: 383 CTWGW-GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
TWG GR G + +G E PK + L + ++ G+ + +S+ GD+Y++G
Sbjct: 277 YTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM-- 334
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ ++GH G H N+ + + N+ +VQ+ ++S H+ AL++ G L
Sbjct: 335 TKNIGH-----GIQGIHPNMPSKHPILQ----NKNIVQVVCSSS-----HSIALSDIGAL 380
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 36/354 (10%)
Query: 162 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGAGRTMLISDAGQ 217
SK V +GS+ GQ HG+ EE P P + G+R I + + G+ + I+++G
Sbjct: 6 SKSGVVVWGSSEYGQ--HGSKGEEVSPGP-HLVDGLRHLSSISKVSCGSNYSAAITNSGD 62
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+ +G G+ +G LV P++ SLKN VVQ A + TA + G +YT+
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLV--PRVNLSLKN--VVQVACSDRHTAAILSNGELYTWGC 118
Query: 278 GNDARLGHH----TEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ +LGH + N+V P+ + LE V+Q++ G + C + G
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT---GCLTDDKKALTWG 175
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
GL G+LGHG D P+LIE L ++ + + G H A++ G++ +G G +G
Sbjct: 176 LGLQGRLGHGDTQDIFTPKLIESLAGLPIKEI--SCGGHHTAILLVTGKLYMFGGGAFGK 233
Query: 393 LGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ + +P++++ L D++ V+ G + V++ G VY++G G LGH I
Sbjct: 234 LGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGH--IF 289
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+G + L+P+ +++L++ +V IS NS H+ AL++ G +Y +G
Sbjct: 290 NGP---EHDFLSPKRLSNLEKA--FIVDISCGNS-----HSVALSDVGDIYTWG 333
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 30/296 (10%)
Query: 226 FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 281
+G +EYG G+K + P LV+ L+++ + + + G+ ++A ++ G + + +G
Sbjct: 13 WGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG + + P L +L+N VVQ+A C A S +Y+ GC GKLGH
Sbjct: 73 QLGFGNLEDCLVPRVNL-SLKN--VVQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126
Query: 342 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
G ++ Q + L + V+ V+ G++H + D + TWG G G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ PK++++L + ++ G + T ++ G +Y FG G LG + D
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDD----- 241
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VL P+L+ + I +T + H+ A+T+ GK+Y +G G G+LG
Sbjct: 242 ---VLIPRLLEG------PLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLG 286
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 440
V WG YG G EE P +V L + +I V+ G + ++ GD+ +G G
Sbjct: 10 VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG + D L P++ SLK VVQ++ ++ HT A+ +G+
Sbjct: 70 GCGQLGFGNLED--------CLVPRVNLSLKN----VVQVACSDR-----HTAAILSNGE 112
Query: 501 LYAFGAGDKGQLG 513
LY +G G+LG
Sbjct: 113 LYTWGCSKNGKLG 125
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 175/375 (46%), Gaps = 45/375 (12%)
Query: 160 VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ S G VY +G + G L GT E PRP+ S + + Q G L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G+V+ +G++ G +G+Q ++ P+LVE L + A G + T V+S G +
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 273 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
FSWG N LGH ++ + P + G LE + V+ +A G + ALA + +
Sbjct: 325 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 379
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA----VVGQDG---- 380
++ G G G LGHG+R +P+ ++ L L+ V VA WH A V+GQ
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQ--SLNGLKTVKVACSIWHTAAIVEVMGQTATSMS 437
Query: 381 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++ G
Sbjct: 438 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMG 497
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LG N+I+DG+ P LV + V E V +I+ H LT
Sbjct: 498 GTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIACGAH-----HVAVLTSR 542
Query: 499 GKLYAFGAGDKGQLG 513
+++ +G G G+LG
Sbjct: 543 SEVFTWGKGANGRLG 557
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 150/288 (52%), Gaps = 25/288 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ V++ G ++S+G ++ G LGHG+ W P+ + L+G++++ A G +
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 370
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA------------ 257
L + G+++ FG +FG +G + + V+ P+ V+SL + V+ A
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 428
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+G T++ SR +++T+ G+ RLGH + + P + +L + +IA G+ + +
Sbjct: 429 MGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTV 485
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL SG V+++G G+LG+ S +D K P L+ Q +L+ +A GA H AV+
Sbjct: 486 ALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGAHHVAVLT 540
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
V TWG G G LGHG+ E + P +V+AL D ++ G T
Sbjct: 541 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFT 588
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G + S ++++G +LGHG E P + SL + A G T+ ++
Sbjct: 430 GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT 489
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVY 273
+G V+ G + G+ + KL P LV+ L FV + A G AVL+ V+
Sbjct: 490 SGHVFTMGGTAHGQLGNSISDGKL---PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVF 546
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
T+ G + RLGH + P L+ L + V ++ G + ++
Sbjct: 547 TWGKGANGRLGHGDTEDKRTP-TLVEALRDRHVKSLSCGSNFTSSI 591
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 153/346 (44%), Gaps = 48/346 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 404
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 405 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 464
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG R PR +E + L+ V
Sbjct: 465 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 519
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 520 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 579
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLV 467
+A G T ++ G VY+ G LG N ADG +G H N
Sbjct: 580 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF------ 632
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +IS Y H LT ++Y +G G G+LG
Sbjct: 633 ---------VEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 664
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 144/334 (43%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I +L + I A G T +
Sbjct: 364 GGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAV 423
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 424 TLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQ 483
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 484 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 543
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + +E QIA G+C +AL +
Sbjct: 544 SSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHCMTVALT---TSGH 599
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 600 VYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 657
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG+ + S P +V+AL D + V G
Sbjct: 658 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 691
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 471 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 530
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 531 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 588
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 589 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 647
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 648 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 704
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 705 SGVDQSMCS 713
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G +++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 403
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L N+ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 404 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 461
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ + SVP+ V++L ++ + A
Sbjct: 462 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 521
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 522 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 573
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N QI+ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 574 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 622
Query: 528 RVDIDL 533
RV+ L
Sbjct: 623 RVEGKL 628
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS GQLG+ + R L + + + GA
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 642
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK + G +G T +SP LVE+LK+ V G FTA +
Sbjct: 643 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 698
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 152/341 (44%), Gaps = 38/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG R PR +E L L+ V
Sbjct: 419 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVR 473
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+A G T ++ G VY+ G LG N ADG + P V
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADG--------MLPVRV------ 578
Query: 474 NERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 579 -EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 618
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 143/334 (42%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I +L + I A G T +
Sbjct: 318 GGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAV 377
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 378 TLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQ 437
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 438 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 497
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L QIA G+C +AL +
Sbjct: 498 SSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHCMTVALT---TSGH 553
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 554 VYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 611
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG+ + S P +V+AL D + V G
Sbjct: 612 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 425 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 484
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 542
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 543 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 601
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 602 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 658
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 659 SGVDQSMCS 667
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G +++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 357
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L N+ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 358 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 415
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ + SVP+ V++L ++ + A
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 527
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N QI+ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 528 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 576
Query: 528 RVDIDL 533
RV+ L
Sbjct: 577 RVEGKL 582
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS GQLG+ + R L + + + GA
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 596
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK + G +G T +SP LVE+LK+ V G FTA +
Sbjct: 597 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 153/342 (44%), Gaps = 40/342 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+++++G++S G +GV V PQL+E+
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPQLIEA 363
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L N + A G + T ++ G +YT WG N LGH E + P + G LE
Sbjct: 364 LSNTNIEFVACGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 421
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + ++ S +++ G G G LGHG R PR +E L L+
Sbjct: 422 IHVSSISCGPWHTAVVS---SAGQLFTFGDGTFGVLGHGDRKSISLPREVE--SLKGLRT 476
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E + VP V AL
Sbjct: 477 VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALV 536
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T + G VY+ G LG N +DG+ P
Sbjct: 537 EPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLG-NPQSDGK--------LPA------ 581
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V ++ + S+ H LT ++Y +G G G+LG
Sbjct: 582 RVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 623
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 40/318 (12%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 288
+GV+ L+ P+ +ES + V A G A+++++G + FSWG ++ RLGH +
Sbjct: 297 FGVKMDSLL--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 352
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ + P L+ L N + +A G + A+ + + G G LGHG+
Sbjct: 353 SDVLHPQ-LIEALSNTNIEFVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHW 410
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
P+ + L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+ V+
Sbjct: 411 VPKRVNG-PLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVE 469
Query: 409 ALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGN 456
+L ++ + A G + T V E G ++++G G+ LGH G+
Sbjct: 470 SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GD 522
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
+ A L P V++L + N Q++ +S+ T A T SG +Y G+ GQLG
Sbjct: 523 KEAK-LVPTCVSALVEPN--FCQVACGHSL-----TIARTTSGHVYTMGSPVYGQLG--- 571
Query: 517 VNNQTERGNPERVDIDLS 534
N Q++ P RV+ LS
Sbjct: 572 -NPQSDGKLPARVEGKLS 588
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 72/346 (20%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q IA G H+ VT +G ++S+G S G+LGHG + P+ I +L I A G
Sbjct: 318 QNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEY 377
Query: 208 RTMLISDAGQVYAFGKD------------------------------------------- 224
T ++ +G +Y +G
Sbjct: 378 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 437
Query: 225 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 266
+FG+ +GV G K ++ P+ VESLK + VQAA G + TA +
Sbjct: 438 SSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNS 497
Query: 267 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G+++T+ G+ RLGH + + P + L Q+A G+ L +A
Sbjct: 498 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVSALVEPNFCQVACGHS--LTIART 554
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
SG VY++G + G+LG+ ++D K P +E +L +A GA+H AV+ V
Sbjct: 555 TSGH-VYTMGSPVYGQLGN-PQSDGKLPARVEG-KLSRSSVEEIACGAYHVAVLTSKTEV 611
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
TWG G G LGHG+ + +++P +V+AL D + +A G T +
Sbjct: 612 YTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAI 657
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 130/313 (41%), Gaps = 35/313 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ V+S G +++FG + G LGHG + PR + SL+G+R +QAA G T +
Sbjct: 430 GPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAV 489
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 490 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVSALVEPNFCQVACGH 547
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T + G VYT +LG+ + P + G L V +IA G ++ L
Sbjct: 548 SLTIARTTSGHVYTMGSPVYGQLGNPQSDGKL-PARVEGKLSRSSVEEIACGAYHVAVLT 606
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ + AA H V
Sbjct: 607 ---SKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAICLHKWV 663
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 423
G D +C+ + R+ C G C S K A N KA V Y
Sbjct: 664 SGVDQSMCSGCRLPLNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCY 723
Query: 424 TTFVVSEDGDVYS 436
+ + D S
Sbjct: 724 NKLRKAMETDASS 736
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 145 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
R + + IA G H +TSK VY++G ++G+LGHG T+++ P + +L+ ++ A
Sbjct: 589 RSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIA 648
Query: 204 AGAGRTMLI 212
G T I
Sbjct: 649 CGTNFTAAI 657
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 153/346 (44%), Gaps = 48/346 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L+++
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N+ + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG R PR +E + L+ V
Sbjct: 419 VSAISCGPWH---TAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVR 473
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG+++ VP V AL +
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLV 467
+A G T ++ G VY+ G LG N ADG +G H N
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF------ 586
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +IS Y H LT ++Y +G G G+LG
Sbjct: 587 ---------VEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 618
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 143/334 (42%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I +L + I A G T +
Sbjct: 318 GGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAV 377
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 378 TLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQ 437
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 438 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 497
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L QIA G+C +AL +
Sbjct: 498 SSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAALVEPNFCQIACGHCMTVALT---TSGH 553
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 554 VYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 611
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG+ + S P +V+AL D + V G
Sbjct: 612 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 425 GPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAV 484
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + T+LV P V +L Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGH 542
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 543 CMTVALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 601
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 602 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWV 658
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 659 SGVDQSMCS 667
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G +++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 357
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L N+ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 358 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 415
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ + SVP+ V++L ++ + A
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 527
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N QI+ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 528 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 576
Query: 528 RVDIDL 533
RV+ L
Sbjct: 577 RVEGKL 582
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS GQLG+ + R L + + + GA
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYH 596
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK + G +G T +SP LVE+LK+ V G FTA +
Sbjct: 597 VAVLTSRTEVYTWGKGANGRLGHG--DTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 175/375 (46%), Gaps = 45/375 (12%)
Query: 160 VTSKGVVYSFGSN-SSGQLGHGTTEEE------WRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ S G VY +G + G L GT E PRP+ S + + Q G L+
Sbjct: 216 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 275
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G+V+ +G++ G +G+Q ++ P+LVE L + A G + T V+S G +
Sbjct: 276 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 333
Query: 273 YTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
FSWG N LGH ++ + P + G LE + V+ +A G + ALA + +
Sbjct: 334 --FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG-TWHSALAT--ANGKL 388
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA----VVGQDG---- 380
++ G G G LGHG+R +P+ ++ L L+ V VA WH A V+GQ
Sbjct: 389 FTFGDGAFGVLGHGNRESVSYPKEVQ--SLNGLKTVKVACSIWHTAAIVEVMGQTATSMS 446
Query: 381 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++ G
Sbjct: 447 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMG 506
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LG N+I+DG+ P LV + V E V +I+ H LT
Sbjct: 507 GTAHGQLG-NSISDGK--------LPCLVQD-RLVGEFVEEIACGAH-----HVAVLTSR 551
Query: 499 GKLYAFGAGDKGQLG 513
+++ +G G G+LG
Sbjct: 552 SEVFTWGKGANGRLG 566
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 25/275 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ V++ G ++S+G ++ G LGHG+ W P+ + L+G++++ A G +
Sbjct: 320 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 379
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA------------ 257
L + G+++ FG +FG +G + + V+ P+ V+SL + V+ A
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 437
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+G T++ SR +++T+ G+ RLGH + + P + +L + +IA G+ + +
Sbjct: 438 MGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFHKIACGHTFTV 494
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL SG V+++G G+LG+ S +D K P L+ Q +L+ +A GA H AV+
Sbjct: 495 ALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFVEEIACGAHHVAVLT 549
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V TWG G G LGHG+ E + P +V+AL D
Sbjct: 550 SRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRD 584
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G + S ++++G +LGHG E P + SL + A G T+ ++
Sbjct: 439 GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT 498
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVY 273
+G V+ G + G+ + KL P LV+ L FV + A G AVL+ V+
Sbjct: 499 SGHVFTMGGTAHGQLGNSISDGKL---PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVF 555
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
T+ G + RLGH + P L+ L + V ++ G + ++
Sbjct: 556 TWGKGANGRLGHGDTEDKRTP-TLVEALRDRHVKSLSCGSNFTSSI 600
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 29/327 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T+ G VY+ G+N QLGH + RP I LQ ++ A G+
Sbjct: 40 QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTK--RPLLIPELQNYVVVAIACGSRH 97
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M +++ GQV ++G + G+ + ++ P+++ SL + VVQ A GN + L+
Sbjct: 98 SMALTEWGQVLSWGDNDCGQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTS 156
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAG--YCYLLALACQ 322
G +Y SWG++ +P H PL L TL IP+ IA G + +L++
Sbjct: 157 CGELY--SWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLIS---- 210
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
AV+ G G+LG ++ +P ++ + L ++ VA G + + +G V
Sbjct: 211 -KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGV 267
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 441
T G G YG LGHG+ E +P++V L VA G+ +T +V G VY FG G
Sbjct: 268 FTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGS 327
Query: 442 SASLGHNAIADGQGNRHANVLT-PQLV 467
S L GNR N +T PQ V
Sbjct: 328 SGQL---------GNRSTNSVTLPQEV 345
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 50/372 (13%)
Query: 166 VYSFGSNSSGQLGHGTTEEE---------WRPR-PIRSLQGIRIIQAAAGAGRTMLISDA 215
++ +G+ S GQLG G E+E W+P P+R Q A G T+ ++
Sbjct: 3 LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLR--------QIACGHRHTLFLTAN 54
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VYA G + + + + + P L+ L+N VV A G+ + L+ G+V
Sbjct: 55 GKVYACGNNDQAQLGHNLPTKR----PLLIPELQNYVVVAIACGSRHSMALTEWGQV--L 108
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG++ +LG T+ + +E ++ +L + VVQIA G + LAL S +YS G
Sbjct: 109 SWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT---SCGELYSWGS 165
Query: 334 GLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
+ G+LG + H + LL + +A G H+ ++ + V +G+GR C
Sbjct: 166 NIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAV--FGFGRNNC 223
Query: 393 --LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG +E + P ++ L + VA GD + ++ +G V++ G G LGH +
Sbjct: 224 GQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGS- 282
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 509
+ N + P++V L + + Q++ N HT AL S G++Y FG G
Sbjct: 283 -------NTNEMLPRMVMEL--MGSTITQVACGNR-----HTLALVPSRGRVYGFGLGSS 328
Query: 510 GQLGIELVNNQT 521
GQLG N+ T
Sbjct: 329 GQLGNRSTNSVT 340
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS ++ V+ FG N+ GQLG P +++L+ + + A G ++ +
Sbjct: 202 GGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++ GR
Sbjct: 262 TNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVPSRGR 319
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY F G+ +LG+ + + P +LG
Sbjct: 320 VYGFGLGSSGQLGNRSTNSVTLPQEVLG 347
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2736
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 2737 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2794
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 2851
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 2909
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 2970 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 3006
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 2775 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2834
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 2835 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 2892
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + P+L + + +A
Sbjct: 2893 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDVAV 2944
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 2945 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 2999
Query: 372 HAA 374
H+A
Sbjct: 3000 HSA 3002
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2734
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 2735 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2792
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 2793 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 2848
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 2849 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 2908
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 2909 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 2953
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 2954 STGDVYAWGSNSEGQLGLGHTNHVRE 2979
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 2695 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2754
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 2755 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2812
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 506
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 2813 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 2859
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 2860 GDYGKLGL---GNSTAKSSPQKVDV 2881
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 182/370 (49%), Gaps = 38/370 (10%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
++ K ++ +G+ G+LG G E+E P + + I Q A G T++I+ G
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
++Y+ G + +G+ + QG K + QL+ L +AA G + T ++ G++ FS
Sbjct: 102 KIYSCGNNDYGQLGHE-QGRKRL---QLILGLDAFVFKKAACGAYHTIAVNEWGQL--FS 155
Query: 277 WGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
WG+++ +LG +++ N +E P ++ TL +VQIA G + LAL + +YS G
Sbjct: 156 WGSNSEGQLGLNSK-NFMECSPRMVKTLGTSIIVQIACGMKHALALT---NNGELYSWGS 211
Query: 334 GLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G E P+LI L + +A G +H+ + + G + WG +G
Sbjct: 212 NSEGQLGLGVDIRCEMKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG + + ++P +Q L + K + A G+ + ++ DG V++ G G LGH
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH----- 324
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQ 511
G N N + P+ V L + V QIS HT AL S G++YA+G G GQ
Sbjct: 325 GSNN---NEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSQGRVYAWGLGGAGQ 374
Query: 512 LGIELVNNQT 521
LG NN T
Sbjct: 375 LG----NNST 380
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 13/307 (4%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G +++ +T G +YS G+N GQLGH + R + I L +AA G
Sbjct: 83 EIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRK--RLQLILGLDAFVFKKAACG 140
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 264
A T+ +++ GQ++++G +S E + G+ + SP++V++L +VQ A G
Sbjct: 141 AYHTIAVNEWGQLFSWGSNS--EGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHAL 198
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
L+ G +Y++ ++ +LG + L+ TL +P+ IA G + ++A S
Sbjct: 199 ALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYH--SIAISKS 256
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQDGRVC 383
G A++ G G+LG D ++ L Q Q L N + A G + + DG V
Sbjct: 257 G-AIFGWGKNTFGQLG---LNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVF 312
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 442
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 313 TCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 372
Query: 443 ASLGHNA 449
LG+N+
Sbjct: 373 GQLGNNS 379
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGA 206
+A G H+IAV G ++S+GSNS GQLG + E PR +++L I+Q A G
Sbjct: 135 KKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGM 194
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +++ G++Y++G +S G+ GV + P+L+ +L + + A G + + +
Sbjct: 195 KHALALTNNGELYSWGSNSEGQLGLGVD-IRCEMKPKLINTLAGVPIAFIACGGYHSIAI 253
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
S+ G + F WG + +LG + N P+ L TL N V A G + + L
Sbjct: 254 SKSGAI--FGWGKNTFGQLGLNDTQNRNLPYQL-QTLRNAKVCYAACGEEFSVFLTVDG- 309
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G+ G+LGHGS +E PR + +L+ ++ G H A+V GRV
Sbjct: 310 --GVFTCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVTQISCGKRHTLALVPSQGRVY 365
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQ 408
WG G G LG+ + + P+VV+
Sbjct: 366 AWGLGGAGQLGNNSTRSTTTPQVVR 390
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HSIA++ G ++ +G N+ GQLG T+ P +++L+ ++ AA G ++ +
Sbjct: 246 GGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFL 305
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ V L V Q + G T A++ +GR
Sbjct: 306 TVDGGVFTCGAGMYGQLGHGSNNNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSQGR 363
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG+++ + P + G
Sbjct: 364 VYAWGLGGAGQLGNNSTRSTTTPQVVRG 391
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 152/295 (51%), Gaps = 13/295 (4%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
++G HS+ + S G V S G NS GQLG T +P I +L+ + + + G ++
Sbjct: 1 MSGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 60
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ G+V+A+G S E + G+ K T P+ +++L +I ++Q A G++ + LS +
Sbjct: 61 AVCHKGRVFAWGAAS--EGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118
Query: 270 GRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 119 GQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLSGTSF 175
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G+ + P L+ + L++ V ++ G H AV+ QDG+V T+G
Sbjct: 176 GWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSV--VFISCGYEHTAVLTQDGKVFTFG 233
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 440
YG LGH + + P++V+ + + + + G Y T V G V SFG G
Sbjct: 234 DNSYGQLGHDSTAEKRGPQLVERIEGLVS-QIDCGSYHTLAYVYTTGQVVSFGRG 287
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 25/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L I+IIQ A G ++
Sbjct: 55 GKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLA 114
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 115 LSEDGQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 173
Query: 272 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+F WG++ A G++ +P L+G L+ + VV I+ GY + L
Sbjct: 174 --SFGWGSNNAGQLALSGNNAPVQRYKP-VLVGALKTLSVVFISCGYEHTAVLT---QDG 227
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 385
V++ G G+LGH S +++ P+L+E+ + L Q + G++H A V G+V ++
Sbjct: 228 KVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQ---IDCGSYHTLAYVYTTGQVVSF 284
Query: 386 GWGRYGCLGHGNE-----ECESVPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G G GC E V ++ A L DV+ H+ G Y FV +
Sbjct: 285 GRGP-GCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGTYANFVTT 334
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V S G G+LG + P I + L++ +V+ G H+ V GRV WG
Sbjct: 15 TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHV--ALVSCGKEHSLAVCHKGRVFAWG 72
Query: 387 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G LG G +E +PK ++ L D+K I VA G Y + +SEDG V+S+G L
Sbjct: 73 AASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQL 132
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G G + +PQ V SL+ I L AH+FAL+ SG + +G
Sbjct: 133 -------GLGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLSGTSFGWG 178
Query: 506 AGDKGQLGIELVNNQTERGNP 526
+ + GQL + N +R P
Sbjct: 179 SNNAGQLALSGNNAPVQRYKP 199
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V+S+G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 104 QVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 163
Query: 208 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S +G + +G ++ G+ A G P LV +LK + VV + G TAVL
Sbjct: 164 HSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+++G+V+TF + +LGH + P L+ +E + V QI G + LA
Sbjct: 224 TQDGKVFTFGDNSYGQLGHDSTAEKRGPQ-LVERIEGL-VSQIDCGSYHTLAY------- 274
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
VY+ G + G G HP + +
Sbjct: 275 -VYTTGQVVSFGRGPGCTRSSPHPEALAE 302
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 28/309 (9%)
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
+G ++L+ G V + G +S G+ G +GT P+ + +L+ + V + G +
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+ +GRV+ + ++ +LG + TL +I ++Q+A G+ + LAL+
Sbjct: 60 LAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALS--- 116
Query: 324 SGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
V+S G G+LG G + P+ + + + L V AAG H+ + G
Sbjct: 117 EDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSFALSLSGTS 174
Query: 383 CTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
WG G L G+ P +V AL + + ++ G T V+++DG V++FG
Sbjct: 175 FGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGD 234
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTES 498
LGH++ A+ +G PQLV +++ V QI + HT A + +
Sbjct: 235 NSYGQLGHDSTAEKRG--------PQLV---ERIEGLVSQIDCG-----SYHTLAYVYTT 278
Query: 499 GKLYAFGAG 507
G++ +FG G
Sbjct: 279 GQVVSFGRG 287
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 23/274 (8%)
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + +L +G V + + +LG P +P + LE + V ++ G + LA
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCGKEHSLA 61
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+ C V++ G G+LG G + P+ I+ L +++ + VA G +H+ +
Sbjct: 62 V-CHKG--RVFAWGAASEGQLGIGELKETTFIPKKIKT--LADIKIIQVACGHYHSLALS 116
Query: 378 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG+V +WG +G LG G E ++ P+ V++L + VA G +F +S G +
Sbjct: 117 EDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG 176
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + L + N P LV +LK ++ VV IS HT LT
Sbjct: 177 WGSNNAGQLALSG-----NNAPVQRYKPVLVGALKTLS--VVFISCGYE-----HTAVLT 224
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ GK++ FG GQLG ++ E+ P+ V+
Sbjct: 225 QDGKVFTFGDNSYGQLG---HDSTAEKRGPQLVE 255
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSN++GQL G+ + ++P + +L+ + ++ +
Sbjct: 156 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISC 215
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG +S+G + G T PQLVE ++ + V Q G++ T
Sbjct: 216 GYEHTAVLTQDGKVFTFGDNSYG--QLGHDSTAEKRGPQLVERIEGL-VSQIDCGSYHTL 272
Query: 264 AVLSREGRVYTFSWGND-ARLGHH----TEPNDVEPHPLLGTLENIPVVQIAAG 312
A + G+V +F G R H E +DV LE++ V I AG
Sbjct: 273 AYVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAG 326
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 151/313 (48%), Gaps = 17/313 (5%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R + G H++ + G VY+ GSNS GQLGH P + +L +I +
Sbjct: 33 RGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSC 90
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +++ GQV+ +G G+ T V P+L++ L + + Q GN
Sbjct: 91 GRAHSVAVNEQGQVFVWGAGDGGQLGLETAETA-VRIPRLLKKLCDHSISQVVCGNQHCI 149
Query: 265 VLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALAC 321
LSR+G+++T+ + +LG E + + P P + +L IP+ QI AG +C+ L+L
Sbjct: 150 ALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSP-VKSLAGIPLAQITAGGDHCFALSL-- 206
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
SG AV+ G G+LG + D P I + L Q VV ++ G H A + + G
Sbjct: 207 --SG-AVFGWGKNKAGQLGLNDKQDRAVPCHI---KFLRSQRVVYISCGDEHTAALTKSG 260
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGC 439
+ T+G G G LGHG+ E +P+ V L + + G + T V G VY+FGC
Sbjct: 261 GLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGC 320
Query: 440 GESASLGHNAIAD 452
LG +AD
Sbjct: 321 NSHGQLGTGILAD 333
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 140/280 (50%), Gaps = 17/280 (6%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQ 201
C SQ + G H IA++ G ++++G NSSGQLG G E + P P++SL GI + Q
Sbjct: 134 CDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQ 193
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
AG +S +G V+ +GK+ G + G+ + P ++ L++ VV + G+
Sbjct: 194 ITAGGDHCFALSLSGAVFGWGKNKAG--QLGLNDKQDRAVPCHIKFLRSQRVVYISCGDE 251
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
TA L++ G ++TF G+ +LGH + N++ P ++ L V QI G + LA
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM-ELMGTEVSQITCGRHHTLAFV- 309
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQP----VVVAAGAWHAAVV 376
PS VY+ GC G+LG G D + P ++ F LNL+ + + G V+
Sbjct: 310 -PSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKYTVI 368
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
+C G + L + +E+C VP+ + N K++
Sbjct: 369 ---KIICG---GDHSFLMYSSEQCPEVPEDFRVFNVSKSL 402
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 27/348 (7%)
Query: 169 FGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
+G+ GQLG G + PR G + + A G T+ + G VY G +S G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+ + G SP+LV +L + + G + ++ +G+V+ + G+ +LG T
Sbjct: 64 QLGHDKAGN----SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLET 119
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTD 346
V LL L + + Q+ G + +AL+ +++ G G+LG G T
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALS---RDGQLFTWGQNSSGQLGLGKGETS 176
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
+ P ++ + L + AG H + G V WG + G LG +++ +VP
Sbjct: 177 KLSPSPVKSLAGIPLAQI--TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCH 234
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
++ L + ++++ GD T +++ G +++FG G LGH G N N L P+
Sbjct: 235 IKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGH-----GSSN---NELLPRR 286
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
V L + V QI+ HT A SG +YAFG GQLG
Sbjct: 287 VMEL--MGTEVSQITCGRH-----HTLAFVPSSGTVYAFGCNSHGQLG 327
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 137/305 (44%), Gaps = 29/305 (9%)
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ GV+G V P++ + + A G T L ++G VYT + +LGH
Sbjct: 10 GQLGIGVEGNP-VFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHD 68
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRT 345
N E L+G L+ + ++ G + +A+ Q V+ G G GG+LG + T
Sbjct: 69 KAGNSPE---LVGALDTQKITMVSCGRAHSVAVNEQGQ---VFVWGAGDGGQLGLETAET 122
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-P 404
+ PRL+++ ++ VV G H + +DG++ TWG G LG G E + P
Sbjct: 123 AVRIPRLLKKLCDHSISQVV--CGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSP 180
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V++L + + G F +S G V+ +G ++ LG N D H L
Sbjct: 181 SPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS 240
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
Q RVV IS + HT ALT+SG L+ FG G +GQLG NN+
Sbjct: 241 Q----------RVVYISCGDE-----HTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-- 283
Query: 525 NPERV 529
P RV
Sbjct: 284 -PRRV 287
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 151/341 (44%), Gaps = 38/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+++++G++S G +GV V P+L++S
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPKLIDS 360
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 361 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 420
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG PR +E L + V+
Sbjct: 421 VSSISCGPWH---TAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVE--SLKGHRTVI 475
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG++E + VP V AL D
Sbjct: 476 SACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDP 535
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T ++ G VY+ G LG N ADG+ P V
Sbjct: 536 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGK--------LPTRV------ 580
Query: 474 NERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + S I A H LT ++Y +G G G+LG
Sbjct: 581 -EGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 620
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 431
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
+++ +GQ++ FG +FG +G TK V+ P+ VESLK V +A G + TA +
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVWHTAAVVEI 489
Query: 269 -----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + L + ++A G+ +
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVDPNFCRVACGHSLTV 548
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL SG VY++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 549 ALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPTRVEG-KLAKSFVEEIACGAYHVAVLT 603
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 604 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 654
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG T+ +PR + SL+G R + +A G T +
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAV 486
Query: 213 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ +G+++ +G G +G + KLV P V +L + + A G+
Sbjct: 487 VEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVDPNFCRVACGH 544
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + P + G L V +IA G ++ L
Sbjct: 545 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLT 603
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ + A H V
Sbjct: 604 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 661 SGVDQSMCS 669
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G + D P+ +E +L++Q + A G HAA+V + G + +WG G LGHG +
Sbjct: 295 GMKMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV 352
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
PK++ +L++ VA G+Y T V+ GD+Y++G G +N G GN ++
Sbjct: 353 LHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGT-----YNFGLLGHGNEVSHW 407
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ K+VN + I +++ HT +T SG+L+ FG G G LG
Sbjct: 408 VP-------KRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLG 452
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 53/375 (14%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTE--------EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
++++ V+++G+ + GQLGHG+ E EE PR + + +G I + GA +
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G++Y +G + + + +G + + P++V++L+ I +V + G + T + EG+
Sbjct: 61 IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120
Query: 272 VYTFSWGNDAR-----LGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPS 324
++T+ WG LGH ++ P L+ TL + +PV + G + +AL
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPR-LVRTLVDQGVPVKSVECGELHTVALTKDGE 179
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
+++ G G G+LG+G+ + + P +E F N+ ++AG + + G V +
Sbjct: 180 ---IWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIAS--ISAGRDFTFAITEHGEVYS 234
Query: 385 WGWGRYGCLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
WG + LG G E++P VV+AL++V V+ G V+ DG ++ +G
Sbjct: 235 WGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
A L L P +T LK +E ++ + +T AL+ S
Sbjct: 295 ----AKL---------------WLEPHEMTILK--DETIISVQCG-----RYYTAALSAS 328
Query: 499 GKLYAFGAGDKGQLG 513
G L+ FG G LG
Sbjct: 329 GNLFTFGKGHSNCLG 343
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTM 210
G HS A+ +G +Y++GSN QLGHG++ ++ + PR + +L+GI+I+ + G T
Sbjct: 54 GATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTG 113
Query: 211 LISDAGQVYAF---GKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAV 265
+ + G+++ + G G G G + + P+LV +L + + V G T
Sbjct: 114 AVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVA 173
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L+++G ++ + G RLG+ N P P+ + + I+AG + A+
Sbjct: 174 LTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVE-YFADENIASISAGRDFTFAITEHGE- 231
Query: 326 MAVYSVGC------GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
VYS G GLGG L E P ++E L N+ V+AG HAA V D
Sbjct: 232 --VYSWGINSHSQLGLGGGLTVDYYNMETIPVVVE--ALSNVNVAQVSAGYDHAAAVTND 287
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G++ WG + P + L D I V G Y T +S G++++FG
Sbjct: 288 GKMFMWG-----------AKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGK 336
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
G S LGH G R L P LV SL + N
Sbjct: 337 GHSNCLGH-------GERKTQ-LQPLLVESLNRYN 363
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 38/266 (14%)
Query: 266 LSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+S + V+T+ G +LGH + ++ P +L T E + ++ G +
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPR-ILETFEGKNIAKLDFGATHSA 59
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAV 375
A+ + +Y+ G +LGHGS + PR+++ L ++ V ++ G +H
Sbjct: 60 AIDKEGK---LYTWGSNEYHQLGHGSSNQDIQSIPRVVDA--LRGIKIVDISCGEYHTGA 114
Query: 376 VGQDGRVCTWGWGRY-----GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVV 428
V ++G++ TWGWG G LGH E ES+P++V+ L D V V G+ T +
Sbjct: 115 VDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL 174
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
++DG+++++G GE LG N +D N P+ V +E + IS
Sbjct: 175 TKDGEIWAWGNGEYGRLG-NGASD-------NFEVPEPVEYF--ADENIASISAGRDF-- 222
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGI 514
TFA+TE G++Y++G QLG+
Sbjct: 223 ---TFAITEHGEVYSWGINSHSQLGL 245
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+T G ++++G+ G+LG+G ++ P P+ I +AG T I
Sbjct: 167 GELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAI 226
Query: 213 SDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ G+VY++G +S + G V + T P +VE+L N+ V Q + G A ++
Sbjct: 227 TEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTN 286
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G++ F WG L EPH + L++ ++ + G Y AL+ + +
Sbjct: 287 DGKM--FMWGAKLWL---------EPHEMT-ILKDETIISVQCGRYYTAALSASGN---L 331
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
++ G G LGHG R + P L+E N+
Sbjct: 332 FTFGKGHSNCLGHGERKTQLQPLLVESLNRYNV 364
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 146 ENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGIR 198
EN +I AG + A+T G VYS+G NS QLG G E P + +L +
Sbjct: 211 ENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVN 270
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ Q +AG +++ G+++ + G KL P + LK+ ++
Sbjct: 271 VAQVSAGYDHAAAVTNDGKMFMW-------------GAKLWLEPHEMTILKDETIISVQC 317
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G ++TA LS G ++TF G+ LGH ++P L+ +L VV + GY ++ A
Sbjct: 318 GRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQP-LLVESLNRYNVVSMTCGYSHMGA 376
Query: 319 LACQPSGMAV 328
L +P AV
Sbjct: 377 L-TKPFAEAV 385
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 23/284 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + G LGHG W P+ + L+GI + + G T
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHT 468
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG SFG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 469 AVVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEV 526
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + +E Q+A G+C +
Sbjct: 527 MAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP-NFCQVACGHCLTV 585
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + VY++G + G+LG+ ++ D P +E N + + GA+H AV+
Sbjct: 586 ALT---TSGHVYTMGSAVYGQLGN-AQADGMLPVRVEGKLHKNFVEEI-SCGAYHVAVLT 640
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ + ++ P +V+AL D + V G
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCG 684
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 154/348 (44%), Gaps = 52/348 (14%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V+ P+L+++
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 397
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 398 LSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + + S +++ G G G LGHG R PR +E + L+
Sbjct: 456 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRESISVPREVESLK--GLRT 510
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++ + VP V AL
Sbjct: 511 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALV 570
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQ 465
+ VA G T ++ G VY+ G LG NA ADG +G H N
Sbjct: 571 EPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLHKNF---- 625
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +IS H LT ++Y +G G G+LG
Sbjct: 626 -----------VEEISCG-----AYHVAVLTSKTEVYTWGKGANGRLG 657
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG E PR + SL+G+R ++AA G T +
Sbjct: 464 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 523
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G +G KLV P V +L Q A G+
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLV--PTCVAALVEPNFCQVACGH 581
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 582 CLTVALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 640
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 641 ---SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIHKWV 697
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 698 SGVDQSMCS 706
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G A+++++G +Y SWG ++ RLGH + DV L+
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVD-CDVSQPKLID 396
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L ++ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 397 ALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDISHWVPKHVNG-PLE 454
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH AVV G++ T+G G +G LGHG+ E SVP+ V++L ++ + A
Sbjct: 455 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 514
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 515 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKGPK-LVPTCV 566
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 567 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NAQADGMLPV 615
Query: 528 RVDIDL 533
RV+ L
Sbjct: 616 RVEGKL 621
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L+S G++Y++G++S G +GV V P+L+++
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCD--VAHPKLIDA 361
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P L G LE
Sbjct: 362 LTHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + + + S +++ G G G LGHG R P+ +E L L+
Sbjct: 420 IHVSSISCGPFHTVIVT---SAGQLFTFGDGSFGVLGHGDRESLSVPKEVE--SLKGLRT 474
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 475 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALV 534
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G +A+ GN A+ + P V
Sbjct: 535 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGMLPARV---- 581
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 582 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 621
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 147/341 (43%), Gaps = 71/341 (20%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ V+ +G +YS+G S G+LGHG + P+ I +L + I A G T +
Sbjct: 321 GGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAV 380
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 381 TLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFHTVIVTSAGQ 440
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 441 LFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNC 500
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + + P + L Q+A G+C +AL +
Sbjct: 501 SSGKIFTWGDGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 556
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 557 VYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 614
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G G LGHGN + ++ P +V+AL D + +V G T +
Sbjct: 615 GANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAI 655
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 150/355 (42%), Gaps = 37/355 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H++ VTS G +++FG S G LGHG E P+ + SL+G+R ++AA G T +
Sbjct: 428 GPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAV 487
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + ++LV P V +L Q A G+
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGH 545
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 546 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLT 604
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG+ D+ P L+E + ++ VV AA H +
Sbjct: 605 ---SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAICIHKWI 661
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 423
G D +C+ R+ C C S K A N K V Y
Sbjct: 662 SGVDQSMCSGCRQPFNLRRKRHNCYNCALIFCHSCSSKKSLKASLAPNPSKPYRVCDSCY 721
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNER 476
+ + D+YS + G + D +N ++ + S K ++ R
Sbjct: 722 SKLTKGLETDMYSSAKRGAVVQGFSDTVDEDTETRSNAQLSRMSSIDSFKHMDSR 776
>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1054
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 161/347 (46%), Gaps = 38/347 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q G+ L + G+V+ +G++ G +G ++ P+LVES
Sbjct: 247 PKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVES 304
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L V + G F T +S G + F+WG+ + LG+ T + P + G LE
Sbjct: 305 LSVTIVDFISCGEFHTCAISASGDL--FNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEG 362
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + + S +Y+ G G G LGHG+R +P+ +E L +
Sbjct: 363 LQVLSVACGSWHSALIT---STGRLYTFGDGKFGALGHGNRESAAYPKEVEA--LNGFRT 417
Query: 364 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
V VA G WH+A + + ++ TWG G LG G++E +P +QAL +
Sbjct: 418 VKVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH 477
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+ G T ++ G VY+ G ++ LG N +DG+ P LV K
Sbjct: 478 NFHQLGCGQNMTVALATSGHVYTMGSSDNGQLG-NPKSDGK--------HPCLVKD-KLA 527
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
NE V +IS AH LT ++Y +G G G+LG +N++
Sbjct: 528 NELVEEISCGA-----AHVAVLTSRSEVYTWGLGANGRLGHGDLNDK 569
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 147/289 (50%), Gaps = 22/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ A+++ G ++++G S +G LG+ T W P+ + L+G++++ A G+ +
Sbjct: 316 GEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHS 375
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ G++Y FG FG +G + + P+ VE+L V+ A G + +A +
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRES--AAYPKEVEALNGFRTVKVACGVWHSAAIVEA 433
Query: 269 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
++YT+ G+ RLG + + P L LE+ Q+ G +AL
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH-NFHQLGCGQNMTVAL 492
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
A SG VY++G G+LG+ ++D KHP L++ +L N ++ GA H AV+
Sbjct: 493 AT--SGH-VYTMGSSDNGQLGN-PKSDGKHPCLVKD-KLANELVEEISCGAAHVAVLTSR 547
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 548 SEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCI 596
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 32/287 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 296
V P+ +ES + V Q G+ A+ +R+G V+T WG + RLGH T+ D+
Sbjct: 244 VLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFT--WGEELGGRLGHGTD-TDISRPK 300
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L+ +L V I+ G + A++ + + G G LG+ + P+ +
Sbjct: 301 LVESLSVTIVDFISCGEFHTCAISAS-GDLFNWGDGSYRAGLLGYDTGASHWLPKRVSG- 358
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L LQ + VA G+WH+A++ GR+ T+G G++G LGHGN E + PK V+ALN + +
Sbjct: 359 PLEGLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTV 418
Query: 417 HVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
VA G + + + E +Y++G G+ L GQG++ A L P
Sbjct: 419 KVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRL-------GQGDKEAR-LIPTC 470
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ +L + N Q+ ++ T AL SG +Y G+ D GQLG
Sbjct: 471 LQALLEHN--FHQLGCGQNM-----TVALATSGHVYTMGSSDNGQLG 510
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS +TS G +Y+FG G LGHG E P+ + +L G R ++ A G + I
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAI 430
Query: 213 SDAG----------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+A ++Y +G G + +L+ P +++L Q G
Sbjct: 431 VEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLI--PTCLQALLEHNFHQLGCGQNM 488
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT ++ +LG+ P HP L L N V +I+ G ++ L
Sbjct: 489 TVALATSGHVYTMGSSDNGQLGN---PKSDGKHPCLVKDKLANELVEEISCGAAHVAVLT 545
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAV 375
S VY+ G G G+LGHG D+K P ++E + +++ + + H V
Sbjct: 546 ---SRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCICIHRWV 602
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 409
G D VCT + R+ C G C S KV++A
Sbjct: 603 SGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKA 645
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 53/369 (14%)
Query: 186 WRPRP--IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG--------EAEYGVQG 235
++P P I L+ I Q A G G T+ + G VY++G + G + V+G
Sbjct: 10 FQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69
Query: 236 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPND- 291
+P+++E L+++ V+Q A G+ T L+++G++Y++ G +LGH P D
Sbjct: 70 YPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDE 129
Query: 292 ----VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 345
+P P L+ L+N+ V Q+A G + +A+ + +YS G G G+LGH +
Sbjct: 130 DGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVL---NNGHLYSWGAGACGQLGHPDTSS 186
Query: 346 ---DEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
DE PR + + L + + G H V+ G + +G G G LG G
Sbjct: 187 FPADEDGYPYQPIPRCVTALKPFKL--IHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFG 244
Query: 397 N--------EECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
N + C VPK +++L + + ++ GD + +S +G VY++G LG
Sbjct: 245 NISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLG 304
Query: 447 HNAIADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
+ I D N PQ V +L +N+++V IS + HT ALTE G LY+F
Sbjct: 305 LDDIRDLPKNTDNKPYQPFPQKVVAL--MNKKIVAISCGET-----HTLALTEGGHLYSF 357
Query: 505 GAGDKGQLG 513
G GQLG
Sbjct: 358 GGNTCGQLG 366
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 161/358 (44%), Gaps = 54/358 (15%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPRPIRSLQGIR 198
Q G GH++AV KG VYS+G+++ GQLG + ++ + PR I LQ ++
Sbjct: 27 QVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVK 86
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY--------GVQGTKLVTSPQLVESLKN 250
+IQ A G T+ ++ G++Y++G G+ + G P+L+ LKN
Sbjct: 87 VIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKN 146
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPNDVEPHPL------LGTL 301
+ V Q A G T + G +Y++ G +LGH + P D + +P + L
Sbjct: 147 LEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTAL 206
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----------PR 351
+ ++ + G + + L Q +Y G G G+LG G+ + P+
Sbjct: 207 KPFKLIHASCGDVHTMVLTDQGE---IYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPK 263
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG----------HGNEECE 401
IE Q + + V ++ G H+ + ++G V WG YG LG N+ +
Sbjct: 264 KIESLQGIFI--VSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNR 457
P+ V AL + K + ++ G+ T ++E G +YSFG LG + G+G +
Sbjct: 322 PFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQYVKELEKGRGKK 379
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 34/232 (14%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPRPIRSLQ 195
E Q G H++AV + G +YS+G+ + GQLGH T + PR + +L+
Sbjct: 148 EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALK 207
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVES 247
++I A+ G TM+++D G++Y FG S G+ +G V + P+ +ES
Sbjct: 208 PFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIES 267
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---------NDAR-LGHHTEPNDVEPHP- 296
L+ IF+V + G+ + LSREG VY +WG +D R L +T+ +P P
Sbjct: 268 LQGIFIVSLSCGDSHSMALSREGHVY--AWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQ 325
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ L N +V I+ G + LAL G +YS G G+LG + EK
Sbjct: 326 KVVALMNKKIVAISCGETHTLALT---EGGHLYSFGGNTCGQLGQYVKELEK 374
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 52/330 (15%)
Query: 234 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG---HHTE 288
+G P ++ L+N + Q A G+ T + +G VY SWG A +LG
Sbjct: 6 EGYPFQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVY--SWGASACGQLGLASMKDL 63
Query: 289 PNDVEPHP------LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
P DVE +P ++ L+++ V+QIA G + +AL +YS G G G+LGH
Sbjct: 64 PTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALT---QDGKLYSWGGGGCGQLGHP 120
Query: 343 SRT----DEK------HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
+ DE P+LI L NL+ VA G H V +G + +WG G G
Sbjct: 121 DTSAMPKDEDGCPYQPKPKLI--VVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQ 178
Query: 393 LGHGNEEC----------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
LGH + + +P+ V AL K IH + GD T V+++ G++Y FG G
Sbjct: 179 LGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSC 238
Query: 443 ASLGHNAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG I+ + + + P+ + SL+ + +V +S +S H+ AL+ G
Sbjct: 239 GQLGFGNISQMPLDVDSCPFMPVPKKIESLQGI--FIVSLSCGDS-----HSMALSREGH 291
Query: 501 LYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+YA+G GQLG++ + R P+ D
Sbjct: 292 VYAWGEATYGQLGLDDI-----RDLPKNTD 316
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 162/364 (44%), Gaps = 54/364 (14%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
++ +G N GQLG P P +L +R IQ A G ++ G++YA G +
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4005
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 283
G+ GT V++P LVESL+++ + + A+ G LS +G V+++ G D +L
Sbjct: 4006 --GGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4063
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH + P L+ L I VV IA G + AC S V + G G G+LGHG
Sbjct: 4064 GHGNRDSYDRPK-LIEALSGIGVVDIACGSAH---SACITSQGHVLTWGKGRYGRLGHGD 4119
Query: 344 RTDEKHPR--------------------LIEQF-----------QLLNLQPVVVAAGAWH 372
D+ P+ L E+ L L + V G+
Sbjct: 4120 SEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQF 4179
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ + + G V TWG G Y LGHGN + PK V AL K I +ATG S+ G
Sbjct: 4180 SVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 4239
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+V+++G + LG + Q P+LV SL+ + +V++ I +AHT
Sbjct: 4240 EVFTWGDNDEGQLGDGTVTAIQ--------RPRLVQSLQ--GKHIVKV-----ICGSAHT 4284
Query: 493 FALT 496
AL+
Sbjct: 4285 LALS 4288
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 181/394 (45%), Gaps = 37/394 (9%)
Query: 133 LRFLLAGEACCRRENSQAIAGPGHSIA-----------VTSKGVVYSFGSNSSGQLGHGT 181
L +L + EN A A P +S + ++SK +V+ G N QLG
Sbjct: 2868 LEMMLQNASFLATENDSA-AEPSYSTSSNYADEQSSNEISSKVLVW--GLNDKEQLGGLK 2924
Query: 182 TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 241
+ P L ++ I + G+ ++S G++YA G+ + G G+ V +
Sbjct: 2925 GSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGR--LGLGHNNNVPT 2982
Query: 242 PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P+ V L V + A+ G L+ +G+V+++ G D +LGH +E LL
Sbjct: 2983 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVT-LEKPKLLE 3041
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
+L + IA G + A+ S +Y+ G G G+LGHG + P+L+ Q
Sbjct: 3042 SLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGH 3098
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ V + + ++G V +WG G +G LG G E SVP V+ LN V + +
Sbjct: 3099 RVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIE 3158
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G + +++ G+V+++G G+ LGH ++H TP + L+ ++V+
Sbjct: 3159 CGAQFSLALTKIGEVWTWGKGDYYRLGHGT------DQHVRKPTP--IQGLR--GKKVIH 3208
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+++ H A+T+SG+++A+G D GQ G
Sbjct: 3209 VAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG 3237
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H++A+T G V+S+G G+LGHG +P+ + SL+ RI A G+ +
Sbjct: 3001 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAA 3060
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSRE 269
I+ +G++Y +G +G +G T+L P+LV +L+ VVQ A G + T L+ E
Sbjct: 3061 ITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTALQGHRVVQVACGSRDAQTLCLTEE 3118
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+++ G+ +LG PH + L + VVQI G + LAL V+
Sbjct: 3119 GLVFSWGDGDFGKLGRGGSEGCSVPHQ-VERLNGVGVVQIECGAQFSLALT---KIGEVW 3174
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G +LGHG+ ++H R Q L + V+ VA GA H V G+V WG
Sbjct: 3175 TWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDN 3231
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+G G GN P +V L+ V VA G
Sbjct: 3232 DHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 166/348 (47%), Gaps = 39/348 (11%)
Query: 168 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
S SN+S QL G+ + I +++ Q A +++ +GQ+Y+ S
Sbjct: 506 SEASNASAQLLAGSVPR-YSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI-HSSCA 563
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLG 284
E +P+LVE L+ + V+Q A G A LS G VY++ G RLG
Sbjct: 564 E----------TVAPKLVEGLEGVSVIQIAAHCEGRHAMA-LSSAGEVYSWGAGEGGRLG 612
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
H + P + LE V I AG Y A++ S +++ G G G+LGHG+
Sbjct: 613 HGDTASKEVPTKI--ALEK-QVTAIYAGASYSAAVS---SVGELFTWGRGTYGRLGHGNS 666
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
D+ P ++ + + V + +G H+ V G + WG G +G LG+G+ +P
Sbjct: 667 DDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLP 726
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
++ ++ V I+ +G + +S DG +YS+G G LGH + H+NV P
Sbjct: 727 VQIEGVSSVARIY--SGSQFSVALSYDGTLYSWGKGHGGRLGHG------NSEHSNV--P 776
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+LV +L+ +++V +++ + AH ALT SG+LY +G D Q+
Sbjct: 777 KLVHALE--GKKIVDVAVGS-----AHCLALTSSGELYGWGRNDYQQI 817
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 21/281 (7%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GR-TMLISDAGQ 217
VT+ G +YS H + E P+ + L+G+ +IQ AA GR M +S AG+
Sbjct: 549 VTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGE 599
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
VY++G G +G +K V + +E K + + A G ++A +S G ++T+
Sbjct: 600 VYSWGAGEGGRLGHGDTASKEVPTKIALE--KQVTAIYA--GASYSAAVSSVGELFTWGR 655
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
G RLGH + P + L+ VV +A G ++A G+ +++ G G G
Sbjct: 656 GTYGRLGHGNSDDKFVPTQV-QALKAYKVVDVALGSGDAHSMAVTDGGL-LFAWGDGDFG 713
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
KLG+GS P IE + + +G+ + + DG + +WG G G LGHGN
Sbjct: 714 KLGNGSCNGSPLPVQIEGVSSV----ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN 769
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
E +VPK+V AL K + VA G ++ G++Y +G
Sbjct: 770 SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 36/300 (12%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
++Y F ++ + + G+ S +E ++ V Q A +++ G++Y+
Sbjct: 500 EMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI- 558
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
H + V P L+ LE + V+QIAA A+A +G VYS G G G
Sbjct: 559 --------HSSCAETVAPK-LVEGLEGVSVIQIAAHCEGRHAMALSSAG-EVYSWGAGEG 608
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LGHG ++ P I L Q + AGA ++A V G + TWG G YG LGHG
Sbjct: 609 GRLGHGDTASKEVPTKIA----LEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHG 664
Query: 397 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
N + + VP VQAL K + VA +GD + V++ G ++++G G+ LG+
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGN------- 717
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 513
G+ + + L Q + +S IY + + AL+ G LY++G G G+LG
Sbjct: 718 GSCNGSPLPVQ-----------IEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLG 766
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 18/237 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A++S G VYS+G+ G+LGHG T + P I + + I AGA + +S
Sbjct: 590 HAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIY--AGASYSAAVSSV 647
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+++ +G+ ++G +G K V P V++LK VV A+G+ ++ F
Sbjct: 648 GELFTWGRGTYGRLGHGNSDDKFV--PTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLF 705
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVG 332
+WG+ +LG+ PL +E + V +I +G + +AL+ + +YS G
Sbjct: 706 AWGDGDFGKLGN----GSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYDGT---LYSWG 758
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G GG+LGHG+ P+L+ + + V VA G+ H + G + +GWGR
Sbjct: 759 KGHGGRLGHGNSEHSNVPKLVHALE--GKKIVDVAVGSAHCLALTSSGEL--YGWGR 811
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 9/171 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RT 209
AG +S AV+S G ++++G + G+LGHG +++++ P +++L+ +++ A G+G +
Sbjct: 636 AGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHS 695
Query: 210 MLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
M ++D G ++A+G FG+ G G+ L + V S+ I+ G+ F+ LS
Sbjct: 696 MAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYS-----GSQFSVALSY 750
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+G +Y++ G+ RLGH + P L+ LE +V +A G + LAL
Sbjct: 751 DGTLYSWGKGHGGRLGHGNSEHSNVPK-LVHALEGKKIVDVAVGSAHCLAL 800
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 275 FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
F WG++ R LG P P L + +QIA G L A+ P G +Y+ G
Sbjct: 3947 FGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 4002
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G GG+LG G P L+E Q + ++ V V +G H + DG V +WG G G
Sbjct: 4003 YGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4062
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGHGN + PK+++AL+ + + +A G + ++ G V ++G G LGH D
Sbjct: 4063 LGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4122
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH--------------------- 491
+ + T T + V + SL + A
Sbjct: 4123 QLQPKRCVLRT----TIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQ 4178
Query: 492 -TFALTESGKLYAFGAGDKGQLG 513
+ ALT SG +Y +G GD +LG
Sbjct: 4179 FSVALTRSGSVYTWGKGDYHRLG 4201
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 259 GNFFTAVLSREG---RVYTFSWGN--DARLGHHTEPNDVEPHPLLG--------TLENIP 305
GN+ V ++ +++T W + G +E ++ L G T+E P
Sbjct: 473 GNYSAKVNAKANSAQKIFTLGWSSCSPEMYGFTSEASNASAQLLAGSVPRYSTATIELPP 532
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
+Q+ C ++ + +YS+ H S + P+L+E + +++ +
Sbjct: 533 SLQVRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIA 583
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
HA + G V +WG G G LGHG+ + VP + V AI+ G +
Sbjct: 584 AHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA--GASYS 641
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
VS G+++++G G LGH D P V +LK +VV ++L +
Sbjct: 642 AAVSSVGELFTWGRGTYGRLGHGNSDDK--------FVPTQVQALKAY--KVVDVALGSG 691
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
+AH+ A+T+ G L+A+G GD G+LG N + G+P V I+
Sbjct: 692 ---DAHSMAVTDGGLLFAWGDGDFGKLG-----NGSCNGSPLPVQIE 730
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A+T G V+++G +LGHGT + +P PI+ L+G ++I A GA
Sbjct: 3156 QIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALH 3215
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ ++D+GQV+A+G + G+ G T + P LV L +FV + A G+
Sbjct: 3216 CLAVTDSGQVFAWGDNDHGQQ--GSGNTVVNKKPNLVLGLDGVFVNRVACGS 3265
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 47/75 (62%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G S+A++ G +YS+G G+LGHG +E P+ + +L+G +I+ A G+ +
Sbjct: 740 SGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLA 799
Query: 212 ISDAGQVYAFGKDSF 226
++ +G++Y +G++ +
Sbjct: 800 LTSSGELYGWGRNDY 814
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 14/305 (4%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q+I+ G H+ V G +Y G+NS GQLG +++P + +L+ + I A G
Sbjct: 40 QSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDD 97
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ +SD GQV +G++ G+ + P++++ L + V+ G+ + L+
Sbjct: 98 HTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPS 324
R+GR+ FSWG++ +LG T + P L +L +P+V++A G + AL S
Sbjct: 158 RDGRL--FSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 215
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V+ G G+LG G++ ++ +P L+ + ++ +A G H A++ DG V
Sbjct: 216 ---VFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKH--IACGQDHTAMLTADGGVFL 270
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESA 443
+G G G LGHG+ E P+ V L V G + T V+ G +Y+FG G
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHG 330
Query: 444 SLGHN 448
LG +
Sbjct: 331 QLGQD 335
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 34/370 (9%)
Query: 167 YSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+ +GS+ GQLG G T + + + +L G R+ + G T ++ D G +Y G
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+S G+ K P V +L+ + + A G+ T +S G+V WG + R
Sbjct: 64 NSKGQLGQDRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQV--LGWGRNDRG 117
Query: 284 GHHTEPNDVEPHP---LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
D+E P +L L + V++ G + +AL ++S G G+LG
Sbjct: 118 QCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQLG 174
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G+ R E L + V VA G +H+ + G V WG G LG GN+E
Sbjct: 175 IGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKEN 234
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
++ P +++ + H+A G T +++ DG V+ FG G LGH + + N
Sbjct: 235 KAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS--------NYN 286
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNN 519
+ P+ V L + + Q++ HT L S G+LYAFG G GQLG + +
Sbjct: 287 EVNPRKVIDL--MGSDITQVTCGKH-----HTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339
Query: 520 QTERGNPERV 529
+ NP+RV
Sbjct: 340 CS---NPQRV 346
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 179/414 (43%), Gaps = 72/414 (17%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGA 206
+ G HS+A+T G ++S+G N+ GQLG GT + RP + SL+G+ +++ A G
Sbjct: 145 KVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGG 204
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ +G V+ +GK+ G+ G + K P L+ ++++ V A G TA+L
Sbjct: 205 FHSFALTISGSVFGWGKNDVGQLGLGNKENK--AYPTLLRNMRSQMVKHIACGQDHTAML 262
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G V+ F G++ +LGH + N+V P ++ L + Q+ G + L L + S
Sbjct: 263 TADGGVFLFGQGSEGQLGHGSNYNEVNPRKVI-DLMGSDITQVTCGKHHTLVL--EGSKG 319
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAV---VGQDGR 381
+Y+ G G+ G+LG +P+ + G W H++ GR
Sbjct: 320 RLYAFGQGIHGQLGQDEARSCSNPQRV--------------PGPWVPHSSTEKNSSSKGR 365
Query: 382 V--CTWGWGRYGCLGHGNEECESVP-----------------------------KVVQAL 410
V C + G + C + + L
Sbjct: 366 VVRCIYAGGHH-CFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXL 424
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
V HVA GD T VS+ V +G + G +A G N P+++ L
Sbjct: 425 ETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCG---LATGDIE---NKPRPRILRHL 478
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-ELVNNQTER 523
+ + V++ + H+ ALT G+L+++G GQLGI LV N T+R
Sbjct: 479 --ASYQFVKVCCG-----SLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDR 525
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 210
G H++AV+ +G V +G N GQ G T + E +PRP ++ L + ++ G+ +M
Sbjct: 95 GDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSM 154
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+++++G +++G+ G T P + SL+ + +V+ A G F + L+ G
Sbjct: 155 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 214
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V F WG + +LG + N P LL + + V IA G + L V
Sbjct: 215 SV--FGWGKNDVGQLGLGNKENKAYP-TLLRNMRSQMVKHIACGQDHTAMLTADG---GV 268
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGW 387
+ G G G+LGHGS +E +PR + L+ V G H V+ G GR+ +G
Sbjct: 269 FLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ 326
Query: 388 GRYGCLGHGNEECESVPKVV 407
G +G LG S P+ V
Sbjct: 327 GIHGQLGQDEARSCSNPQRV 346
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 210
G H++AV+ + V +G N GQ G T + E +PRP +R L + ++ G+ +M
Sbjct: 435 GDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSM 494
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+++++G +++G+ G T P + SL+ + +V+ A G F + L+ G
Sbjct: 495 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 554
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V F WG + +LG + N P LL + + V IA G + L V
Sbjct: 555 SV--FGWGKNDVGQLGLGNKENKSYP-TLLRNMRSQMVKHIACGQDHTAMLTADG---GV 608
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGW 387
+ G G G+LGHGS +E +PR + L+ V G H V+ G GR+ +G
Sbjct: 609 FLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ 666
Query: 388 GRYGCLGHGNEECESVPKVV 407
G +G LG S P+ V
Sbjct: 667 GIHGQLGQDEARSCSNPQRV 686
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 163/408 (39%), Gaps = 49/408 (12%)
Query: 148 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPI------------RSL 194
+Q G H++ + SKG +Y+FG GQLG P+ + S
Sbjct: 302 TQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSS 361
Query: 195 QGIRIIQAAAGAGRTML-----ISDAGQVYAFGKDS----FGEAEYGVQGTKLVTSPQLV 245
R+++ G +D Q+ +D F +
Sbjct: 362 SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXX 421
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLE 302
L+ + + A G+ T +S RV WG + R D+E P +L L
Sbjct: 422 XXLETVVIKHVACGDDHTLAVS--DRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLA 479
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+ V++ G + +AL ++S G G+LG G+ R E L +
Sbjct: 480 SYQFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVP 536
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
V VA G +H+ + G V WG G LG GN+E +S P +++ + H+A G
Sbjct: 537 LVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQ 596
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T +++ DG V+ FG G LGH + + N + P+ V L + + Q++
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGS--------NYNEVNPRKVIDL--MGSDITQVTC 646
Query: 483 TNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT L S G+LYAFG G GQLG + + + NP+RV
Sbjct: 647 GKH-----HTLVLEGSKGRLYAFGQGIHGQLGQDEARSCS---NPQRV 686
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 25/373 (6%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+S G NS G+LGHG T I++LQ IIQ AG T++++ G+V+ G +
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYND 623
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
G+ G GT V+ + + + A G T ++S +GRV T + +LG
Sbjct: 624 NGQCGQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLG 681
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGS 343
H ++ P ++ +LEN V ++ Y Y LAC+ + +Y+ G G+LGH
Sbjct: 682 HGNTTSESVPK-IIRSLENKIVRLVSCSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHND 739
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
D K P+ +E L + Q V VA G +H VV G+ +G YG LG E +
Sbjct: 740 SIDRKIPQFVE--ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLA 797
Query: 404 PKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV- 461
P V+ L + + + G Y T + +++FG + LG + + +N+
Sbjct: 798 PVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG---LGRSNASSTSNLQ 854
Query: 462 LTPQLVTSLKQVNE----RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
L Q ++ + ++E +V+I+ Y HT A++++G +Y FG + GQLG
Sbjct: 855 LQQQRFSNARLIDELEGKDIVRIAC--GCY---HTIAVSDNGVMYVFGRNNHGQLG---T 906
Query: 518 NNQTERGNPERVD 530
+ TER P +D
Sbjct: 907 GDTTERVYPFPID 919
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 22/297 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+ A G H+I V++ G V + G N GQLGHG T E P+ IRSL+ + +
Sbjct: 651 AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYY 710
Query: 208 RTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
T+L + G +Y FG++ +G+ + + + PQ VE+L + +V A G + T
Sbjct: 711 HTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTM 768
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
V++ G+ + F + +LG T N + P + G LE ++I GY + +AL S
Sbjct: 769 VVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC---S 825
Query: 325 GMAVYSVGCGLGGKLGHG----SRTDE--------KHPRLIEQFQLLNLQPVVVAAGAWH 372
G +++ G G+LG G S T + RLI++ + ++ V +A G +H
Sbjct: 826 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDI--VRIACGCYH 883
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
V +G + +G +G LG G+ P + + VA G Y T V++
Sbjct: 884 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)
Query: 209 TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T+ D G+ V++ G++S+GE +G ++ S + +++L+ ++Q GN T VL
Sbjct: 553 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 610
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G+V+T + ++ + G + L IP + + + C+ + +
Sbjct: 611 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 662
Query: 327 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG- 380
V + G G+LGHG+ T E P++I + N +V+ +H + +DG
Sbjct: 663 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 720
Query: 381 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+ T+G YG LGH + +P+ V+AL+D + + VA G Y T VV+ G ++FG
Sbjct: 721 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFG 780
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ LG + + N L P ++ ER + + Y HT AL
Sbjct: 781 KNDYGQLGIDTM--------ENQLAP---VQVRGGLERQECLEIRCGYY---HTIALCSG 826
Query: 499 GKLYAFGAGDKGQLGI 514
L+AFG D GQLG+
Sbjct: 827 AHLFAFGRNDYGQLGL 842
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 29/282 (10%)
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
A + N T EG +S G ++ LGH + + + L+ ++QI AG
Sbjct: 546 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGH-GDTASRKSFERIQALQQKEIIQIGAGN 604
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ + L V++ G G+ G G H I + + Q G H
Sbjct: 605 EHTVVLTADGK---VFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQ-AHAYNGCEHT 660
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG- 432
+V DGRV T G+ G LGHGN ESVPK++++L + V+ Y T + EDG
Sbjct: 661 ILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGN 720
Query: 433 --DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
++Y+FG + LGHN D + PQ V +L ++++V ++
Sbjct: 721 LQNLYTFGRNDYGQLGHNDSIDRK--------IPQFVEALS--DQQIVSVACG-----QY 765
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTE----RGNPER 528
HT +T SGK +AFG D GQLGI+ + NQ RG ER
Sbjct: 766 HTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLER 807
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 198
EA ++ G H++ VT+ G ++FG N GQLG T E + P +R L+
Sbjct: 750 EALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQE 809
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ----------LVESL 248
++ G T+ + ++AFG++ +G+ G ++ Q L++ L
Sbjct: 810 CLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDEL 869
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ +V+ A G + T +S G +Y F N +LG V P P + V
Sbjct: 870 EGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP-IDDFVGKRVAL 928
Query: 309 IAAGYCYLLAL 319
+AAG+ + + L
Sbjct: 929 VAAGFYHTVVL 939
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+IAV+ GV+Y FG N+ GQLG G T E P PI G R+ AAG T+++
Sbjct: 880 GCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVL 939
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSR 268
+ + +DS E E + +SP Q+ L + ++QA + + L++
Sbjct: 940 TGGKEDDKNERDSGNEKE---ELAACFSSPRLQMYMILATLRILQANLSQMLRSGLAK 994
>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
Length = 1056
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 178/382 (46%), Gaps = 45/382 (11%)
Query: 160 VTSKGVVYSFG---SNSSGQLGHGTTE----EEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ S G VY +G ++++ GH T+ + P+P+ S + + Q G+ L
Sbjct: 213 IESLGDVYVWGEVWTDAAPSDGHTTSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHIALT 272
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G+V+ +G++ G +G ++ P+LVES+ V + G F T +S G +
Sbjct: 273 TRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVESISVTIVDFISCGEFHTCAISASGDL 330
Query: 273 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
F+WG+ + LG+ T + P + G LE + V+ +A G + + S +
Sbjct: 331 --FNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHSALIT---STGRL 385
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------- 378
Y+ G G G LGHG+R +P+ +E L + + VA G WH+A + +
Sbjct: 386 YTFGDGTFGALGHGNRESSAYPKEVEA--LNGFRTIKVACGVWHSAAIVEATVQTGMNMV 443
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
++ TWG G LG G++E +P VQAL + +A G T ++ G VY+ G
Sbjct: 444 SKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATSGHVYTMG 503
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
++ LG N +DG+ P LV K +E V +IS AH LT
Sbjct: 504 SSDNGQLG-NPKSDGK--------QPCLVKD-KLAHELVEEISCGA-----AHVAVLTSR 548
Query: 499 GKLYAFGAGDKGQLGIELVNNQ 520
++Y +G G G+LG +N++
Sbjct: 549 SEVYTWGMGANGRLGHGDLNDK 570
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 22/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ A+++ G ++++G S +G LG+ T W P+ + L+G++++ A G+ +
Sbjct: 317 GEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHS 376
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LI+ G++Y FG +FG +G + + P+ VE+L ++ A G + +A +
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAY--PKEVEALNGFRTIKVACGVWHSAAIVEA 434
Query: 269 ---------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
++YT+ G+ RLG + + P + LE+ Q+A G +AL
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEH-NFHQLACGQNMTVAL 493
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
A SG VY++G G+LG+ ++D K P L++ +L + ++ GA H AV+
Sbjct: 494 AT--SGH-VYTMGSSDNGQLGN-PKSDGKQPCLVKD-KLAHELVEEISCGAAHVAVLTSR 548
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ + P +V+AL D ++ G ++TT +
Sbjct: 549 SEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCI 597
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 30/281 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS +TS G +Y+FG + G LGHG E P+ + +L G R I+ A G + I
Sbjct: 372 GSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAI 431
Query: 213 SDA----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+A ++Y +G G + +L+ P V++L Q A G
Sbjct: 432 VEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLI--PTCVQALLEHNFHQLACGQNM 489
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G VYT ++ +LG + + + +P + L + V +I+ G ++ L
Sbjct: 490 TVALATSGHVYTMGSSDNGQLG-NPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLT-- 546
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S VY+ G G G+LGHG D+K P ++E + +++ + + H V G
Sbjct: 547 -SRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSG 605
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 409
D VCT + R+ C G C S KV++A
Sbjct: 606 ADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKA 646
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 147/341 (43%), Gaps = 37/341 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q + G H T +G V+++G G+LGHGT + RP+ + S+ + + G
Sbjct: 260 NQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEF 319
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQG------TKLVTSPQLVESLKNIFVVQAAIGNF 261
T IS +G ++ +G S+ G K V+ P +E L+ +FV A G++
Sbjct: 320 HTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGP--LEGLQVLFV---ACGSW 374
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-- 319
+A+++ GR+YTF G LGH + P + L +++A G + A+
Sbjct: 375 HSALITSTGRLYTFGDGTFGALGHGNRESSAYPKE-VEALNGFRTIKVACGVWHSAAIVE 433
Query: 320 ACQPSGM-----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
A +GM +Y+ G G +LG G + P ++ N +A G
Sbjct: 434 ATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQ--LACGQNMTV 491
Query: 375 VVGQDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
+ G V T G G LG+ G + C K+ L + ++ G V++
Sbjct: 492 ALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVE----EISCGAAHVAVLTS 547
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+VY++G G + LGH + D + P +V +LK
Sbjct: 548 RSEVYTWGMGANGRLGHGDLNDKKA--------PTIVEALK 580
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 22/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 429
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG +G + K V+ P+ VESLK + V+AA G + TA +
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEV 487
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + Q+A G+ +
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTV 547
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + VY++G + G+LG + D K P +E ++L +A GA+H AV+
Sbjct: 548 ALTTKGH---VYTMGSPVYGQLGI-PQADGKLPICVE-WKLSESFVEEIACGAYHVAVLT 602
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V+AL D +A G T +
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAI 653
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 150/345 (43%), Gaps = 45/345 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+++++G+++ G +GV V P+L+E+
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSD--VLHPKLIEA 358
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L N + A G + T ++ G +YT WGN LGH + + P + G LE
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYT--WGNGTYNCGLLGHGNQVSHWVPKRVNGPLEG 416
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 417 IHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGLRT 471
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E + VP V AL
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV-ALV 530
Query: 412 DVKA--IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
+VK VA G T ++ G VY+ G LG PQ
Sbjct: 531 NVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG----------------IPQADGK 574
Query: 470 LKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
L E + S I A H LT ++Y +G G G+LG
Sbjct: 575 LPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 41/291 (14%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G A+++++G + FSWG +A RLGH + + + P L+
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEI--FSWGEEAGGRLGHGVDSDVLHPK-LIE 357
Query: 300 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
L N + +A G + A+ G Y+ CGL LGHG++ P+ +
Sbjct: 358 ALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYN--CGL---LGHGNQVSHWVPKRVNG 412
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
L + ++ G WH AVV G++ T+G G +G LGHG+ + S+P+ V++L ++
Sbjct: 413 -PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRT 471
Query: 416 IHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
+ A G + T V E G ++++G G+ LGH G++ A L
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAK-LV 523
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P V +L V Q++ +S+ T ALT G +Y G+ GQLGI
Sbjct: 524 PTRV-ALVNVKPNFCQVACGHSL-----TVALTTKGHVYTMGSPVYGQLGI 568
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 425 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAV 484
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV + + ++K F Q A G+
Sbjct: 485 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNF-CQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ +G VYT +LG + + P + L V +IA G ++ L
Sbjct: 544 SLTVALTTKGHVYTMGSPVYGQLG-IPQADGKLPICVEWKLSESFVEEIACGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + +++ + AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGVDQSMCS 668
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 14/172 (8%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G + D P+ +E +L++Q + A G HAA+V + G + +WG G LGHG +
Sbjct: 293 GVKMDSLFPKSLESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV 350
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
PK+++AL++ VA G+Y T V+ GD+Y++G G +N G GN+ ++
Sbjct: 351 LHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGT-----YNCGLLGHGNQVSHW 405
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ ++ +S + W HT +T +G+L+ FG G G LG
Sbjct: 406 VPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGTFGALG 450
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE------EEWRPRPIRSLQGIRIIQA 202
Q G ++A+T+KG VY+ GS GQLG + EW+ L + +
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWK------LSESFVEEI 591
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A GA +++ +VY +GK + G +G T +P LVE+LK+ V A G F
Sbjct: 592 ACGAYHVAVLTSRTEVYTWGKGANGRLGHG--DTDDRNTPTLVEALKDKDVKSIACGTNF 649
Query: 263 TAVL 266
TA +
Sbjct: 650 TAAI 653
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT + P+ + S + + + G ML++ G+ +++G+++ G +G + V
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETD--V 348
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPH 295
+ P+L+++ K + V A G + + ++ G +YT WG+ A+ LGH +E + P
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYT--WGDGAKSSGLLGHRSEASHWIPK 406
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+ G +E + V ++ G + + S +++ G G G LGHG R+ PR +E
Sbjct: 407 KVCGLMEGLRVSHVSCGPWHTALIT---SAGRLFTFGDGTFGALGHGDRSGCITPREVET 463
Query: 356 FQLLNLQPVVVAAGAWHAAVV-----GQDGR--------VCTWGWGRYGCLGHGNEECES 402
F L+ + VA G WH A V G D R + TWG G G LGHG+ +
Sbjct: 464 FN--GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL 521
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P+ + AL D VA T ++ G VY+ G LG AN +
Sbjct: 522 APQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL---------ANGM 572
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+P V V+ V +IS + H LT ++Y +G G+ GQLG N+
Sbjct: 573 SPICVEDY-LVDSTVEEISCGSH-----HVAVLTSRTEVYTWGKGENGQLGHGDCENKC- 625
Query: 523 RGNPERVDI 531
P VDI
Sbjct: 626 --TPTLVDI 632
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 36/362 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT +G +S+G + G+LGHG + P+ I++ +G+ + A G + +
Sbjct: 316 GNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAV 375
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESL-KNIFVVQAAIGNFFTAVLSR 268
+ +G +Y +G G G+ G + S P+ V L + + V + G + TA+++
Sbjct: 376 TSSGDLYTWGD---GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITS 432
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 326
GR++TF G LGH + P + T + +++A G + A+ SG+
Sbjct: 433 AGRLFTFGDGTFGALGHGDRSGCITPRE-VETFNGLKTLKVACGVWHTAAVVELMSGLDS 491
Query: 327 --------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVV 376
+++ G G GKLGHG + PRL Q L++ VA +
Sbjct: 492 RPSDAPSGTLFTWGDGDKGKLGHG----DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
GRV T G YG LG S V L D ++ G + V++ +VY+
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFA 494
+G GE+ LGH N TP LV L KQV V + + +I H +A
Sbjct: 608 WGKGENGQLGHGDC--------ENKCTPTLVDILRDKQVKRIVCGSNFSAAIC--VHNWA 657
Query: 495 LT 496
L+
Sbjct: 658 LS 659
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ +TS G +++FG + G LGHG PR + + G++ ++ A G
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVW 477
Query: 208 RTMLI-----------SDA--GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
T + SDA G ++ +G G+ +G +L +PQ + +L +
Sbjct: 478 HTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL--APQCITALVDKSFS 535
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ A T L+ GRVYT +LG N + P + L + V +I+ G
Sbjct: 536 EVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL-ANGMSPICVEDYLVDSTVEEISCGSH 594
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAG 369
++ L S VY+ G G G+LGHG ++ P L++ + ++ +V AA
Sbjct: 595 HVAVLT---SRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651
Query: 370 AWHAAVVGQDGRVCTWGWGRYGC 392
H + D +C +GC
Sbjct: 652 CVHNWALSADNSIC------FGC 668
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + SG LGHG W P+ + LQG+ I + G T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHT 427
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ AG+++ FG +FG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEV 485
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ G+++T+ G+ RLGH + + P + L Q+A G+ +
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP-TCVAALVEPNFCQVACGHSLTV 544
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + +Y++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 545 ALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKSFVEELACGAYHVAVLT 599
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S+ + + A G L++ G+V+++G++ G +G G P+L+++
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHG--GDSDAHHPKLIDA 356
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L N+ + A G + T ++ G +YT WG N LGH + + P + G L+
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYT--WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ + I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 415 LHISSISCGPWHT---ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES--LKGLRT 469
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALV 529
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G +Y+ G LG N ADG+ P V
Sbjct: 530 EPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NPQADGK--------LPARV---- 576
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + S + A H LT ++Y +G G G+LG
Sbjct: 577 ---EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 616
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 147/307 (47%), Gaps = 38/307 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 299
P+ +ES+ + V A GN A+++++G V FSWG + RLGH + + P L+
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L N+ + +A G + A+ + + G G LGHG P+ + L
Sbjct: 356 ALSNLNIELVACGEYHTCAVTLS-GDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-PLQ 413
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
L ++ G WH A+V G++ T+G G +G LGHG+ + S+P+ V++L ++ + A
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAA 473
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ A L P V
Sbjct: 474 CGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTCV 525
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N Q + P
Sbjct: 526 AALVEPN--FCQVACGHSL-----TVALTNSGHIYTMGSPVYGQLG----NPQADGKLPA 574
Query: 528 RVDIDLS 534
RV+ LS
Sbjct: 575 RVEGKLS 581
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 423 GPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAV 482
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + +LV P V +L Q A G+
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGH 540
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G +YT +LG + + + P + G L V ++A G ++ L
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLT 599
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHGS D P L+E + ++ + AA H V
Sbjct: 600 ---SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 656
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 657 SGVDQSMCS 665
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
S+ D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 460
PK++ AL+++ VA G+Y T V+ GD+Y++G G S LGH G+ H
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-----GKDVSH-- 402
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ VT Q + IS + W HT +T +GKL+ FG G G LG
Sbjct: 403 -WVPKRVTGPLQ----GLHISSISCGPW--HTALVTSAGKLFTFGDGTFGVLG 448
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 188/394 (47%), Gaps = 37/394 (9%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLQG 196
G + C N AG S+A+ + G ++S+G N +GQLG G + + P + +L
Sbjct: 975 GFSGCGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP 1034
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 255
I AAG + ++ G V+++G +S G+ G GT + PQ + ++ N+ +
Sbjct: 1035 AAKI--AAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI- 1091
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G + ++R+G ++++ + +LG + P + + N V IAAG Y
Sbjct: 1092 -ACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV-NAISN--VAAIAAGEYY 1147
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
LAL S V+S G G+LG G D P+ +E + +AAG H+
Sbjct: 1148 SLALTRDGS---VWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNV----AAIAAGEDHSLA 1200
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ +DG V +WG G LG + + + P+ V ++++KAI A G+ +F +SE+G +
Sbjct: 1201 LTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGLAW 1258
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G LG G AN TPQ V + V + L+ Y H+ AL
Sbjct: 1259 AWGYNYDGQLGI-----GTSGSLANENTPQKVKVISNV------VGLSGGNY---HSLAL 1304
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
TE G L+A+G D GQ+G + +R NP +V
Sbjct: 1305 TEDGALWAWGDNDDGQIG----STGGDRKNPVQV 1334
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 194/391 (49%), Gaps = 43/391 (10%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQG 196
G + C N AG G S+A+ + G V+S+G+N SGQLG G E + + P + +L
Sbjct: 486 GFSGCGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL 545
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 255
I AAG G + ++ G V+++G++S G+ G GT + PQ + ++ N+ +
Sbjct: 546 AASI--AAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAI- 602
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G + L+R+G +++ + +LG + P + L N VV +AAG +
Sbjct: 603 -ACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV-NALSN--VVAMAAGDRH 658
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
LAL S ++S G G+LG G PR + + V +AAG H+
Sbjct: 659 SLALTLDGS---LWSWGDNTYGQLGLGDNDHRNTPRKVNAISNV----VAIAAGYRHSLA 711
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ +DG V +WG G LG G+ + + P+ V ++++KAI A G+ + +SE+G V+
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISEEGLVW 769
Query: 436 SFGCGESASLG---HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++G S LG H ++AD TPQ V + VV +S +S H+
Sbjct: 770 AWGYNCSGQLGIGTHGSLADEN--------TPQKVIVIS----NVVGLSAGSS-----HS 812
Query: 493 FALTESGKLYAFGAGDKGQL----GIELVNN 519
ALTE G L+A+G + GQ+ IE ++N
Sbjct: 813 IALTEDGALWAWGNNEAGQIAAEEAIEYIDN 843
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 28/315 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+A+ S G ++++G N GQLG G + P L + I A G +
Sbjct: 124 AGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAI--AGGDYHALA 181
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ +G+V+A G++ G + G G +P V L N+ V A G FF+ L +G
Sbjct: 182 ATQSGEVWAMGRNDHG--QLGFTGDH-ADAPVQVAGLSNVKSV--AAGEFFSLALKNDGT 236
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WGN+ A+LG V + L NI IAAG + +ALA S V+
Sbjct: 237 VW--AWGNNESAQLGTGIAGEAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGS---VW 289
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G K P + + +A+G +H+ + DG + WG
Sbjct: 290 AWGANGSGQLGFGDFETPKAPGRVSSLADV----TAIASGWFHSLALTSDGVLWAWGNNG 345
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG +S+P V +++ A+ A G + ++ DG V+S+G LG +
Sbjct: 346 DGRLGTDATSDQSLPAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVES 403
Query: 450 IADGQGNRHANVLTP 464
+ A+VLTP
Sbjct: 404 LT------PASVLTP 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 34/363 (9%)
Query: 172 NSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 231
+ +G G + ++ +P S G AAG ++ + G ++++G + G+
Sbjct: 956 DGTGDFCDGCPGDFFKSQPGFSGCGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGL 1015
Query: 232 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTE 288
G+ + V +P V++L + A G+ L+ +G V+++ + +D +LG T
Sbjct: 1016 GLGQSVNVFTPTKVDALPP--AAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTY 1073
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
P + + N V IA G + LA+A S ++S G G+LG G +
Sbjct: 1074 STKNRPQKI-NAISN--VAAIACGGSHSLAVARDGS---LWSWGYNYYGQLGLGDNYSKT 1127
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
P+ + + +AAG +++ + +DG V +WG G LG G+ E + P+ V+
Sbjct: 1128 TPQKVNAISNV----AAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE 1183
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L++V AI A G+ + ++ DG V+S+G LG D +R+ TPQ VT
Sbjct: 1184 VLSNVAAI--AAGEDHSLALTRDGSVWSWGRNSRGQLG----LDDNDDRN----TPQPVT 1233
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 528
++ + N+H+FA++E G +A+G GQLGI + P++
Sbjct: 1234 TISNIKAIAAG---------NSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQK 1284
Query: 529 VDI 531
V +
Sbjct: 1285 VKV 1287
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 159/363 (43%), Gaps = 41/363 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLQGIRIIQAAAGAGRTMLIS 213
HS+A+ G V+ +G N QLG G P P+ S I+ AAG ++ ++
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRLFSLALA 133
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G ++A+G + +G+ G +L +P L ++ + A G++ ++ G V+
Sbjct: 134 SDGSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDVAAI--AGGDYHALAATQSGEVW 189
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ +LG + D P + G L N V +AAG + LAL + V++ G
Sbjct: 190 AMGRNDHGQLGFTGDHADA-PVQVAG-LSN--VKSVAAGEFFSLALKNDGT---VWAWGN 242
Query: 334 GLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
+LG G + P I + +AAG HA + +DG V WG G
Sbjct: 243 NESAQLGTGIAGEAVATPAPIAVLSNI----TAIAAGRRHAMALAEDGSVWAWGANGSGQ 298
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG G+ E P V +L DV AI A+G + + ++ DG ++++G LG +A +D
Sbjct: 299 LGFGDFETPKAPGRVSSLADVTAI--ASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSD 356
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
P V+S+ +S H+ A+ G ++++G GQL
Sbjct: 357 QS--------LPAQVSSISNA------VSFAGG---QRHSLAIAADGSVWSWGGNAYGQL 399
Query: 513 GIE 515
G+E
Sbjct: 400 GVE 402
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 36/331 (10%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
AAG G ++ + G V+++G + G+ G+ V +P V++L A G
Sbjct: 498 AAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGGH 555
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHP-LLGTLENIPVVQIAAGYCYLLA 318
L+ +G V+ SWG ++ E P + + N V IA G + LA
Sbjct: 556 ALALASDGSVW--SWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAIACGGSHSLA 611
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA S +S G G+LG G + PR + + V +AAG H+ +
Sbjct: 612 LARDGS---FWSWGYNYYGQLGLGDNVSKTTPRKVNALSNV----VAMAAGDRHSLALTL 664
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
DG + +WG YG LG G+ + + P+ V A+++V AI A G + ++ DG V+S+G
Sbjct: 665 DGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAI--AAGYRHSLALTRDGSVWSWG 722
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LG + D N N TPQ VT++ + V N ++ A++E
Sbjct: 723 NNTRGQLG---LGD---NDDRN--TPQPVTTISNIKAIAVG---------NNYSIAISEE 765
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G ++A+G GQLGI + + P++V
Sbjct: 766 GLVWAWGYNCSGQLGIGTHGSLADENTPQKV 796
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 24/269 (8%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
N AIA G HS+AV G ++S+G N GQLG G + P+ + ++ + I AAG
Sbjct: 1087 NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAI--AAG 1144
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ ++ G V+++G +S G+ G+ + +PQ VE L N+ + A G +
Sbjct: 1145 EYYSLALTRDGSVWSWGDNSDGQ--LGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLA 1200
Query: 266 LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+R+G V+ SWG ++R LG + P P+ T+ NI IAAG + A++ +
Sbjct: 1201 LTRDGSVW--SWGRNSRGQLGLDDNDDRNTPQPVT-TISNIKA--IAAGNSHSFAISEE- 1254
Query: 324 SGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
G+A ++ G G+LG GS +E P+ ++ + V ++ G +H+ + +DG
Sbjct: 1255 -GLA-WAWGYNYDGQLGIGTSGSLANENTPQKVKVISNV----VGLSGGNYHSLALTEDG 1308
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+ WG G +G + ++ +V Q+
Sbjct: 1309 ALWAWGDNDDGQIGSTGGDRKNPVQVFQS 1337
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 168/397 (42%), Gaps = 54/397 (13%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL---QGIRIIQAAAGAGRTML- 211
HS+A+ + G V+S+G N+ GQLG + P+ +L + + G G +
Sbjct: 378 HSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIW 437
Query: 212 ------------------ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
+S+ GQ G D G+ G G P +
Sbjct: 438 DDDDDGDGFLDESDNCPCVSNPGQEDEDG-DGTGDFCDGCPGDFFKIQPGFSGCGNPNPM 496
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAG 312
V A G F+ L +G V+ SWGN+ + + ++ +P+ IAAG
Sbjct: 497 VAAGGG--FSLALKTDGSVW--SWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAG 552
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ LALA S + G G G+ + E P+ I + +A G H
Sbjct: 553 GGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV----AAIACGGSH 608
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ + +DG +WG+ YG LG G+ ++ P+ V AL++V A+ A GD + ++ DG
Sbjct: 609 SLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSNVVAM--AAGDRHSLALTLDG 666
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++S+G LG + D N H N TP+ V ++ VV I+ H+
Sbjct: 667 SLWSWGDNTYGQLG---LGD---NDHRN--TPRKVNAIS----NVVAIAAGYR-----HS 709
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
ALT G ++++G +GQLG+ + +R P+ V
Sbjct: 710 LALTRDGSVWSWGNNTRGQLGL---GDNDDRNTPQPV 743
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 114/223 (51%), Gaps = 17/223 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+T G V+S+G NS GQLG G E+ P+ + L + I AAG ++
Sbjct: 1143 AGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLA 1200
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G V+++G++S G + G+ +PQ V ++ NI + A GN + +S EG
Sbjct: 1201 LTRDGSVWSWGRNSRG--QLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGL 1256
Query: 272 VYTFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+ + + D +LG T N+ P + + N VV ++ G + LAL A+
Sbjct: 1257 AWAWGYNYDGQLGIGTSGSLANENTPQKVK-VISN--VVGLSGGNYHSLALT---EDGAL 1310
Query: 329 YSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGA 370
++ G G++G + D K+P ++ + ++ +L V A GA
Sbjct: 1311 WAWGDNDDGQIGS-TGGDRKNPVQVFQSSEVFHLYLDVDADGA 1352
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 150 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIAG H++A T G V++ G N GQLG T + P + L ++ + AAG
Sbjct: 171 AIAGGDYHALAATQSGEVWAMGRNDHGQLGF-TGDHADAPVQVAGLSNVKSV--AAGEFF 227
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + + G V+A+G + + G+ G + V +P + L NI + A G L+
Sbjct: 228 SLALKNDGTVWAWGNNESAQLGTGIAG-EAVATPAPIAVLSNITAI--AAGRRHAMALAE 284
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMA 327
+G V+ + +LG D E G + ++ V IA+G+ + LAL S
Sbjct: 285 DGSVWAWGANGSGQLGF----GDFETPKAPGRVSSLADVTAIASGWFHSLALT---SDGV 337
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+++ G G+LG + +D+ P + V A G H+ + DG V +WG
Sbjct: 338 LWAWGNNGDGRLGTDATSDQSLPAQVSSIS----NAVSFAGGQRHSLAIAADGSVWSWGG 393
Query: 388 GRYGCLG 394
YG LG
Sbjct: 394 NAYGQLG 400
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 39/317 (12%)
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G V+ +G++ + + G +L +P+ + NI V A G F+ L+
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNI--VSVAAGRLFSLALA 133
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+G ++ +WG + +LG N + P G + V IA G + ALA SG
Sbjct: 134 SDGSLW--AWGGNYYGQLGMGDNDNRLTPSKTPGLSD---VAAIAGGDYH--ALAATQSG 186
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+++G G+LG T + ++ L N++ V AAG + + + DG V W
Sbjct: 187 -EVWAMGRNDHGQLGF---TGDHADAPVQVAGLSNVKSV--AAGEFFSLALKNDGTVWAW 240
Query: 386 GWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G LG G E + P + L+++ AI A G ++EDG V+++G S
Sbjct: 241 GNNESAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAEDGSVWAWGANGSGQ 298
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG + P V+SL V ++ + + H+ ALT G L+A+
Sbjct: 299 LGFGDFETPK--------APGRVSSLADV------TAIASGWF---HSLALTSDGVLWAW 341
Query: 505 GAGDKGQLGIELVNNQT 521
G G+LG + ++Q+
Sbjct: 342 GNNGDGRLGTDATSDQS 358
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
N +P+V A+ H+ + DG V WG Y LG G++ P+ ++++ + VA
Sbjct: 67 NAEPMV-ASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSNI--VSVA 123
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G + ++ DG ++++G LG + N LTP L V
Sbjct: 124 AGRLFSLALASDGSLWAWGGNYYGQLGM--------GDNDNRLTPSKTPGLSDV------ 169
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
++ Y H A T+SG+++A G D GQLG
Sbjct: 170 AAIAGGDY---HALAATQSGEVWAMGRNDHGQLGF 201
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 245
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 246 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 303
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG N P + LE + Q+A G + LA++ G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSA--DG 360
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +DG V T+
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTKDGHVYTF 418
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478
Query: 446 GHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H N V P LVT L+ N R + +S W A
Sbjct: 479 GLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 515
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 284 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 343
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 344 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 401
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+++G VYTF G D +G +H P + L + + +A
Sbjct: 402 GTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDVAV 453
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + LALA S VY+ G G+LG G + P L+ Q N++ ++AG
Sbjct: 454 GAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAGRC 508
Query: 372 HAA 374
H+A
Sbjct: 509 HSA 511
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 243
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 244 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 301
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 302 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 357
Query: 378 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V +G G YG LG GN +S P+ V L + VA G + +++DG VY+
Sbjct: 358 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 417
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 418 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 462
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+G +YA+G+ +GQLG+ N+ E
Sbjct: 463 STGDVYAWGSNSEGQLGLGHTNHVRE 488
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWG 386
V + G G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 203 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 262
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 263 DGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL- 321
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFG 505
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 322 ------GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFG 367
Query: 506 AGDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ N T + +P++VD+
Sbjct: 368 DGDYGKLGL---GNSTAKSSPQKVDV 390
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 25/373 (6%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+S G NS G+LGHG T I++LQ IIQ AG T++++ G+V+ G +
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYND 434
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
G+ G GT V+ + + + A G T ++S +GRV T + +LG
Sbjct: 435 NGQCGQG--GTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLG 492
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGS 343
H ++ P ++ +LEN V ++ Y Y LAC+ + +Y+ G G+LGH
Sbjct: 493 HGNTTSESVP-KIIRSLENKIVRLVSCSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHND 550
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
D K P+ +E L + Q V VA G +H VV G+ +G YG LG E +
Sbjct: 551 SIDRKIPQFVE--ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLA 608
Query: 404 PKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV- 461
P V+ L + + + G Y T + +++FG + LG + + +N+
Sbjct: 609 PVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG---LGRSNASSTSNLQ 665
Query: 462 LTPQLVTSLKQVNE----RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
L Q ++ + ++E +V+I+ Y HT A++++G +Y FG + GQLG
Sbjct: 666 LQQQRFSNARLIDELEGKDIVRIAC--GCY---HTIAVSDNGVMYVFGRNNHGQLG---T 717
Query: 518 NNQTERGNPERVD 530
+ TER P +D
Sbjct: 718 GDTTERVYPFPID 730
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 22/297 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+ A G H+I V++ G V + G N GQLGHG T E P+ IRSL+ + +
Sbjct: 462 AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYY 521
Query: 208 RTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
T+L + G +Y FG++ +G+ + + + PQ VE+L + +V A G + T
Sbjct: 522 HTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTM 579
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
V++ G+ + F + +LG T N + P + G LE ++I GY + +AL S
Sbjct: 580 VVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC---S 636
Query: 325 GMAVYSVGCGLGGKLGHG----SRTDE--------KHPRLIEQFQLLNLQPVVVAAGAWH 372
G +++ G G+LG G S T + RLI++ + ++ V +A G +H
Sbjct: 637 GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDI--VRIACGCYH 694
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
V +G + +G +G LG G+ P + + VA G Y T V++
Sbjct: 695 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)
Query: 209 TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T+ D G+ V++ G++S+GE +G ++ S + +++L+ ++Q GN T VL
Sbjct: 364 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 421
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G+V+T + ++ + G + L IP + + + C+ + +
Sbjct: 422 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 473
Query: 327 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG- 380
V + G G+LGHG+ T E P++I + N +V+ +H + +DG
Sbjct: 474 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 531
Query: 381 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+ T+G YG LGH + +P+ V+AL+D + + VA G Y T VV+ G ++FG
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFG 591
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
+ LG + + N L P ++ ER + + Y HT AL
Sbjct: 592 KNDYGQLGIDTM--------ENQLAP---VQVRGGLERQECLEIRCGYY---HTIALCSG 637
Query: 499 GKLYAFGAGDKGQLGI 514
L+AFG D GQLG+
Sbjct: 638 AHLFAFGRNDYGQLGL 653
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 29/282 (10%)
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
A + N T EG +S G ++ LGH + + + L+ ++QI AG
Sbjct: 357 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGH-GDTASRKSFERIQALQQKEIIQIGAGN 415
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ + L V++ G G+ G G H I + + Q G H
Sbjct: 416 EHTVVLTADGK---VFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN-GCEHT 471
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG- 432
+V DGRV T G+ G LGHGN ESVPK++++L + V+ Y T + EDG
Sbjct: 472 ILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGN 531
Query: 433 --DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
++Y+FG + LGHN D + PQ V +L ++++V ++
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRK--------IPQFVEALS--DQQIVSVACG-----QY 576
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTE----RGNPER 528
HT +T SGK +AFG D GQLGI+ + NQ RG ER
Sbjct: 577 HTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLER 618
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIR 198
EA ++ G H++ VT G ++FG N GQLG T E + P +R L+
Sbjct: 561 EALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQE 620
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ----------LVESL 248
++ G T+ + ++AFG++ +G+ G ++ Q L++ L
Sbjct: 621 CLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDEL 680
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ +V+ A G + T +S G +Y F N +LG V P P + +
Sbjct: 681 EGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP-IDDFVGKRIAL 739
Query: 309 IAAGYCYLLALA 320
+AAG+ + + L
Sbjct: 740 VAAGFYHTVVLT 751
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+IAV+ GV+Y FG N+ GQLG G T E P PI G RI AAG T+++
Sbjct: 691 GCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750
Query: 213 SDAGQVYAFGKDSFGEAE 230
+ + +DS + E
Sbjct: 751 TGGKEDDKNEQDSGNDKE 768
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + SG LGHG W P+ + LQG+ I + G T
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHT 427
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L++ AG+++ FG +FG +G + + ++ P+ VESLK + V+AA G + TA +
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEV 485
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ G+++T+ G+ RLGH + + P + +E Q+A G+ +
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHSLTV 544
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + +Y++G + G+LG+ + D K P +E +L +A GA+H AV+
Sbjct: 545 ALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKSFVEELACGAYHVAVLT 599
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V+AL D + +A G T +
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S+ + + A G L++ G+V+++G++ G +G G P+L+++
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHG--GDSDAHHPKLIDA 356
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L N+ + A G + T ++ G +YT WG N LGH + + P + G L+
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYT--WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ + I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 415 LHISSISCGPWHT---ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES--LKGLRT 469
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALV 529
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G +Y+ G LG N ADG+ P V
Sbjct: 530 EPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NPQADGK--------LPARV---- 576
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + S + A H LT ++Y +G G G+LG
Sbjct: 577 ---EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 616
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 147/307 (47%), Gaps = 38/307 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 299
P+ +ES+ + V A GN A+++++G V FSWG + RLGH + + P L+
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L N+ + +A G + A+ + + G G LGHG P+ + L
Sbjct: 356 ALSNLNIELVACGEYHTCAVTLS-GDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-PLQ 413
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
L ++ G WH A+V G++ T+G G +G LGHG+ + S+P+ V++L ++ + A
Sbjct: 414 GLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAA 473
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ A L P V
Sbjct: 474 CGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTCV 525
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ +S+ T ALT SG +Y G+ GQLG N Q + P
Sbjct: 526 AALVEPN--FCQVACGHSL-----TVALTNSGHIYTMGSPVYGQLG----NPQADGKLPA 574
Query: 528 RVDIDLS 534
RV+ LS
Sbjct: 575 RVEGKLS 581
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 423 GPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAV 482
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + +LV P V +L Q A G+
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGH 540
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G +YT +LG + + + P + G L V ++A G ++ L
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLG-NPQADGKLPARVEGKLSKSFVEELACGAYHVAVLT 599
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHGS D P L+E + ++ + AA H V
Sbjct: 600 ---SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 656
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 657 SGVDQSMCS 665
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
S+ D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 460
PK++ AL+++ VA G+Y T V+ GD+Y++G G S LGH G+ H
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-----GKDVSH-- 402
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+ VT Q + IS + W HT +T +GKL+ FG G G LG
Sbjct: 403 -WVPKRVTGPLQ----GLHISSISCGPW--HTALVTSAGKLFTFGDGTFGVLG 448
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 26/294 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++ G LGHG+ W P+ + ++GIR+ + GA T
Sbjct: 350 GEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHT 409
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---- 265
+++ AGQ++ FG SFG +G T P+ VE+L+ + + A G + TA
Sbjct: 410 AVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEA 467
Query: 266 ---LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
LS G ++YT+ G+ RLGH + P + +E + Q+A G
Sbjct: 468 INELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE-RICQVACGND 526
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+AL + VY++G G+LG + + K P +E ++ N VA G++H A
Sbjct: 527 LTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EIANSFVEEVACGSYHVA 581
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V+ V TWG G G LGHG+ + P +V L D + +VA G T V+
Sbjct: 582 VLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 162/361 (44%), Gaps = 42/361 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+++++G++S G +GV+ V+ P+++++
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDT 338
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G + T ++ G +YT+ G N LGH +E + P + G +E I
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIR 398
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG PR +E L L+
Sbjct: 399 VSYISCGAWH---TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTK 453
Query: 366 VAAGAWHAAVVGQ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
VA G WH A + ++ TWG G G LGHG+ E VP+ V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
+ + VA G+ T ++ G VY+ G LG +A A+G+ P V
Sbjct: 514 MEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGK--------LPTCVEG- 563
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ N V +++ + H LT ++Y +G G GQLG + R P VD
Sbjct: 564 EIANSFVEEVACG-----SYHVAVLTSKNEVYTWGKGLNGQLGH---GDNNHRNTPTIVD 615
Query: 531 I 531
+
Sbjct: 616 V 616
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 154/344 (44%), Gaps = 46/344 (13%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT +G ++S+G S G+LGHG + P+ I +L G + A G T +
Sbjct: 298 GGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQAAIGNFFTAVLSR 268
+ +G +Y +G G YG+ G S PQ V ++ I V + G + TAV++
Sbjct: 358 TLSGDLYTWGD---GTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTS 414
Query: 269 EGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 318
G+++TF G+ LGH P +VE TL + ++A G + A
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVE------TLRGLRTTKVACGVWHTAAAVEAI 468
Query: 319 -------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAG 369
+ PS +Y+ G G G+LGHG + PRL+ + L+ + VA G
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHG----DNEPRLVPECVAALMEERICQVACG 524
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 428
+ GRV T G YG LG + +P V+ + + VA G Y V+
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVL 583
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ +VY++G G + LGH N H N TP +V LK
Sbjct: 584 TSKNEVYTWGKGLNGQLGHG------DNNHRN--TPTIVDVLKD 619
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
+G + S+ D P+ +E +L++ + A G HA +V + G + +WG G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HG E S PK++ L+ VA G+Y T V+ GD+Y++G G HN G
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGT-----HNYGLLGH 378
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G+ ++ + PQ V+ + +++S + W HT +T +G+L+ FG G G LG
Sbjct: 379 GSEVSHWI-PQKVSGQME----GIRVSYISCGAW--HTAVVTSAGQLFTFGDGSFGALG 430
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS + GQLG T + + + + A G+
Sbjct: 520 QVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYH 579
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK G+ +G + +P +V+ LK+ V A G+ FT V+
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHR--NTPTIVDVLKDKQVKNVACGSKFTVVI 635
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 151/341 (44%), Gaps = 38/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+++++G++S G +GV V P+L+++
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VMHPKLIDA 358
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N + A G + T ++ G +YT+ G N LGH E + P + G LE I
Sbjct: 359 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG R P+ +E L L+ V
Sbjct: 419 VSSISCGPWH---TAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVE--SLKGLRTVQ 473
Query: 366 VAAGAWHAAVV------------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V G++ TWG G G LGHG++E + VP V AL +
Sbjct: 474 AACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 533
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T + G VY+ G LG N +ADG+ P V
Sbjct: 534 NFCQVACGHSLTVARTTSGHVYTMGSPVYGQLG-NPLADGK--------LPTRV------ 578
Query: 474 NERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + S I A H LT ++Y +G G G+LG
Sbjct: 579 -EGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 618
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 44/320 (13%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 288
+GV+ L P+ +ES + V A G A+++++G + FSWG ++ RLGH +
Sbjct: 292 FGVKMDSLF--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 347
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTD 346
+ + P L+ L N + +A G + A+ +Y+ G G G LGHG+
Sbjct: 348 SDVMHPK-LIDALSNTNIELVACGEYHTCAVTLSGD---LYTWGDGTYNFGLLGHGNEVS 403
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
P+ + L + ++ G WH AVV G++ T+G G +G LGHG+ + S+PK
Sbjct: 404 HWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKE 462
Query: 407 VQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQ 454
V++L ++ + A G + T V E G ++++G G+ LGH
Sbjct: 463 VESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------- 515
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
G++ A L P V +L + N Q++ +S+ T A T SG +Y G+ GQLG
Sbjct: 516 GDKEAK-LVPTCVAALVEPN--FCQVACGHSL-----TVARTTSGHVYTMGSPVYGQLGN 567
Query: 515 ELVNNQTERGNPERVDIDLS 534
L + + P RV+ LS
Sbjct: 568 PLADGKL----PTRVEGKLS 583
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 150/347 (43%), Gaps = 74/347 (21%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q IA G H+ VT +G ++S+G S G+LGHG + P+ I +L I A G
Sbjct: 313 QNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEY 372
Query: 208 RTMLISDAGQVYAFGKD------------------------------------------- 224
T ++ +G +Y +G
Sbjct: 373 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 432
Query: 225 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 266
+FG+ +GV G K ++ P+ VESLK + VQAA G + TA +
Sbjct: 433 TSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNS 492
Query: 267 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G+++T+ G+ RLGH + + P + L Q+A G+ L +A
Sbjct: 493 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHS--LTVART 549
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
SG VY++G + G+LG+ D K P +E +L +A GA+H AV+ V
Sbjct: 550 TSGH-VYTMGSPVYGQLGN-PLADGKLPTRVEG-KLSKSFVEEIACGAYHVAVLTSKTEV 606
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
TWG G G LGHG+ + + P +V+AL D + +A G T+F +
Sbjct: 607 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG--TSFTAA 651
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 129/313 (41%), Gaps = 35/313 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + P+ + SL+G+R +QAA G T +
Sbjct: 425 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAV 484
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 485 IEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 542
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T + G VYT +LG+ + P + G L V +IA G ++ L
Sbjct: 543 SLTVARTTSGHVYTMGSPVYGQLGNPLADGKL-PTRVEGKLSKSFVEEIACGAYHVAVLT 601
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ + AA H V
Sbjct: 602 ---SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWV 658
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 423
G D +C+ + R+ C G C S K A N KA V Y
Sbjct: 659 SGVDQSMCSGCRLPFNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCY 718
Query: 424 TTFVVSEDGDVYS 436
+ + D S
Sbjct: 719 NKLRKAIETDASS 731
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 169/363 (46%), Gaps = 37/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ S G V+++G N GQLG GTT P +++L G II ++G ++
Sbjct: 232 AGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLA 289
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ D G V+A+G + G+ G +K + P V+ L I V + G +++ L +G
Sbjct: 290 LKDDGTVWAWGDNESGQLGDGTTNSKYI--PSQVQGLSGI--VSISCGFYYSMALKNDGT 345
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +LG T + P+ G L+ V+ IA G + +AL + V++
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTAVPVSG-LDG--VIAIACGVNHSMALRNDGT---VWTW 399
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G++ + I + + + G H+ + DG V WG +YG
Sbjct: 400 GFNAFGQLGDGTKVSKNTAVPISGLDGI----IAITCGTSHSMALKDDGTVWAWGDNQYG 455
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG+G + P V L+ +K+I G T+F + DG V+++G E LG
Sbjct: 456 QLGNGTFISNTTPSQVSNLSGIKSIFC--GYSTSFALKPDGTVWAWGNNEYGELGKG--- 510
Query: 452 DGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
T +++ + +N + IS+ +S H AL G ++A+G G
Sbjct: 511 ----------FTTRVIYPTETLNIGDIKAISIGSS-----HCLALKNDGTVWAWGDNRYG 555
Query: 511 QLG 513
QLG
Sbjct: 556 QLG 558
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 170/363 (46%), Gaps = 39/363 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ S G V++ G N GQLG+ T + P P+ L + I +AG +M +
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI--SAGKYYSMAL 240
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+ +G++ +G+ G T+L SP V++L I + + GN + L +G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRL--SPVQVQNLSGIIAISS--GNSHSLALKDDGTV 296
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ +WG++ +LG T + P + G L I V I+ G+ Y +AL + V+
Sbjct: 297 W--AWGDNESGQLGDGTTNSKYIPSQVQG-LSGI--VSISCGFYYSMALKNDGT---VWV 348
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ TD + + + +A G H+ + DG V TWG+ +
Sbjct: 349 WGDNTSGQLGDGTTTDRNTAVPVSGLDGV----IAIACGVNHSMALRNDGTVWTWGFNAF 404
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G + ++ + L+ + AI T + + +DG V+++G + LG+
Sbjct: 405 GQLGDGTKVSKNTAVPISGLDGIIAITCGTSH--SMALKDDGTVWAWGDNQYGQLGN--- 459
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G +N TP V++L + S +FAL G ++A+G + G
Sbjct: 460 ----GTFISNT-TPSQVSNLSGIKSIFCGYS---------TSFALKPDGTVWAWGNNEYG 505
Query: 511 QLG 513
+LG
Sbjct: 506 ELG 508
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 44/367 (11%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS+A+ + G V+++G N+ GQLG GT + PI L GI I G
Sbjct: 379 AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDGI--IAITCGTSH 436
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M + D G V+A+G + +G+ G + T+P V +L I + F L
Sbjct: 437 SMALKDDGTVWAWGDNQYGQLGNGTFISN--TTPSQVSNLSGIKSIFCGYSTSF--ALKP 492
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G V+ +WGN+ LG + P L + +I + I + +C LA + G
Sbjct: 493 DGTVW--AWGNNEYGELGKGFTTRVIYPTETL-NIGDIKAISIGSSHC----LALKNDG- 544
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG G+ T + P + + ++AG H+ + DG V WG
Sbjct: 545 TVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGI----TAISAGGSHSLALKSDGTVWAWG 600
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G +E + P V L+ + I Y +F + DG V+ +G
Sbjct: 601 QNNVGQLGDGTKEDRNTPVQVSELSGITVISNCI--YRSFALKNDGTVWVWG-------- 650
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+D + P ++ L + I++ Y H AL G ++A+G
Sbjct: 651 ----SDSYNLPLEKMTMPIQISGLSGI------IAIECGTY---HNLALKNDGTVWAWGK 697
Query: 507 GDKGQLG 513
+ GQ G
Sbjct: 698 NNFGQFG 704
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 171/407 (42%), Gaps = 89/407 (21%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR------------- 198
+G HS+A+ G V+++G N SGQLG GTT ++ P ++ L GI
Sbjct: 282 SGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALK 341
Query: 199 -----------------------------------IIQAAAGAGRTMLISDAGQVYAFGK 223
+I A G +M + + G V+ +G
Sbjct: 342 NDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGF 401
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
++FG+ G + +K P + L I + G + L +G V+ +WG++
Sbjct: 402 NAFGQLGDGTKVSKNTAVP--ISGLDGIIAITC--GTSHSMALKDDGTVW--AWGDNQYG 455
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAVYSVGCGLGGKLG 340
+LG+ T ++ P + L I + +C Y + A +P G V++ G G+LG
Sbjct: 456 QLGNGTFISNTTPSQ-VSNLSGIKSI-----FCGYSTSFALKPDG-TVWAWGNNEYGELG 508
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G T R+I + LN+ + ++ G+ H + DG V WG RYG LG G
Sbjct: 509 KGFTT-----RVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTT 563
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+S+P V ++ + AI + G + + DG V+++G LG D R+
Sbjct: 564 IKSLPVQVSGISGITAI--SAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED----RN- 616
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
TP V+ L + ++N IY +FAL G ++ +G+
Sbjct: 617 ---TPVQVSELSGIT------VISNCIY---RSFALKNDGTVWVWGS 651
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 167/408 (40%), Gaps = 88/408 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+A+ G V+++G N GQLG+GT P + +L GI+ I G + +
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSI--FCGYSTSFAL 490
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+A+G + +GE G T V P ++ +I + +IG+ L +G V
Sbjct: 491 KPDGTVWAWGNNEYGELGKGF--TTRVIYPTETLNIGDIKAI--SIGSSHCLALKNDGTV 546
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ +WG++ +LG T P + G + I+AG + LAL S V++
Sbjct: 547 W--AWGDNRYGQLGDGTTTIKSLPVQVSGIS---GITAISAGGSHSLAL---KSDGTVWA 598
Query: 331 VGCGLGGKLGHGSRTDEKHP---------------------------------------- 350
G G+LG G++ D P
Sbjct: 599 WGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPL 658
Query: 351 -RLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
++ Q+ L ++ + G +H + DG V WG +G G G ++P V
Sbjct: 659 EKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVS 718
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV- 467
L+ VKAI A G + + DG V+ +G R ++P V
Sbjct: 719 GLSGVKAI--AVGGNRSIALKSDGTVWQWG------------------RILVSVSPSTVE 758
Query: 468 --TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
T+ +QV+ +S++N++ AL GK++ +GA D GQLG
Sbjct: 759 TWTTARQVDGLSEIVSISNNV-------ALKNDGKVFTWGANDYGQLG 799
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 127/301 (42%), Gaps = 37/301 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V+++G N+ GQLG GT E+ P + L GI +I R+
Sbjct: 582 AGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNC--IYRSFA 639
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G DS+ + +T P + L I ++ G + L +G
Sbjct: 640 LKNDGTVWVWGSDSYNLP------LEKMTMPIQISGLSGIIAIEC--GTYHNLALKNDGT 691
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + N + G T T NIP VQ+ +G + A+A + S+
Sbjct: 692 VWAWGKNNFGQFGDGTT-----------TTTNIP-VQV-SGLSGVKAIAVGGN----RSI 734
Query: 332 GCGLGGKLGHGSRT-DEKHPRLIEQF----QLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
G + R P +E + Q+ L +V + + + DG+V TWG
Sbjct: 735 ALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSIS---NNVALKNDGKVFTWG 791
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG G V L V VA+ D T+ V+ DG + ++G LG
Sbjct: 792 ANDYGQLGDGTTTARVTVAPVSGLEGVAG--VASSDTTSMVLMNDGTIRAWGKNNFGQLG 849
Query: 447 H 447
+
Sbjct: 850 N 850
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 363 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
P++ V+ G H + DG V G YG LG+ N + P V+ LN V +I + G
Sbjct: 176 PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI--SAG 233
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
Y + + DG V+++G + LG DG A L+P V +L ++ IS
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLG-----DGT---TATRLSPVQVQNL----SGIIAIS 281
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
NS H+ AL + G ++A+G + GQLG N++
Sbjct: 282 SGNS-----HSLALKDDGTVWAWGDNESGQLGDGTTNSK 315
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
I +++A+ + G V+++G+N GQLG GTT P+ L+G+ + A+ +M
Sbjct: 772 IVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGV--ASSDTTSM 829
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQG 235
++ + G + A+GK++FG+ G +G
Sbjct: 830 VLMNDGTIRAWGKNNFGQLGNGERG 854
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 40/368 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ +AG H+ ++ S G VY +G GQ+G P R L + I G
Sbjct: 38 KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIH--TGVRS 95
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
TM + G V+ +G + G+ G K V +P V L I + +G + + L+
Sbjct: 96 TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTP--VSGLSGIKAISGGLG-YHSMALTE 152
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G V+T+ ++ LG+ T P ++G + V IAAG Y LAL + +
Sbjct: 153 NGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD---VTAIAAGGYYSLALKSDGT---I 206
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 387
++ G G+LG G+ D+ P Q+ L V+ + AG H+ + QDG V WG
Sbjct: 207 WAWGANGNGELGDGTIVDKHTP-----VQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGI 261
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA--SL 445
YG LG G ++P V+ L +KAI A G + + + ++G+V+ +G L
Sbjct: 262 NMYGTLGDGTRTNRTIPVKVRNLQHIKAI--AGGGHHSLALDQEGNVWGWGDNSRGQLGL 319
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GHN ++ TP+ +T + E V+ I+ H+ AL + G+++ +G
Sbjct: 320 GHN----------SSRTTPEQLTGI----EHVLDIAGG-----GFHSAALKKDGRVWGWG 360
Query: 506 AGDKGQLG 513
GQ+G
Sbjct: 361 LNSSGQIG 368
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
++A+ S G V+++GSN +GQLG GTT ++ P P+ L GI+ I G +M +++ G
Sbjct: 96 TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSGIKAISGGLGY-HSMALTENG 154
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
V+ +GK+ GE G T SP LV L ++ + A G +++ L +G ++ +
Sbjct: 155 TVWTWGKNDNGELGNGT--TVQQNSPVLVIGLSDVTAIAA--GGYYSLALKSDGTIWAWG 210
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+ LG T + P + G + V+ I AG + LA+ + V++ G +
Sbjct: 211 ANGNGELGDGTIVDKHTPVQVSGLSD---VIAITAGGSHSLAIKQDGT---VWAWGINMY 264
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G LG G+RT+ P ++ NLQ + +A G H+ + Q+G V WG G LG
Sbjct: 265 GTLGDGTRTNRTIP-----VKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGL 319
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ + P+ + + V + +A G + + + +DG V+ +G S +G D
Sbjct: 320 GHNSSRTTPEQLTGIEHV--LDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRND--- 374
Query: 456 NRHANVLTPQLVTS 469
R+A LT ++ +
Sbjct: 375 -RNAPALTKAVLDT 387
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 43/330 (13%)
Query: 204 AGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
AG T + +G VY +G + G+A + + T P L ++ + + +
Sbjct: 41 AGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNT-----PVQARGLNDVMDIHTGVRS 95
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L +G V+T+ + +LG T + P P+ G L I + GY ++A
Sbjct: 96 --TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSG-LSGIKAISGGLGYH---SMA 149
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 379
+G V++ G G+LG+G+ + P L+ + L V +AAG +++ + D
Sbjct: 150 LTENG-TVWTWGKNDNGELGNGTTVQQNSPVLV-----IGLSDVTAIAAGGYYSLALKSD 203
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G + WG G LG G + P V L+DV AI G + + +DG V+++G
Sbjct: 204 GTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDVIAI--TAGGSHSLAIKQDGTVWAWGI 261
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+LG G R N P V +L+ + H+ AL + G
Sbjct: 262 NMYGTLG-------DGTR-TNRTIPVKVRNLQHIKAIAGG---------GHHSLALDQEG 304
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERV 529
++ +G +GQLG+ + + R PE++
Sbjct: 305 NVWGWGDNSRGQLGL---GHNSSRTTPEQL 331
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ S G ++++G+N +G+LG GT ++ P + L +I AG ++
Sbjct: 192 AGGYYSLALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLS--DVIAITAGGSHSLA 249
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G V+A+G + +G G + + T P V +L++I + A G + L +EG
Sbjct: 250 IKQDGTVWAWGINMYGTLGDGTRTNR--TIPVKVRNLQHIKAI--AGGGHHSLALDQEGN 305
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V+ WG+++R LGH++ P L G +E+ V+ IA G + AL
Sbjct: 306 VW--GWGDNSRGQLGLGHNSSR--TTPEQLTG-IEH--VLDIAGGGFHSAALKKDGR--- 355
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIE 354
V+ G G++G G+R D P L +
Sbjct: 356 VWGWGLNSSGQIGDGTRNDRNAPALTK 382
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 152/301 (50%), Gaps = 11/301 (3%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E QA +G HS+ + S G ++S G NS GQLG + + P+ IR+L +R+ + G
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCG 83
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ +
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGVG-EFKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142
Query: 266 LSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
LS G+V FSWG+++ +LG E P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 143 LSEGGQV--FSWGSNSHGQLGLGKECPSQASPQ-RVRSLDGIPLTQVAAGGAHSFALSLS 199
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ S G + PR I L NL + ++ G H AV+ Q G+V
Sbjct: 200 GASFGWGSNNAGQLALRQNNVPVQSHKPRSIG--ALKNLGVIYISCGYEHTAVLTQTGKV 257
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 441
T+G YG LGH + P++V+ ++ + + + G Y T V G V SFG G
Sbjct: 258 FTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFGRGP 316
Query: 442 S 442
S
Sbjct: 317 S 317
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 101/223 (45%), Gaps = 20/223 (8%)
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
Q A+G + L L S ++S G G+LG ++HP+ I L NL+ +V+
Sbjct: 27 QAASGERHSLLLL---SNGELHSCGDNSQGQLGRKGVQRDEHPKRIRT--LDNLRVDLVS 81
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTF 426
G H+ V GRV WG G G LG G +E +P ++ L +K I V+ G Y +
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSL 141
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+SE G V+S+G LG Q +PQ V SL I LT
Sbjct: 142 ALSEGGQVFSWGSNSHGQLGLGKECPSQA-------SPQRVRSLDG-------IPLTQVA 187
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
AH+FAL+ SG + +G+ + GQL + N + P +
Sbjct: 188 AGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSI 230
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 40/271 (14%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
QAA G + +L G +++ + +LG D P + TL+N+ V ++ G
Sbjct: 27 QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPK-RIRTLDNLRVDLVSCGKE 85
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----------- 363
+ LA+ + V++ G G G+LG G +F+ +NL P
Sbjct: 86 HSLAVCYKGR---VFAWGAGSEGQLGVG------------EFKEINLIPTKIKTLTGIKI 130
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 422
+ V+ G +H+ + + G+V +WG +G LG G E ++ P+ V++L+ + VA G
Sbjct: 131 IQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+F +S G + +G + L A Q N P+ + +LK + V+ IS
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQL-----ALRQNNVPVQSHKPRSIGALKNLG--VIYISC 243
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
HT LT++GK++ FG GQLG
Sbjct: 244 GYE-----HTAVLTQTGKVFTFGGNSYGQLG 269
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT + P+ + S + + + G ML++ G+ +++G+++ G +G + V
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETD--V 348
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPH 295
+ P+L+++ K + V A G + + ++ G +YT WG+ A+ LGH +E + P
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYT--WGDGAKSSGLLGHRSEASHWIPK 406
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+ G +E + V ++ G + + S +++ G G G LGHG R+ PR +E
Sbjct: 407 KVCGLMEGLRVSHVSCGPWHTALIT---SAGRLFTFGDGTFGALGHGDRSGCITPREVET 463
Query: 356 FQLLNLQPVVVAAGAWHAAVV-----GQDGR--------VCTWGWGRYGCLGHGNEECES 402
F L+ + VA G WH A V G D R + TWG G G LGHG+ +
Sbjct: 464 FN--GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL 521
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P+ + AL D VA T ++ G VY+ G LG AN +
Sbjct: 522 APQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL---------ANGM 572
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+P V V+ V +IS + H LT ++Y +G G+ GQLG N+
Sbjct: 573 SPICVEDY-LVDSTVEEISCGSH-----HVAVLTSRTEVYTWGKGENGQLGHGDCENKC- 625
Query: 523 RGNPERVDI 531
P VDI
Sbjct: 626 --TPTLVDI 632
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 36/362 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT +G +S+G + G+LGHG + P+ I++ +G+ + A G + +
Sbjct: 316 GNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAV 375
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESL-KNIFVVQAAIGNFFTAVLSR 268
+ +G +Y +G G G+ G + S P+ V L + + V + G + TA+++
Sbjct: 376 TSSGDLYTWGD---GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITS 432
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 326
GR++TF G LGH + P + T + +++A G + A+ SG+
Sbjct: 433 AGRLFTFGDGTFGALGHGDRSGCITPRE-VETFNGLKTLKVACGVWHTAAVVELMSGLDS 491
Query: 327 --------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGAWHAAVV 376
+++ G G GKLGHG + PRL Q L++ VA +
Sbjct: 492 RPSDAPSGTLFTWGDGDKGKLGHG----DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
GRV T G YG LG S V L D ++ G + V++ +VY+
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFA 494
+G GE+ LGH N TP LV L KQV V + + +I H +A
Sbjct: 608 WGKGENGQLGHGDC--------ENKCTPTLVDILRDKQVKRIVCGSNFSAAIC--VHNWA 657
Query: 495 LT 496
L+
Sbjct: 658 LS 659
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ +TS G +++FG + G LGHG PR + + G++ ++ A G
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVW 477
Query: 208 RTMLI-----------SDA--GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
T + SDA G ++ +G G+ +G +L +PQ + +L +
Sbjct: 478 HTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRL--APQCITALVDKSFS 535
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ A T L+ GRVYT +LG N + P + L + V +I+ G
Sbjct: 536 EVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL-ANGMSPICVEDYLVDSTVEEISCGSH 594
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAG 369
++ L S VY+ G G G+LGHG ++ P L++ + ++ +V AA
Sbjct: 595 HVAVLT---SRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651
Query: 370 AWHAAVVGQDGRVCTWGWGRYGC 392
H + D +C +GC
Sbjct: 652 CVHNWALSADNSIC------FGC 668
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 115 bits (289), Expect = 4e-23, Method: Composition-based stats.
Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 75/355 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---GIRIIQAAAGAGRT 209
G H+ +T KG +Y++G G+LGHGT E PR + + +R++ A G T
Sbjct: 169 GAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHT 228
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV--------------------ESLK 249
+ ++ G VY+FG + + G + ++PQLV S
Sbjct: 229 VALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTS 288
Query: 250 NIF-------------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
+F +++ + +A +S+ G +YT+ G++ RLGH P
Sbjct: 289 TLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQ 348
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQ 355
++ +L +V ++ G + +AL + V+S G G G+LGHG+ T ++ P+ I+
Sbjct: 349 VM-SLHGHTIVDMSLGGGHSMALTKRGE---VFSWGRGENGQLGHGTFTSQQMTPKQIQA 404
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
FQ N V++AG +H+ + +G + WG G YG LG V + +L D+ +
Sbjct: 405 FQ--NKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLG--------VSSSLDSLGDINS 454
Query: 416 ------------------------IHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
I+V++G +E+GD+YS+GCG LG
Sbjct: 455 PVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLG 509
Score = 95.1 bits (235), Expect = 8e-17, Method: Composition-based stats.
Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 52/365 (14%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVV 254
+++ + GA T +I+D G +Y +G G+ +G + + P+LVE + ++ VV
Sbjct: 162 KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGT--LESYSEPRLVEFFETKPSLRVV 219
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---------------- 298
A G T L+ G VY+F + +LG + P L
Sbjct: 220 SVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSS 279
Query: 299 --------GTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGCGLGGKLGHGS 343
TL N Q + ++ L+C + A +Y+ G G G+LGHG
Sbjct: 280 PIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGD 339
Query: 344 RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+ P+ Q L+ +V ++ G H+ + + G V +WG G G LGHG +
Sbjct: 340 SLMQSTPK---QVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQ 396
Query: 403 V-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+ PK +QA + ++ G Y + + +G ++++G G+ LG ++ D G+ ++ V
Sbjct: 397 MTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSPV 456
Query: 462 LTP------QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
L S ER + +S H A TE+G LY++G G +LG+
Sbjct: 457 LIKSLNNSNGSNNSNSSAGERFINVSSGFQ-----HNVAQTENGDLYSWGCGSGNRLGLA 511
Query: 516 LVNNQ 520
NQ
Sbjct: 512 NEENQ 516
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 55/328 (16%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGI-------------- 197
G H++A+T G VYSFG N S QLG G + P + + Q
Sbjct: 224 GGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIM 283
Query: 198 --------------------RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
RII+ + R+ IS G +Y +G+ G +G +
Sbjct: 284 SNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHG--DSL 341
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
+ ++P+ V SL +V ++G + L++ G V+++ G + +LGH T +
Sbjct: 342 MQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQ 401
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLI 353
+ +N + I+AG + +A+ S +++ G G G LG S D P LI
Sbjct: 402 IQAFQNKTIKVISAGGYHSIAIDTNGS---MFAWGRGDYGVLGVSSSLDSLGDINSPVLI 458
Query: 354 EQFQLLNLQP----------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ N + V++G H ++G + +WG G LG NEE + +
Sbjct: 459 KSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLI 518
Query: 404 PKVVQ-ALNDVKAIHVATGDYTTFVVSE 430
PK + N+ K + G+ T +V +
Sbjct: 519 PKKLNDRSNNSKPAFFSCGEIITIIVEK 546
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-- 411
E+ L + V ++ GA H +++ G + TWG G G LGHG E S P++V+
Sbjct: 154 ERIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETK 213
Query: 412 -DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT-- 468
++ + VA G T ++ G+VYSFG +S LG I+ + TPQLVT
Sbjct: 214 PSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYS------TPQLVTFQ 267
Query: 469 ----SLKQVNERVVQISLTNSIYWNAH--------------------TFALTESGKLYAF 504
+ + +S + S +N + A+++ G LY +
Sbjct: 268 SPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTW 327
Query: 505 GAGDKGQLG 513
G GD G+LG
Sbjct: 328 GRGDNGRLG 336
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 168/355 (47%), Gaps = 33/355 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V ++GS GQLG GT +E+ + +L+ + +G+ ++ I D G ++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G + + TK P V++L N+ +VQAAIG + + +GR Y + + G
Sbjct: 67 RGTLGHPPE-TKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 286 HTEPNDVEPHPLLGTL-------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+++E PL + + V Q+AAG + + L + V+S G
Sbjct: 126 EPGKDEME-RPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGH---VWS----WGQP 177
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G P ++ + + L +A GA+H + ++G + WG YG LG G+
Sbjct: 178 WPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALEENGTLWAWGNNEYGQLGTGDT 233
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ S P VQ L+ + + +A G + + +++ G+VY +G GE LG N
Sbjct: 234 QPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGD------NDK 287
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ + PQ V L E ++Q+S + H+ ALT G++++FG GD G+LG
Sbjct: 288 SSKMLPQKVNLL--AGEDIIQVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 149/308 (48%), Gaps = 28/308 (9%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
++G +S+A+ G ++++G N G LGH T+ E P +++L ++I+QAA G
Sbjct: 44 VSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLV---ESLKNIFVVQAAIGNFFTA 264
+ + D G+ YA+G + +G+ E G + +V + V Q A G +
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSV 163
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALA 320
VL+REG V+++ G P D++ P + G LEN+ ++ + A LA
Sbjct: 164 VLTREGHVWSW--------GQPWPPGDIKQISIPVRVQG-LENVRLIAVGA----FHNLA 210
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+ +G +++ G G+LG G P ++ L L V +AAG WH+ + G
Sbjct: 211 LEENG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTL--VDIAAGGWHSTALTDKG 267
Query: 381 RVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++SFG
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 439 CGESASLG 446
G+ LG
Sbjct: 328 RGDHGRLG 335
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN + IA G H++A+ G ++++G+N GQLG G T+ +P P++ L + ++ AA
Sbjct: 196 ENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAA 255
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G + ++D G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 265 VLSREGRVYTFSWGNDARLG 284
L+R+GR+++F G+ RLG
Sbjct: 316 ALTRDGRIFSFGRGDHGRLG 335
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G G LG G + + VV+AL V +G + + +DG ++++G +
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+LGH + N+ P V +L N ++VQ ++ W H A+ + G+
Sbjct: 67 RGTLGHPPE-----TKTENI--PSQVKAL--ANVKIVQAAIGG---W--HCLAVDDQGRA 112
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
YA+G + GQ G E ++ ER P R DI
Sbjct: 113 YAWGGNEYGQCGEEPGKDEMER--PLRRDI 140
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 155/297 (52%), Gaps = 14/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT G +Y FGSN+ GQLG G+ +P +++L+ ++ AA G T++
Sbjct: 43 GDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLIC 102
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 271
++ G VYA G +S E + G+ T+ ++ L+ K + Q A G++ +AVL+ +G+
Sbjct: 103 TEQGNVYAAGGNS--EGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQ 160
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ + ++ ++G + PH + +G PV I+ GY Y AL Q +Y+
Sbjct: 161 LVMWGDNSEGQIGLGDKAYVSVPHQVDIGK----PVSCISCGY-YHSALITQDG--ELYT 213
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G GKLG + + H +L + ++ + VA G H V+ + G V T+G G+Y
Sbjct: 214 FGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAE-GDVYTFGLGQY 271
Query: 391 GCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LGHG E S PK V L K H+A G+ T +++E+G +Y+FG G LG
Sbjct: 272 GQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLG 328
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 16/253 (6%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++ T +G VY+ G NS GQLG G TEE I + +I Q AAG+
Sbjct: 92 AACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYT 151
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++++ GQ+ +G +S E + G+ V+ P V+ K + + + G + +A++++
Sbjct: 152 SAVLTEDGQLVMWGDNS--EGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQ 207
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI--PVVQIAAGYCYLLALACQPSGM 326
+G +YTF + +LG P ++ H L + I V ++A G + + LA
Sbjct: 208 DGELYTFGEPENGKLG--LSPKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLA----EG 261
Query: 327 AVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
VY+ G G G+LGHG+ E P+ ++ L + +A G H A++ ++G + T+
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSEPKTVD--HLGKHKICHIACGENHTALITENGLMYTF 319
Query: 386 GWGRYGCLGHGNE 398
G GR+G LG G E
Sbjct: 320 GDGRHGKLGLGEE 332
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 154/324 (47%), Gaps = 29/324 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
+ + + + G T ++++ G++Y FG +++G+ +G + V P V++LK V
Sbjct: 32 FKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNA--VNKPTCVKALKPEKV 89
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
AA G T + + +G VY ++ +LG H + + + Q+AAG
Sbjct: 90 KLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAG- 148
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWH 372
Y A+ + + ++ G G++G G + P ++ + PV ++ G +H
Sbjct: 149 SYTSAVLTEDGQLVMW--GDNSEGQIGLGDKAYVSVPHQVDIGK-----PVSCISCGYYH 201
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSE 430
+A++ QDG + T+G G LG ++ ++ +P++V ++ K VA G T V++E
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE 260
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
GDVY+FG G+ LGH P+ V L + ++ I+ +
Sbjct: 261 -GDVYTFGLGQYGQLGHGTFV-------FETSEPKTVDHLGK--HKICHIACGEN----- 305
Query: 491 HTFALTESGKLYAFGAGDKGQLGI 514
HT +TE+G +Y FG G G+LG+
Sbjct: 306 HTALITENGLMYTFGDGRHGKLGL 329
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 34/302 (11%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ ++G V+ FGK F E V S KN + + G+ T+V++ G+
Sbjct: 8 VPESGAVFTFGKCKFAEN---------VPSKFW---FKNDKPLHISCGDEHTSVVTENGK 55
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+Y F N +LG ++ N V + L+ V A G + L C G VY+
Sbjct: 56 LYMFGSNNWGQLGFGSK-NAVNKPTCVKALKPEKVKLAACGRNH--TLICTEQG-NVYAA 111
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G T+E+ + F + +AAG++ +AV+ +DG++ WG G
Sbjct: 112 GGNSEGQLGLGD-TEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEG 170
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
+G G++ SVP V V I + G Y + ++++DG++Y+FG E+ LG ++
Sbjct: 171 QIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQDGELYTFGEPENGKLG---LS 225
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
Q H PQLV+ ++ +V +++ HT L E G +Y FG G GQ
Sbjct: 226 PKQLKNHK---LPQLVSG---ISGKVSKVAC-----GGGHTVVLAE-GDVYTFGLGQYGQ 273
Query: 512 LG 513
LG
Sbjct: 274 LG 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG S +T G + +G NS GQ+G G P + + + I + G
Sbjct: 144 QLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYH 201
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ LI+ G++Y FG+ G+ + K PQLV + V + A G T VL+
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGK-VSKVACGGGHTVVLA- 259
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
EG VYTF G +LGH T + + L + IA G + + +G+ +
Sbjct: 260 EGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALIT--ENGL-M 316
Query: 329 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
Y+ G G GKLG G T++ P L F L VA G H V
Sbjct: 317 YTFGDGRHGKLGLGEENYTNQFVPTLCSNF--LRFIVHSVACGGCHMLV 363
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F N +P+ ++ G H +VV ++G++ +G +G LG G++ + P V+AL K
Sbjct: 29 KFWFKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEK 88
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
A G T + +E G+VY+ G LG + D + ++++ T ++
Sbjct: 89 VKLAACGRNHTLICTEQGNVYAAGGNSEGQLG---LGDTEERSTFHLIS--FFTKQHKIK 143
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ L Y +A LTE G+L +G +GQ+G+
Sbjct: 144 Q------LAAGSYTSA---VLTEDGQLVMWGDNSEGQIGL 174
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 13/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ + G VY+ G N GQLGH + +P + SL I+ + G T+ +
Sbjct: 42 GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK--KPEQVVSLDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D GQV+A+G S G+ + L P+ V+SL + + Q A G + + L+R G +
Sbjct: 100 NDKGQVFAWGLGSDGQLGLSIVEDCLRV-PRTVKSLSEVHITQVACGYWHSLALARGGEI 158
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
FSWG + +LG + V ++ +L+ IP QI+AG + L SG A++
Sbjct: 159 --FSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTL--SG-AIFG 213
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G D + P L++ L + Q V + G H A + ++G V T+G G Y
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLK--TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
G LGH + E P+ V L +A G +T + G + SFG G + LG
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG 328
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 166/356 (46%), Gaps = 28/356 (7%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR +G R+ G T+ + + G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V SL +V + G T L+ +G+V+ + G+D +LG
Sbjct: 64 GQLGH----EKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 345
+ + + +L + + Q+A GY + LALA G ++S G G+LG G +
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA---RGGEIFSWGQNKYGQLGLGQQGA 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
P++I+ Q + + +AG H+ + G + WG ++G LG G+ + P
Sbjct: 177 CVCSPQVIQSLQGIPFGQI--SAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPV 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
+++ L + +++ G+ T ++++G V++FG G LGHN+ N N P+
Sbjct: 235 LLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PR 286
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 520
V L + V QI+ HT A SGK+ +FG G GQLG N+
Sbjct: 287 KVFEL--MGSVVSQIACGRQ-----HTLAFIPSSGKIDSFGLGGNGQLGTRSTCNR 335
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 206
+Q G HS+A+ G ++S+G N GQLG G P+ I+SLQGI Q +AG
Sbjct: 140 TQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGG 199
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ +G ++ +G++ FG+ G + P L+++L++ VV G TA L
Sbjct: 200 AHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRF--PVLLKTLRSQQVVYICCGEDHTAAL 257
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
++EG V+TF G +LGH++ ++V P + + ++ V QIA G + LA PS
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSV-VSQIACGRQHTLAFI--PSSG 314
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHP 350
+ S G G G+LG S + P
Sbjct: 315 KIDSFGLGGNGQLGTRSTCNRISP 338
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG G ++ P +++L+ +++ G
Sbjct: 194 QISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDH 253
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G + G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIP 311
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G++ +F G + +LG + N + P P+ G
Sbjct: 312 SSGKIDSFGLGGNGQLGTRSTCNRISPTPVKG 343
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 38/370 (10%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
++ KG ++ +G+ G+LG G E+E P + + I Q A G T++I+ G
Sbjct: 26 SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDG 85
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
++Y+ G + +G+ + +L QL+ L + A G + T ++ G++ FS
Sbjct: 86 KIYSCGNNDYGQLGHERGRKRL----QLILGLDAFVFKKVACGAYHTIAVNEWGQL--FS 139
Query: 277 WGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
WG+++ +LG +++ N +E P ++ TL +VQ+A G + LAL + +YS G
Sbjct: 140 WGSNSEGQLGLNSK-NFMECSPRMVKTLGTSIIVQVACGMKHALALT---NNGELYSWGS 195
Query: 334 GLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G E P+LI L + +A G +H+ + + G + WG +G
Sbjct: 196 NSEGQLGLGVDIRSEVKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 253
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG + + ++P +Q L + K + A G+ + ++ DG V++ G G LGH
Sbjct: 254 LGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH----- 308
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQ 511
G N N + P+ V L + V QIS HT AL S G++YA+G G GQ
Sbjct: 309 GSNN---NEILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSQGRVYAWGLGGAGQ 358
Query: 512 LGIELVNNQT 521
LG NN T
Sbjct: 359 LG----NNST 364
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 23/326 (7%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G +++ +T G +YS G+N GQLGH + R + I L + A G
Sbjct: 67 EIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRK--RLQLILGLDAFVFKKVACG 124
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 264
A T+ +++ GQ++++G +S E + G+ + SP++V++L +VQ A G
Sbjct: 125 AYHTIAVNEWGQLFSWGSNS--EGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHAL 182
Query: 265 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ G +Y++ ++ +LG + ++V+P L+ TL +P+ IA G + ++A
Sbjct: 183 ALTNNGELYSWGSNSEGQLGLGVDIRSEVKP-KLINTLAGVPIAFIACGGYH--SIAISK 239
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQDGRV 382
SG A++ G G+LG D ++ L Q Q L N + A G + + DG V
Sbjct: 240 SG-AIFGWGKNTFGQLG---LNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGV 295
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGE 441
T G G YG LGHG+ E +P+ V L ++ G +T +V G VY++G G
Sbjct: 296 FTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 355
Query: 442 SASLGHNAIADGQGNRHANVLTPQLV 467
+ LG+N+ ++ TPQ+V
Sbjct: 356 AGQLGNNST--------RSIPTPQVV 373
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 156 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTMLI 212
H+ AVT G +YS+G +++ G LGHG W P+ + L+G+R+ A G T L+
Sbjct: 375 HACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALV 434
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 266
+ G ++ FG +FG G K SP+ VESLK + V+AA G + TA +
Sbjct: 435 TTTGLLFTFGDGTFGV--LGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 492
Query: 267 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
G+++T+ G RLGH + + P + L + Q+A GY +AL
Sbjct: 493 SSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVP-TCVAALVDHNFRQVACGYSLTVALT 551
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+ V+++G G+LG + D K P L+E +L+ +A GA H AV+ +
Sbjct: 552 TK---GGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVLTHNS 606
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ E + P +V+AL + + +A G T +
Sbjct: 607 EVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAI 654
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 154/342 (45%), Gaps = 40/342 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + A G L++ G+V+ +G++S G +GV V+ PQLVE+
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 360
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L + A G + ++ G +Y SWG N LGH + + P + G LE
Sbjct: 361 LASSTTEVVACGEYHACAVTLSGDLY--SWGDGTHNLGLLGHGNDISHWIPKRVNGPLEG 418
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V IA G + + +G+ +++ G G G LGH R PR +E L L+
Sbjct: 419 LRVASIACGPWHTALVTT--TGL-LFTFGDGTFGVLGHNDRKSAYSPREVE--SLKGLRT 473
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 474 VRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALV 533
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
D VA G T ++ G V++ G LG + ADG+ P LV
Sbjct: 534 DHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLG-DPQADGK--------LPGLVEG-- 582
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++V+ + + H LT + ++Y +G G G+LG
Sbjct: 583 ----KLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLG 620
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VT+ G++++FG + G LGH + + PR + SL+G+R ++AA G T +
Sbjct: 427 GPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAV 486
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + +LV P V +L + Q A G
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV--PTCVAALVDHNFRQVACGY 544
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ +G V+T +LG + + P + G L V IA G ++ L
Sbjct: 545 SLTVALTTKGGVFTMGSSTYGQLG-DPQADGKLPGLVEGKLVEAYVEDIACGAHHVAVLT 603
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
VY+ G G G+LGHG D P L+E + ++ + AA H +
Sbjct: 604 ---HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAICLHKWL 660
Query: 376 VGQDGRVCT 384
G D C+
Sbjct: 661 SGADQNACS 669
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 216
+ VT V+ G N SG LG G + P+ + SL G +I + G+G +L ++ G
Sbjct: 76 LYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 135
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+VY +G +++ + G LV Q+ +L N V++ A G+ + VL+ +G VYT+
Sbjct: 136 EVYTWGHNAYSQLGNGTTNHGLVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG 194
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+ N ++G + N P + L+N VV IA G + ++A +G VY G
Sbjct: 195 YNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACG--QMCSMAVVENG-EVYVWGYNGN 251
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LG GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG G
Sbjct: 252 GQLGLGSSGNQPTPCRIAALQGIRVQR--VACGCAHTLVLTDEGQIYAWGANSYGQLGTG 309
Query: 397 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
N+ +S P V D V I +T+ ++ G VY +G C G+S L H
Sbjct: 310 NKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 363
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T +G VY++G N+ QLG+GTT P + + L ++I+ A G+ +M
Sbjct: 124 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSM 182
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 183 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKVVVNIACGQMCSMAVVEN 240
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A G + L L + +
Sbjct: 241 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ---I 295
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G+LG G+++++ +P + + ++ + A +A Q G+V WG
Sbjct: 296 YAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIE-IAACHSAHTSAAKTQSGQVYMWGQC 354
Query: 389 R 389
R
Sbjct: 355 R 355
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 207
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 173 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQM 232
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + + G+VY +G + G+ G G + +P + +L+ I V + A G T VL+
Sbjct: 233 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLT 290
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
EG++Y + + +LG + N + +P T++ V++IAA
Sbjct: 291 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVTVDKDRVIEIAA 332
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P + L+N + + VA G+ H+ V+ DG V TWG+
Sbjct: 137 VYTWGHNAYSQLGNGTTNHGLVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 195
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + +++A G + V E+G+VY +G + LG
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 255
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + + V AHT LT+ G++YA+GA
Sbjct: 256 LGS--------SGNQPTPCRIAALQGIRVQRVACGC-------AHTLVLTDEGQIYAWGA 300
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V +D
Sbjct: 301 NSYGQLG---TGNKSNQSYPTTVTVD 323
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E+ +L+ Q V + V ++ V G GCLG G+ + PK + +L
Sbjct: 57 EELKLIR-QACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGK 115
Query: 414 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 471
K ++ G V+ +E+G+VY++ GHNA + G G + ++ Q+ T+L
Sbjct: 116 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGLVPCQVSTNL- 166
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
VN++V++++ + H+ LT G++Y +G + GQ+G NQ
Sbjct: 167 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 209
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V+ P+L+++
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 158
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 159 LSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG 216
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + A S +++ G G G LGHG R PR +E + L+
Sbjct: 217 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK--GLRT 271
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E + VP V AL
Sbjct: 272 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALV 331
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G +A+ GN A+ + P V
Sbjct: 332 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNTQADGMLPVRV---- 378
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 379 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 418
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG E PR + SL+G+R ++AA G T +
Sbjct: 225 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAV 284
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV P V +L Q A G+
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGH 342
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG +T+ + + P + G L V +I+ G ++ L
Sbjct: 343 CLTVALTTSGHVYTMGSAVYGQLG-NTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 401
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 402 ---SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 458
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 459 SGVDQSMCS 467
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I +L + I A G T +
Sbjct: 118 GGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAV 177
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 178 TLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQ 237
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 238 LFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNC 297
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L Q+A G+C +AL +
Sbjct: 298 SSGKIFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 353
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ ++ D P +E N ++ GA+H AV+ V TWG
Sbjct: 354 VYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 411
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG+ + ++ P +V+AL D + V G
Sbjct: 412 GANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCG 445
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G A+++++G +Y SWG ++ RLGH + DV L+
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVD-CDVSQPKLID 157
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L ++ + +A G + A+ + + G G LGHG+ P+ + L
Sbjct: 158 ALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG-PLE 215
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ E SVP+ V++L ++ + A
Sbjct: 216 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 275
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ A L P V
Sbjct: 276 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKEAK-LVPTCV 327
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 328 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NTQADGMLPV 376
Query: 528 RVDIDL 533
RV+ L
Sbjct: 377 RVEGKL 382
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 166/325 (51%), Gaps = 31/325 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 210
+G H++ + + G V+S GSN +G+LG G +E + P+ +RIIQ +AG +M
Sbjct: 54 SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSM 113
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+SD G+++A+G +S G + + G L++ +P+ V SL VQ A G T L+
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGG 169
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
GRV+ + +D R+ H P +VE ++P++QI+AG + +AL SG ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNLFTMALTA--SG-TLF 218
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+ + D +PR + VVV G H+ + +GRV + G
Sbjct: 219 AWGRNEEGQLGNFTNRDVINPREVPNIN----SVVVVECGDSHSIALTHEGRVFSCGSDS 274
Query: 390 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G ++ + + + +A G T VV+ +G +++FG + LGH
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH- 332
Query: 449 AIADGQGNRHANVLTPQLVTSLKQV 473
GN N +TP+++ S++ V
Sbjct: 333 ------GNTR-NQITPRMIDSVENV 350
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 27/301 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q AG HS+AV+ G ++++GSNS GQL G P+ + SL +Q A GA
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP--ETVQVACGAS 161
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ ++ G+V+ +G+ S G + SP VE ++ ++Q + GN FT L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVELFVSVPIIQISAGNLFTMALT 212
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 326
G ++ + + +LG+ T + + P + NI VV + G + +AL +
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR----EVPNINSVVVVECGDSHSIALTHEGR-- 266
Query: 327 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V+S G G+LG G SR+ + E +L +A G H VV +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPSRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+G G LGHGN + P+++ ++ +V ++ A D + + Y G S+S
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRMIDSVENVASV-FAGWDQSFCLQIRTKHAYEVLSGPSSS 380
Query: 445 L 445
L
Sbjct: 381 L 381
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 41/339 (12%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIF 252
G+ + A+G T+ +++ G+V++ G + GE G +G+ + + +++
Sbjct: 45 HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--- 101
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 311
++Q + G + +S +GR+ F+WG+++ G D+ + ++P VQ+A
Sbjct: 102 IIQISAGRSHSMAVSDDGRL--FAWGSNSH-GQLAMSGDILISDTPKRVPSLPETVQVAC 158
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + ++L G V+ G G++ H P +E F +++ + ++AG
Sbjct: 159 GASHTVSLN---GGGRVFIWGQQSDGRIRHS-------PAEVELF--VSVPIIQISAGNL 206
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
+ G + WG G LG+ P+ V +N V + V GD + ++ +
Sbjct: 207 FTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSV--VVVECGDSHSIALTHE 264
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G V+S G LG GQ +R N + +T + + V +I+ H
Sbjct: 265 GRVFSCGSDSFGQLGC-----GQPSRSQNCMRG--ITEM--LGSHVTRIACGR-----CH 310
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
T + +GK++ FG GQLG NQ P +D
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQI---TPRMID 345
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 217 QVYAFGKDSFGEAEY----GVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 268
Q+Y FG S G+ + +++ P LV + V A G T L+
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64
Query: 269 EGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G+V++ + LG + +P+ + + ++QI+AG + +A++
Sbjct: 65 DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQISAGRSHSMAVS---DDGR 120
Query: 328 VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+++ G G+L S T ++ P L E Q VA GA H + GRV
Sbjct: 121 LFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ--------VACGASHTVSLNGGGRV 172
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG G + H P V+ V I ++ G+ T ++ G ++++G E
Sbjct: 173 FIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEE 225
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LG+ NR +V+ P+ V ++ V VV+ ++H+ ALT G+++
Sbjct: 226 GQLGNFT------NR--DVINPREVPNINSV--VVVECG-------DSHSIALTHEGRVF 268
Query: 503 AFGAGDKGQLG 513
+ G+ GQLG
Sbjct: 269 SCGSDSFGQLG 279
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 47/272 (17%)
Query: 271 RVYTFSWGNDARLGH--HTEPNDVE----PHPLLGT---LENIPVVQIAAGYCYLLALAC 321
++Y F +D +L ++ ND + PH + G + V +A+G + L LA
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA- 63
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQDG 380
+ V+S G G+LG G + + I + N ++ + ++AG H+ V DG
Sbjct: 64 --NDGKVWSCGSNYNGELGRGGVKEGSYT--IYPVHISNAVRIIQISAGRSHSMAVSDDG 119
Query: 381 RVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
R+ WG +G L G+ PK V +L + + VA G T ++ G V+ +G
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ 177
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ H +P V V+ ++QIS N T ALT SG
Sbjct: 178 QSDGRIRH---------------SPAEVELF--VSVPIIQISAGN-----LFTMALTASG 215
Query: 500 KLYAFGAGDKGQLGIELVNNQTERG--NPERV 529
L+A+G ++GQLG N T R NP V
Sbjct: 216 TLFAWGRNEEGQLG-----NFTNRDVINPREV 242
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 21/124 (16%)
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
VKA VA+G+ T ++ DG V+S G + LG + +G + + P +++
Sbjct: 49 VKA--VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-----SYTIYPVHISNAV- 100
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE---LVNNQTER--GNPE 527
R++QIS S H+ A+++ G+L+A+G+ GQL + L+++ +R PE
Sbjct: 101 ---RIIQISAGRS-----HSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE 152
Query: 528 RVDI 531
V +
Sbjct: 153 TVQV 156
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 130/277 (46%), Gaps = 32/277 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-------TKLVT 240
P P+R R++Q A G T LI+D +Y FG G +G + T
Sbjct: 1240 PPPLR-----RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFT 1294
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
S E ++ VV + G T V++ G +Y F WG RLG T +P
Sbjct: 1295 SLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLG--TGETGSSLYPSRVD 1352
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L NI V A G + LAL S V++ G G GG+LG+GS TDE+ P L+E + +
Sbjct: 1353 LRNIAAV--ACGREHTLALT---SKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYS 1407
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA----------L 410
+ V +AAG H+ + +DG V TWG+G G LGHG + +P +V +
Sbjct: 1408 I--VAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLI 1465
Query: 411 NDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+D+ + VA G Y T + DG +Y +G + LG
Sbjct: 1466 HDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLG 1502
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 28/280 (10%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-----LGTLENIP-- 305
VVQ A G TA+++ + +YTF G RLGH TE + +P P+ L E +
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305
Query: 306 -VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
VV ++ G + + + +Y G G G+LG G +P ++ L N+
Sbjct: 1306 GVVDVSCGREHTMVVTGNGD---LYGFGWGEAGRLGTGETGSSLYPSRVD---LRNI--A 1357
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
VA G H + GRV +G G G LG+G+E E +P +V+ L + + +A G+
Sbjct: 1358 AVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECH 1417
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---SLKQVNERVVQIS 481
+ +S DG+V ++G G S +LGH G R N L P LV + V + IS
Sbjct: 1418 SCALSRDGEVLTWGFGSSGALGH-------GTRD-NCLIPTLVDGPWTNPNVETLIHDIS 1469
Query: 482 LTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+ S+ + HT A T G LY +G GQLG E ++ Q
Sbjct: 1470 VVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQ 1509
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 31/316 (9%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI------RSLQGIR 198
R Q G H+ +T +Y+FG G+LGHGT E+ P P+ + +G+
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVE 1303
Query: 199 ---IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
++ + G TM+++ G +Y FG G G G+ L P V+ L+NI V
Sbjct: 1304 FGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLY--PSRVD-LRNIAAV- 1359
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G T L+ +GRV+ F G RLG+ +E ++ P L+ LE +V IAAG C+
Sbjct: 1360 -ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPF-LVEGLEEYSIVAIAAGECH 1417
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVV--------V 366
AL+ V + G G G LGHG+R + P L++ + N++ ++ V
Sbjct: 1418 SCALS---RDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSV 1474
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGD 422
A G++H DG + WG G LG + + + PK ++ +A G
Sbjct: 1475 ACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGT 1534
Query: 423 YTTFVVSEDGDVYSFG 438
+T+ V S G ++ +G
Sbjct: 1535 FTSAVCSTQGQLFMWG 1550
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
+ + +A G T ++++D +Y+FG GE LGH D T + +
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
VV +S HT +T +G LY FG G+ G+LG + P RVD+
Sbjct: 1305 GG-VVDVSCGRE-----HTMVVTGNGDLYGFGWGEAGRLGTGETGSSL---YPSRVDL 1353
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 42/342 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + + + A G+ ++++ GQ++++G+ S G+ +G V+ P+++++
Sbjct: 289 PKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADAD--VSQPKVIDA 346
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L VV A G F T ++ G +YT WG+D LGH + + P ++G +E+
Sbjct: 347 LSESNVVLVACGEFHTCAVTVSGNLYT--WGDDTHNTGYLGHGSAVSHWIPREVIGQIES 404
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ + ++ G + A++ Q +++ G G G LGHG R+ PR +E + L+
Sbjct: 405 VRISFVSCGPWHTAAVSSQGK---LFTFGDGTFGALGHGDRSSTSKPREVESLK--GLRT 459
Query: 364 VVVAAGAWHAAVV------------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
+ V+ G WH A V G++ TWG G G LGHG+EE VP V
Sbjct: 460 LKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPA 519
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
V VA T ++ G VY+ G + LG + + G+ H T
Sbjct: 520 GV--CQVACAHSMTIALTVLGQVYTMGAADYGQLG-SPCSVGKLPIH---------TDGD 567
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N + QI+ + H AL+ +G +Y +G G GQLG
Sbjct: 568 IRNCHIKQIACGSH-----HVVALSSNGDVYTWGKGINGQLG 604
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 38/350 (10%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
++Q IA G H++ VT +G ++S+G +S G+LGHG + +P+ I +L ++ A G
Sbjct: 299 DAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACG 358
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFT 263
T ++ +G +Y +G D+ G G+ + +++ ++++ + + G + T
Sbjct: 359 EFHTCAVTVSGNLYTWGDDTHNTGYLG-HGSAVSHWIPREVIGQIESVRISFVSCGPWHT 417
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 318
A +S +G+++TF G LGH + +P + +L+ + ++++ G + A
Sbjct: 418 AAVSSQGKLFTFGDGTFGALGHGDRSSTSKPRE-VESLKGLRTLKVSCGIWHTAAVIDFI 476
Query: 319 -----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
L SG +++ G G G+LGHG ++ PRL+ +++ V H+
Sbjct: 477 NESDRLDTSLSG-KLFTWGAGERGQLGHG----DEEPRLVP--SCVSMPAGVCQVACAHS 529
Query: 374 AVVGQD--GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH---VATGDYTTFVV 428
+ G+V T G YG LG C + D++ H +A G + +
Sbjct: 530 MTIALTVLGQVYTMGAADYGQLG---SPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVAL 586
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
S +GDVY++G G + LGH I D RH TP LV +LK + V
Sbjct: 587 SSNGDVYTWGKGINGQLGHGDIKD----RH----TPTLVKALKHKQVKSV 628
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 29/293 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRP-IRSLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G ++ +G LGHG+ W PR I ++ +RI + G T
Sbjct: 358 GEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHT 417
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+S G+++ FG +FG +G + + + P+ VESLK + ++ + G + TA +
Sbjct: 418 AAVSSQGKLFTFGDGTFGALGHGDRSS--TSKPREVESLKGLRTLKVSCGIWHTAAVIDF 475
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCY 315
S G+++T+ G +LGH D EP L+ + ++P V Q+A +
Sbjct: 476 INESDRLDTSLSGKLFTWGAGERGQLGH----GDEEPR-LVPSCVSMPAGVCQVACAHSM 530
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+AL VY++G G+LG K P + + N +A G+ H
Sbjct: 531 TIALTVLGQ---VYTMGAADYGQLGSPCSVG-KLP-IHTDGDIRNCHIKQIACGSHHVVA 585
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+ +G V TWG G G LGHG+ + P +V+AL + V G T V+
Sbjct: 586 LSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNFTAVI 638
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
R D P+ +++ L+ Q ++A G+ HA +V + G++ +WG G LGHG + S
Sbjct: 283 RMDALLPKALDRIAALDAQ--IIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQ 340
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PKV+ AL++ + VA G++ T V+ G++Y++G HN G G+ ++ +
Sbjct: 341 PKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWG-----DDTHNTGYLGHGSAVSHWIP 395
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+++ ++ V+IS + W HT A++ GKL+ FG G G LG
Sbjct: 396 REVIGQIES-----VRISFVSCGPW--HTAAVSSQGKLFTFGDGTFGALG 438
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +A++S G VY++G +GQLGHG ++ P +++L+ ++ G+
Sbjct: 575 QIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNF 634
Query: 209 TMLI 212
T +I
Sbjct: 635 TAVI 638
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++G LG+GT W P+ I L+G+++ A G T
Sbjct: 297 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHT 356
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
LIS GQ++ FG +FG +G + + ++ P+ V+SL + + A G + TA +
Sbjct: 357 ALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEV 414
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 415 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALIDYNFHKIACGHSITIG 473
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V++VG + G+LG+ D K P L+E +LL VA GA+H V+
Sbjct: 474 LTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTS 528
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V++L D +A G
Sbjct: 529 KNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 571
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 148/318 (46%), Gaps = 35/318 (11%)
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ +++ G+V+ +G+++ G G+ K VT P+LVE+L V A G F T ++
Sbjct: 249 SAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306
Query: 269 EGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G +YT+ G N LG+ T+ + P + G LE + V +A G + ++ S
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALIS---STG 363
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 378
+++ G G G LGHG + +PR ++ L L+ + VA G WH A V +
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDS--LTGLRTIAVACGVWHTAAVVEVIMTQSST 421
Query: 379 ---DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
G++ TWG G LGHG++E P V AL D +A G T ++ G V+
Sbjct: 422 SIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVF 481
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
+ G LG N HA+ P LV K + E +++ Y H L
Sbjct: 482 TVGSSVYGQLG---------NPHADGKQPCLVED-KLLGESAEEVAC--GAY---HVMVL 526
Query: 496 TESGKLYAFGAGDKGQLG 513
T ++Y +G G G+LG
Sbjct: 527 TSKNEVYTWGKGANGRLG 544
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ ++S G +++FG + G LGHG PR + SL G+R I A G T +
Sbjct: 352 GPWHTALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAV 411
Query: 213 SD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 412 VEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRL--KPTCVPALIDYNFHKIACGHS 469
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ G+V+T +LG + + +P + L ++A G +++ L
Sbjct: 470 ITIGLTTSGQVFTVGSSVYGQLG-NPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLT- 527
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P L+E + +++ ++A G+ ++A +
Sbjct: 528 --SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVK--IIACGSNYSAAI 578
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H+A+V + G V TWG G LG G + + P++V+AL VA G++ T V+ D
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G++Y++G G HNA G G ++ + P+ ++ + + +Q++ W H
Sbjct: 308 GELYTWGDGV-----HNAGLLGNGTDVSHWM-PKRISGILE----GLQVAYVACGPW--H 355
Query: 492 TFALTESGKLYAFGAGDKGQLG 513
T ++ +G+L+ FG G G LG
Sbjct: 356 TALISSTGQLFTFGDGTFGVLG 377
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
E+++ +A G H + +TSK VY++G ++G+LGHG E+ P + SL+ + A
Sbjct: 511 ESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 570
Query: 205 GAGRTMLI 212
G+ + I
Sbjct: 571 GSNYSAAI 578
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H AVT G +Y++G ++S G LGHG W P+ + L+ +R+ A G T
Sbjct: 369 GEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHT 428
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG G + SP+ VESLK + V+AA G + TA +
Sbjct: 429 AVVTTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEV 486
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + L + ++A G+ +
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAALVDHNFRKVACGHSLTV 545
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + V+++G + G+LG + D K P ++E +L++ +A GA H A V
Sbjct: 546 ALTTKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG++E + P +V+AL + + +A G T V
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAV 651
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 157/359 (43%), Gaps = 43/359 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+V+ +G++S G +GV V+ PQLVE+
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 357
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L + A G + ++ G +YT WG+ LGH + + P + G LE
Sbjct: 358 LASSTTEVVACGEYHGCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V IA G + A + +++ G G G LGH R PR +E + L+
Sbjct: 416 VRVASIACGPWHT---AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLK--GLRT 470
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 471 VRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALV 530
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
D VA G T ++ G+V++ G LG + ADG+ P +V
Sbjct: 531 DHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLG-DPQADGK--------LPGMVEG-- 579
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
R+V + + H +T ++Y +G G G+LG +Q +R P V+
Sbjct: 580 ----RLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGH---GDQEDRNTPTLVE 631
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VT+ G +++FG + G LGH + + PR + SL+G+R ++AA G T +
Sbjct: 424 GPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAV 483
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + +LV P V +L + + A G+
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGH 541
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ +G V+T +LG + + P + G L + V IA G + +A
Sbjct: 542 SLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMVEGRLVDAYVEDIACGAHH---VA 597
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
C VY+ G G G+LGHG + D P L+E + ++ + AA H +
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWL 657
Query: 376 VGQDGRVCT 384
G D C+
Sbjct: 658 SGADQNACS 666
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G Y+ + SV G GG + D P+ +E +L++Q VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAM----NLDAPLPKALESAIVLDVQ--YVACG 317
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
HAA+V + G V TWG G LGHG + S P++V+AL VA G+Y V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
GD+Y++G G H+ G GN ++ + ++ L++V RV I+ W
Sbjct: 378 LSGDLYTWGDGT-----HSLGLLGHGNDISHWIPKRVNGPLEEV--RVASIACGP---W- 426
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
HT +T +G+L+ FG G G LG
Sbjct: 427 -HTAVVTTAGQLFTFGDGTFGVLG 449
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 40/370 (10%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
TS ++ +G L HG + PR + + I + A G +++ G+V
Sbjct: 177 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 236
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
+++G D+ G + V + V+ P+++ESL + V A G T +S G +Y WG
Sbjct: 237 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 292
Query: 279 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
G + + PH L G L+ I +++IA G+ + ++ S +++ G G
Sbjct: 293 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQIFTYGDG 349
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ----------DGRVCT 384
G LGHG P+ +E L ++ +A G WH A + + G++ T
Sbjct: 350 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 407
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LGH +++ + VP V+ LND V+ T V++ G V++ G E
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+ D T + E V +IS +S H LT +GK++ +
Sbjct: 468 LGNPLSED----------TSICLIEGPLKTEFVREISSGSS-----HIAVLTMNGKVFTW 512
Query: 505 GAGDKGQLGI 514
G G +GQLG+
Sbjct: 513 GKGTEGQLGL 522
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 146/300 (48%), Gaps = 34/300 (11%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAA 204
+AIA G H+ AV+ G +Y +G + G G +W P + L GI I++ A
Sbjct: 270 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 329
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T +IS AGQ++ +G +FG +G T V P+ VESLK + A G + TA
Sbjct: 330 GHWHTAIISSAGQIFTYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 387
Query: 265 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 309
++ R G V + F+WG+ R LGH + P VEP L + Q+
Sbjct: 388 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 441
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 368
+ + L +G+ V+++G G+LG+ +++ LIE L + V +++
Sbjct: 442 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 495
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G+ H AV+ +G+V TWG G G LG G+ S P +V+AL D + +A G T +
Sbjct: 496 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q +I +T GVV++ GS G+LG+ +E+ L+ + + ++G+
Sbjct: 439 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 498
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ G+V+ +GK + E + G+ + P LVE+L++ V A G FT +
Sbjct: 499 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 151/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G+VY++G++S G +GV V P+L+++
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLIDA 359
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WGN GH E + P L G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGNGTFNFGLSGHGNEVSHWMPKRLNGPLEG 417
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + + S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWHTAVVT---SAGQLFTFGDGSFGVLGHGDRQSISVPREVE--SLKGLRT 472
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V +L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLV 532
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G LG N ADG + P V
Sbjct: 533 EPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG-NPQADG--------MVPARV---- 579
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG + PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + T+LV P V SL Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV--PTCVASLVEPNFCQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
FT L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CFTVALTTSGHVYTMGSSVYGQLG-NPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGVDQSMCS 668
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G VYS+G S G+LGHG + +P+ I +L + I A G T +
Sbjct: 319 GGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAV 378
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 379 TLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G + ++ P+ VESLK + V+AA G + TA +
Sbjct: 439 LFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 498
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + +L Q+A G+C+ +AL +
Sbjct: 499 SSGKIFTWGDGDKGRLGHGDKETRLVP-TCVASLVEPNFCQVACGHCFTVALT---TSGH 554
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 555 VYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 612
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG+ + + P +V+AL D + V G
Sbjct: 613 GANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G +++++G VY SWG ++ RLGH + + +P L+
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVY--SWGEESGGRLGHGVDCDVPQPK-LID 358
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L ++ + +A G + A+ + + G G GHG+ P+ + L
Sbjct: 359 ALAHMNIELVACGEYHTCAVTLS-GDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNG-PLE 416
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH AVV G++ T+G G +G LGHG+ + SVP+ V++L ++ + A
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAA 476
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ L P V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKETR-LVPTCV 528
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
SL + N Q++ + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 529 ASLVEPN--FCQVACGHCF-----TVALTTSGHVYTMGSSVYGQLG----NPQADGMVPA 577
Query: 528 RVDIDL 533
RV+ L
Sbjct: 578 RVEGKL 583
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + +P + +L I+ + G T+ +
Sbjct: 42 GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D GQV+++G +G+ + + P+ ++SL ++ +VQ A G+ + LS++ +
Sbjct: 100 NDKGQVFSWGHAVYGQIGLST-AEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDI 158
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
FSWG + +LG E + +L IP IAAG + AL SG A++
Sbjct: 159 --FSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFG 213
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG TD P L++ L Q ++ + G H A + ++G V T+G G
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKS---LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 32/351 (9%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR + G+ T+ + D G VY G +
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 284
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ ++G
Sbjct: 64 GQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIG 117
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
T + + +L ++ +VQ+A G+ + LAL+ ++S G G+LG G
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSD---IFSWGQNQYGQLGLGLE 174
Query: 345 TD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
E PR I+ L + +AAG H+ + G + WG ++G LG +E +V
Sbjct: 175 IKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P ++++L K IH+ G+ T ++++G V++FG G LGHN+ N N
Sbjct: 233 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN--- 284
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
P+ V L + V QI+ HT A SG++Y+FG G GQLG
Sbjct: 285 PRKVFEL--MGSIVTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ ++S+G N GQLG G ++E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G ++ +G++ FG+ G+ P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFGQL--GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ ++V P + + +I V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS + K P
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSP 338
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG V+S+G GQ+G T EE R PR I+SL ++I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S ++++G++ +G+ G++ K +P+ ++SL I A G + L+ G
Sbjct: 152 LSKDSDIFSWGQNQYGQLGLGLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG T+ D LL +L + ++ I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLG-LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S E +PR + F+L+ +A G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTINRKSPFTVK 342
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 270
++ G V+ FG +G+ G T +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYGQL--GHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 314
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
R+Y+F G + +LG + N P + G
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGN 344
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 13/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + +P + +L I+ + G T+ +
Sbjct: 42 GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D GQV+++G +G+ + + P+ ++SL ++ +VQ A G+ + LS++ +
Sbjct: 100 NDKGQVFSWGHAVYGQIGLST-AEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDI 158
Query: 273 YTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
FSWG + +LG E + +L IP IAAG + AL SG A++
Sbjct: 159 --FSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTI--SG-AIFG 213
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG TD P L++ L + + + + G H A + ++G V T+G G Y
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLK--SLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
G LGH + E P+ V L +A G +T V G +YSFG G + LG
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 32/351 (9%)
Query: 169 FGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR + G+ T+ + D G VY G +
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG 284
G+ + K P+ V +L +V + G T L+ +G+V FSWG+ ++G
Sbjct: 64 GQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIG 117
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
T + + +L ++ +VQ+A G+ + LAL+ ++S G G+LG G
Sbjct: 118 LSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLE 174
Query: 345 TD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
E PR I+ L + +AAG H+ + G + WG ++G LG +E +V
Sbjct: 175 IKKECAPRHIKS--LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P ++++L K IH+ G+ T ++++G V++FG G LGHN+ N N
Sbjct: 233 PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN--- 284
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
P+ V L + V QI+ HT A SG++Y+FG G GQLG
Sbjct: 285 PRKVFEL--MGSIVTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLG 328
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ ++S+G N GQLG G ++E PR I+SL GI AAG G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ +G ++ +G++ FG + G+ P L++SL++ ++ G TA L+
Sbjct: 201 HSFALTISGAIFGWGRNKFG--QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ ++V P + + +I V QIA G + LA PS
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI-VTQIACGRQHTLAFV--PSSGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS + K P
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSP 338
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTML 211
G H++A+ KG V+S+G GQ+G T EE R PR I+SL ++I+Q A G ++
Sbjct: 92 GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S ++++G++ +G+ G++ K +P+ ++SL I A G + L+ G
Sbjct: 152 LSKDSDIFSWGQNQYGQLGLGLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ F WG + +LG T+ D LL +L + ++ I G + AL + V+
Sbjct: 211 I--FGWGRNKFGQLG-LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEG---GVF 264
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S E +PR + F+L+ +A G H A V GR+ ++G G
Sbjct: 265 TFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 322
Query: 389 RYGCLGHGNEECESVPKVVQ 408
G LG G+ P V+
Sbjct: 323 GNGQLGTGSTINRKSPFTVK 342
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS A+T G ++ +G N GQLG + P ++SL+ +II G T
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREG 270
++ G V+ FG +G + G T +P+ V L V Q A G T A + G
Sbjct: 257 LTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSG 314
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLG---TLENIPVVQIAAGYCYLL 317
R+Y+F G + +LG + N P + G T E+ A CY L
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEANGCYCL 364
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 167/325 (51%), Gaps = 31/325 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 210
+G H++ + + G V+S GSN +G+LG G +E + P+ +RIIQ +AG +M
Sbjct: 54 SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSM 113
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+SD G+++A+G +S G + + G L++ +P+ V SL VQ A G T L+
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGG 169
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
GRV+ + +D R+ H P +VE ++P++QI+AG + +AL SG ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNLFTMALTA--SG-TLF 218
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+ + D +PR + + VVV G H+ + +GRV + G
Sbjct: 219 AWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSIALTHEGRVFSCGSDS 274
Query: 390 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G ++ + + + +A G T VV+ +G +++FG + LGH
Sbjct: 275 FGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH- 332
Query: 449 AIADGQGNRHANVLTPQLVTSLKQV 473
GN N +TP+++ S++ V
Sbjct: 333 ------GNTR-NQITPRMIDSVENV 350
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 27/301 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q AG HS+AV+ G ++++GSNS GQL G P+ + SL +Q A GA
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLP--ETVQVACGAS 161
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ ++ G+V+ +G+ S G + SP VE ++ ++Q + GN FT L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVELFVSVPIIQISAGNLFTMALT 212
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 326
G ++ + + +LG+ T + + P + NI VV + G + +AL +
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR----EVPNINSVVVVECGDSHSIALTHEGR-- 266
Query: 327 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V+S G G+LG G SR+ + E +L +A G H VV +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPSRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+G G LGHGN + P+++ ++ +V ++ A D + + Y G S+S
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRMIDSVENVASV-FAGWDQSFCLQIRTKHAYEVLSGPSSS 380
Query: 445 L 445
L
Sbjct: 381 L 381
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 41/339 (12%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIF 252
G+ + A+G T+ +++ G+V++ G + GE G +G+ + + +++
Sbjct: 45 HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--- 101
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 311
++Q + G + +S +GR+ F+WG+++ G D+ + ++P VQ+A
Sbjct: 102 IIQISAGRSHSMAVSDDGRL--FAWGSNSH-GQLAMSGDILISDTPKRVPSLPETVQVAC 158
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + ++L G V+ G G++ H P +E F +++ + ++AG
Sbjct: 159 GASHTVSLN---GGGRVFIWGQQSDGRIRHS-------PAEVELF--VSVPIIQISAGNL 206
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
+ G + WG G LG+ P+ V +N V + V GD + ++ +
Sbjct: 207 FTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSV--VVVECGDSHSIALTHE 264
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G V+S G LG GQ +R N + +T + + V +I+ H
Sbjct: 265 GRVFSCGSDSFGQLGC-----GQPSRSQNCMRG--ITEM--LGSHVTRIACGR-----CH 310
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
T + +GK++ FG GQLG NQ P +D
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQI---TPRMID 345
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 217 QVYAFGKDSFGEAEY----GVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 268
Q+Y FG S G+ + +++ P LV + V A G T L+
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64
Query: 269 EGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G+V++ + LG + +P+ + + ++QI+AG + +A++
Sbjct: 65 DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQISAGRSHSMAVS---DDGR 120
Query: 328 VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+++ G G+L S T ++ P L E Q VA GA H + GRV
Sbjct: 121 LFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ--------VACGASHTVSLNGGGRV 172
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG G + H P V+ V I ++ G+ T ++ G ++++G E
Sbjct: 173 FIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEE 225
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LG+ NR +V+ P+ V ++ V VV+ ++H+ ALT G+++
Sbjct: 226 GQLGNFT------NR--DVINPREVPNINSV--VVVECG-------DSHSIALTHEGRVF 268
Query: 503 AFGAGDKGQLG 513
+ G+ GQLG
Sbjct: 269 SCGSDSFGQLG 279
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 47/272 (17%)
Query: 271 RVYTFSWGNDARLGH--HTEPNDVE----PHPLLGT---LENIPVVQIAAGYCYLLALAC 321
++Y F +D +L ++ ND + PH + G + V +A+G + L LA
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA- 63
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQDG 380
+ V+S G G+LG G + + I + N ++ + ++AG H+ V DG
Sbjct: 64 --NDGKVWSCGSNYNGELGRGGVKEGSYT--IYPVHISNAVRIIQISAGRSHSMAVSDDG 119
Query: 381 RVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
R+ WG +G L G+ PK V +L + + VA G T ++ G V+ +G
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ 177
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ H +P V V+ ++QIS N T ALT SG
Sbjct: 178 QSDGRIRH---------------SPAEVELF--VSVPIIQISAGN-----LFTMALTASG 215
Query: 500 KLYAFGAGDKGQLGIELVNNQTERG--NPERV 529
L+A+G ++GQLG N T R NP V
Sbjct: 216 TLFAWGRNEEGQLG-----NFTNRDVINPREV 242
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 21/124 (16%)
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
VKA VA+G+ T ++ DG V+S G + LG + +G + + P +++
Sbjct: 49 VKA--VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-----SYTIYPVHISNAV- 100
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE---LVNNQTER--GNPE 527
R++QIS S H+ A+++ G+L+A+G+ GQL + L+++ +R PE
Sbjct: 101 ---RIIQISAGRS-----HSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE 152
Query: 528 RVDI 531
V +
Sbjct: 153 TVQV 156
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 165/356 (46%), Gaps = 28/356 (7%)
Query: 169 FGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G+ S GQLG G +EE PR G R+ G T + + G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + K P+ V +L +V + G T L+ +G+V+++ G+D +LG +
Sbjct: 64 GQLGH----EKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ + +L ++ V Q+A GY + LAL+ G ++S G G+LG G
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALS---KGGHIFSWGQNRYGQLGLGMTGQ 176
Query: 347 E-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
P+ ++ Q + +AAG H+ + G V WG ++G LG + P
Sbjct: 177 SISVPQHLQSLQ--GIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPA 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
+++AL + I+++ G+ T ++++G V++FG G LGHN+ N N P+
Sbjct: 235 LLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PR 286
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 520
V L + V QI+ HT A T SGK+ +FG G GQLG N+
Sbjct: 287 KVFEL--MGNVVTQIACGRQ-----HTLAFTPSSGKMDSFGLGGNGQLGTRSTCNR 335
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 15/298 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ + G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQIIVALSCGESHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D GQV+++G S G + G+ + + P+ ++SL ++ V Q A G + + LS+ G
Sbjct: 100 NDKGQVFSWGLGSDG--QLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGH 157
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+ FSWG + +LG + L +L+ IP QIAAG + AL SG AV+
Sbjct: 158 I--FSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTL--SG-AVF 212
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG D P L++ L + + + ++ G H A + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDTNDRCFPALLK--ALRSQRVIYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLG 446
YG LGH + E P+ V L +A G T + G + SFG G + LG
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 206
+Q G HS+A++ G ++S+G N GQLG G T + P+ ++SLQGI Q AAG
Sbjct: 140 AQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGG 199
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++ +G V+ +G++ FG + G+ T P L+++L++ V+ + G TA L
Sbjct: 200 AHSFALTLSGAVFGWGRNKFG--QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAAL 257
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
++EG V+TF G +LGH++ ++V P + + N+ V QIA G + LA PS
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV-VTQIACGRQHTLAFT--PSSG 314
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHP 350
+ S G G G+LG S + K P
Sbjct: 315 KMDSFGLGGNGQLGTRSTCNRKSP 338
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A+T G V+ +G N GQLG T + P +++L+ R+I + G
Sbjct: 193 AQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGED 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T ++ G V+ FG +G + G T +P+ V L V Q A G T A
Sbjct: 253 HTAALTKEGGVFTFGAGGYG--QLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFT 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G++ +F G + +LG + N P P+ G
Sbjct: 311 PSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKG 343
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAG 216
+ VT V+ G N SG LG G + P+ + SL G +I + G+G +L ++ G
Sbjct: 75 LYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEG 134
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+VY +G +++ + G LV Q+ +L N V++ A G+ + VL+ +G VYT+
Sbjct: 135 EVYTWGHNAYSQLGNGTTNHGLVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG 193
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+ N ++G + N P + L+N VV IA G + ++A +G VY G
Sbjct: 194 YNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACG--QMCSMAVVENG-EVYVWGYNGN 250
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LG GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG G
Sbjct: 251 GQLGLGSSGNQPTPCRIAALQGIRVQR--VACGCAHTLVLTDEGQIYAWGANSYGQLGTG 308
Query: 397 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
N+ +S P V D V I +T+ ++ G VY +G C G+S L H
Sbjct: 309 NKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 362
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 12/241 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T +G VY++G N+ QLG+GTT P + + L ++I+ A G+ +M
Sbjct: 123 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSM 181
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 182 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKVVVNIACGQMCSMAVVEN 239
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A G + L L + +
Sbjct: 240 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ---I 294
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G+LG G+++++ +P + + + A +A Q G+V WG
Sbjct: 295 YAWGANSYGQLGTGNKSNQSYPTTV-TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQC 353
Query: 389 R 389
R
Sbjct: 354 R 354
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 207
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 172 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQM 231
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + + G+VY +G + G+ G G + +P + +L+ I V + A G T VL+
Sbjct: 232 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGCAHTLVLT 289
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
EG++Y + + +LG + N + +P T++ VV+IAA
Sbjct: 290 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVTVDKDRVVEIAA 331
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P + L+N + + VA G+ H+ V+ DG V TWG+
Sbjct: 136 VYTWGHNAYSQLGNGTTNHGLVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 194
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + +++A G + V E+G+VY +G + LG
Sbjct: 195 NNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 254
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + + V AHT LT+ G++YA+GA
Sbjct: 255 LGS--------SGNQPTPCRIAALQGIRVQRVACGC-------AHTLVLTDEGQIYAWGA 299
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V +D
Sbjct: 300 NSYGQLG---TGNKSNQSYPTTVTVD 322
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E+ +L+ Q V + V ++ V G GCLG G+ + PK + +L
Sbjct: 56 EELKLIR-QACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGK 114
Query: 414 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 471
K ++ G V+ +E+G+VY++ GHNA + G G + ++ Q+ T+L
Sbjct: 115 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGLVPCQVSTNL- 165
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
VN++V++++ + H+ LT G++Y +G + GQ+G NQ
Sbjct: 166 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 208
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 162/364 (44%), Gaps = 36/364 (9%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG H+ ++ S G VYS+G GQLG+GT P + L +I G TM
Sbjct: 39 VAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLN--HVIDVHTGVRSTM 96
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+ +G + G+ G+ + P V L I V +G + + LS +G
Sbjct: 97 ALRSDGTVWTWGSNENGQ--LGIGTVTDMNVPGQVSGLSGIKAVSGGLG-YHSMALSEDG 153
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+T+ ++ LG+ T P + G + V IAAG + LAL + V++
Sbjct: 154 SVWTWGKNDNGELGNGTTLQQNTPVQVAGLND---VTAIAAGGYFSLALKSDGT---VWA 207
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G+ TD P Q+ L V+ +AAG H+ V QDG V WG
Sbjct: 208 WGVNGDGELGDGTTTDRYVP-----VQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNT 262
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LG G + P ++ L + A VA G Y + + G+V+S+G LG +
Sbjct: 263 YGTLGDGTRTNRTRPVQIKNLQHIVA--VAGGGYHSLALDRTGNVWSWGDNSQRQLGVGS 320
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+A+ L P V+ ++ V E H+ A+ + G ++ +G
Sbjct: 321 --------NASSLIPVPVSGIEHVREIAAG---------GFHSVAMKKDGTVWGWGFNGG 363
Query: 510 GQLG 513
GQLG
Sbjct: 364 GQLG 367
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 129/302 (42%), Gaps = 57/302 (18%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
++A+ S G V+++GSN +GQLG GT + P + L GI+ + G +M +S+ G
Sbjct: 95 TMALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGY-HSMALSEDG 153
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
V+ +GK+ GE G T +P V L ++ + A G +F+ L +G V+ +
Sbjct: 154 SVWTWGKNDNGELGNGT--TLQQNTPVQVAGLNDVTAIAA--GGYFSLALKSDGTVWAWG 209
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
D LG T + P + G + V+ IAAG + LA+ + V++ G
Sbjct: 210 VNGDGELGDGTTTDRYVPVQVAGLTD---VMAIAAGGSHSLAVTQDGT---VWAWGKNTY 263
Query: 337 GKLGHGSRTDEKHPRLIEQFQLL------------------------------------- 359
G LG G+RT+ P I+ Q +
Sbjct: 264 GTLGDGTRTNRTRPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNAS 323
Query: 360 NLQPVVV---------AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+L PV V AAG +H+ + +DG V WG+ G LG G P + +A+
Sbjct: 324 SLIPVPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTLTKAV 383
Query: 411 ND 412
D
Sbjct: 384 LD 385
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 32/266 (12%)
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + TA L G VY++ +G+ +LG+ T P G V+ + G +A
Sbjct: 41 GYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNH---VIDVHTGVRSTMA 97
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVV 376
L + V++ G G+LG G+ TD P Q+ L + +G +H+ +
Sbjct: 98 LRSDGT---VWTWGSNENGQLGIGTVTDMNVPG-----QVSGLSGIKAVSGGLGYHSMAL 149
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+DG V TWG G LG+G ++ P V LNDV AI A G Y + + DG V++
Sbjct: 150 SEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAI--AAGGYFSLALKSDGTVWA 207
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G LG D R+ V L V+ I+ S H+ A+T
Sbjct: 208 WGVNGDGELGDGTTTD----RYVPVQVAGLTD--------VMAIAAGGS-----HSLAVT 250
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+ G ++A+G G LG N+T
Sbjct: 251 QDGTVWAWGKNTYGTLGDGTRTNRTR 276
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ AG +H A + G V +WG+G G LG+G + P + + LN V +H TG +T
Sbjct: 38 LVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVH--TGVRST 95
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ DG V+++G E+ LG + D NV P V+ L + + V L
Sbjct: 96 MALRSDGTVWTWGSNENGQLGIGTVTD------MNV--PGQVSGLSGI--KAVSGGL--- 142
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
H+ AL+E G ++ +G D G+LG
Sbjct: 143 ---GYHSMALSEDGSVWTWGKNDNGELG 167
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AVT G V+++G N+ G LG GT RP I++LQ I+ A G ++
Sbjct: 241 AGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLA 298
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+++G +S + G + L+ P +E ++ I A G F + + ++G
Sbjct: 299 LDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGIEHVREI-----AAGGFHSVAMKKDG 353
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
V+ + + +LG T P L+ P
Sbjct: 354 TVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTTP 388
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 12/281 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H IA++S+G VYS+G G+LGHG RP+ I L G+ I+ A G +
Sbjct: 21 SGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAA 80
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 269
I+ AG +Y +GK +G +G +L P++VE+L++ V+ A G+ T ++ +
Sbjct: 81 ITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDD 138
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+++ G+ +LG +D PL + +L + VV++ G + +AL SG AV
Sbjct: 139 DNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT--RSG-AV 193
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y+ G G +LGHG+ + PR + Q + + +A G+ H G V TWG
Sbjct: 194 YTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIISIATGSLHCVACSDKGEVFTWGDN 251
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G LG G P++V AL K VA G T S
Sbjct: 252 DEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 292
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 21/274 (7%)
Query: 242 PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P L+ES++++F+ + A+ G LS EG VY++ G+D +LGH + + P L+
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPK-LIE 61
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L + +V IA G + A+ S +Y+ G G G+LGHG D+ P+++E Q
Sbjct: 62 DLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ V +G V D V +WG G YG LG G + VP + +L + + V
Sbjct: 119 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE 178
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G + ++ G VY++G G+ LGH +V P+ V +L+ ++++
Sbjct: 179 CGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIIS 228
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
I+ T S+ H A ++ G+++ +G D+GQLG
Sbjct: 229 IA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 257
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 8/285 (2%)
Query: 188 PRPIRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
P + S+Q + I + A +G + +S G VY++G+ G+ +G + + P+L+
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLI 60
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
E L + +V A G +A ++ G +YT+ G RLGH + + P ++ L++
Sbjct: 61 EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYK 119
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ +A G L C V+S G G GKLG G K P I+ L L V
Sbjct: 120 VIDVACGSGDAQTL-CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKID--SLAGLGVVK 176
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
V G+ + + + G V TWG G Y LGHG ++ P+ V AL K I +ATG
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
S+ G+V+++G + LG + R + L + +T +
Sbjct: 237 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRV 281
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +A + KG V+++G N GQLG GTT RPR + +LQG +I + A G+ T+
Sbjct: 232 GSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAW 291
Query: 213 SDA 215
S A
Sbjct: 292 STA 294
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 26/294 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++ G LGHG+ W P+ + ++GIR+ + GA T
Sbjct: 350 GEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHT 409
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---- 265
+++ AGQ++ FG SFG +G T P+ VE+L+ + + A G + TA
Sbjct: 410 AVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEA 467
Query: 266 ---LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
LS G ++YT+ G+ RLGH + P + +E + Q+A G
Sbjct: 468 INELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE-RICQVACGND 526
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
+AL + VY++G G+LG + + K P +E ++ N VA G++H A
Sbjct: 527 LTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EIANSFVEEVACGSYHVA 581
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V+ V TWG G G LGHG+ + P +V L D + +VA G T V+
Sbjct: 582 VLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 162/361 (44%), Gaps = 42/361 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+++++G++S G +GV+ V+ P+++++
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDT 338
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G + T ++ G +YT+ G N LGH +E + P + G +E I
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIR 398
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A S +++ G G G LGHG PR +E L L+
Sbjct: 399 VSYISCGAWH---TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTK 453
Query: 366 VAAGAWHAAVVGQ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
VA G WH A + ++ TWG G G LGHG+ E VP+ V AL
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
+ + VA G+ T ++ G VY+ G LG +A A+G+ P V
Sbjct: 514 IEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG-SATANGK--------LPTCVEG- 563
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ N V +++ + H LT ++Y +G G GQLG + R P VD
Sbjct: 564 EIANSFVEEVACG-----SYHVAVLTSKNEVYTWGKGLNGQLGH---GDNNHRNTPTIVD 615
Query: 531 I 531
+
Sbjct: 616 V 616
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 154/343 (44%), Gaps = 46/343 (13%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT +G ++S+G S G+LGHG + P+ I +L G + A G T +
Sbjct: 298 GGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLV-ESLKNIFVVQAAIGNFFTAVLSR 268
+ +G +Y +G G YG+ G S PQ V ++ I V + G + TAV++
Sbjct: 358 TLSGDLYTWGD---GTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTS 414
Query: 269 EGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLA----- 318
G+++TF G+ LGH P +VE TL + ++A G + A
Sbjct: 415 AGQLFTFGDGSFGALGHGDHITSNFPREVE------TLRGLRTTKVACGVWHTAAAVEAI 468
Query: 319 -------LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAG 369
+ PS +Y+ G G G+LGHG + PRL+ + L+ + VA G
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHG----DNEPRLVPECVAALIEERICQVACG 524
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 428
+ GRV T G YG LG + +P V+ + + VA G Y V+
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVL 583
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ +VY++G G + LGH N H N TP +V LK
Sbjct: 584 TSKNEVYTWGKGLNGQLGHG------DNNHRN--TPTIVDVLK 618
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
+G + S+ D P+ +E +L++ + A G HA +V + G + +WG G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HG E S PK++ L+ VA G+Y T V+ GD+Y++G G HN G
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGT-----HNYGLLGH 378
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G+ ++ + PQ V + +++S + W HT +T +G+L+ FG G G LG
Sbjct: 379 GSEVSHWI-PQKVGGQME----GIRVSYISCGAW--HTAVVTSAGQLFTFGDGSFGALG 430
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS + GQLG T + + + + A G+
Sbjct: 520 QVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYH 579
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK G+ +G + +P +V+ LK+ V A G+ FT V+
Sbjct: 580 VAVLTSKNEVYTWGKGLNGQLGHGDNNHR--NTPTIVDVLKDKQVKNVACGSKFTVVI 635
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 23/288 (7%)
Query: 156 HSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTMLI 212
H AVT G +Y++G ++S G LGHG W P+ + L+ +R+ A G T ++
Sbjct: 372 HGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVV 431
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------ 266
+ AGQ++ FG +FG G + SP+ VESLK + V+AA G + TA +
Sbjct: 432 TTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVG 489
Query: 267 ------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
G+++T+ G+ RLGH + + P + L + ++A G+ +AL
Sbjct: 490 SSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAALVDHNFRKVACGHSLTVALT 548
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+ V+++G + G+LG + D K P ++E +L++ +A GA H A V
Sbjct: 549 TKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVTLKS 603
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG++E + P +V+AL + + +A G T V
Sbjct: 604 EVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAV 651
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 47/361 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+V+ +G++S G +GV V+ PQLVE+
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 357
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L + A G + ++ G +YT WG+ LGH + + P + G LE
Sbjct: 358 LASSTTEVVACGEYHGCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415
Query: 304 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+ V IA G + ++ A Q +++ G G G LGH R PR +E L L
Sbjct: 416 VRVASIACGPWHTAVVTTAGQ-----LFTFGDGTFGVLGHNDRQSAYSPREVES--LKGL 468
Query: 362 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+ V A G WH A V + G++ TWG G G LGHG++E VP V A
Sbjct: 469 RTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAA 528
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L D VA G T ++ G+V++ G LG + ADG+ P +V
Sbjct: 529 LVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLG-DPQADGK--------LPGMVEG 579
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
R+V + + H +T ++Y +G G G+LG +Q +R P V
Sbjct: 580 ------RLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGH---GDQEDRNTPTLV 630
Query: 530 D 530
+
Sbjct: 631 E 631
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VT+ G +++FG + G LGH + + PR + SL+G+R ++AA G T +
Sbjct: 424 GPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAV 483
Query: 213 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ +G+++ +G G +G + +LV P V +L + + A G+
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGH 541
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ +G V+T +LG + + P + G L + V IA G + +A
Sbjct: 542 SLTVALTTKGEVFTMGSSMFGQLG-DPQADGKLPGMVEGRLVDAYVEDIACGAHH---VA 597
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
C VY+ G G G+LGHG + D P L+E + ++ + AA H +
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWL 657
Query: 376 VGQDGRVCT 384
G D C+
Sbjct: 658 SGADQNACS 666
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G Y+ + SV G GG + D P+ +E +L++Q VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAM----NLDAPLPKALESAIVLDVQ--YVACG 317
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
HAA+V + G V TWG G LGHG + S P++V+AL VA G+Y V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
GD+Y++G G H+ G GN ++ + ++ L++V RV I+ W
Sbjct: 378 LSGDLYTWGDGT-----HSLGLLGHGNDISHWIPKRVNGPLEEV--RVASIACGP---W- 426
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
HT +T +G+L+ FG G G LG
Sbjct: 427 -HTAVVTTAGQLFTFGDGTFGVLG 449
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 27/323 (8%)
Query: 175 GQLGHGTTEEEWRPRPIRSLQGIRI---IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 231
G+LG G + + RP+ IR +I + + G T+ I+ G++Y++G +G+ +
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503
Query: 232 GVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
G T+ SP+L+ ++ V Q A+G +A ++ EG +YT+ G+ RLGH +
Sbjct: 504 GNHVTQ--KSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561
Query: 291 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
P L+ + + V + + +++ V+S G G GKLGHG + P
Sbjct: 562 RSIP-TLVKDITGVGSVSCGSSFTVVIS----QDATTVWSFGAGDNGKLGHGDTSRVYRP 616
Query: 351 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQA 409
++I Q L ++ V A+ + + + G+V WG G CLG+G + VPK +
Sbjct: 617 KVISNLQGLLIRKVCCASQS--SLALTSIGQVFVWGSG--PCLGYGQADATFLVPKRLDE 672
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
D++ I +A GD ++ D DVYS+G S G GN ++ VL P+ VT
Sbjct: 673 FQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCG-------LGNNNSPVLLPRKVTG 725
Query: 470 LKQVNERVVQISL--TNSIYWNA 490
N + QIS+ ++SI W A
Sbjct: 726 FD--NHVIYQISVGTSHSIAWTA 746
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 149/302 (49%), Gaps = 11/302 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 206
Q G + + G V + G S G+LG G +++ R RPI +LQG + + A
Sbjct: 3441 QIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGL 3500
Query: 207 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++ +++ G+V+++G +G+ +G ++ P+ +E+L+ V+ A G+ +A+
Sbjct: 3501 EGHSLALTETGEVFSWGDGDYGKLGHG--NSERQRRPRQIEALRGEDVLHVACGHKHSAI 3558
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF + RLG N P + L+ I V IA G + + +
Sbjct: 3559 VTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHTVVVTTDRE- 3616
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+V++ G G G+LG G T + P+ ++ F LN++ + GA + ++G+V +
Sbjct: 3617 -SVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKK--ICCGARFTLALTKEGKVYSC 3673
Query: 386 GWGR-YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G R G + + P+ V AL++ +A G ++++GDV+S+G
Sbjct: 3674 GHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQ 3733
Query: 445 LG 446
LG
Sbjct: 3734 LG 3735
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 12/259 (4%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHS+A+T G V+S+G G+LGHG +E + RPR I +L+G ++ A G + +++
Sbjct: 3502 GHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTV 3561
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 273
G+++ FG G G K + P V +L+ I V A G T V++ + V+
Sbjct: 3562 DGKLFTFGASDLGRLGLGNTSNKKL--PAQVTALQPIMVELIACGANHTVVVTTDRESVW 3619
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
TF G +LG + P + + + +I G + LAL + VYS G
Sbjct: 3620 TFGEGEYGQLGLGRTTAKMTPQ-YVDAFSKLNIKKICCGARFTLALTKEGK---VYSCGH 3675
Query: 334 G-LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 391
G ++ + +P +Q L+ Q + +AAG HA + ++G V +WG G
Sbjct: 3676 NRCNGIFEVDTQHADYYP---QQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDG 3732
Query: 392 CLGHGNEECESVPKVVQAL 410
LG G + P ++ +L
Sbjct: 3733 QLGLGQTLPQREPCLISSL 3751
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 25/184 (13%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGRVCT 384
+YS G G GKLGHG+ +K P+LI L +Q VV A G H+A + +G + T
Sbjct: 490 IYSWGDGDYGKLGHGNHVTQKSPKLI----LGPMQGKVVRQIAVGYRHSAAITSEGLLYT 545
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESA 443
WG G YG LGHG+ S+P +V+ + V + V+ G T V+S+D V+SFG G++
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDITGVGS--VSCGSSFTVVISQDATTVWSFGAGDNG 603
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH G +R V P+++++L+ + R V + +S+ ALT G+++
Sbjct: 604 KLGH-----GDTSR---VYRPKVISNLQGLLIRKVCCASQSSL-------ALTSIGQVFV 648
Query: 504 FGAG 507
+G+G
Sbjct: 649 WGSG 652
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS VT G +++FG++ G+LG G T + P + +LQ I + A GA T+++
Sbjct: 3552 GHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVV 3611
Query: 213 -SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D V+ FG+ +G+ G K+ +PQ V++ + + + G FT L++EG+
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKM--TPQYVDAFSKLNIKKICCGARFTLALTKEGK 3669
Query: 272 VYTFSWGN-DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VY+ + T+ D P ++ E + IAAGY + LAL + V+S
Sbjct: 3670 VYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQF-IEDIAAGYEHALALTKEGD---VWS 3725
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
G G+LG G ++ P LI Q ++ ++AG H+A
Sbjct: 3726 WGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQ--ISAGHNHSA 3767
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 27/296 (9%)
Query: 136 LLAGEACCRRENSQAIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
L+ E C+ +N + G GH++A+ S G +YS+G G+LGHG + P+ I
Sbjct: 459 LIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGP 518
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
+QG + Q A G + I+ G +Y +G +G +G ++ + P LV+ + +
Sbjct: 519 MQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSI--PTLVKDITGVGS 576
Query: 254 VQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
V + G+ FT V+S++ V++F G++ +LGH P ++ L+ + + ++
Sbjct: 577 V--SCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRP-KVISNLQGLLIRKVCCA 633
Query: 313 YCYLLALACQPSGMAVYSVG----CGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVV 366
S +A+ S+G G G LG+G + D P+ +++FQ +LQ + +
Sbjct: 634 ---------SQSSLALTSIGQVFVWGSGPCLGYG-QADATFLVPKRLDEFQ--DLQIIDI 681
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATG 421
A G H + D V +WG G G GN +P+ V ++ ++ G
Sbjct: 682 AVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVG 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D R I Q + + + G H+ + + G V +WG
Sbjct: 3459 LACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGD 3518
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN E + P+ ++AL +HVA G + +V+ DG +++FG + L
Sbjct: 3519 GDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRL-- 3576
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
G GN +N P VT+L+ + ++ +++ T+ ++ FG G
Sbjct: 3577 -----GLGNT-SNKKLPAQVTALQPIMVELIACGANHTV------VVTTDRESVWTFGEG 3624
Query: 508 DKGQLGIELVNNQTERGNPERVD 530
+ GQLG+ T + P+ VD
Sbjct: 3625 EYGQLGL---GRTTAKMTPQYVD 3644
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 160/392 (40%), Gaps = 76/392 (19%)
Query: 176 QLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-AEYGVQ 234
QL T E E P P + II+ + +S + Y +G G+ AE G
Sbjct: 3368 QLITSTKENEILP-PWKLAMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESG-- 3424
Query: 235 GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 294
+LV P L S Q G+ T V+ +G V G+ RLG +
Sbjct: 3425 --RLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRL 3480
Query: 295 HPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
P+ L+ V ++A G+ +LA +G V+S G G GKLGHG+ ++
Sbjct: 3481 RPITA-LQGFVVTELATSTGLEGH----SLALTETG-EVFSWGDGDYGKLGHGNSERQRR 3534
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
PR IE + ++ + VA G H+A+V DG++ T+G G LG GN + +P V A
Sbjct: 3535 PRQIEALRGEDV--LHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA 3592
Query: 410 LNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L + +A G T VV+ D + V++FG GE LG R +TPQ V
Sbjct: 3593 LQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG--------RTTAKMTPQYVD 3644
Query: 469 SLKQVNER----------------------------VVQISLTNSIYW------------ 488
+ ++N + + ++ ++ Y+
Sbjct: 3645 AFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFI 3704
Query: 489 ------NAHTFALTESGKLYAFGAGDKGQLGI 514
H ALT+ G ++++G GQLG+
Sbjct: 3705 EDIAAGYEHALALTKEGDVWSWGNDTDGQLGL 3736
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG G +++ P+LI ++ +V + G+ H + DGR+ +WG G YG LGH
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503
Query: 396 GNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
GN + PK++ K + +A G + ++ +G +Y++G G+ LGH
Sbjct: 504 GNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGH------- 556
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G+ H+ + P LV + V S T I +A T +++FGAGD G+LG
Sbjct: 557 GDNHSRSI-PTLVKDITGVGSVSCGSSFTVVISQDATT--------VWSFGAGDNGKLG 606
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD- 224
V+SFG+ +G+LGHG T +RP+ I +LQG+ I + + ++ ++ GQV+ +G
Sbjct: 594 VWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGP 653
Query: 225 --SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
+G+A+ T LV P+ ++ +++ ++ A+G+ L+ + VY SWGN+A
Sbjct: 654 CLGYGQAD----ATFLV--PKRLDEFQDLQIIDIAVGDNHCLALTCDNDVY--SWGNNAS 705
Query: 283 ----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
LG++ P + P + G +N + QI+ G + +A P+ +
Sbjct: 706 GQCGLGNNNSPV-LLPRKVTG-FDNHVIYQISVGTSHSIAWTALPTDRCI 753
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESAS 444
G YG LG G+ ++ PK+++ ++ K ++ + D T ++ DG +YS+G G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH GN H +P+L+ Q + V QI++ H+ A+T G LY +
Sbjct: 501 LGH-------GN-HVTQKSPKLILGPMQ-GKVVRQIAVGYR-----HSAAITSEGLLYTW 546
Query: 505 GAGDKGQLG 513
G GD G+LG
Sbjct: 547 GDGDYGRLG 555
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG GR+G L P + + + K IH G +TFV+ DG V + G G
Sbjct: 3411 TWGGGRHGQLAESGRLVLQ-PTLTSSFSKAKQIHC--GHNSTFVIEHDGTVLACGEGSYG 3467
Query: 444 SLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
L GQGN P+L +T+L + V L S H+ ALTE+G++
Sbjct: 3468 RL-------GQGNSDD---LPRLRPITAL----QGFVVTELATSTGLEGHSLALTETGEV 3513
Query: 502 YAFGAGDKGQLGIELVNNQTERGNPER 528
+++G GD G+LG GN ER
Sbjct: 3514 FSWGDGDYGKLG---------HGNSER 3531
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
AG H++A+T +G V+S+G+++ GQLG G T + P I SLQG I Q +AG
Sbjct: 3709 AGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAG 3762
>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
Length = 2434
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 170/371 (45%), Gaps = 18/371 (4%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+S G NS G+LGHG T I SLQ IIQ AG T+ ++ G+V G +
Sbjct: 435 VWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYND 494
Query: 226 FGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
G+ G + + L P++ ++ I V A G T +++ +GR T + +L
Sbjct: 495 NGQCGQGGTARVSHLCEMPKMGDN--AISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA---VYSVGCGLGGKLG 340
GH ++ P ++ +LEN V ++ Y Y +AC+ G +Y+ G G+LG
Sbjct: 553 GHGNTASESVPK-IVRSLENRIVRLVSCSY-YHTVMACEEDGSGQQYLYTFGRNDYGQLG 610
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
H D K P+ +E + V VA G +H VV G+ +G YG LG + E
Sbjct: 611 HNDSIDRKVPQHVEAMG--DQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMEN 668
Query: 401 ESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+ VP V+A L + + + G Y T V+ +++FG + LG + + A
Sbjct: 669 QLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLG---LGRANASSTA 725
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
N+ Q S ++ E + + HT A++++G +Y FG + GQLG +
Sbjct: 726 NLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG---TGD 782
Query: 520 QTERGNPERVD 530
ER P +D
Sbjct: 783 TNERVYPFPID 793
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 24/298 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
A G H+I VT G + G N GQLGHG T E P+ +RSL+ + +
Sbjct: 524 HAYNGCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYH 583
Query: 209 TMLISD---AGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
T++ + +GQ +Y FG++ +G+ + + V PQ VE++ + VV A G + T
Sbjct: 584 TVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKV--PQHVEAMGDQHVVSVACGQYHT 641
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
V++ G+ + F + +LG + N + P + LE ++I GY + + L
Sbjct: 642 MVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLC--- 698
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDE------------KHPRLIEQFQLLNLQPVVVAAGAW 371
SG +++ G G+LG G + RLIE+ + ++ V A G +
Sbjct: 699 SGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDI--VRFACGCY 756
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H V +G + +G +G LG G+ P + + VA G Y T V++
Sbjct: 757 HTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVLT 814
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+V++ G++S+GE +G ++ S + +ESL+ ++Q GN T L+ +G+V T
Sbjct: 434 EVWSCGQNSYGELGHGDTASR--KSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491
Query: 277 W--------GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+ G AR+ H E P +G + + Q+ A + G A
Sbjct: 492 YNDNGQCGQGGTARVSHLCE------MPKMG---DNAISQVHAYNGCEHTILVTMDGRAA 542
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGR----VC 383
+ G G+LGHG+ E P+++ + N +V+ +H + +DG +
Sbjct: 543 -TCGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLY 599
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
T+G YG LGH + VP+ V+A+ D + VA G Y T VV+ G ++FG +
Sbjct: 600 TFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYG 659
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG +++ N L P V + + +E + + Y HT L L+A
Sbjct: 660 QLGIDSM--------ENQLVPVQVRAGLEKHE---CLEIRCGYY---HTIVLCSGAHLFA 705
Query: 504 FGAGDKGQLGIELVN 518
FG D GQLG+ N
Sbjct: 706 FGRNDYGQLGLGRAN 720
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++AV+ GV+Y FG N+ GQLG G T E P PI G R+ AAG T++++
Sbjct: 757 HTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVLTGG 816
Query: 216 GQVYAFGKDSFGEAE--------YGVQGTKLVTSPQLVESL 248
+ +D+ G + G+ T++++SP + E L
Sbjct: 817 KEDEKNDQDAAGNDKGEGSQSTASGITHTEILSSPSVQELL 857
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 61/203 (30%)
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
D V + G YG LGHG+ + +++L + I + G+ T ++ DG V + G
Sbjct: 432 DREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491
Query: 439 ------CG-----------ESASLGHNAIAD----------------------------- 452
CG E +G NAI+
Sbjct: 492 YNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQ 551
Query: 453 -GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK----LYAFGAG 507
G GN A+ P++V SL+ R+V S +++ A E G LY FG
Sbjct: 552 LGHGNT-ASESVPKIVRSLENRIVRLVSCSYYHTV------MACEEDGSGQQYLYTFGRN 604
Query: 508 DKGQLGIELVNNQTERGNPERVD 530
D GQLG N+ +R P+ V+
Sbjct: 605 DYGQLG---HNDSIDRKVPQHVE 624
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 40/370 (10%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
TS ++ +G L HG + PR + + I + A G +++ G+V
Sbjct: 165 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 224
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
+++G D+ G + V + V+ P+++ESL + V A G T +S G +Y WG
Sbjct: 225 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 280
Query: 279 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
G + + PH L G L+ I +++IA G+ + ++ S +++ G G
Sbjct: 281 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQLFAYGDG 337
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ----------DGRVCT 384
G LGHG P+ +E L ++ +A G WH A + + G++ T
Sbjct: 338 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 395
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LGH +++ + VP V+ LND V+ T V++ G V++ G E
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+ D T + E V +IS +S H LT +GK++ +
Sbjct: 456 LGNPLSED----------TSICLIEGPLKTEFVREISSGSS-----HIAVLTMNGKVFTW 500
Query: 505 GAGDKGQLGI 514
G G +GQLG+
Sbjct: 501 GKGTEGQLGL 510
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 34/300 (11%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAA 204
+AIA G H+ AV+ G +Y +G + G G +W P + L GI I++ A
Sbjct: 258 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 317
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T +IS AGQ++A+G +FG +G T V P+ VESLK + A G + TA
Sbjct: 318 GHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 375
Query: 265 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 309
++ R G V + F+WG+ R LGH + P VEP L + Q+
Sbjct: 376 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 429
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 368
+ + L +G+ V+++G G+LG+ +++ LIE L + V +++
Sbjct: 430 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 483
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G+ H AV+ +G+V TWG G G LG G+ S P +V+AL D + +A G T +
Sbjct: 484 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q +I +T GVV++ GS G+LG+ +E+ L+ + + ++G+
Sbjct: 427 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 486
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ G+V+ +GK + E + G+ + P LVE+L++ V A G FT +
Sbjct: 487 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 35/328 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ +L + I Q ++++ G+V+ S + PQ + +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTA 509
Query: 248 LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
L + V++ A G + A L+++ VY++ G+ RLGH EP L+ L+
Sbjct: 510 LDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGK 567
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
++ + G Y A++ + A+Y+ G G G+LGHG+ D P +I ++ V
Sbjct: 568 DIIDVECGGTYSAAIS---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+ H + G+V +WG G YG LG G + +P++++ L +VK + V G
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +SEDG VY++G GE LGH NV P++V L+ + +VV +SL
Sbjct: 685 SVALSEDGHVYTWGKGEGWKLGHPT--------EENVRFPEMVEVLR--DRKVVGVSLGV 734
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQL 512
S H ALT+ G++Y +G + Q+
Sbjct: 735 S-----HVLALTDQGEVYGWGKNENKQI 757
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H +A+T VYS+G+ G+LGHG T + P I++L+G II G + IS
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISAN 585
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF--TAVLSREGRVY 273
G +Y +G+ ++G +G L +P ++ +L + +++ A G+F+ T ++ +G+VY
Sbjct: 586 GALYTWGRGNYGRLGHGTAEDCL--TPTMISALSDEHIIKVACGSFYAHTLCITSQGKVY 643
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LG P L+ L+N+ +VQ+ G + +AL+ VY+ G
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALS---EDGHVYTWGK 699
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G KLGH + + + P ++E L + + V V+ G H + G V WG +
Sbjct: 700 GEGWKLGHPTEENVRFPEMVE--VLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+E P++++AL K + V G +F ++D +
Sbjct: 758 CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA--GRTM 210
G +S A+++ G +Y++G + G+LGHGT E+ P I +L II+ A G+ T+
Sbjct: 575 GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL 634
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
I+ G+VY++G +G+ G G+KL P+L+E L+N+ +VQ G F+ LS +
Sbjct: 635 CITSQGKVYSWGDGDYGKLGRGGSDGSKL---PRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VYT+ G +LGH TE N P ++ L + VV ++ G ++LAL Q VY
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPE-MVEVLRDRKVVGVSLGVSHVLALTDQGE---VY 747
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
G ++ S + PRLIE +
Sbjct: 748 GWGKNENKQICDSSELFVQQPRLIEALK 775
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 39/278 (14%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
PQ ++L + + Q + +L++ G+V+ + +D + + L
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQCPQE-----------MTAL 510
Query: 302 ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
++ V++IAA G YL AL VYS G G GG+LGHG + ++ P LI+ +
Sbjct: 511 DDKEVIKIAAHPEGKHYL-ALT---KDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKG 566
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
++ + V G ++A + +G + TWG G YG LGHG E P ++ AL+D I V
Sbjct: 567 KDI--IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624
Query: 419 ATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
A G + T ++ G VYS+G G+ LG +DG P+L+ L+ V +
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGG-SDGSK-------LPRLIEKLQNV--K 674
Query: 477 VVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 513
+VQ+ Y A + AL+E G +Y +G G+ +LG
Sbjct: 675 IVQV------YCGAQFSVALSEDGHVYTWGKGEGWKLG 706
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G S+A++ G VY++G +LGH T E P + L+ +++ + G
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIG 259
+ ++D G+VY +GK+ E + ++L V P+L+E+LK VV G
Sbjct: 737 VLALTDQGEVYGWGKN---ENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 173/394 (43%), Gaps = 40/394 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ GP + + S V+ +G L + T + P + S + + A G
Sbjct: 214 KTFEGPRAACRLDSLKDVFFWGDAFGSILDYDDTSKSL-PMLVDSTNMLDVQSIACGETH 272
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+I+ G+VY++G +S G G Q V+ P+LVES+ ++ V A G+ ++
Sbjct: 273 AAIITKQGEVYSWGNESSGG--IGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTV 330
Query: 269 EGRVYTFSWGNDARLGH-HTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G + F WG +G N++ PH L L+ I VV+IA G + + S
Sbjct: 331 SGEL--FEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIIT---SSG 385
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 378
+Y+ G G G LGHG P+ +E + ++ VA G WH A + +
Sbjct: 386 QLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVK--CVACGPWHTAAIVEVLSDFKSN 443
Query: 379 --DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++ TWG G LGH +++ + +P V +L D I V+ G T V+S G V++
Sbjct: 444 SPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFT 503
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G LG N HA+ T V L + E V IS +S H LT
Sbjct: 504 IGSSMHGQLG---------NPHADGRTVCAVEGLLKT-EFVRHISSGSS-----HVAVLT 548
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+GK++ +G G +GQLG+ + R P VD
Sbjct: 549 TNGKVFTWGKGKEGQLGL---GDYLNRSTPTLVD 579
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 155/346 (44%), Gaps = 77/346 (22%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-------------- 193
Q+IA G H+ +T +G VYS+G+ SSG +G+ + RP+ + S
Sbjct: 264 QSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSK 323
Query: 194 ---------------------------------------LQGIRIIQAAAGAGRTMLISD 214
L GI +++ A G T +I+
Sbjct: 324 HACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITS 383
Query: 215 AGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 266
+GQ+Y +G +FG +G QGT T P+ VE LK V A G + TA +
Sbjct: 384 SGQLYTYGDGTFGVLGHGDTQGT---TRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDF 440
Query: 267 -SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
S R F+WG+ R LGH + + P + +L + +Q++ G + L+
Sbjct: 441 KSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLTDYDFIQVSCGMALTVVLSI-- 497
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
+G+ V+++G + G+LG+ D + +E LL + V +++G+ H AV+ +G+V
Sbjct: 498 TGV-VFTIGSSMHGQLGN-PHADGRTVCAVE--GLLKTEFVRHISSGSSHVAVLTTNGKV 553
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
TWG G+ G LG G+ S P +V AL + ++ G +YT V
Sbjct: 554 FTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAV 599
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 35/303 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +Y++G + G LGHG T+ RP+ + L+G R+ A G T I
Sbjct: 374 GPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAI 433
Query: 213 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
S +++ +G G+ + + KL+ P V+SL + +Q + G
Sbjct: 434 VEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLI--PTCVDSLTDYDFIQVSCGMAL 491
Query: 263 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T VLS G V+T +LG+ H + V + G L+ V I++G ++ L
Sbjct: 492 TVVLSITGVVFTIGSSMHGQLGNPHADGRTV--CAVEGLLKTEFVRHISSGSSHVAVLT- 548
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVV 376
+ V++ G G G+LG G + P L++ + ++ + AA H +
Sbjct: 549 --TNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAVCLHKIIS 606
Query: 377 GQDGRVCT-----WGWGR--YGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 424
+D VC+ +G+ R + C G+ C S V + A + ++ V G ++
Sbjct: 607 RKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVARAALAPDKIRRYRVCDGCFS 666
Query: 425 TFV 427
+
Sbjct: 667 QLL 669
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG+++ VP V AL
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G +A+ GN A+ L P V
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 142/334 (42%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I SL + I A G T +
Sbjct: 319 GGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAV 378
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 379 TLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQ 438
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G ++ P+ VESLK + V+AA G + TA +
Sbjct: 439 LFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 498
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L Q+A G+C +AL +
Sbjct: 499 SSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 554
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 555 VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 612
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG + ++ P +V+AL D + V G
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGSDQSMCS 668
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G A+++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
+L ++ + +A G + A+ + + G G LGHG+ P+ ++ L
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ SVP+ V++L ++ + A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ + P V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577
Query: 528 RVDIDL 533
RV+ L
Sbjct: 578 RVEGKL 583
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
++ D P+ +E L++Q + + G HAA+V + G + +WG G LGHG + +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 460
PK++ +L + VA G+Y T V+ GD+Y++G G + LGH GN ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ ++ +S + W HT +T +G+L+ FG G G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 154/342 (45%), Gaps = 40/342 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+V+++G++ G +GV V P+LV+
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VLHPKLVDG 353
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
LKN V A G + + ++ G +YT WG N LG+ E ++ P L G LE
Sbjct: 354 LKNTNVELVACGEYHSCAVTLSGDLYT--WGGSSHNCGLLGYRNEASNWVPKKLNGPLEG 411
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V ++ G + + S +++ G G G LGHG R PR +E + L+
Sbjct: 412 IHVAAVSCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLK--GLRT 466
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG++E VP V AL
Sbjct: 467 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALV 526
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G LG N ADG+ P V
Sbjct: 527 EPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLG-NPQADGK--------LPVRVEG-- 575
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++++ V+ L Y H LT ++Y +G G G+LG
Sbjct: 576 KLSKNFVE-ELDCGAY---HVAVLTSRTEVYTWGKGANGRLG 613
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G S++ G LG+ W P+ + L+GI + + G T
Sbjct: 365 GEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHT 424
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ +GQ++ FG +FG +G + + V++P+ VESLK + V+AA G + TA +
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEV 482
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + + P + L Q+A G+ +
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHSMTV 541
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + VY++G + G+LG+ + D K P +E N + GA+H AV+
Sbjct: 542 ALT---TTGHVYTMGSPVYGQLGN-PQADGKLPVRVEGKLSKNFVEEL-DCGAYHVAVLT 596
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + S P +V+AL D + V G T +
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 48/312 (15%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G A+++++G V FSWG + RLGH + + + P L+
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEV--FSWGEELGGRLGHGVDSDVLHPK-LVD 352
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVG-----CGLGGKLGHGSRTDEKHPRLIE 354
L+N V +A G + A+ SG +Y+ G CGL LG+ + P+ +
Sbjct: 353 GLKNTNVELVACGEYHSCAVTL--SG-DLYTWGGSSHNCGL---LGYRNEASNWVPKKL- 405
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
L + V+ G WH AVV G++ T+G G +G LGHG+ S P+ V++L ++
Sbjct: 406 NGPLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLR 465
Query: 415 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+ A G + T V E G ++++G G+ LGH G++ + L
Sbjct: 466 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKESR-L 517
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P V +L + N Q++ +S+ T ALT +G +Y G+ GQLG N Q +
Sbjct: 518 VPTCVAALVEPN--FCQVACGHSM-----TVALTTTGHVYTMGSPVYGQLG----NPQAD 566
Query: 523 RGNPERVDIDLS 534
P RV+ LS
Sbjct: 567 GKLPVRVEGKLS 578
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++AA G T +
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAV 479
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + ++LV P V +L Q A G+
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGH 537
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + P + G L V ++ G ++ L
Sbjct: 538 SMTVALTTTGHVYTMGSPVYGQLG-NPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLT 596
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D P ++E + ++ VV AA H V
Sbjct: 597 ---SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAICLHKWV 653
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 654 SGIDQSMCS 662
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG+++ VP V AL
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G +A+ GN A+ L P V
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 142/334 (42%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I SL + I A G T +
Sbjct: 319 GGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAV 378
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 379 TLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQ 438
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G ++ P+ VESLK + V+AA G + TA +
Sbjct: 439 LFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 498
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L Q+A G+C +AL +
Sbjct: 499 SSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 554
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 555 VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 612
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG + ++ P +V+AL D + V G
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGSDQSMCS 668
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G A+++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
+L ++ + +A G + A+ + + G G LGHG+ P+ ++ L
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ SVP+ V++L ++ + A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ + P V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577
Query: 528 RVDIDL 533
RV+ L
Sbjct: 578 RVEGKL 583
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
++ D P+ +E L++Q + + G HAA+V + G + +WG G LGHG + +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 460
PK++ +L + VA G+Y T V+ GD+Y++G G + LGH GN ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ ++ +S + W HT +T +G+L+ FG G G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG+++ VP V AL
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G +A+ GN A+ L P V
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 142/334 (42%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I SL + I A G T +
Sbjct: 319 GGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAV 378
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 379 TLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQ 438
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G ++ P+ VESLK + V+AA G + TA +
Sbjct: 439 LFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 498
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L Q+A G+C +AL +
Sbjct: 499 SSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 554
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 555 VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 612
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG + ++ P +V+AL D + V G
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGSDQSMCS 668
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G A+++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
+L ++ + +A G + A+ + + G G LGHG+ P+ ++ L
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ SVP+ V++L ++ + A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ + P V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577
Query: 528 RVDIDL 533
RV+ L
Sbjct: 578 RVEGKL 583
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
++ D P+ +E L++Q + + G HAA+V + G + +WG G LGHG + +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 460
PK++ +L + VA G+Y T V+ GD+Y++G G + LGH GN ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ ++ +S + W HT +T +G+L+ FG G G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 42/343 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ + + + G L++ G++Y++G++S G +GV V P+L++S
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLEN 303
L ++ + A G + T ++ G +YT WG+ LGH + + P + G LE
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEG 417
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V I+ G + A S +++ G G G LGHG R PR +E L L+
Sbjct: 418 IHVSSISCGPWH---TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRT 472
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
V A G WH A V + G++ TWG G G LGHG+++ VP V AL
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALV 532
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G +A+ GN A+ L P V
Sbjct: 533 EPNFCQVACGHCLTVALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV---- 579
Query: 472 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
E + + I A H LT ++Y +G G G+LG
Sbjct: 580 ---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 619
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 142/334 (42%), Gaps = 71/334 (21%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G +YS+G S G+LGHG + +P+ I SL + I A G T +
Sbjct: 319 GGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAV 378
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+ +G +Y +G
Sbjct: 379 TLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQ 438
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------S 267
+FG+ +GV G ++ P+ VESLK + V+AA G + TA +
Sbjct: 439 LFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 498
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G+++T+ G+ RLGH + + P + L Q+A G+C +AL +
Sbjct: 499 SSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAALVEPNFCQVACGHCLTVALT---TSGH 554
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY++G + G+LG+ + D P +E N ++ GA+H AV+ V TWG
Sbjct: 555 VYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVE-EISCGAYHVAVLTSRTEVYTWGK 612
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G G LGHG + ++ P +V+AL D + V G
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG S G LGHG PR + SL+G+R ++AA G T +
Sbjct: 426 GPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAV 485
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + ++ V P V +L Q A G+
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGH 543
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VYT +LG + + + + P + G L V +I+ G ++ L
Sbjct: 544 CLTVALTTSGHVYTMGSAVYGQLG-NPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLT 602
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D+ P L+E + ++ VV AA H V
Sbjct: 603 ---SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWV 659
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 660 SGSDQSMCS 668
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 299
P+ +E + V + G A+++++G +Y SWG ++ RLGH + + +P L+
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
+L ++ + +A G + A+ + + G G LGHG+ P+ ++ L
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ ++ G WH A+V G++ T+G G +G LGHG+ SVP+ V++L ++ + A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ + P V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSR-FVPTCV 528
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L + N Q++ + + T ALT SG +Y G+ GQLG N Q + P
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577
Query: 528 RVDIDL 533
RV+ L
Sbjct: 578 RVEGKL 583
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
++ D P+ +E L++Q + + G HAA+V + G + +WG G LGHG + +
Sbjct: 295 AKMDYLVPKPLEFAVRLDVQNI--SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA 352
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 460
PK++ +L + VA G+Y T V+ GD+Y++G G + LGH GN ++
Sbjct: 353 QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGH-------GNDVSH 405
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ L+ ++ +S + W HT +T +G+L+ FG G G LG
Sbjct: 406 WVPKRVDGPLEGIH-----VSSISCGPW--HTALVTSAGQLFTFGDGSFGVLG 451
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 158/321 (49%), Gaps = 20/321 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-GRTM 210
AG + AV S G V + G S G+LG+G + P I +R I + G+ G ++
Sbjct: 168 AGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSI 227
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
I GQ++ +G +G+ +G T+ SP+L+E+L + +V A G+ +A + G
Sbjct: 228 AIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDADCGHRHSAAVCDAG 285
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y + G+ RLG P + E Q+ G+ + + L+ G V+S
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTD--GRTVWS 340
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G GKLGHG + P++I+ Q L + +AAG +A V ++G + WG+G
Sbjct: 341 FGAAENGKLGHGDTNRQFRPKIIDALQGLTITQ--IAAGTQISAAVTREGALYVWGFGP- 397
Query: 391 GCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
CLG+G ++E +PKVV+ L+ I +A G+ +++DG V+++G ++
Sbjct: 398 -CLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQC---- 452
Query: 450 IADGQGNRHANVLTPQLVTSL 470
G G+ A +PQ+V L
Sbjct: 453 ---GTGSGMATYTSPQMVQGL 470
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 21/279 (7%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHSIA+ G ++++G G+LGHG + + P+ I +L I+ A G + + D
Sbjct: 224 GHSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCD 283
Query: 215 AGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR- 271
AG +Y +G+ +G G +Q + V P + E+ Q G T VLS +GR
Sbjct: 284 AGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRT 337
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V++F + +LGH P ++ L+ + + QIAAG + A + + V+
Sbjct: 338 VWSFGAAENGKLGHGDTNRQFRP-KIIDALQGLTITQIAAG-TQISAAVTREGALYVW-- 393
Query: 332 GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G LG+GS +DE P+++ L + +A G H + +DG V TWG +
Sbjct: 394 --GFGPCLGNGS-SDETFMLPKVVR--GLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQ 448
Query: 390 YGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFV 427
G G G+ + P++VQ L+ V G TFV
Sbjct: 449 NGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 35/353 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
V+ +GSNSS QL T E++ PR + S+ G +++ AG T + G V A GK
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNL-SVYG-KVMSMTAGQYCTFAVLSNGTVMANGKG 188
Query: 225 SFGEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
S+G G + +SP L+E ++ I + + G+ + + + G+++T+ G+
Sbjct: 189 SYGRLGNGA--SASSSSPILIEFPAPVRKILTSKGSDGH--SIAIGKNGQIWTWGDGDYG 244
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH P L+ L + +V G+ + A+ C + Y G G G+LG
Sbjct: 245 KLGHGDSTTQKSP-KLIEALASRVIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGL 300
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 400
G P + + + V G H V+ DGR V ++G G LGHG+
Sbjct: 301 GDALQRSVPVQVPDIR----EASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNR 356
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ PK++ AL + +A G + V+ +G +Y +G G G G+
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCL---------GNGSSDET 407
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P++V L V+ I++ + H ALT+ G ++ +G GQ G
Sbjct: 408 FMLPKVVRGLS--GRVVIDIAVGEN-----HVVALTKDGLVFTWGNNQNGQCG 453
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 24/248 (9%)
Query: 275 FSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
F WG N ++ P D +P ++ + A YC L S V + G
Sbjct: 132 FCWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVL----SNGTVMANGK 187
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G+LG+G+ P LIE F + + H+ +G++G++ TWG G YG L
Sbjct: 188 GSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKL 246
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GHG+ + PK+++AL + G + V + G +Y +G G+ LG + D
Sbjct: 247 GHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG---LGDA 303
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQL 512
P V +++ ++ V + HT L+ G+ +++FGA + G+L
Sbjct: 304 LQRS-----VPVQVPDIREASQVVCGFN---------HTVVLSTDGRTVWSFGAAENGKL 349
Query: 513 GIELVNNQ 520
G N Q
Sbjct: 350 GHGDTNRQ 357
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA R A G HS AV G +Y +G G+LG G + R P++
Sbjct: 261 EALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQ--RSVPVQVPDIREA 318
Query: 200 IQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q G T+++S G+ V++FG G+ +G T P+++++L+ + + Q A
Sbjct: 319 SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG--DTNRQFRPKIIDALQGLTITQIAA 376
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G +A ++REG +Y WG LG+ + ++ L V+ IA G +++A
Sbjct: 377 GTQISAAVTREGALYV--WGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVA 434
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
L G+ V++ G G+ G GS P++++ +Q V AG H V
Sbjct: 435 LT--KDGL-VFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVT--AGTTHTFV 487
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 40/370 (10%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
TS ++ +G L HG + PR + + I + A G +++ G+V
Sbjct: 167 TSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV 226
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
+++G D+ G + V + V+ P+++ESL + V A G T +S G +Y WG
Sbjct: 227 FSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY--EWG 282
Query: 279 NDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
G + + PH L G L+ I +++IA G+ + ++ S +++ G G
Sbjct: 283 EGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS---SAGQLFAYGDG 339
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ----------DGRVCT 384
G LGHG P+ +E L ++ +A G WH A + + G++ T
Sbjct: 340 TFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 397
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LGH +++ + VP V+ LND V+ T V++ G V++ G E
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+ D T + E V +IS +S H LT +GK++ +
Sbjct: 458 LGNPLSED----------TSICLIEGPLKTEFVREISSGSS-----HIAVLTMNGKVFTW 502
Query: 505 GAGDKGQLGI 514
G G +GQLG+
Sbjct: 503 GKGTEGQLGL 512
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 147/300 (49%), Gaps = 34/300 (11%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAA 204
+AIA G H+ AV+ G +Y +G + G G +W P + L GI I++ A
Sbjct: 260 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 319
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T +IS AGQ++A+G +FG +G T V P+ VESLK + A G + TA
Sbjct: 320 GHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRAKAIACGPWHTA 377
Query: 265 -VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLLGTLENIPVVQI 309
++ R G V + F+WG+ R LGH + P VEP L + Q+
Sbjct: 378 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP------LNDFDFAQV 431
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 368
+ + L +G+ V+++G G+LG+ +++ LIE L + V +++
Sbjct: 432 SCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--PLKTEFVREISS 485
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G+ H AV+ +G+V TWG G G LG G+ S P +V+AL D + +A G T +
Sbjct: 486 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q +I +T GVV++ GS G+LG+ +E+ L+ + + ++G+
Sbjct: 429 AQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSS 488
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ G+V+ +GK + E + G+ + P LVE+L++ V A G FT +
Sbjct: 489 HIAVLTMNGKVFTWGKGT--EGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545
>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
Length = 1003
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 41/357 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR ++S Q + + A G +++ GQV+++G+++ G G + + V+ P++++S
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGR--LGHKTSDSVSDPKIIDS 280
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 303
L + V A G +T +S G +Y WG LG + + + PH L+ T +
Sbjct: 281 LASTPVKTIAFGAKYTCAVSVSGELY--EWGEGIHSLGFGKNQCQRSPWFPHKLISTSDG 338
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V++IA G + ++ S +Y+ G G G LGHG HP+ +E L +
Sbjct: 339 ISVLKIACGQWHTAIIS---SLGKLYTYGYGTFGVLGHGDTHSVVHPKEVES--LRGSRA 393
Query: 364 VVVAAGAWHAAVVGQD----------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
VA G WH A + + G++ TWG G LGH N++ + VP V++L D
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC 453
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
V+ G T V++ G V++ G E LG++ R N + LK
Sbjct: 454 DFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNS--------RSDNTSICMVEGPLK-- 503
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
E V IS +S H LT +GK++ +G G +GQLG+ + +R +P V+
Sbjct: 504 TEFVKDISCGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GDYVDRSSPTLVE 552
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 168/354 (47%), Gaps = 48/354 (13%)
Query: 189 RPIRSLQGI---RIIQA---AAGAGRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTS 241
R IRS + I RIIQ G ++ +G D G +++G ++
Sbjct: 164 RDIRSAETIKDQRIIQMPKLKQSEGSNAATDSLKDIFVWG-DVLGRMSDHGHVPATNISL 222
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLG 299
P+L++S + + V A G A+++++G+V FSWG N RLGH T + +P ++
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQV--FSWGEENGGRLGHKTSDSVSDP-KIID 279
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQ 355
+L + PV IA G Y A++ SG +Y G G+ LG G ++ P +LI
Sbjct: 280 SLASTPVKTIAFGAKYTCAVSV--SG-ELYEWGEGIHS-LGFGKNQCQRSPWFPHKLIST 335
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+++ + +A G WH A++ G++ T+G+G +G LGHG+ PK V++L +A
Sbjct: 336 SDGISV--LKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRA 393
Query: 416 IHVATGDYTTFVVSED----------GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
VA G + T + E G ++++G LGH N+ + L P
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHT-------NKKSK-LVPT 445
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
V SL ++ Q+S S+ T LT +G ++ G+ + GQLG +N
Sbjct: 446 RVESL--IDCDFTQVSCGMSL-----TAVLTITGVVFTIGSKEHGQLGNSRSDN 492
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 157/342 (45%), Gaps = 28/342 (8%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
N Q+IA G H+ VT +G V+S+G + G+LGH T++ P+ I SL + A G
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFG 292
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP----QLVESLKNIFVVQAAIGNF 261
A T +S +G++Y +G+ G G + SP +L+ + I V++ A G +
Sbjct: 293 AKYTCAVSVSGELYEWGE---GIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQW 349
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA--- 318
TA++S G++YT+ +G LGH + V P + +L +A G + A
Sbjct: 350 HTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKE-VESLRGSRAKSVACGPWHTAAIVE 408
Query: 319 ----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L G +++ G GGKLGH ++ + P +E L++ V+ G A
Sbjct: 409 TSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVE--SLIDCDFTQVSCGMSLTA 466
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
V+ G V T G +G LG+ + S+ V L ++ G V++ +G V
Sbjct: 467 VLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKV 526
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVN 474
+++G G LG D +P LV +L KQV+
Sbjct: 527 FTWGKGTEGQLGLGDYVDRS--------SPTLVEALEDKQVD 560
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 15/289 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+ VT G + + G N +GQLG G E ++ + I + AAG T+
Sbjct: 112 GGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADV--AAGFWHTLAA 169
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S G++YA+G + G+ + KL PQ + L++ + Q A G++ + L+++G V
Sbjct: 170 SKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEV 229
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
YT+ +G RLGH + ++ P + + ENI I AG+ Y + A SG V+
Sbjct: 230 YTWGFGAHGRLGHGSTEDEFMPKRVEALVGENIS--SIHAGFEY--SSAVSTSG-KVFVW 284
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G LG G + D+ P +++ F Q +A G++HAA V G + TWG +G
Sbjct: 285 GYGHFYVLGQGDKKDQLAPVVLD-FPTSIRQ---LAFGSFHAAAVSHSGMLFTWGHATHG 340
Query: 392 CLGHGNEECESV--PKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 437
LGHG + + P V+ A ++ + VA G T VV+ GDV+SF
Sbjct: 341 PLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 175/402 (43%), Gaps = 50/402 (12%)
Query: 125 CGGSWKLVLRF------LLAGEACCR-RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 177
C W + F +L+ CR S I G + + ++S+GS G+
Sbjct: 16 CTSRWTMSSAFRHKENSMLSAPLICRLHAGSNLIHGREQKVTLAGARTLWSWGSADHGRG 75
Query: 178 GHG-----------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
G G E E +P+ L I + A G +M+++++G++ G +
Sbjct: 76 GSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKKVACGGAHSMIVTESGRLLTCGLNDN 133
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ G L + + E + A G + T S++G++Y + +LGHH
Sbjct: 134 GQLGLG----NLENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHH 189
Query: 287 TEPND--VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
VEP +L L + P+ Q+A G + +AL VY+ G G G+LGHGS
Sbjct: 190 DTAVKLAVEPQEIL-LLRDAPIKQVACGSYHSMALTKDGE---VYTWGFGAHGRLGHGST 245
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
DE P+ +E N+ + AG +++ V G+V WG+G + LG G+++ + P
Sbjct: 246 EDEFMPKRVEALVGENISS--IHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAP 303
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLT 463
V+ ++ + A G + VS G ++++G LGH G + N +L
Sbjct: 304 VVLDFPTSIRQL--AFGSFHAAAVSHSGMLFTWGHATHGPLGH-------GLKSPNIILE 354
Query: 464 PQLVTSLKQV-NERVVQISLTNSIYWNAHTFALTESGKLYAF 504
P ++ + Q+ N + V + HT +T +G +++F
Sbjct: 355 PTVLDAPAQLQNSKQVACG-------SQHTLVVTGTGDVFSF 389
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 11/226 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS+A+T G VY++G + G+LGHG+TE+E+ P+ + +L G I AG
Sbjct: 212 QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEY 271
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ +S +G+V+ +G F G + +L +P +++ +I Q A G+F A +S
Sbjct: 272 SSAVSTSGKVFVWGYGHFYVLGQGDKKDQL--APVVLDFPTSI--RQLAFGSFHAAAVSH 327
Query: 269 EGRVYTFSWGNDARLGHHTE-PNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G ++T+ LGH + PN + EP L + Q+A G + L +
Sbjct: 328 SGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGD-- 385
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
V+S G G G+LG GS D P+ I +F +L+ VA G +H
Sbjct: 386 -VFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQ--VACGLFH 428
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 423
VAAG WH + G++ WG ++G LGH + + P+ + L D VA G Y
Sbjct: 159 VAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSY 218
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ +++DG+VY++G G LGH + D + L + ++S+ E +S +
Sbjct: 219 HSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTS 278
Query: 484 NSIY-WNAHTFALTESGKLYAFGAGDK 509
++ W G Y G GDK
Sbjct: 279 GKVFVWG--------YGHFYVLGQGDK 297
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 145/281 (51%), Gaps = 25/281 (8%)
Query: 157 SIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTMLIS 213
S AVT G +Y +G N+ G LG G+ +W PR + L+GI + + G T +++
Sbjct: 335 SCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVT 394
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 266
AGQ++ FG +FG +G + + V++P+ VESLK + ++ A G + TA +
Sbjct: 395 SAGQLFTFGDGTFGVLGHGDRSS--VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGS 452
Query: 267 -----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
G+++T+ G+ RLGH + + P + TL Q+A G+ +AL
Sbjct: 453 SSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVP-TYVATLVEPSFCQVACGHSLTVALTT 511
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
SG VY++G + G+LG+ + D K P +E + N + A GA+H AV+
Sbjct: 512 --SGQ-VYTMGSPVYGQLGN-PQADGKVPTRVEGKLMKNFVEEL-ACGAYHVAVLTSRTE 566
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVAT 420
V TWG G G LGHG+ + + P +V+AL D VK I T
Sbjct: 567 VYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGT 607
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 150/346 (43%), Gaps = 48/346 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G L++ G+V+++G++ G +GV V+ P+ V+
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDG 319
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
LKN V A G + + ++ G +Y WG +A LG +E P L G LE
Sbjct: 320 LKNFNVELVACGEYLSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWVPRKLSGPLEG 377
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V ++ G + + S +++ G G G LGHG R+ PR +E L L+
Sbjct: 378 IHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRSSVSTPREVE--SLKGLRT 432
Query: 364 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
+ VA G WH A V + G++ TWG G G LGHG++E VP V L
Sbjct: 433 MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLV 492
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G T ++ G VY+ G LG N ADG
Sbjct: 493 EPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLG-NPQADG------------------ 533
Query: 472 QVNERVVQISLTNSIYWNA----HTFALTESGKLYAFGAGDKGQLG 513
+V RV + N + A H LT ++Y +G G G+LG
Sbjct: 534 KVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 579
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 38/306 (12%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 299
P+ +ES + V A G A+++++G V FSWG + RLGH + +DV +
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEV--FSWGEELGGRLGHGVD-SDVSHPKFVD 318
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
L+N V +A G YL + ++ G LG GS + PR + L
Sbjct: 319 GLKNFNVELVACGE-YLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSG-PLE 376
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
+ V+ G WH AVV G++ T+G G +G LGHG+ S P+ V++L ++ + VA
Sbjct: 377 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVA 436
Query: 420 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
G + T V E G ++++G G+ LGH G++ A L P V
Sbjct: 437 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTYV 488
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+L V Q++ +S+ T ALT SG++Y G+ GQLG N Q + P
Sbjct: 489 ATL--VEPSFCQVACGHSL-----TVALTTSGQVYTMGSPVYGQLG----NPQADGKVPT 537
Query: 528 RVDIDL 533
RV+ L
Sbjct: 538 RVEGKL 543
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++ A G
Sbjct: 381 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVW 440
Query: 208 RTMLISDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + G+++ +G G +G + +LV P V +L Q
Sbjct: 441 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLV--PTYVATLVEPSFCQ 498
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ T L+ G+VYT +LG+ V P + G L V ++A G +
Sbjct: 499 VACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV-PTRVEGKLMKNFVEELACGAYH 557
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P ++E + ++ ++ AA
Sbjct: 558 VAVLT---SRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAIC 614
Query: 371 WHAAVVGQDGRVCT 384
H V G D +C+
Sbjct: 615 LHKWVSGIDQSMCS 628
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 173/376 (46%), Gaps = 47/376 (12%)
Query: 160 VTSKGVVYSFGS-----NSSGQLGH--GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ S G VY +G NSS LG + P+P+ S + + Q G L+
Sbjct: 259 IESLGDVYIWGEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALV 318
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G+V+ +G+DS G +G + K P LVESL V A G + + +S G +
Sbjct: 319 TRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVESLAITNVTFVACGEYHSCAVSSSGDL 376
Query: 273 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+T WG+ LGH T+ + P + G LE + VV +A G + ALA S +
Sbjct: 377 FT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACG-TWHSALAT--SNGKL 431
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG--- 380
+++G G G LGHG R +P+ + QLL+ + + VA G WH+A V+G G
Sbjct: 432 FTIGDGRFGVLGHGDRDSVAYPK---EVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNT 488
Query: 381 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
R+ TWG G LGH N+E P V A+ + VA G T ++ G V++
Sbjct: 489 SAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTM 548
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G LG N +DG+ P LV K V E V +IS + H LT
Sbjct: 549 GGTAYGQLG-NPNSDGK--------VPILVRG-KLVGEFVEEISCGAN-----HVAVLTS 593
Query: 498 SGKLYAFGAGDKGQLG 513
+LY +G G G+LG
Sbjct: 594 RSELYTWGRGANGRLG 609
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AV+S G ++++G ++ +G LGHGT W P+ + L+G++++ A G +
Sbjct: 363 GEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHS 422
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L + G+++ G FG +G + + V P+ V+ L ++ A G + +A +
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACGVWHSAAIIEV 480
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ R++T+ G+ RLGH + +EP + E Q+A GY +AL
Sbjct: 481 MGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAE-YNFHQVACGYTMTVAL 539
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+++G G+LG+ + +D K P L+ + +L+ ++ GA H AV+
Sbjct: 540 TT--SGH-VFTMGGTAYGQLGNPN-SDGKVPILV-RGKLVGEFVEEISCGANHVAVLTSR 594
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+ TWG G G LGHG+ + + P +V+AL D +++ G T +
Sbjct: 595 SELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGSTFTSCI 643
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
AC ++ I G S + TS ++++G +LGH E P + ++
Sbjct: 468 ACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFH 527
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 259
Q A G T+ ++ +G V+ G ++G+ K+ P LV L FV + + G
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKV---PILVRGKLVGEFVEEISCG 584
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
AVL+ +YT+ G + RLG H + +D + ++ L++ + I+ G +
Sbjct: 585 ANHVAVLTSRSELYTWGRGANGRLG-HGDTDDQKSPTMVEALKDRHIKNISCGSTF 639
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAG 207
Q G ++A+T+ G V++ G + GQLG+ ++ + P +R L G + + + GA
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKV-PILVRGKLVGEFVEEISCGAN 586
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ ++Y +G+ + G +G T SP +VE+LK+ + + G+ FT+ +
Sbjct: 587 HVAVLTSRSELYTWGRGANGRLGHG--DTDDQKSPTMVEALKDRHIKNISCGSTFTSCI 643
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 174/345 (50%), Gaps = 18/345 (5%)
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G +T RP+ + SL G+ I G+ + + +G++ ++G+ G+ G
Sbjct: 90 GRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQ--LGHASFS 147
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
++P +++ L + V + A G F+A L G++YT+ +LG + P +
Sbjct: 148 HSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPR-M 206
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH---PRLIE 354
L ++ + V +A G +++ L + VY+ G G+LGHG R +KH P+ +
Sbjct: 207 LPSMNHRHVHLMACGAAHIVVLT---TSRDVYTWGNNSYGQLGHGFR--KKHCLQPKSVR 261
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DV 413
L+++ +V AG H+ V+ G + TWG G +G LGHG+ E + +P ++ L+
Sbjct: 262 VMSGLDIKQIV--AGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKT 319
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGNRH-ANVLTPQLVTSLK 471
+A + +G ++ G VYS+G LGH + + NR ++V++P+++ S
Sbjct: 320 QASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKII-SFF 378
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQLGIE 515
+E ISL++ + H A+TE L+A+G G+ GQLG++
Sbjct: 379 AASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLD 423
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 166/387 (42%), Gaps = 46/387 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +A+ + G + S+G SGQLGH + P I L R+ + A G + +
Sbjct: 117 GSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAAL 176
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ GQ+Y +G + +G+ G + + + P+++ S+ + V A G VL+ V
Sbjct: 177 MEGGQLYTWGCNRYGQLGQGDRTSSAI--PRMLPSMNHRHVHLMACGAAHIVVLTTSRDV 234
Query: 273 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
YT WGN++ +LGH + + + + QI AG + + S +Y+
Sbjct: 235 YT--WGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT---SFGDIYT 289
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G+LGHG + P L+ Q ++ +GA + G V +WG +
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPLD-PKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348
Query: 391 GCLGHGNEECES----------VPKVVQ---ALNDVKAIHVAT---GDYTTFVVSEDGD- 433
G LGHG + S PK++ A + AI +++ G + ++E D
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDT 408
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
++++G GE LG D + + PQ V +K + I L + N
Sbjct: 409 LFAWGRGEHGQLG----LDPRDTSFRPI--PQEVKKMKGM------IVLAAACSENHSVV 456
Query: 494 ALTESG-------KLYAFGAGDKGQLG 513
T G K++++G G GQLG
Sbjct: 457 VATMPGSGPKGDMKVFSWGRGSFGQLG 483
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 37/293 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G H + +T+ VY++G+NS GQLGHG ++ +P+ +R + G+ I Q AG + +
Sbjct: 221 GAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCV 280
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSR 268
++ G +Y +G+ FG+ +G +K + P L+ L QA++ G F ++
Sbjct: 281 MTSFGDIYTWGRGDFGQLGHGDMESKDI--PTLLSPLDP--KTQASLIVSGADFIMAMTY 336
Query: 269 EGRVYTFSWGND--ARLGHHTE---------PNDVEPHPLLGTL------ENIPVVQIAA 311
G VY SWG + +LGH + P+DV ++ + I + I+
Sbjct: 337 SGAVY--SWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISC 394
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G ++LA+ + +++ G G G+LG R P E ++ + + A
Sbjct: 395 GSHHVLAITEKKD--TLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSEN 452
Query: 372 HAAVVGQ--------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
H+ VV D +V +WG G +G LG+G+ + + + VQ K +
Sbjct: 453 HSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGSGKVPVMKETVQDNQGAKGL 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 37/326 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S A+ G +Y++G N GQLG G PR + S+ + A GA +++
Sbjct: 169 GVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVL 228
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ + VY +G +S+G+ +G + K P+ V + + + Q G + V++ G +
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFR-KKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDI 287
Query: 273 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQ---IAAGYCYLLALACQPSGMAV 328
YT+ G+ +LGH E D+ LL L+ P Q I +G +++A+ SG AV
Sbjct: 288 YTWGRGDFGQLGHGDMESKDIP--TLLSPLD--PKTQASLIVSGADFIMAMTY--SG-AV 340
Query: 329 YSVGCGLGGKLGHGSR----------TDEKHPRLIEQFQLLNLQPVV----VAAGAWHA- 373
YS G G+LGHG +D P++I F + ++ G+ H
Sbjct: 341 YSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVL 400
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSE- 430
A+ + + WG G +G LG + +P+ V+ + + + A + + VV+
Sbjct: 401 AITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATM 460
Query: 431 -------DGDVYSFGCGESASLGHNA 449
D V+S+G G LG+ +
Sbjct: 461 PGSGPKGDMKVFSWGRGSFGQLGYGS 486
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
HG + R E L L ++ G+ H + G++ +WG G G LGH +
Sbjct: 89 HGRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSH 148
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
S P ++ L + VA G + + E G +Y++GC L GQG+R ++
Sbjct: 149 SSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQL-------GQGDRTSS 201
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P+++ S+ N R V + + AH LT S +Y +G GQLG
Sbjct: 202 AI-PRMLPSM---NHRHVHLMACGA----AHIVVLTTSRDVYTWGNNSYGQLG 246
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT----TEEEWRPRPIRSLQGIRI 199
+ + S ++G +A+T G VYS+G N GQLGHG ++ P + S + I
Sbjct: 318 KTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISF 377
Query: 200 IQAAA------------GAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
A+ G+ + I++ ++A+G+ G+ + T PQ V+
Sbjct: 378 FAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVK 437
Query: 247 SLKNIFVVQAAIGNFFTAVLSR------EGRVYTFSWGN 279
+K + V+ AA + V++ +G + FSWG
Sbjct: 438 KMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGR 476
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 168/351 (47%), Gaps = 29/351 (8%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ +GSNSS Q G TE PR +RSL ++ Q AG T +I G V A GK+S
Sbjct: 344 VFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQ--QVEAGQYCTFIIDTKGCVSACGKNS 401
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLG 284
+G G + V P+ + I V ++ G + + LS G VY++ G+ +LG
Sbjct: 402 YGRLGLGNSSNQPV--PKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLG 459
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
H EP + G + ++AGY + A+ S +Y+ G G G+LGHG
Sbjct: 460 HGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVT---SDGQLYTWGEGDHGRLGHGDC 516
Query: 345 TDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECES 402
P L++ L+ PV VA G+ H +DG V ++G G G LGHGN
Sbjct: 517 NPRFIPTLVKS---LSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLY 573
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P+ ++ L K VA G + + ++ G+V+++G G + G G+ +
Sbjct: 574 KPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNL---------GCGSSEITLF 624
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+P +V L Q + ++ IS+ +S H ALT + +YA+G+ KGQ G
Sbjct: 625 SPAVVEDLMQ--QMIIDISVGDS-----HCLALTRNCAVYAWGSNGKGQCG 668
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 33/350 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-G 207
Q AG + + +KG V + G NS G+LG G + + P+ I I+ + ++ G G
Sbjct: 377 QVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDG 436
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL---KNIFVVQAAIGNFFTA 264
++ +SD G+VY++G +G+ +G T P+L++ K I +V A G +A
Sbjct: 437 HSLALSDTGEVYSWGDGDYGKLGHGDVATH--KEPKLIQGPFIGKVIELVSA--GYRHSA 492
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPVVQIAAGYCYLLALAC 321
++ +G++YT+ G+ RLGH D P L+ +L ++PV +A G + LAC
Sbjct: 493 AVTSDGQLYTWGEGDHGRLGH----GDCNPRFIPTLVKSLSDMPVGYVACGSTH--TLAC 546
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
G V+S G G GKLGHG+ P+ IE + ++ VAAG + + G
Sbjct: 547 SRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKK--VAAGIHFSVALTCTGE 604
Query: 382 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V TWG G LG G+ E P VV+ L I ++ GD ++ + VY++G
Sbjct: 605 VFTWGQG--SNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSN 662
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYW 488
GQG+ + V P V +L KQ+N+ + ++S+ W
Sbjct: 663 GKGQC-------GQGHSTSPVSRPSKVINLEGKQINQ--ISAGTSHSVAW 703
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 154/364 (42%), Gaps = 50/364 (13%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 206
+ + G + +TS+G V S G + G+LGHG ++ I +LQG I Q +
Sbjct: 3430 RIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGS 3489
Query: 207 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++ +++ G+V+++G FG+ +G + P+L+ESL ++ V+Q A G+ +AV
Sbjct: 3490 DGHSLALTETGEVFSWGDGDFGKLGHG--NNERQRKPKLIESLYDVVVIQVACGHKHSAV 3547
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
LS++G VY F +LG N P + + G+ + +AC +
Sbjct: 3548 LSQDGEVYVFGSAEHGKLGLGGHINKKRPTKI-----------VHKGFLNIKYIACGQNH 3596
Query: 326 M------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
V++ G G GGKLG GS+ D P+ I N++ G + +D
Sbjct: 3597 TICIGENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNG--FTMFLSED 3654
Query: 380 GRVCTWGWGRYGCLGHGNEECESV-------PKVVQALNDVKAIHVATGDYTTFVVSEDG 432
G + Y C ++ V P+ + VATG V++ G
Sbjct: 3655 GEL-------YSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARG 3707
Query: 433 DVYSFG--CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
V+++G C GH+ V P ++ L N + + S T+ W A
Sbjct: 3708 HVWAWGNNCEGILGFGHD----------LPVQKPMIIQILSDKNIKQIATSRTHCAAWTA 3757
Query: 491 HTFA 494
F+
Sbjct: 3758 EPFS 3761
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 15/277 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S +I GHS+A+T G V+S+G G+LGHG E + +P+ I SL + +IQ A G
Sbjct: 3484 STSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHK 3543
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++S G+VY FG G+ G K + + + NI + A G T +
Sbjct: 3544 HSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYI--ACGQNHTICIG 3601
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 325
E V+ F G +LG ++ + P ++ TL +NI G+ L+
Sbjct: 3602 -ENVVWAFGEGEGGKLGIGSKKDIYVPQEII-TLNGKNIKKAYCGNGFTMFLS-----ED 3654
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
+YS G T++ P I +FQ Q V VA G H V+ G V
Sbjct: 3655 GELYSCGSDNLQDATDVLYTEKLIPEKIFEFQ---GQIVTDVATGPDHVLVLTARGHVWA 3711
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG G LG G++ P ++Q L+D +AT
Sbjct: 3712 WGNNCEGILGFGHDLPVQKPMIIQILSDKNIKQIATS 3748
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 385
V S G G G+LGHG + +I Q + V + G+ H+ + + G V +W
Sbjct: 3446 TVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW 3505
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G +G LGHGN E + PK++++L DV I VA G + V+S+DG+VY FG E L
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKL 3565
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G H N P + +N + + HT + E+ ++AFG
Sbjct: 3566 GLGG--------HINKKRPTKIVHKGFLNIKYIACG-------QNHTICIGEN-VVWAFG 3609
Query: 506 AGDKGQLGI 514
G+ G+LGI
Sbjct: 3610 EGEGGKLGI 3618
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 142 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRII 200
C ++ S + GHS+A++ G VYS+G G+LGHG P+ I+ G I
Sbjct: 423 CKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIE 482
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+AG + ++ GQ+Y +G+ G +G + + P LV+SL ++ V A G+
Sbjct: 483 LVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFI--PTLVKSLSDMPVGYVACGS 540
Query: 261 FFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
T SR+G V++F G++ +LGH +P + G L + + ++AAG + +AL
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEG-LRHYKIKKVAAGIHFSVAL 599
Query: 320 ACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
C G G LG G S P ++E L+ + ++ G H + +
Sbjct: 600 TCTGEVFT-----WGQGSNLGCGSSEITLFSPAVVE--DLMQQMIIDISVGDSHCLALTR 652
Query: 379 DGRVCTWGWGRYGCLGHG 396
+ V WG G G G
Sbjct: 653 NCAVYAWGSNGKGQCGQG 670
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 153 GPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++A + G V+SFGS +G+LGHG T ++P+ I L+ +I + AAG ++
Sbjct: 539 GSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVA 598
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G+V+ +G+ S G +++ + SP +VE L ++ ++G+ L+R
Sbjct: 599 LTCTGEVFTWGQGS----NLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNC 654
Query: 271 RVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
VY +WG++ + GH T P P ++ LE + QI+AG + +A P
Sbjct: 655 AVY--AWGSNGKGQCGQGHSTSPVS-RPSKVIN-LEGKQINQISAGTSHSVAWTTLP 707
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 385 WGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG GR G LG +C ++ ++ N A + G TFV++ G V S G G
Sbjct: 3397 WGNGRNGQLGDTAVGQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGNYG 3456
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LGH G + N+ ++++L + V ++ SI + H+ ALTE+G++++
Sbjct: 3457 RLGH-----GHSDSLPNL---TMISAL----QGFVITQVSTSIGSDGHSLALTETGEVFS 3504
Query: 504 FGAGDKGQLGIELVNNQTERGNPER 528
+G GD G+LG GN ER
Sbjct: 3505 WGDGDFGKLG---------HGNNER 3520
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 42/341 (12%)
Query: 80 FFRQPANFAPDYQLSISELAALDMCQKRAIFKP-MTEAERQDLKQKCGGSWKLVLRFLLA 138
+ R+P A + +SE L + ++ + P + EA +L ++
Sbjct: 243 YVRRPPIEAVVFGWGVSEDGQLGVEERENVVAPKVVEA---------------LLGVQIS 287
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 198
G + CR + +AG +++A+ + G V+SFG N G LGHG + E +P+ I +L+GIR
Sbjct: 288 GRSFCR---TPLVAGSRNTMALDAAGQVWSFGWNDRGTLGHGHRDVETKPKRIPALKGIR 344
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQA 256
I+Q A G + +SD G ++A+G + +G+ + G + +T P V+ + V Q
Sbjct: 345 IVQVAIGGWHCLALSDRGTMFAWGGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQV 404
Query: 257 AIGNFFTAVLSREGRVYTF--SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ G + L +G V+ + +WG D + P V HP G V ++ G
Sbjct: 405 SAGGMHSLALLEDGMVWQWGENWG-DFSMRPVRTPRPVAVHPDEGG-----VAAVSCGAF 458
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV---AAGAW 371
+ LAL Q V S G G+LG+GS T PR + L+++ VVV AAG W
Sbjct: 459 HNLALTAQGR---VLSWGMNDYGQLGNGSTTYATTPRPV-----LDMEGVVVADIAAGGW 510
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQAL 410
H+ + G V WG G YG LG G+ S P+ V+ L
Sbjct: 511 HSCALSSAGEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGL 551
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 40/326 (12%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI-------IQAAAGAGRTMLISDA 215
+ VV+ +G + GQLG E P+ + +L G++I AG+ TM + A
Sbjct: 250 EAVVFGWGVSEDGQLGVEERENVVAPKVVEALLGVQISGRSFCRTPLVAGSRNTMALDAA 309
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
GQV++FG + G +G + + T P+ + +LK I +VQ AIG + LS G + F
Sbjct: 310 GQVWSFGWNDRGTLGHGHRDVE--TKPKRIPALKGIRIVQVAIGGWHCLALSDRGTM--F 365
Query: 276 SWGND--ARLGH--HTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+WG + + G + + EP P+ LG + V Q++AG + LAL GM
Sbjct: 366 AWGGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALL--EDGMV--- 420
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAGAWHAAVVGQDGRVCTW 385
G G S + PR + + P V+ GA+H + GRV +W
Sbjct: 421 --WQWGENWGDFSMRPVRTPRPVA------VHPDEGGVAAVSCGAFHNLALTAQGRVLSW 472
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LG+G+ + P+ V + V +A G + + +S G+V+ +G GE L
Sbjct: 473 GMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSAGEVWVWGRGEYGRL 532
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLK 471
G + D G ++ L PQ V L+
Sbjct: 533 G---LGDRSG---SSKLRPQKVRGLE 552
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+T++G V S+G N GQLG+G+T PRP+ ++G+ + AAG + +S A
Sbjct: 459 HNLALTAQGRVLSWGMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSA 518
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G+V+ +G+ +G G + PQ V L++ VVQ
Sbjct: 519 GEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGLESHVVVQ 558
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 43/313 (13%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-------GNFFTAVLSRE 269
+ FG + + GV+ + V +P++VE+L + + + G+ T L
Sbjct: 250 EAVVFGWGVSEDGQLGVEERENVVAPKVVEALLGVQISGRSFCRTPLVAGSRNTMALDAA 309
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G+V++F W + LGH DVE P + L+ I +VQ+A G + LAL+ + + A
Sbjct: 310 GQVWSFGWNDRGTLGHGHR--DVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGTMFAW 367
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCT 384
G G + G R D P ++ L L P V+AG H+ + +DG V
Sbjct: 368 GGNEYGQCGSVLPGQR-DITEPMPVD----LGLGPSQRVRQVSAGGMHSLALLEDGMVWQ 422
Query: 385 WG--WGRYGCLGHGNEECESVPKVVQALNDVKAIH-VATGDYTTFVVSEDGDVYSFGCGE 441
WG WG + + P+ V D + V+ G + ++ G V S+G +
Sbjct: 423 WGENWGDF------SMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGRVLSWGMND 476
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LG+ + TP+ V + E VV + + H+ AL+ +G++
Sbjct: 477 YGQLGNGSTT--------YATTPRPVLDM----EGVVVADIAAGGW---HSCALSSAGEV 521
Query: 502 YAFGAGDKGQLGI 514
+ +G G+ G+LG+
Sbjct: 522 WVWGRGEYGRLGL 534
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 147/291 (50%), Gaps = 24/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G+ + G LGHG W P+ + L+GI + + G T
Sbjct: 392 GEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHT 451
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG +G + K V+ P+ VESLK + ++A+ G + TA +
Sbjct: 452 AVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEV 509
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + N Q+A G+ +
Sbjct: 510 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNF--CQVACGHSLTV 567
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL SG VY++G + G+LG+ + D K P +E +LL +A GA+H AV+
Sbjct: 568 ALTT--SGH-VYAMGSPVYGQLGN-PQADGKLPTRVEG-KLLKSFVEEIACGAYHVAVLT 622
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P +V AL D +A G T +
Sbjct: 623 LRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 163/370 (44%), Gaps = 46/370 (12%)
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G G + P+ + S + + A G L++ G+++++G++S G +GV
Sbjct: 313 GLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD- 371
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 293
V P+L+++L N + A G + T ++ G +YT WGN A LGH + +
Sbjct: 372 -VLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYT--WGNGAYNYGLLGHGNQVSHWV 428
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
P + G LE I V I+ G + A S +++ G G G LGHG R PR +
Sbjct: 429 PKRVNGPLEGIHVSYISCGPWH---TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREV 485
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 401
E + L+ + + G WH A V + G++ TWG G G LGHG++E +
Sbjct: 486 ESLK--GLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP V AL + VA G T ++ G VY+ G LG N ADG+
Sbjct: 544 LVPTCV-ALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLG-NPQADGK------- 594
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
P V E + S I A H LT ++Y +G G G+LG +
Sbjct: 595 -LPTRV-------EGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGH---GDT 643
Query: 521 TERGNPERVD 530
+R NP VD
Sbjct: 644 DDRNNPTLVD 653
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR + SL+G+R ++A+ G T +
Sbjct: 447 GPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAV 506
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + KLV P V +++ F Q A G+
Sbjct: 507 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVALVEHNF-CQVACGH 563
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G VY +LG + + + P + G L V +IA G ++ L
Sbjct: 564 SLTVALTTSGHVYAMGSPVYGQLG-NPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLT 622
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
+ VY+ G G G+LGHG D +P L++ + +++ + AA H V
Sbjct: 623 LRNE---VYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAICLHKWV 679
Query: 376 VGQDGRVCT 384
G D +C+
Sbjct: 680 SGVDQSMCS 688
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ VG GLG K+ D P+ +E +L++Q + A G HAA+V + G + +WG
Sbjct: 308 HRVGSGLGVKI------DSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEE 359
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGHG + PK++ AL++ VA G+Y T V+ GD+Y++G G +N
Sbjct: 360 SGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNG-----AYN 414
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
G GN+ ++ + ++ L+ + +S + W HT +T +G+L+ FG G
Sbjct: 415 YGLLGHGNQVSHWVPKRVNGPLEG-----IHVSYISCGPW--HTAVVTSAGQLFTFGDGT 467
Query: 509 KGQLG 513
G LG
Sbjct: 468 FGALG 472
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS GQLG+ + + R L + + A GA
Sbjct: 558 QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYH 617
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ +VY +GK + G +G T +P LV++LK+ V A G FTA +
Sbjct: 618 VAVLTLRNEVYTWGKGANGRLGHG--DTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 25/298 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 272 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+F WG++ A G++ +P + G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLT---QDG 255
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 385
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++
Sbjct: 256 KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSF 312
Query: 386 GWGRYGCLGHGNE-----ECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYS 436
G G GC E + +V A L DV+ H+ G Y FV + D S
Sbjct: 313 GRGP-GCASRSPHPGALAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQKDTSS 369
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 35/334 (10%)
Query: 186 WR---PRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
WR PRP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGPRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 414
+ L V AAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPLAQV--AAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ ++ G T V+++DG V++FG LGH+ A+ +G PQLV +++
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286
Query: 475 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
V QI + HT A + +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
++Q A+G + L L S V S G G+LG + P I + L++ +
Sbjct: 25 LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHV--AL 79
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 424
V+ G H+ V GRV WG G LG G +E +PK ++ L +K I VA G Y
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +SEDG V+S+G L G G + +PQ V SL+ I L
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
H+FAL+ SG + +G+ + GQL + N +R P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKP 227
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 20/263 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L +G V + + +LG P +P + LE + V ++ G
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G+LG G + P+ I+ L ++ + VA G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +DG+V +WG +G LG G E ++ P+ V++L + VA G + +F +S
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G + +G + L + N P + +LK + VV IS
Sbjct: 199 SGTSFGWGSNNAGQLALSG-----NNAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT LT+ GK++ FG GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSN++GQL G+ + ++P I +L+ + ++ +
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG +S+G + G T PQLVE ++ + V Q G+ T
Sbjct: 244 GYKHTAVLTQDGKVFTFGDNSYG--QLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYIYTTGQVVSFGRG 315
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 157/341 (46%), Gaps = 40/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q G L++ G+V+ +G+DS G +G + K P LVES
Sbjct: 252 PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVES 309
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L V A G + + +S G ++T WG+ LGH T+ + P + G LE
Sbjct: 310 LAITNVTFVACGEYHSCAVSTSGDLFT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG 367
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 362
+ VV +A G + ALA S +++ G G G LGHG+R +P+ + QLL+ +
Sbjct: 368 LQVVAVACG-TWHSALAT--SNGKLFTFGDGRFGVLGHGNRASVAYPK---EVQLLSGYK 421
Query: 363 PVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ VA G WH+A + R+ TWG G LGH N+E P V A+ +
Sbjct: 422 AIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE 481
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
VA G T ++ G V+S G LG N +DG+ P LV K
Sbjct: 482 YNFHQVACGYTMTVALTASGHVFSMGGTTYGQLG-NPNSDGK--------VPILVRD-KL 531
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V E V +IS + H LT +LY +G G G+LG
Sbjct: 532 VGEFVEEISCGAN-----HVAVLTSRSELYTWGRGANGRLG 567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 149/312 (47%), Gaps = 35/312 (11%)
Query: 216 GQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G+V+A G D G T ++T P+ +ES + V Q G+ A+++R+G V+
Sbjct: 225 GEVWADGNSFDGLGSQLQAFCKTDVLT-PKPLESDVVLDVHQIGPGDRHIALVTRQGEVF 283
Query: 274 TFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
T WG D+ RLGH E + PH L+ +L V +A G + A++ + +
Sbjct: 284 T--WGEDSGGRLGHGFEKDFGRPH-LVESLAITNVTFVACGEYHSCAVSTS-GDLFTWGD 339
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G LGHG+ P+ + L LQ V VA G WH+A+ +G++ T+G GR+G
Sbjct: 340 GTHGAGLLGHGTDVSYWIPKRVSG-PLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFG 398
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD----------VYSFGCGE 441
LGHGN + PK VQ L+ KAI VA G + + + + D ++++G G+
Sbjct: 399 VLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGD 458
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH N+ L P V ++ + N V T T ALT SG +
Sbjct: 459 QYRLGH-------ANKET-YLEPTCVAAVAEYNFHQVACGYT-------MTVALTASGHV 503
Query: 502 YAFGAGDKGQLG 513
++ G GQLG
Sbjct: 504 FSMGGTTYGQLG 515
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AV++ G ++++G ++ +G LGHGT W P+ + L+G++++ A G +
Sbjct: 321 GEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHS 380
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L + G+++ FG FG +G + + V P+ V+ L ++ A G + +A +
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACGVWHSAAIIDV 438
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ R++T+ G+ RLGH + +EP + E Q+A GY +AL
Sbjct: 439 MDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE-YNFHQVACGYTMTVAL 497
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+S+G G+LG+ + +D K P L+ +L+ ++ GA H AV+
Sbjct: 498 TA--SGH-VFSMGGTTYGQLGNPN-SDGKVPILVRD-KLVGEFVEEISCGANHVAVLTSR 552
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+ TWG G G LGHG+ + + P +V+AL D +++ G T +
Sbjct: 553 SELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGSTFTSCI 601
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAG 207
Q G ++A+T+ G V+S G + GQLG+ ++ + P +R L G + + + GA
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGK-VPILVRDKLVGEFVEEISCGAN 544
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+++ ++Y +G+ + G +G K SP LVE+LK+ V + G+ FT+ +
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDK--KSPTLVEALKDRHVKNISCGSTFTSCI 601
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1160
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 174/387 (44%), Gaps = 40/387 (10%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAAAGAGRTM 210
G ++AV S G Y++G N+ GQLG GT + +P +P + +Q +AG +++
Sbjct: 677 GFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSL 736
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIFVVQAAIGNFFTAVLS 267
+ G VYA+G + G+ G G +++ + + VQ + G + + L
Sbjct: 737 AVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALD 796
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-------VVQIAAGYCYLLALA 320
G ++ + + LG+ N P TL P +Q++ G+ + A+
Sbjct: 797 ARGNIWAWGFNQFGELGNGNNINSAIP-----TLAQYPRDAGTVTAIQVSGGFHHTAAID 851
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQD 379
+ + +S G G+LG+G+ D P ++ + ++ + V+AGA H+ ++
Sbjct: 852 TKGN---TWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTK 908
Query: 380 GRVCTWGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G WGW + G LG+G+ ++ P K + V AI V+ G Y + + ++G+
Sbjct: 909 GNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNA 968
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+++G +S LG + + P LV K V + ++ Y H+
Sbjct: 969 WAWGGNDSGELGIGTTSKSE--------IPALVQYPKNAGA-VTTVQVSAGGY---HSLG 1016
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQT 521
+ + GK +A+G GQLG ++N +
Sbjct: 1017 IDKEGKTWAWGYNQFGQLGNGTISNSS 1043
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 23/321 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ------GIRIIQA 202
Q AG S+AV S G VY++G+N SGQLG+G++ + P+R + G+ +Q
Sbjct: 727 QVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSS-GGYSTVPLRVIDPNDPRSGLTAVQV 785
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNF 261
+AG ++ + G ++A+G + FGE G + + T Q + +Q + G
Sbjct: 786 SAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFH 845
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE--NIPVVQIAAGYCYLLAL 319
TA + +G +++ W +LG+ + P P+ + + +Q++AG + L +
Sbjct: 846 HTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLII 905
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPVVVAAGAWHAA 374
+ + ++ G G+LG+GS + + +P + E + + V+AG +H+
Sbjct: 906 DTKGN---TWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTA--IQVSAGGYHSL 960
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVVSED 431
+ ++G WG G LG G +P +VQ + V + V+ G Y + + ++
Sbjct: 961 AIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKE 1020
Query: 432 GDVYSFGCGESASLGHNAIAD 452
G +++G + LG+ I++
Sbjct: 1021 GKTWAWGYNQFGQLGNGTISN 1041
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 48/345 (13%)
Query: 195 QGIRIIQAAAGA-----GRTMLISDAGQVYAFGKDSFGEAEYGV--QGTKLVTSPQLVES 247
QGI+ Q + G T+ + G YA+G++++G+ G Q K V + +
Sbjct: 660 QGIKFNQISGSRDFGDRGFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGA 719
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT------------EPNDVE 293
+ VQ + G+ + + +G Y ++WGN+ +LG+ + +PND
Sbjct: 720 SADFTYVQVSAGDEQSLAVGSDG--YVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPR 777
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
+ VQ++AGY + LAL + + +++ G G+LG+G+ + P L
Sbjct: 778 --------SGLTAVQVSAGYYHSLALDARGN---IWAWGFNQFGELGNGNNINSAIPTLA 826
Query: 354 EQFQLL-NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ + + + V+ G H A + G +WGW +G LG+GN ++P VQ D
Sbjct: 827 QYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRD 886
Query: 413 ---VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
V+AI V+ G + ++ G+ +++G + LG+ G + AN + P +V
Sbjct: 887 AGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGN-----GSSSADANPV-PGMVKY 940
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ V I ++ Y H+ A+ ++G +A+G D G+LGI
Sbjct: 941 PENAGT-VTAIQVSAGGY---HSLAIDKNGNAWAWGGNDSGELGI 981
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 16/355 (4%)
Query: 80 FFRQPANFAPDY---QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFL 136
++PA + D+ Q+S + +L + ++ Q GG + LR +
Sbjct: 712 IVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVI 771
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP---RPIRS 193
+ Q AG HS+A+ ++G ++++G N G+LG+G P + R
Sbjct: 772 DPNDPRSGLTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRD 831
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIF 252
+ IQ + G T I G +++G + FG+ G + P Q +
Sbjct: 832 AGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVR 891
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLEN---IPVVQ 308
+Q + G + ++ +G + + W LG+ + D P P ++ EN + +Q
Sbjct: 892 AIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQ 951
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVA 367
++AG + +LA +G A ++ G G+LG G+ + + P L++ + + V V+
Sbjct: 952 VSAGGYH--SLAIDKNGNA-WAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVS 1008
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
AG +H+ + ++G+ WG+ ++G LG+G S+P V A N + I T D
Sbjct: 1009 AGGYHSLGIDKEGKTWAWGYNQFGQLGNGTISNSSIPTPV-AFNLSQVISSVTFD 1062
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)
Query: 134 RFLLAGEACCRRE---NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
++L+ E E N +++A G H++AVT G +Y+ GSN GQLGH + +
Sbjct: 39 NYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKI 98
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLV 245
P ++ + + A G +M +++ GQ+Y +G DS G E + G+Q P++V
Sbjct: 99 P--GVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQ-----YKPKIV 151
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 303
++L ++ +VQ + G L+ G +YT WG++ +LG P +V L+ +L
Sbjct: 152 KTLASMLLVQISCGYKHCMALTNHGELYT--WGSNEFGQLGLGLGPGNVSKPTLVNSLVG 209
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+P+ IA G + + SG AV+ G G+LG S+T P ++ + + ++
Sbjct: 210 LPISFIACGGYH--SFVVSKSG-AVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVK- 265
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 422
+A G + + DG V T G G YG LGHG+ E VP+ V L V G
Sbjct: 266 -YIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 324
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV---------TSLKQV 473
+T +V G VYSFG G LG + N TPQLV TS+ +
Sbjct: 325 HTLTLVPSKGRVYSFGLGSVGQLGTKS--------SINSNTPQLVLGPWLSPSGTSMIET 376
Query: 474 NERVVQISL 482
N++ V S+
Sbjct: 377 NKQYVVKSI 385
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 33/355 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFG 222
+Y +G+ +G+LG G EE + P I + + + I++ A G T+ +++ GQ+YA G
Sbjct: 20 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 281
+ FG+ + TKL Q + ++++ + A G + L+ G++YT WG+D+
Sbjct: 80 SNDFGQLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSC 133
Query: 282 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKL 339
+LG T+ ++ TL ++ +VQI+ GY + +AL +Y+ G G
Sbjct: 134 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLG 190
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
+ P L+ L+ L +A G +H+ VV + G V WG +G LG ++
Sbjct: 191 LGLGPGNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQT 248
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
S P ++ + VK ++A G+ + ++ DG V++ G G LGH + +
Sbjct: 249 SLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF--------S 300
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
N + P+ V L+ + V Q++ HT L S G++Y+FG G GQLG
Sbjct: 301 NEIVPRKV--LELMGSTVTQVTCGRR-----HTLTLVPSKGRVYSFGLGSVGQLG 348
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 145/272 (53%), Gaps = 10/272 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKD 224
V+S+G GQLG G T ++ P + +L+G+ II G+ T ++ G +Y +G
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
+G+ +G + ++P+ VE+L + +V A G+ TAV++ +G +YT+ + G
Sbjct: 61 MYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAG 118
Query: 285 H-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
H TE + P LL L VVQ++A C AC ++ G G G+LG+G+
Sbjct: 119 HGDTEGHQYTP-KLLERLNGKKVVQLSA--CG-FHTACLTDDHETFAWGEGKFGRLGNGT 174
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ PRLIE L+ P VA G +H+AV+ +DG++ T+G G +G LGH ++ +
Sbjct: 175 ERNCHSPRLIE--SLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLK 232
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
P +V+AL+ V + G + ++ +G+ +
Sbjct: 233 PTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 37/293 (12%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFS 276
V+++G+ + + G+ T P V++L+ + + G++ TA ++ G +YT+
Sbjct: 1 VFSWGRGE--DGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58
Query: 277 WGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
G +LGH H+ P VE L + +V IA G + A S +Y+
Sbjct: 59 GGMYGKLGHGNESGHSTPRRVEA------LVGLSIVDIACGSRHT---AVVTSKGCLYTW 109
Query: 332 GCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G GHG ++ P+L+E+ LN + VV ++A +H A + D WG G+
Sbjct: 110 GDKENGVAGHGDTEGHQYTPKLLER---LNGKKVVQLSACGFHTACLTDDHETFAWGEGK 166
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG+G E P+++++L VA G + + V++ DG +Y+FG GE LGH
Sbjct: 167 FGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH-- 224
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
AD N L P LV +L V V QI+ W +H+ ALT G+ +
Sbjct: 225 -AD-----KVNKLKPTLVEALDGV--VVKQITCG----W-SHSVALTSEGEYH 264
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G G+LG G +D+ P ++ + + + V G++H A V +G + TWG
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGI-ITHVTCGSYHTAAVASNGDLYTWGG 59
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGNE S P+ V+AL + + +A G T VV+ G +Y++G E+ GH
Sbjct: 60 GMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
G+ + TP+L+ L ++VVQ+S HT LT+ + +A+G G
Sbjct: 120 -------GDTEGHQYTPKLLERLN--GKKVVQLSAC-----GFHTACLTDDHETFAWGEG 165
Query: 508 DKGQLGIELVNNQTER 523
G+LG N TER
Sbjct: 166 KFGRLG-----NGTER 176
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 25/243 (10%)
Query: 275 FSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSV 331
FSWG D +LG + EP + L + ++ + G + A+A S +Y+
Sbjct: 2 FSWGRGEDGQLGIGDTSDQDEP-TYVDALRGVGIITHVTCGSYHTAAVA---SNGDLYTW 57
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+ GKLGHG+ + PR +E L+ L V +A G+ H AVV G + TWG G
Sbjct: 58 GGGMYGKLGHGNESGHSTPRRVEA--LVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENG 115
Query: 392 CLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
GHG+ E + PK+++ LN K + ++ + T +++D + +++G G+ LG+
Sbjct: 116 VAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGT- 174
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
N +P+L+ SL + + Q++ H+ +T GK+Y FG G+ G
Sbjct: 175 -------ERNCHSPRLIESL--IGKYPCQVACGG-----FHSAVITRDGKMYTFGGGEHG 220
Query: 511 QLG 513
QLG
Sbjct: 221 QLG 223
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 52/226 (23%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+ G H+ AV S G +Y++G G+LGHG PR + +L G+ I+ A G+
Sbjct: 36 THVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSR 95
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYG--------------VQGTKLVT------------- 240
T +++ G +Y +G G A +G + G K+V
Sbjct: 96 HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155
Query: 241 ------------------------SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
SP+L+ESL + Q A G F +AV++R+G++YTF
Sbjct: 156 DHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFG 215
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G +LGH + N ++P L+ L+ + V QI G+ + +AL +
Sbjct: 216 GGEHGQLGHADKVNKLKP-TLVEALDGVVVKQITCGWSHSVALTSE 260
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS +T G +Y+FG GQLGH + +P + +L G+ + Q G
Sbjct: 194 QVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSH 253
Query: 209 TMLISDAGQVY 219
++ ++ G+ +
Sbjct: 254 SVALTSEGEYH 264
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 52/377 (13%)
Query: 166 VYSFGSNSSGQLGHGTT--------EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
VY++G+ + GQLGHG+ EE P+ +L+G I GA + I + G+
Sbjct: 71 VYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEGK 130
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+Y +G + + + G + +++ T P+ VE+LK I +V + G++FTA + +G++Y++ W
Sbjct: 131 LYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGW 189
Query: 278 GNDARLGHHTEPNDV---EPHP-LLGTL--ENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
G G + EP P LL TL + +P+ + G + +AL +++
Sbjct: 190 GGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGE---IWAW 246
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G G+LG+G + P IE F N+ V +AAG + + G + +WG
Sbjct: 247 GNGEYGRLGNGESDTCEVPEPIEFFSKDNV--VSIAAGRDFSFALTDKGELYSWGGNSQN 304
Query: 392 CLGHGN------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
LG G ES+P +V+A N + +A G V+EDG +Y +G
Sbjct: 305 QLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWGA------ 358
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+ P +T++ + ++ Q++ +T LT+ GK++ FG
Sbjct: 359 -------------KIWIEPHEMTAVNE--HKMTQVACGRQ-----YTVGLTDDGKVFTFG 398
Query: 506 AGDKGQLGIELVNNQTE 522
G LG NQ +
Sbjct: 399 KGSSNCLGHGDRKNQLQ 415
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 158/334 (47%), Gaps = 37/334 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS A+ +G +Y +GSN +LG G ++E E PR + +L+GI+I+ + G T
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAA 177
Query: 212 ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVL 266
+ + G++Y++G G G G K +P+L+ +L + + + G F T L
Sbjct: 178 VDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVAL 237
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+++G ++ + G RLG+ P P+ VV IAAG + AL +
Sbjct: 238 TKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFSFALTDKGE-- 294
Query: 327 AVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+YS G G+GG L E P L+E F L ++ + AAG HAA V +DG
Sbjct: 295 -LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQI--AAGYDHAAAVTEDG 351
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
R+ WG + P + A+N+ K VA G T +++DG V++FG G
Sbjct: 352 RLYMWG-----------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKG 400
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
S LGH G+R N L P + +L VN
Sbjct: 401 SSNCLGH-------GDRK-NQLQPVKIQALAGVN 426
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 19/207 (9%)
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGS--------RTDEKHPRLIEQFQLLNLQPVVVA 367
+L A + +VY+ G G G+LGHGS +E P+L E + + V
Sbjct: 59 VLRTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEF- 117
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 426
GA H+A + ++G++ WG Y LG G + E E++P+ V+AL +K + V+ GDY T
Sbjct: 118 -GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTA 176
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
V EDG +YS+G G S + TP+L+T+L V++ V ++
Sbjct: 177 AVDEDGKMYSWGWGGST---MKGAGGLGHAGGKDEPTPRLLTTL--VDQGVPIATVECGE 231
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLG 513
+ HT ALT+ G+++A+G G+ G+LG
Sbjct: 232 F---HTVALTKDGEIWAWGNGEYGRLG 255
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 27/312 (8%)
Query: 208 RTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
RT + VY +G + G+ + G++ +P+L E+L+ + G
Sbjct: 61 RTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGAS 120
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 320
+A + EG++Y + ++LG E +++E P + L+ I +V ++ G Y A
Sbjct: 121 HSAAIDEEGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGIKIVDVSCG-DYFTAAV 178
Query: 321 CQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+ M YS G G G LGH DE PRL+ + V G +H
Sbjct: 179 DEDGKM--YSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ +DG + WG G YG LG+G + VP+ ++ + + +A G +F +++ G++Y
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELY 296
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
S+G LG I G N+ + P LV + + V QI+ H A
Sbjct: 297 SWGGNSQNQLG---IGGGLAMDVYNIESIPVLVEAFNGL--LVKQIAAGYD-----HAAA 346
Query: 495 LTESGKLYAFGA 506
+TE G+LY +GA
Sbjct: 347 VTEDGRLYMWGA 358
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+T G ++++G+ G+LG+G ++ P PI ++ AAG + +
Sbjct: 230 GEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFAL 289
Query: 213 SDAGQVYAFGKDSFGEAEYGVQG------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+D G++Y++G +S + + G+ G + + P LVE+ + V Q A G A +
Sbjct: 290 TDKGELYSWGGNS--QNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAV 347
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +GR+Y WG A++ +EPH + E+ + Q+A G Y + L
Sbjct: 348 TEDGRLYM--WG--AKIW-------IEPHEMTAVNEH-KMTQVACGRQYTVGLTDDGK-- 393
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
V++ G G LGHG R ++ P I+ +N+ V+ G +H +
Sbjct: 394 -VFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITS--VSCGDYHMGAI 440
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 263 TAVLSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
TA + + VYT+ G +LGH + ++ P L LE + + G
Sbjct: 62 TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTP-KLTEALEGKAITHVEFGAS 120
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ A+ + +Y G KLG G ++ E PR +E + ++ V V+ G +
Sbjct: 121 HSAAIDEEGK---LYVWGSNEYSKLGLGESSEMETLPREVEALK--GIKIVDVSCGDYFT 175
Query: 374 AVVGQDGRVCTWGWG-----RYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTF 426
A V +DG++ +WGWG G LGH + E P+++ L D V V G++ T
Sbjct: 176 AAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTV 235
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+++DG+++++G GE LG N +D P+ + + N VV I+
Sbjct: 236 ALTKDGEIWAWGNGEYGRLG-NGESD-------TCEVPEPIEFFSKDN--VVSIAAGRDF 285
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLGI 514
+FALT+ G+LY++G + QLGI
Sbjct: 286 -----SFALTDKGELYSWGGNSQNQLGI 308
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 145 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHG------TTEEEWRPRPIRSLQGI 197
++N +IA G S A+T KG +YS+G NS QLG G E P + + G+
Sbjct: 273 KDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGL 332
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ Q AAG +++ G++Y + G K+ P + ++ + Q A
Sbjct: 333 LVKQIAAGYDHAAAVTEDGRLYMW-------------GAKIWIEPHEMTAVNEHKMTQVA 379
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G +T L+ +G+V+TF G+ LGH N ++P + L + + ++ G ++
Sbjct: 380 CGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQ-ALAGVNITSVSCGDYHMG 438
Query: 318 ALA 320
A+A
Sbjct: 439 AIA 441
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L + P +G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313
Query: 387 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 427
G GC H E + +V A L DV+ H+ G Y FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)
Query: 186 WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
WR RP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 414
+ L V AAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPLAQV--AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ ++ G T V+++DG V++FG LGH+ A+ +G PQLV +++
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286
Query: 475 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
V QI + HT A + +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
++Q A+G + L L S V S G G+LG + P I + LN+ +
Sbjct: 25 LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNV--AL 79
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 424
V+ G H+ V GRV WG G LG G +E +PK ++ L +K I VA G Y
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +SEDG V+S+G L G G + +PQ V SL+ I L
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
H+FAL+ SG + +G+ GQL + N +R P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKP 227
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L +G V + + +LG P +P + LE + V ++ G
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G+LG G + P+ I+ L ++ + VA G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +DG+V +WG +G LG G E ++ P+ V++L + VA G + +F +S
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ N P + +LK + VV IS
Sbjct: 199 SGT--SFGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT LT+ GK++ FG GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L + P +G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313
Query: 387 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 427
G GC H E + +V A L DV+ H+ G Y FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)
Query: 186 WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
WR RP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 414
+ L V AAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPLAQV--AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ ++ G T V+++DG V++FG LGH+ A+ +G PQLV +++
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286
Query: 475 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
V QI + HT A + +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
++Q A+G + L L S V S G G+LG + P I + LN+ +
Sbjct: 25 LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNV--AL 79
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 424
V+ G H+ V GRV WG G LG G +E +PK ++ L +K I VA G Y
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +SEDG V+S+G L G G + +PQ V SL+ I L
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
H+FAL+ SG + +G+ GQL + N +R P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKP 227
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L +G V + + +LG P +P + LE + V ++ G
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G+LG G + P+ I+ L ++ + VA G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +DG+V +WG +G LG G E ++ P+ V++L + VA G + +F +S
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ N P + +LK + VV IS
Sbjct: 199 SGT--SFGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT LT+ GK++ FG GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 187/372 (50%), Gaps = 43/372 (11%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS+A+ G V+++G+N GQLG+GT + + P ++ L+ ++ AAG+
Sbjct: 401 AIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQVKGLK--DVVAIAAGSDH 458
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ G V+A+G + FG+ G G + P V+ LK+ VV A G+ + L
Sbjct: 459 SLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKD--VVAVAAGSVHSLALK 516
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGM 326
++G ++ +WG++ H ND+E + ++ + VV IAAG + L L +
Sbjct: 517 KDGTIW--AWGSNY---HGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVW 571
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
A V L ++ RL+ Q+ L+ VV +AAG H+ + +DG V
Sbjct: 572 AWGEVWFDL----------LNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTV 621
Query: 383 CTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
WG +G LG+ E S VP V+ L D+ AI ATG++ + + +DG V+++G
Sbjct: 622 WAWGDNFFGQLGNSPREKYSLVPVQVKGLKDILAI--ATGEWHSLAIKKDGTVWAWGENS 679
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+ LG+ ++++ V P V +K V ++++ Y H+ AL + G +
Sbjct: 680 TGQLGNETSGK---DKYSYV--PVQVKGIKDV------LAISAGSY---HSLALKKDGTV 725
Query: 502 YAFGAGDKGQLG 513
+ +GA +GQLG
Sbjct: 726 WGWGANARGQLG 737
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 178/360 (49%), Gaps = 45/360 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+++G+N GQLG+G +E+ + P +++L+ ++ AAG ++
Sbjct: 254 AGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLK--DVVAIAAGENHSLA 311
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G ++A+G + +G+ G ++ + P +SLK+ VV A G + L ++G
Sbjct: 312 LKKDGTIWAWGDNEWGQ--LGNSISEKLCVPVQFKSLKD--VVAIAAGCEHSLALKKDGT 367
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ SWGN+ +LG+ + P + G + VV IA G + LAL + V+
Sbjct: 368 VW--SWGNNYYGQLGNGNSIDSYVPVQVRGLKD---VVAIATGNAHSLALKKDGT---VW 419
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG+G+ P Q+ L+ VV +AAG+ H+ +DG V WG
Sbjct: 420 AWGNNEFGQLGNGTNKSSFVP-----VQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNN 474
Query: 389 RYGCLGHGN---EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
+G LG+G+ + +VP V+ L DV + VA G + + +DG ++++G L
Sbjct: 475 EFGQLGNGSGGYGQYYAVPVQVKGLKDV--VAVAAGSVHSLALKKDGTIWAWGSNYHGLL 532
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GN P V LK VV I+ ++ H+ L + G ++A+G
Sbjct: 533 ---------GNDIERSFVPVQVKGLKD----VVAIAAGSN-----HSLVLKKDGTVWAWG 574
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 40/366 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 210
AG HS+ + G V+++GSN GQLG+ E+ P++ ++G++ ++ AAG G ++
Sbjct: 101 AGRYHSLTLKKDGTVWAWGSNKDGQLGN-RDAGEYSIVPVQ-VKGLKDVVAIAAGDGYSL 158
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ G V+ +G E+ + G+ K + P ++ LK+ VV A G ++ L ++
Sbjct: 159 GLKKDGTVWCWG---LNESIQVIDGSNKDFSVPFQIKGLKD--VVAIAAGKDYSLALKKD 213
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAV 328
G V+ + + + ++ P P+ +E + VV IAAG + LAL + V
Sbjct: 214 GTVWMWEYKYNYYEQLRRGADEYSPVPV--QVEGLKDVVAIAAGRYHSLALKKDGT---V 268
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 387
++ G G+LG+G D P Q+ NL+ VV +AAG H+ + +DG + WG
Sbjct: 269 WAWGNNYYGQLGNGKSEDSYDP-----VQVKNLKDVVAIAAGENHSLALKKDGTIWAWGD 323
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+G LG+ E VP ++L DV AI A G + + +DG V+S+G LG+
Sbjct: 324 NEWGQLGNSISEKLCVPVQFKSLKDVVAI--AAGCEHSLALKKDGTVWSWGNNYYGQLGN 381
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
D P V LK VV I+ NAH+ AL + G ++A+G
Sbjct: 382 GNSIDS--------YVPVQVRGLKD----VVAIATG-----NAHSLALKKDGTVWAWGNN 424
Query: 508 DKGQLG 513
+ GQLG
Sbjct: 425 EFGQLG 430
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 55/376 (14%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+S+G+N GQLG+G + + + P +R L+ ++ A G ++
Sbjct: 354 AGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK--DVVAIATGNAHSLA 411
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + FG+ G + V P V+ LK+ VV A G+ + ++G
Sbjct: 412 LKKDGTVWAWGNNEFGQLGNGTNKSSFV--PVQVKGLKD--VVAIAAGSDHSLAFKKDGT 467
Query: 272 VYTFSWGND--ARLG--------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
V+ +WGN+ +LG ++ P V+ VV +AAG + LAL
Sbjct: 468 VW--AWGNNEFGQLGNGSGGYGQYYAVPVQVKGLK--------DVVAVAAGSVHSLALKK 517
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
+ +++ G G LG+ R Q+ L+ VV +AAG+ H+ V+ +DG
Sbjct: 518 DGT---IWAWGSNYHGLLGNDIE------RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDG 568
Query: 381 RVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V WG + L + SVP ++ L DV AI A G++ + + +DG V+++G
Sbjct: 569 TVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAI--AAGEHHSLGLKKDGTVWAWGD 626
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
LG++ R L P V LK + +++ + H+ A+ + G
Sbjct: 627 NFFGQLGNSP-------REKYSLVPVQVKGLKDI------LAIATGEW---HSLAIKKDG 670
Query: 500 KLYAFGAGDKGQLGIE 515
++A+G GQLG E
Sbjct: 671 TVWAWGENSTGQLGNE 686
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 45/368 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG G+S+ + G V+ +G N S Q+ G+ ++ P I+ L+ ++ AAG ++
Sbjct: 152 AGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLK--DVVAIAAGKDYSLA 209
Query: 212 ISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ G V+ + + + + G V P VE LK+ VV A G + + L ++
Sbjct: 210 LKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQVEGLKD--VVAIAAGRYHSLALKKD 265
Query: 270 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGM 326
G V+ +WGN+ +LG+ + +P + +N+ VV IAAG + LAL +
Sbjct: 266 GTVW--AWGNNYYGQLGNGKSEDSYDPVQV----KNLKDVVAIAAGENHSLALKKDGT-- 317
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
+++ G G+LG + +L Q +L+ VV +AAG H+ + +DG V +W
Sbjct: 318 -IWAWGDNEWGQLG-----NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSW 371
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LG+GN VP V+ L DV AI ATG+ + + +DG V+++G E L
Sbjct: 372 GNNYYGQLGNGNSIDSYVPVQVRGLKDVVAI--ATGNAHSLALKKDGTVWAWGNNEFGQL 429
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G+ + + P V LK VV I+ + H+ A + G ++A+G
Sbjct: 430 GNGT--------NKSSFVPVQVKGLKD----VVAIAAGSD-----HSLAFKKDGTVWAWG 472
Query: 506 AGDKGQLG 513
+ GQLG
Sbjct: 473 NNEFGQLG 480
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 41/311 (13%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIR-IIQAAAGAGRT 209
AG HS+A G V+++G+N GQLG+G+ ++ P++ ++G++ ++ AAG+ +
Sbjct: 454 AGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQ-VKGLKDVVAVAAGSVHS 512
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLS 267
+ + G ++A+G + +G+ G + S P V+ LK+ VV A G+ + VL
Sbjct: 513 LALKKDGTIWAWGSN-----YHGLLGNDIERSFVPVQVKGLKD--VVAIAAGSNHSLVLK 565
Query: 268 REGRVYTFSWG--------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
++G V+ +WG ++RL + + P ++ VV IAAG + L L
Sbjct: 566 KDGTVW--AWGEVWFDLLNENSRLVYSSVPVQIKGLK--------DVVAIAAGEHHSLGL 615
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ V++ G G+LG+ R EK+ + Q + L + +A G WH+ + +D
Sbjct: 616 KKDGT---VWAWGDNFFGQLGNSPR--EKYSLVPVQVKGLK-DILAIATGEWHSLAIKKD 669
Query: 380 GRVCTWGWGRYGCLGH---GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G V WG G LG+ G ++ VP V+ + DV AI + G Y + + +DG V+
Sbjct: 670 GTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLAI--SAGSYHSLALKKDGTVWG 727
Query: 437 FGCGESASLGH 447
+G LG+
Sbjct: 728 WGANARGQLGN 738
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 149/320 (46%), Gaps = 40/320 (12%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
IIQ AAG ++ + G V+A+G + +G+ G + + ++ P V+ LK+ VV A
Sbjct: 47 NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQC--GTEESSII--PVKVKGLKD--VVAIA 100
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYL 316
G + + L ++G V+ + D +LG+ + P + G + VV IAAG Y
Sbjct: 101 AGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKD---VVAIAAGDGYS 157
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 375
L L + V+ G ++ GS D P FQ+ L+ VV +AAG ++
Sbjct: 158 LGLKKDGT---VWCWGLNESIQVIDGSNKDFSVP-----FQIKGLKDVVAIAAGKDYSLA 209
Query: 376 VGQDGRVCTW--GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ +DG V W + Y L G +E VP V+ L DV AI A G Y + + +DG
Sbjct: 210 LKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAI--AAGRYHSLALKKDGT 267
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
V+++G LG+ D P V +LK VV I+ + H+
Sbjct: 268 VWAWGNNYYGQLGNGKSEDS--------YDPVQVKNLKD----VVAIAAGEN-----HSL 310
Query: 494 ALTESGKLYAFGAGDKGQLG 513
AL + G ++A+G + GQLG
Sbjct: 311 ALKKDGTIWAWGDNEWGQLG 330
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 130/250 (52%), Gaps = 22/250 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G ++++GSN G LG+ E + P ++ L+ ++ AAG+ +++
Sbjct: 507 AGSVHSLALKKDGTIWAWGSNYHGLLGN-DIERSFVPVQVKGLK--DVVAIAAGSNHSLV 563
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ G V+A+G+ F + ++LV S P ++ LK+ VV A G + L ++
Sbjct: 564 LKKDGTVWAWGEVWFDLLN---ENSRLVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKD 618
Query: 270 GRVYTFSWGND--ARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G V+ +WG++ +LG+ E + P + G + ++ IA G + LA+ +
Sbjct: 619 GTVW--AWGDNFFGQLGNSPREKYSLVPVQVKGLKD---ILAIATGEWHSLAIKKDGT-- 671
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG+ + +K+ + Q + + + ++AG++H+ + +DG V WG
Sbjct: 672 -VWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK-DVLAISAGSYHSLALKKDGTVWGWG 729
Query: 387 WGRYGCLGHG 396
G LG+G
Sbjct: 730 ANARGQLGNG 739
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIR-IIQAAAGA 206
AIA G HS+A+ G V+++G NS+GQLG+ T+ ++++ P++ ++GI+ ++ +AG+
Sbjct: 655 AIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQ-VKGIKDVLAISAGS 713
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
++ + G V+ +G ++ G+ G G Q++
Sbjct: 714 YHSLALKKDGTVWGWGANARGQLGNGGAGVYSTVPVQVI 752
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 158/341 (46%), Gaps = 40/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G L++ G+V+ +G++S G +G + + P+LVE
Sbjct: 256 PKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETD--FSCPRLVEF 313
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L V A G + T ++ G +YT WG+ R LG T+ + P + G LE
Sbjct: 314 LAVTNVDFVACGEYHTCAVTTSGDLYT--WGDGTRNAGLLGQGTDVSHWIPKRVSGPLEG 371
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 362
+ V IA G + ALA S +++ G G G LGHG R P+ + QLL+ L+
Sbjct: 372 LQVFSIACG-TWHSALAT--SNGKLFTFGDGAFGVLGHGDRESLSFPK---EVQLLSGLK 425
Query: 363 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ VA G WH A V+ Q G ++ TWG G LGHG+++ +P V +L D
Sbjct: 426 TIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLID 485
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N +DG+ P LV
Sbjct: 486 YNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG-NPASDGK--------MPTLVQD-SL 535
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V E V ++S H LT +LY +G G G+LG
Sbjct: 536 VGEFVEEVSCGAH-----HVAVLTSRSELYTWGKGANGRLG 571
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 153/289 (52%), Gaps = 22/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT+ G +Y++G + ++G LG GT W P+ + L+G+++ A G +
Sbjct: 325 GEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHS 384
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
L + G+++ FG +FG +G + + ++ P+ V+ L + ++ A G + TA V
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRES--LSFPKEVQLLSGLKTIKVACGVWHTAAIVEV 442
Query: 266 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+S+ G +++T+ G+ RLGH ++ + P + +L + QIA G +AL
Sbjct: 443 MSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLP-TCVSSLIDYNFHQIACGQTLTVAL 501
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+++G G+LG+ + +D K P L+ Q L+ V+ GA H AV+
Sbjct: 502 TT--SGH-VFTMGGTAHGQLGNPA-SDGKMPTLV-QDSLVGEFVEEVSCGAHHVAVLTSR 556
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
+ TWG G G LGHG+ E P +V+AL D +++ G ++TT +
Sbjct: 557 SELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSI 605
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 135/285 (47%), Gaps = 28/285 (9%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V +P+ +ES + V Q A G A+++R+G V+T+ + RLGH E + P L+
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPR-LV 311
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
L V +A G + A+ + + G G LG G+ P+ + L
Sbjct: 312 EFLAVTNVDFVACGEYHTCAVTTS-GDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSG-PL 369
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
LQ +A G WH+A+ +G++ T+G G +G LGHG+ E S PK VQ L+ +K I V
Sbjct: 370 EGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKV 429
Query: 419 ATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
A G + T V+S+ G ++++G G+ LGH + L P V+
Sbjct: 430 ACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGS--------KDTYLLPTCVS 481
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
SL N QI+ ++ T ALT SG ++ G GQLG
Sbjct: 482 SLIDYN--FHQIACGQTL-----TVALTTSGHVFTMGGTAHGQLG 519
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +++FG + G LGHG E P+ ++ L G++ I+ A G T I
Sbjct: 380 GTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAI 439
Query: 213 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
S +G +++ +G +G + T L+ P V SL + Q A G
Sbjct: 440 VEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLL--PTCVSSLIDYNFHQIACGQTL 497
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG+ + P + +L V +++ G ++ L
Sbjct: 498 TVALTTSGHVFTMGGTAHGQLGNPASDGKM-PTLVQDSLVGEFVEEVSCGAHHVAVLT-- 554
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S +Y+ G G G+LGHG D + P L+E + +++ + + H V G
Sbjct: 555 -SRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSG 613
Query: 378 QDGRVCT 384
D VC+
Sbjct: 614 ADQSVCS 620
>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1080
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 172/396 (43%), Gaps = 49/396 (12%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGS-----NSSGQLGHGTTE--EEWRPRPIRSLQGIRII 200
S ++GP + S G V+ +G NSS LG + P+P+ S + +
Sbjct: 210 SSVVSGPDD---IESLGDVFIWGEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVN 266
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
G L++ G+++ +G+DS G +G K P+LV+SL V A G
Sbjct: 267 YIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFD--KDYGKPRLVDSLAITSVSFVACGE 324
Query: 261 FFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ T +S G +YT+ G N LGH T+ + P + G LE VV IA G +
Sbjct: 325 YHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTAL 384
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVG 377
+ S +++ G G G LGHG R +P+ + QLL+ + V VA G WH A +
Sbjct: 385 IT---SNGKLFTFGDGTLGVLGHGDRESVAYPK---ELQLLSGHKAVKVACGVWHTAAII 438
Query: 378 Q-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+ ++ TWG G LGH N+E P V AL D + VA G
Sbjct: 439 EVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSL 498
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T ++ G V++ G LG N +DG+ P LV Q E V +IS
Sbjct: 499 TVALTASGHVFTMGSKAYGQLG-NPTSDGK--------VPILVRDKLQ-GETVEEISCGT 548
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
H LT +LY +G G G+LG + +Q
Sbjct: 549 H-----HVAVLTSRSELYTWGRGANGRLGHGDIEDQ 579
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 25/292 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AV+ G +Y++G ++++G LGHGT P+ + L+G +++ A GA T
Sbjct: 323 GEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHT 382
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ G+++ FG + G +G + + V P+ ++ L V+ A G + TA +
Sbjct: 383 ALITSNGKLFTFGDGTLGVLGHGDRES--VAYPKELQLLSGHKAVKVACGVWHTAAIIEV 440
Query: 267 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
S +++T+ G+ RLGH + ++P + L + +Q+A G+
Sbjct: 441 NDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQP-TCVAALADYNFLQVACGHSLT 499
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL SG V+++G G+LG+ + +D K P L+ +L ++ G H AV+
Sbjct: 500 VALTA--SGH-VFTMGSKAYGQLGNPT-SDGKVPILVRD-KLQGETVEEISCGTHHVAVL 554
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
+ TWG G G LGHG+ E + P +V+AL + ++A G ++TT +
Sbjct: 555 TSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCI 606
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 154/348 (44%), Gaps = 38/348 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +++ G+V+++G +S G +GV V P+L+ES
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSD--VPHPKLIES 353
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L N + A G + T ++ G +YT+ G N LGH + + P + G LE I
Sbjct: 354 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIH 413
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + + S +++ G G G LGHG R PR IE L L+ V
Sbjct: 414 VSSISCGPWHTAVVT---SSGQLFTFGDGTFGVLGHGDRKSVSLPREIE--SLKGLRTVQ 468
Query: 366 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
A G WH A V + G++ TWG G G LGHG++E + VP V L++
Sbjct: 469 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEP 528
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
VA G T +S G VY+ G LG N ADG+ + TP
Sbjct: 529 NFCQVACGHSMTVALSRLGHVYTMGSCVYGHLG-NTQADGK------LPTPV-------- 573
Query: 474 NERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
E + S I A H LT +++ +G G G LG N++
Sbjct: 574 -EGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDR 620
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 152/346 (43%), Gaps = 72/346 (20%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q IA G H+ VT +G V+S+G S G+LGHG + P+ I SL I A G
Sbjct: 308 QNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEY 367
Query: 208 RTMLISDAGQVYAFGKD------------------------------------------- 224
T ++ +G +Y +G
Sbjct: 368 HTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 427
Query: 225 -------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-------- 266
+FG+ +GV G K V+ P+ +ESLK + VQAA G + TA +
Sbjct: 428 TSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNS 487
Query: 267 ----SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G+++T+ G+ RLGH + + + P ++ TL+ Q+A G+ +AL+
Sbjct: 488 SSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVV-TLDEPNFCQVACGHSMTVALS-- 544
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
VY++G + G LG+ ++ D K P +E +L +A GA+H AV+ V
Sbjct: 545 -RLGHVYTMGSCVYGHLGN-TQADGKLPTPVEG-KLSKSFVEEIACGAYHVAVLTSRTEV 601
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
TWG G GCLGHG+ + P +V+AL D + +A G T +
Sbjct: 602 FTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAI 647
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 149/360 (41%), Gaps = 42/360 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG + PR I SL+G+R +QAA G T +
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAV 479
Query: 213 SDA------------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G+++ +G G +G + +KLV P V +L Q A G+
Sbjct: 480 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV--PTRVVTLDEPNFCQVACGH 537
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T LSR G VYT LG +T+ + P P+ G L V +IA G ++ L
Sbjct: 538 SMTVALSRLGHVYTMGSCVYGHLG-NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLT 596
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S V++ G G G LGHG D P L+E + ++ + AA H V
Sbjct: 597 ---SRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV 653
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 423
G D +C+ + R+ C G C S K A N K V +
Sbjct: 654 SGVDQSMCSGCRVPFNFKRKRHNCYNCGLAFCHSCSNKKSVKASMAPNPNKPYRVCDNCF 713
Query: 424 TTFVVSEDGDVYS------FGCGESASLGHNAIADGQGNRHANVLTP-QLVTSLKQVNER 476
+ + D S G SL N D +R N L + SLKQV+ R
Sbjct: 714 NKIRKTTETDSSSQASMSRRGSVNQGSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSR 773
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G + D P+ +E +L++Q + A G HAA+V + G V +WG G LGHG +
Sbjct: 288 GVKMDSLLPKALESAVVLDVQNI--ACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDV 345
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
PK++++L++ VA G+Y T V+ GD+Y++G G +N G GN+ ++
Sbjct: 346 PHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGT-----YNYGLLGHGNQVSHW 400
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ K+VN + I +++ HT +T SG+L+ FG G G LG
Sbjct: 401 VP-------KRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLG 445
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 40/341 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + Q A G L++ G+V+ +G++S G +G+ + P LVE
Sbjct: 258 PKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVEF 315
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 303
L V A G + T +S G ++T WG N LGH TE + P + G LE
Sbjct: 316 LAVNNVDFVACGEYHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLEG 373
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQ 362
+ V+ +A G + ALA S +++ G G G LGHG R +PR + Q+L+ L+
Sbjct: 374 LQVLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGLK 427
Query: 363 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ VA G WH A V+ Q G ++ TWG G LGHG++E +P V AL D
Sbjct: 428 TIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALID 487
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N ++DG+ P LV K
Sbjct: 488 YNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGR--------LPCLVQD-KL 537
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V E V +IS Y H LT +++ +G G G+LG
Sbjct: 538 VGEFVEEISC--GAY---HVAVLTSRSEVFTWGRGANGRLG 573
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 28/292 (9%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V +P+ +ES + V Q A G A+++R+G V+T+ + RLGH + + PH L+
Sbjct: 255 VLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH-LV 313
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
L V +A G + A++ + + G G LGHG+ P+ + L
Sbjct: 314 EFLAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG-PL 371
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
LQ + VA G WH+A+ +G++ T+G G +G LGHG+ E P+ VQ L+ +K I V
Sbjct: 372 EGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKV 431
Query: 419 ATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
A G + T V+S+ G ++++G G+ LGH + L P V+
Sbjct: 432 ACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGS--------KETYLLPTCVS 483
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+L N Q++ +++ T ALT SG ++ G GQLG L + +
Sbjct: 484 ALIDYN--FHQLACGHTM-----TVALTTSGHVFTMGGTAYGQLGNPLSDGR 528
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 143/340 (42%), Gaps = 69/340 (20%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H VT +G V+++G S G+LGHG + RP + L + A G
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYH 330
Query: 209 TMLISDAGQVYAFGKD-------------------------------------------- 224
T +S +G ++ +G
Sbjct: 331 TCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALAT 390
Query: 225 ------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA----VLSREG- 270
+FG+ +GV G + V P+ V+ L + ++ A G + TA V+S+ G
Sbjct: 391 SNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGT 450
Query: 271 -----RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+++T+ G+ RLGH ++ + P + L + Q+A G+ +AL SG
Sbjct: 451 NISSRKLFTWGDGDKHRLGHGSKETYLLP-TCVSALIDYNFHQLACGHTMTVALTT--SG 507
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+++G G+LG+ +D + P L+ Q +L+ ++ GA+H AV+ V TW
Sbjct: 508 H-VFTMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFVEEISCGAYHVAVLTSRSEVFTW 564
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
G G G LGHG+ E P V+AL D ++ G T
Sbjct: 565 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFT 604
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +++FG + G LGHG E PR ++ L G++ I+ A G T I
Sbjct: 382 GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 441
Query: 213 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
S +G +++ +G +G + T L+ P V +L + Q A G+
Sbjct: 442 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL--PTCVSALIDYNFHQLACGHTM 499
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG+ + P + L V +I+ G ++ L
Sbjct: 500 TVALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQDKLVGEFVEEISCGAYHVAVLT-- 556
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 377
S V++ G G G+LGHG D + P +E + N++ + A+ H V G
Sbjct: 557 -SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSG 615
Query: 378 QDGRVCT 384
D VC+
Sbjct: 616 ADQSVCS 622
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + S G V S G NS GQLG T +P I +L+ + + + G
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + G+ K T P+ +++L I ++Q A G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 EDGQV--FSWGTNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
S G G+ + P I + L + V ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFT 259
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+G YG LGH + P++V+ + + + D+T + G V SFG G
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRG 315
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 21/286 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ A G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L + P +G L+ + VV I+ GY + L
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LGH +++ P+L+E+ + L Q + G+ H A + G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ---IDCGSDHTLAYIYTTGQVVSFG 313
Query: 387 WGRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFV 427
G GC H E + +V A L DV+ H+ G Y FV
Sbjct: 314 RGP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)
Query: 186 WRP---RPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
WR RP+R Q G ++QAA+G ++L+ G V + G +S G+ G +GT
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPR 62
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
P+ + +L+ + V + G + + +GRV+ + ++ +LG +
Sbjct: 63 GEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q+A G+ + +AL+ V+S G G+LG G + P+ + +
Sbjct: 123 KTLAGIKIIQVACGHYHSVALS---EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 414
+ L V AAG H+ + G WG G L G+ P + AL +
Sbjct: 180 GIPLAQV--AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ ++ G T V+++DG V++FG LGH+ A+ +G PQLV +++
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG--------PQLV---ERIE 286
Query: 475 ERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
V QI + HT A + +G++ +FG G
Sbjct: 287 GLVSQIDCGSD-----HTLAYIYTTGQVVSFGRG 315
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
++Q A+G + L L S V S G G+LG + P I + LN+ +
Sbjct: 25 LLQAASGEHHSLLLL---SDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNV--AL 79
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 424
V+ G H+ V GRV WG G LG G +E +PK ++ L +K I VA G Y
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +SEDG V+S+G L G G + +PQ V SL+ I L
Sbjct: 140 SVALSEDGQVFSWGTNSHGQL-------GLGKEFPSQASPQRVRSLE-------GIPLAQ 185
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
H+FAL+ SG + +G+ GQL + N +R P
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKP 227
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L +G V + + +LG P +P + LE + V ++ G
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G+LG G + P+ I+ L ++ + VA G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAASEGQLGIGEFKETTFIPKKIKT--LAGIKIIQVACGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +DG+V +WG +G LG G E ++ P+ V++L + VA G + +F +S
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ N P + +LK + VV IS
Sbjct: 199 SGT--SFGWG-SNSAGQLALSGN--NAPVQRYKPVSIGALKTLG--VVSISCGYK----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT LT+ GK++ FG GQLG
Sbjct: 247 HTAVLTQDGKVFTFGDNSYGQLG 269
>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
Length = 484
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 188/439 (42%), Gaps = 69/439 (15%)
Query: 99 AALDMCQKRAIFKPMTEAERQDLKQK---CGGS-WKLVLRFLLAGEACCRRENSQAIAGP 154
AA + Q A KP + E + + CGG+ W L+ R L A Q + GP
Sbjct: 43 AAAETSQPAAADKPPLKLEGSKVAGELLICGGTNWDLIGRNQLPKNATGSANRGQNLWGP 102
Query: 155 G--------------------HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL 194
HSI +T G S+G N GQLGHG T+ P I SL
Sbjct: 103 HRYGSMSGVRVRSVISGPTSVHSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTVIESL 162
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
G I++AA G T+ ++D G+V+AFG++ G+ G + + + Q+V + VV
Sbjct: 163 AGFNIVEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNENAAVPSPTQIVYT--GPPVV 220
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHP-------- 296
+ A G F+ V+ G +Y+F +LG++T+ D E P
Sbjct: 221 KVACGAEFSMVIDCRGALYSFGCPEYGQLGNNTDGQYFVTSNKMAYDCELVPRRISVFIE 280
Query: 297 -----LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
+ + N+ +V I G + +AL Q V++ G G G+LGH + DE PR
Sbjct: 281 KTKDGFINPITNVQLVDIKCGTNHTVALDKQKR---VFTWGFGGYGRLGHSEQKDEHVPR 337
Query: 352 LIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
L++ F + AGA+++ ++ G++ WG + E PK VQ L
Sbjct: 338 LVKMFDYPGRGARTIYAGAFYSMGIMDNGGQLYLWGQTKT------TGEANMYPKPVQDL 391
Query: 411 N--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
+ DV+++ + + VV+ D S+ G S + G + N+ + P+ V
Sbjct: 392 SGWDVRSVGCSN---RSIVVAADESTISW--GPSPTYGELGYGE---NKAKSSTIPKEVK 443
Query: 469 SLKQVNERVVQISLTNSIY 487
+L + V ++I+
Sbjct: 444 TLDGIYIHKVSCGYGHTIF 462
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G++ + V + +G + ++ G A+ S G G+LGHG P +I
Sbjct: 102 PH-RYGSMSGVRVRSVISGPTSVHSILITEDGKAM-SWGRNDKGQLGHGDTKRVDVPTVI 159
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-ND 412
E N+ V A G H + DG+V +G + G LG GNE +VP Q +
Sbjct: 160 ESLAGFNI--VEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNENA-AVPSPTQIVYTG 216
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ----GNRHAN--VLTPQL 466
+ VA G + V+ G +YSFGC E LG+N DGQ N+ A L P+
Sbjct: 217 PPVVKVACGAEFSMVIDCRGALYSFGCPEYGQLGNN--TDGQYFVTSNKMAYDCELVPRR 274
Query: 467 VTSLKQVNER-----VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ + + + + L + HT AL + +++ +G G G+LG
Sbjct: 275 ISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLG 326
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 30/130 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYG + S +V ++ ++H + +++EDG S+G +
Sbjct: 100 WGPHRYGSM--------SGVRVRSVISGPTSVH-------SILITEDGKAMSWGRNDKGQ 144
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P ++ SL N +V+ + + HT LT+ GK++AF
Sbjct: 145 LGH-----GDTKR---VDVPTVIESLAGFN--IVEAACGRN-----HTLCLTDDGKVFAF 189
Query: 505 GAGDKGQLGI 514
G GQLG+
Sbjct: 190 GENKMGQLGL 199
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 154 PGHSIAVTSKGVVYSFG-SNSSGQL-----GHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
PG G YS G ++ GQL T E P+P++ L G +++ +
Sbjct: 345 PGRGARTIYAGAFYSMGIMDNGGQLYLWGQTKTTGEANMYPKPVQDLSGWD-VRSVGCSN 403
Query: 208 RTMLISDAGQVYAFGKD-SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
R+++++ ++G ++GE YG K T P+ V++L I++ + + G T +
Sbjct: 404 RSIVVAADESTISWGPSPTYGELGYGENKAKSSTIPKEVKTLDGIYIHKVSCGYGHTIFI 463
Query: 267 SR 268
+R
Sbjct: 464 AR 465
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 32/397 (8%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP--RPIRSLQGIRIIQAA 203
+ ++ AG HS+ + +K ++S+G N G LG GT + RP + L G ++ +
Sbjct: 1429 DKNRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSIS 1488
Query: 204 AGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIG 259
G+G R+ I D G+++A+G + G G + P LV+ SL + V A G
Sbjct: 1489 TGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDR--NRPVLVDLASLGSSKVTAVAAG 1546
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYL 316
+ VL + R++ + D +LG T N P P+ LE + V + AG +
Sbjct: 1547 RYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHS 1606
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+ L ++ G G+LG G+ T + P L++ L + + V+AG H +
Sbjct: 1607 IILDDLGR---LWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVAL 1663
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDV 434
+ G + WG G LG G+ P V +L+ K + ++ G + T + E G +
Sbjct: 1664 DEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRL 1723
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+++G ES LG N+H V L +N R V S Y+ F
Sbjct: 1724 WAWGPNESGLLGDGTTI----NQHRPVQ-----VDLTPLNGRKVVAVSAGSFYF----FV 1770
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+ + G+L+A+G+ GQLG +T R P RVD+
Sbjct: 1771 VDDRGELWAWGSNSYGQLGD---GTKTRRLKPVRVDM 1804
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 195/426 (45%), Gaps = 76/426 (17%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLQ 195
L EA + ++ + IA +I + G++ S+G+NS G LGH G E+ W P I SL
Sbjct: 541 LLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQLW-PLAIESLS 598
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---------- 245
+++ AAG ++ +++ G+V +FG + G+ G TK+ S L
Sbjct: 599 SVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQC--GQPITKIAESSDLAAVARPRPIVL 656
Query: 246 -ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT----------------- 287
+ L+ VV A G + +A+++ +G +YTF G + +LGH T
Sbjct: 657 PDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNS 716
Query: 288 -EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
+ + +P P L L V Q+A G + AC A+Y+ G G G+LGHG T
Sbjct: 717 AQTSYFQPKPTRLSALNGQVVKQVACGRFH---SACVTEEGALYTWGRGANGQLGHGDMT 773
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE------- 398
D+ P+ +E + + V VA G H+A V G + T G G LG G+E
Sbjct: 774 DQATPKRVEA-GIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHG 832
Query: 399 --------EC-ESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
C E +P + L+ V+ + +A G ++ G +Y++G G + LG
Sbjct: 833 EGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGP 892
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ +V P ++S+ + VV ++ + H ALT+ G+LY +G+
Sbjct: 893 S----------GDVSEPTHLSSI----DGVVSVACG-----DIHAAALTDKGQLYMWGSS 933
Query: 508 DKGQLG 513
+ G+LG
Sbjct: 934 EAGRLG 939
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 141/376 (37%), Gaps = 106/376 (28%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--------EEWRP 188
LA E+ + AG HS+ +T G V SFG N GQ G T+ RP
Sbjct: 592 LAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARP 651
Query: 189 RPI---RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------------- 232
RPI L+ ++ AAG + L++ G++Y FG+ GE + G
Sbjct: 652 RPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG--GEFQLGHDTVMALGEGGNA 709
Query: 233 -------VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
Q + P + +L V Q A G F +A ++ EG +YT+ G + +LGH
Sbjct: 710 LHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGH 769
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-------------------------- 319
+ P + +++ +V++A G + A+
Sbjct: 770 GDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICA 829
Query: 320 -----------ACQ---PSGMAVYSV--------GCGLG--------------GK---LG 340
+CQ P+ +++ SV CG G GK LG
Sbjct: 830 THGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALG 889
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--N 397
G D P L ++ VV VA G HAA + G++ WG G LG G
Sbjct: 890 LGPSGDVSEPT-----HLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRST 944
Query: 398 EECESVPKVVQALNDV 413
E PK+V A D+
Sbjct: 945 EGVTRTPKLVPAFADI 960
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
L+ + L N +A ++ + Q G + +WG G LGH + P +++L+
Sbjct: 541 LLSEASLKNKSEEFIAE--YYKNIKEQTGLILSWGANSDGVLGHTGGIEQLWPLAIESLS 598
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
V+ VA G++ + ++E+G+V SFG + G + + A V P+ +
Sbjct: 599 SVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPD 658
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 525
+ ++ V +S+ Y H+ +T G+LY FG G + QLG + V E GN
Sbjct: 659 DLRKKTV-VSIAAGGY---HSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708
>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
Length = 429
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 177/392 (45%), Gaps = 65/392 (16%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
S+A G+V G GQLG G E RP ++ L + IQ A G T+ ++ A
Sbjct: 30 SLASDEAGIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKA 89
Query: 216 GQVY--------AFGKDS--FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G++Y A G+D+ EAEY P LV+ L N+ ++Q + G+ TA
Sbjct: 90 GEIYTWGCNDECALGRDTSDTSEAEY---------LPGLVDGLDNVKIIQVSAGDNHTAA 140
Query: 266 LSREGRVYTFS--WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ +GRV+ + W N +G + P +LG N PV++I +G ++ AL
Sbjct: 141 LADDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGD-PNDPVIKIGSGNNHVAALTA-- 197
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV---------------VA 367
+G+ +++ GCG G+LG R E+ R Q LQP V +
Sbjct: 198 NGL-IFTWGCGEQGQLG---RVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIF 253
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL------NDVKAIHVATG 421
G ++ V G V G YG +G+GN + +L ND + I +A+G
Sbjct: 254 VGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQILIASG 313
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
++ T +++ +G VYS G G+ LG D + H P + +L + + V
Sbjct: 314 EHHTLILARNGRVYSIGRGDYGRLGLG--PDVKECSH-----PTEIETLANSDIKAVTCG 366
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L A +FA++ SG +Y++G G QLG
Sbjct: 367 L-------AVSFAVSNSGDVYSWGMGTNLQLG 391
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 43/353 (12%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 205
Q G H++A+T G +Y++G N LG T+ E E+ P + L ++IIQ +AG
Sbjct: 75 QVACGGVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAG 134
Query: 206 AGRTMLISDAGQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
T ++D G+V+ +G D+ G + G + P ++ N V++ GN
Sbjct: 135 DNHTAALADDGRVFCWGNFWDNRGSIGLNLAGKQ--PRPIVMLGDPNDPVIKIGSGNNHV 192
Query: 264 AVLSREGRVYTFSWGNDARLGHHTE---PNDVEP------HPLLGTL-----ENIPVVQI 309
A L+ G ++T+ G +LG E D P + + ++I I
Sbjct: 193 AALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDI 252
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN----LQPVV 365
G L A+ + V++ G G++G+G+ T + I+ LN + ++
Sbjct: 253 FVGPYNLFAV---NAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQIL 309
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQAL--NDVKAIHVATG 421
+A+G H ++ ++GRV + G G YG LG G + EC S P ++ L +D+KA V G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKEC-SHPTEIETLANSDIKA--VTCG 366
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+F VS GDVYS+G G + LG + D +LTP LV + + N
Sbjct: 367 LAVSFAVSNSGDVYSWGMGTNLQLGSSTDDD--------ILTPTLVKTKESYN 411
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 145/336 (43%), Gaps = 39/336 (11%)
Query: 201 QAAAGAGRTMLISD-AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
Q+ R L SD AG V G+ G+ G + + + P V+ L + +Q A G
Sbjct: 21 QSKRQKARLSLASDEAGIVLVLGQGELGQLGLGEEILER-SRPTAVKKLLEVEFIQVACG 79
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHP-LLGTLENIPVVQIAAGYCYLL 317
T L++ G +YT+ ++ LG T + ++ E P L+ L+N+ ++Q++AG +
Sbjct: 80 GVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTA 139
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
ALA V+ G + G K PR I N + + +G H A +
Sbjct: 140 ALADDGR---VFCWGNFWDNRGSIGLNLAGKQPRPIVMLGDPNDPVIKIGSGNNHVAALT 196
Query: 378 QDGRVCTWGWGRYGCLGHGNEE-CE-------------SVPKVVQ-ALNDVKAIHVATGD 422
+G + TWG G G LG E C +V +V Q + D++ + G
Sbjct: 197 ANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGP 256
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN----ERVV 478
Y F V+ G+V++ G +G+ I ++ + SL +N ER +
Sbjct: 257 YNLFAVNAAGEVFACGLNNYGQIGNGNIT--------SLYYLAKIDSLSALNDGNDERQI 308
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
I+ HT L +G++Y+ G GD G+LG+
Sbjct: 309 LIASGEH-----HTLILARNGRVYSIGRGDYGRLGL 339
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI------RIIQ 201
S GP + AV + G V++ G N+ GQ+G+G + I SL + R I
Sbjct: 250 SDIFVGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSALNDGNDERQIL 309
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
A+G T++++ G+VY+ G+ +G G K + P +E+L N + G
Sbjct: 310 IASGEHHTLILARNGRVYSIGRGDYGRLGLGPD-VKECSHPTEIETLANSDIKAVTCGLA 368
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+ +S G VY++ G + +LG T+ + + P L+ T E+ +AG
Sbjct: 369 VSFAVSNSGDVYSWGMGTNLQLGSSTDDDILTP-TLVKTKESYNFFAASAG 418
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 380 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V G G G LG G E E S P V+ L +V+ I VA G T +++ G++Y++G
Sbjct: 37 GIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWG 96
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
C + +LG D A L P LV L V +++Q+S ++ HT AL +
Sbjct: 97 CNDECALGR----DTSDTSEAEYL-PGLVDGLDNV--KIIQVSAGDN-----HTAALADD 144
Query: 499 GKLYAFGA--GDKGQLGIELVNNQ 520
G+++ +G ++G +G+ L Q
Sbjct: 145 GRVFCWGNFWDNRGSIGLNLAGKQ 168
>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1103
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL+G+ + + G T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 37/341 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329
Query: 248 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 304
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V ++ G + + S +++ G G G LGHG + ++PR +E L L+ +
Sbjct: 390 HVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLRTI 444
Query: 365 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N DG+ P LV K
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KL 554
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS Y H ALT ++Y +G G G+LG
Sbjct: 555 ASEFVEEISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 33/289 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 328
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 356
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG- 384
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L L V+ G WH A++ GR+ T+G G +G LGHG++E P+ V++L+ ++ I
Sbjct: 385 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 444
Query: 417 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V+ G + T V E G ++++G G+ LGH G++ L P
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-LKP 496
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +L N +I+ +S+ T LT SG+++ G+ GQLG
Sbjct: 497 TCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E PR + SL G+R I + G T +
Sbjct: 397 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 456
Query: 213 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 457 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 514
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G+V+T +LG + + + P + L + V +I+ G ++ AL
Sbjct: 515 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D K P ++E + +++ + AA H V
Sbjct: 574 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 630
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECES 402
G + C+ + R+ C G C S
Sbjct: 631 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 664
>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
Length = 1103
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL+G+ + + G T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 37/341 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329
Query: 248 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 304
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V ++ G + + S +++ G G G LGHG + ++PR +E L L+ +
Sbjct: 390 HVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLRTI 444
Query: 365 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N DG+ P LV K
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KL 554
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS Y H ALT ++Y +G G G+LG
Sbjct: 555 ASEFVEEISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 33/289 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 328
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 356
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG- 384
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L L V+ G WH A++ GR+ T+G G +G LGHG++E P+ V++L+ ++ I
Sbjct: 385 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 444
Query: 417 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V+ G + T V E G ++++G G+ LGH G++ L P
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-LKP 496
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +L N +I+ +S+ T LT SG+++ G+ GQLG
Sbjct: 497 TCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E PR + SL G+R I + G T +
Sbjct: 397 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 456
Query: 213 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 457 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 514
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G+V+T +LG + + + P + L + V +I+ G ++ AL
Sbjct: 515 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D K P ++E + +++ + AA H V
Sbjct: 574 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 630
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECES 402
G + C+ + R+ C G C S
Sbjct: 631 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 664
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 42/369 (11%)
Query: 134 RFLLAGEACCRRE---NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
++L+ E E N +++A G H++AVT G +Y+ GSN GQLGH + +
Sbjct: 20 NYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKI 79
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLV 245
P ++ + + A G +M +++ GQ+Y +G DS G E + G+Q P++V
Sbjct: 80 P--GVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQ-----YKPKIV 132
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 303
++L ++ +VQ + G L+ G +YT WG++ +LG P +V L+ +L
Sbjct: 133 KTLASMLLVQISCGYKHCMALTNHGELYT--WGSNEFGQLGLGLGPGNVSKPTLVNSLVG 190
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+P+ IA G + + SG AV+ G G+LG S+T P ++ + + ++
Sbjct: 191 LPISFIACGGYH--SFVVSKSG-AVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVK- 246
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 422
+A G + + DG V T G G YG LGHG+ E VP+ V L V G
Sbjct: 247 -YIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 305
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV---------TSLKQV 473
+T +V G VYSFG G LG + N TPQLV TS+ +
Sbjct: 306 HTLTLVPSKGRVYSFGLGSVGQLGTKS--------SINSNTPQLVLGPWLSPSGTSMIET 357
Query: 474 NERVVQISL 482
N++ V S+
Sbjct: 358 NKQYVVKSI 366
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 33/355 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFG 222
+Y +G+ +G+LG G EE + P I + + + I++ A G T+ +++ GQ+YA G
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 281
+ FG+ + TKL Q + ++++ + A G + L+ G++YT WG+D+
Sbjct: 61 SNDFGQLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSC 114
Query: 282 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKL 339
+LG T+ ++ TL ++ +VQI+ GY + +AL +Y+ G G
Sbjct: 115 GQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLG 171
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
+ P L+ L+ L +A G +H+ VV + G V WG +G LG ++
Sbjct: 172 LGLGPGNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQT 229
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
S P ++ + VK ++A G+ + ++ DG V++ G G LGH + +
Sbjct: 230 SLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF--------S 281
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
N + P+ V L+ + V Q++ HT L S G++Y+FG G GQLG
Sbjct: 282 NEIVPRKV--LELMGSTVTQVTCGRR-----HTLTLVPSKGRVYSFGLGSVGQLG 329
>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 529
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 214
HSIA+T+KG ++G+ +LGHG++ +E+ PR I L+ R+ A G G T+ + +
Sbjct: 217 HSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALME 276
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
+G+++A+G S G G + + S + ++IF G + LS +GR Y
Sbjct: 277 SGELFAWGNGSNGRLGLGDTNDRPESCSTSVPVRFRHIFC-----GASHSLGLSWDGRAY 331
Query: 274 TFSWGNDARLGH-HTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
T+ N + GH HT ++ E V AAG + L SG VYS
Sbjct: 332 TWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGG-WEHTLFSTASGR-VYSC 389
Query: 332 GCGLGGK--------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
GCG LGHG P LI+ + + V VA G H+ V G+V
Sbjct: 390 GCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVY 449
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG G G LGHG+EE P +V+ + G T ++ D +++S G G+S
Sbjct: 450 TWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAGCEHTVFLTYDHELWSCGQGDSG 509
Query: 444 SLGH 447
LGH
Sbjct: 510 RLGH 513
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 24/269 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G GH++A+ G ++++G+ S+G+LG G T + RP + +R GA ++ +
Sbjct: 267 GLGHTLALMESGELFAWGNGSNGRLGLGDTND--RPESCSTSVPVRFRHIFCGASHSLGL 324
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 268
S G+ Y +GK++ G+ +G + Q +ES ++ V AA G T +
Sbjct: 325 SWDGRAYTWGKNNQGQCGHGHTNDQWTI--QEIESFEDGEEAECVTYAAGGWEHTLFSTA 382
Query: 269 EGRVYTFSWG-NDAR-------LGHHTEPNDVEPHPLLGTLENI--PVVQIAAGYCYLLA 318
GRVY+ G D+R LGH ++P L+ +LE+ +V++A G+ + +
Sbjct: 383 SGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKP-TLIQSLEDAREEIVKVACGWDH--S 439
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
LA SG VY+ G G GKLGHG P L+ + +++ AG H +
Sbjct: 440 LAVSASG-KVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKD--AKAGCEHTVFLTY 496
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVV 407
D + + G G G LGHG+ + P +
Sbjct: 497 DHELWSCGQGDSGRLGHGDSQTRKRPTKI 525
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 198/483 (40%), Gaps = 73/483 (15%)
Query: 77 TCSFFRQPANFAPDYQLSI---SELAALDMCQKRAIFKP-MTEAERQDLKQKCGGSWKLV 132
TC R P A + +LS+ ++L +L + P +T+ +L+ + G W +
Sbjct: 5 TCQSLRDPLKLAVNSRLSVQIAAKLPSLLTSMPTCVLSPGLTDEVPVELEDE-GNVWSVF 63
Query: 133 LRF------LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 186
+ LL ++ C E ++ + V V Y S G+LG+ +
Sbjct: 64 YQLFQLFEELLGIKSDCMGEEKVCLSASDRATVV----VAYVALSLKWGRLGYLLKGIKL 119
Query: 187 RPRPIRSLQGIRI----------IQAAAGAGRTMLISD---AGQVYAFGKDSFGEAEYG- 232
L G+R+ +A+ +T + + G + +FGK G+ +G
Sbjct: 120 LLENDAELGGVRLEPLQPLFRELAEASVERAQTTIGEEDQPCGYLMSFGKGDHGKLGHGQ 179
Query: 233 ----------VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
KLV P ++ + ++I + + + ++ +G + G+ R
Sbjct: 180 CVHVSCQEGNCTENKLV--PTMIAATRDILFRRIDSLSTHSIAITAKGDAMAWGNGDKYR 237
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH + + P + V +A G + LAL SG +++ G G G+LG G
Sbjct: 238 LGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLAL--MESG-ELFAWGNGSNGRLGLG 294
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
D P + + + GA H+ + DGR TWG G GHG+ +
Sbjct: 295 DTNDR--PESCSTSVPVRFRHIF--CGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQW 350
Query: 403 VPKVVQALND---VKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS--------LGHNAI 450
+ +++ D + + A G + T + G VYS GCG S LGH
Sbjct: 351 TIQEIESFEDGEEAECVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGH--- 407
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G +R L P L+ SL+ E +V+++ W+ H+ A++ SGK+Y +G+G G
Sbjct: 408 --GDCDRR---LKPTLIQSLEDAREEIVKVACG----WD-HSLAVSASGKVYTWGSGTNG 457
Query: 511 QLG 513
+LG
Sbjct: 458 KLG 460
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 158/376 (42%), Gaps = 51/376 (13%)
Query: 164 GVVYSFGSNSSGQLGHG-----------TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G + SFG G+LGHG TE + P I + + I + + + ++ I
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLSTHSIAI 221
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGR 271
+ G A+G +G TK T P+++E L+ V A G T L G
Sbjct: 222 TAKGDAMAWGNGDKYRLGHG-SSTKEYT-PRMIEHLRLKGRVRDLACGLGHTLALMESGE 279
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV--QIAAGYCYLLALACQPSGMAVY 329
++ + G++ RLG D P + ++PV I G + L L+ Y
Sbjct: 280 LFAWGNGSNGRLG----LGDTNDRPESCST-SVPVRFRHIFCGASHSLGLSWDGR---AY 331
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 387
+ G G+ GHG D+ + IE F+ + V AAG W H GRV + G
Sbjct: 332 TWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEHTLFSTASGRVYSCGC 391
Query: 388 G-----RYG---CLGHGNEECESVPKVVQALNDVKA--IHVATGDYTTFVVSEDGDVYSF 437
G R G LGHG+ + P ++Q+L D + + VA G + VS G VY++
Sbjct: 392 GYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVYTW 451
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G + LGH + TP LV +++ + + + HT LT
Sbjct: 452 GSGTNGKLGHGD--------EESFDTPTLVRTMEGRHVKDAKAGC-------EHTVFLTY 496
Query: 498 SGKLYAFGAGDKGQLG 513
+L++ G GD G+LG
Sbjct: 497 DHELWSCGQGDSGRLG 512
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR----IIQAAAGA 206
G HS+ ++ G Y++G N+ GQ GHG T ++W + I S + + AA G
Sbjct: 315 FCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGW 374
Query: 207 GRTMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF--VVQAAI 258
T+ + +G+VY+ G KDS V G P L++SL++ +V+ A
Sbjct: 375 EHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVAC 434
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + +S G+VYT+ G + +LGH E + P L+ T+E V AG + +
Sbjct: 435 GWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTP-TLVRTMEGRHVKDAKAGCEHTVF 493
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L ++S G G G+LGHG K P I F
Sbjct: 494 LTYDHE---LWSCGQGDSGRLGHGDSQTRKRPTKIGLF 528
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
R E + G HS+AV++ G VY++GS ++G+LGHG E P +R+++G + A
Sbjct: 426 REEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAK 485
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
AG T+ ++ ++++ G+ G +G T+
Sbjct: 486 AGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTR 519
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
Query: 380 GRVCTWGWGRYGCLGHGN-----------EECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G + ++G G +G LGHG E + VP ++ A D+ + + + +
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLSTHSIAI 221
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ GD ++G G+ LGH + TP+++ L+ + RV ++
Sbjct: 222 TAKGDAMAWGNGDKYRLGHGS--------STKEYTPRMIEHLR-LKGRVRDLACGL---- 268
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
HT AL ESG+L+A+G G G+LG+ N++ E
Sbjct: 269 -GHTLALMESGELFAWGNGSNGRLGLGDTNDRPE 301
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAG----------- 369
QP G + S G G GKLGHG H E N L P ++AA
Sbjct: 159 QPCGY-LMSFGKGDHGKLGHGQCV---HVSCQEGNCTENKLVPTMIAATRDILFRRIDSL 214
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVV 428
+ H+ + G WG G LGHG+ E P++++ L + +A G T +
Sbjct: 215 STHSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLAL 274
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
E G+++++G G + LG D P+ ++ V + +
Sbjct: 275 MESGELFAWGNGSNGRLGLGDTND----------RPESCST-------SVPVRFRHIFCG 317
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+H+ L+ G+ Y +G ++GQ G N+Q
Sbjct: 318 ASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQ 349
>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
Length = 1042
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 178/396 (44%), Gaps = 42/396 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ GP + + S V+ +GS LG + PR + S + + + A G
Sbjct: 216 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 274
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+I+ G+VY +G S G + V + P++VESL ++ V A G+ T ++
Sbjct: 275 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 332
Query: 269 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G + F WG A LG + N PH LG ++NI V +IA G + + S
Sbjct: 333 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 387
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------ 378
+++ G G G LGHG P+ +E + ++ V A G WH A + +
Sbjct: 388 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 445
Query: 379 ----DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G++ TWG G LGH + + + +P V +L I V+ G T V++ G V
Sbjct: 446 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 505
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
++ G LG N ADG+ +V P LK E V +IS +S H
Sbjct: 506 FTIGSSRHGQLG-NPKADGESI--CSVEGP-----LK--TEFVREISSGSS-----HVAV 550
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
LT SGK++ +G G +GQLG+ + + R +P V+
Sbjct: 551 LTMSGKVFTWGKGAEGQLGL---GDYSNRSSPTLVE 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q+IA G H+ +T +G VY++GS SSG+L P+ + SL + + A G+
Sbjct: 266 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 325
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
T I+ +G+++ +G+ G G+ G + + + NI V + A G + T
Sbjct: 326 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 382
Query: 264 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
A+++ G+++T+ G LGH P +VE +L+ V +A G + A
Sbjct: 383 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 436
Query: 319 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
+ PSG +++ G GKLGH R + P ++ +L + V+ G
Sbjct: 437 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 493
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
V+ G V T G R+G LG+ + ES+ V L +++G V++
Sbjct: 494 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 553
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G V+++G G LG + D ++N +P LV +L+
Sbjct: 554 SGKVFTWGKGAEGQLG---LGD-----YSNRSSPTLVEALE 586
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G H+ +TS G ++++G + G LGHG T+ RP+ + SL+G R+ A G
Sbjct: 373 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 432
Query: 208 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
T I + +G+++ +G G+ + + KL+ P V+SL ++Q +
Sbjct: 433 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 490
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G T VL+ G V+T +LG + + + + G L+ V +I++G ++
Sbjct: 491 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 549
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 372
L SG V++ G G G+LG G ++ P L+E + +++ VV AA H
Sbjct: 550 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 606
Query: 373 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 402
+ +D VC+ +G+ R + C G+ C S
Sbjct: 607 KTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSS 643
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 171/364 (46%), Gaps = 50/364 (13%)
Query: 166 VYSFGSNSSGQLGHGTTEEE---------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+Y +G+ S GQLG G E+E W+P + Q A G T+ ++ +G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSA-------VNQVACGHRHTLFLTASG 55
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
+VYA G + +Y G +L T P + L++ + Q A G+ + L+ G+V
Sbjct: 56 KVYACGSN-----DYSQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQV--L 108
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG++ +LGH ++ + ++ ++ L + VVQIA G + LAL C +YS G
Sbjct: 109 SWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGE---LYSWGS 165
Query: 334 GLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
+ G+LG S ++ + LL + +A G H ++ + V +GWGR C
Sbjct: 166 NIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAV--FGWGRNNC 223
Query: 393 --LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG +E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 224 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF- 282
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 509
+N + P++V L + + Q++ N HT AL S G++Y FG G
Sbjct: 283 -------SSNEMLPRMVMEL--MGSTISQVACGNR-----HTLALVPSRGRIYGFGLGSS 328
Query: 510 GQLG 513
GQLG
Sbjct: 329 GQLG 332
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 154/307 (50%), Gaps = 21/307 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H++ +T+ G VY+ GSN QLGH + RP I L+ I Q A G+
Sbjct: 39 NQVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTK--RPLQIPELEDYVITQIACGSR 96
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M +++ GQV ++G + G+ + ++ P++V L + VVQ A GN + L+
Sbjct: 97 HSMALTEWGQVLSWGDNECGQLGHA-SDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT 155
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEP--HPL-LGTLENIPVVQIAAG--YCYLLALA 320
G +Y SWG++ +LG + P+++ +P+ L TL IP IA G + +L++
Sbjct: 156 CCGELY--SWGSNIYGQLGVKS-PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLIS-- 210
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 211 ---KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEG 265
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGC 439
V T G G YG LGHG E +P++V L VA G+ +T +V G +Y FG
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325
Query: 440 GESASLG 446
G S LG
Sbjct: 326 GSSGQLG 332
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 13/265 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 206
+Q G HS+A+T G V S+G N GQLGH + ++ + P+ +R L ++Q A G
Sbjct: 89 TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGN 148
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFT 263
++ ++ G++Y++G + +G+ GV+ ++ P + +L I A G T
Sbjct: 149 NHSLALTCCGELYSWGSNIYGQL--GVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHT 206
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
++S+ V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG 265
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 382
V++ G G G+LGHG ++E PR++ +L+ VA G H A+V GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTISQVACGNRHTLALVPSRGRI 320
Query: 383 CTWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG N + ++P+VV
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQVV 345
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV---------VVAAGAWHAAVV 376
M +Y G G+LG G DE Q+L + VA G H +
Sbjct: 1 MELYCWGNASHGQLGLGGIEDE---------QILTPSQIPWKPDSAVNQVACGHRHTLFL 51
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G+V G Y LGH E P + L D +A G + ++E G V S
Sbjct: 52 TASGKVYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLS 109
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G E LGH + D + P++V L V++ VVQI+ N+ H+ ALT
Sbjct: 110 WGDNECGQLGHASDQDV-------IQLPKIVRYL--VSKTVVQIACGNN-----HSLALT 155
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G+LY++G+ GQLG++ + ++ P R+
Sbjct: 156 CCGELYSWGSNIYGQLGVKSPSELSQCNYPMRL 188
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G H+ ++ V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 198 AIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 257
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTISQVACGNRHTLALVP 315
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y F G+ +LG + P ++G
Sbjct: 316 SRGRIYGFGLGSSGQLGTRNTKSLNLPQVVIG 347
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 165/360 (45%), Gaps = 34/360 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C F AG
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC--------VFGSAGN----------- 56
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTM 210
+ T ++ G+N G LG G + PR + SL G +I + G+G +
Sbjct: 57 ----EVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIV 112
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
L + G+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +G
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYV 228
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG Y
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSY 286
Query: 391 GCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
G LG GN+ +S P V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 287 GQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LG+G+ P I L N Q + VA G++H+ V+ DG V WG+ G +G G+
Sbjct: 130 QLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS 188
Query: 398 EECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ +P +V L + + +A G V + G+VY +G + LG +
Sbjct: 189 TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS------- 241
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
N TP V +L+ + + V AHT LT+ G++YA+GA GQLG
Sbjct: 242 -SGNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGANSYGQLGTGN 293
Query: 517 VNNQT 521
+NQ+
Sbjct: 294 KSNQS 298
>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
motifs [Arabidopsis thaliana]
Length = 1108
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 24/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL+G+ + + G T
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 464
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 523
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 524 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 578
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 579 SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 629
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 157/341 (46%), Gaps = 37/341 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 277 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 334
Query: 248 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 304
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 335 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 394
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V ++ G + + S +++ G G G LGHG + ++PR +E L L+ +
Sbjct: 395 HVASVSCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVE--SLSGLRTI 449
Query: 365 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 450 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 509
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N DG+ P LV K
Sbjct: 510 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KL 559
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS H ALT ++Y +G G G+LG
Sbjct: 560 ASEFVEEISCG-----AYHVAALTSRNEVYTWGKGANGRLG 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 33/289 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 274 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 333
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 356
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 334 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG- 389
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L L V+ G WH A++ GR+ T+G G +G LGHG++E P+ V++L+ ++ I
Sbjct: 390 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTI 449
Query: 417 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V+ G + T V E G ++++G G+ LGH G++ L P
Sbjct: 450 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-LKP 501
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +L N +I+ +S+ T LT SG+++ G+ GQLG
Sbjct: 502 TCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 543
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ +TS G +++FG + G LGHG E PR + SL G+R I + G T +
Sbjct: 402 GPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV 461
Query: 213 SD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 462 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRL--KPTCVPALIDYNFHKIACGH 519
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ G+V+T +LG + + + P + L + V +I+ G ++ AL
Sbjct: 520 SLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 578
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAV 375
S VY+ G G G+LGHG D K P ++E + +++ + AA H V
Sbjct: 579 ---SRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWV 635
Query: 376 VGQDGRVCT-------WGWGRYGCLGHGNEECES 402
G + C+ + R+ C G C S
Sbjct: 636 SGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHS 669
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 115/210 (54%), Gaps = 12/210 (5%)
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEP-NDVEPHPL 297
+P+ +E+L I V Q A G+ T VLS++G+VYT WG ++R LG E + +
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYT--WGQNSRGQLGLGKEGCSSISSPQC 169
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +L ++PVVQ++AG + AL+ S V+ G G+LG G TD + P L+
Sbjct: 170 VRSLSSMPVVQVSAGGDHSFALSVSGS---VFGWGRNDCGQLGLGDTTDRETPTLV---H 223
Query: 358 LLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LN++ V AA G H AV+ DG V T+G G YG LGH + P++V L K
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVT 283
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+A G Y T V+++ VYSFGC E LG
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWRPRPIRSLQGIRIIQAAAG 205
+Q G H++ ++ G VY++G NS GQLG G P+ +RSL + ++Q +AG
Sbjct: 125 TQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAG 184
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ +S +G V+ +G++ G + G+ T +P LV L V AA G TAV
Sbjct: 185 GDHSFALSVSGSVFGWGRNDCG--QLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAV 242
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L+ +G V+TF G+ +LGH++ N + P L+ L V +IA G + L L
Sbjct: 243 LTMDGTVFTFGSGHYGQLGHNSFRNALCPR-LVAELWGAKVTKIACGRYHTLVLT---DH 298
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
M VYS GC G+LG +E HP + QL P++
Sbjct: 299 MKVYSFGCNEHGQLGP---REETHPCVPLPVQLPREGPII 335
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + +L GI + Q A G+ T+++S GQVY +G++S G+ G +G ++SPQ V S
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRS 172
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPV 306
L ++ VVQ + G + LS G V F WG ND + D E L+ L
Sbjct: 173 LSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKT 230
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V A G + L + V++ G G G+LGH S + PRL+ +L + +
Sbjct: 231 VFAACGKDHTAVLTMDGT---VFTFGSGHYGQLGHNSFRNALCPRLVA--ELWGAKVTKI 285
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
A G +H V+ +V ++G +G LG E VP VQ
Sbjct: 286 ACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQ 327
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 294 PHP-----LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TD 346
PHP L L I V Q+A G + + L+ VY+ G G+LG G +
Sbjct: 107 PHPPFTPRSLEALSGITVTQVACGSQHTVVLS---KDGQVYTWGQNSRGQLGLGKEGCSS 163
Query: 347 EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESV 403
P+ + L+ PVV V+AG H+ + G V +GWGR C LG G+
Sbjct: 164 ISSPQCVRS---LSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRET 218
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P +V LN K + A G T V++ DG V++FG G LGHN+ N L
Sbjct: 219 PTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSF--------RNALC 270
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P+LV L +V +I+ HT LT+ K+Y+FG + GQLG
Sbjct: 271 PRLVAEL--WGAKVTKIACG-----RYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 137 LAGEACCRRENS----QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
++ C R +S Q AG HS A++ G V+ +G N GQLG G T + P +
Sbjct: 164 ISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVH 223
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
L + + AA G T +++ G V+ FG +G + G + P+LV L
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYG--QLGHNSFRNALCPRLVAELWGAK 281
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAA 311
V + A G + T VL+ +VY+F +LG E + P P+ E P++Q I A
Sbjct: 282 VTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREG-PIIQNIFA 340
Query: 312 G 312
G
Sbjct: 341 G 341
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P+ ++AL+ + VA G T V+S+DG VY++G LG +G +++ +
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK----EGC--SSISS 166
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 523
PQ V SL + VVQ+S H+FAL+ SG ++ +G D GQLG+ + T+R
Sbjct: 167 PQCVRSLSSMP--VVQVSAGGD-----HSFALSVSGSVFGWGRNDCGQLGL---GDTTDR 216
Query: 524 GNPERV 529
P V
Sbjct: 217 ETPTLV 222
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 168/361 (46%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++ L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATVPSLKMLDV-GKWPIFSLCSEEELQVIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N SG LG G + PR + SL +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+++G +++G+ G LV S + +L N V + A G++ + VL+ +
Sbjct: 112 VLATTEGEVFSWGHNAYGQLGNGTINHGLVPS-HISTNLSNKQVTEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ +S P VV + + I +T+ ++ G VY +G C G+S +L
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVTLP 345
Query: 447 H 447
H
Sbjct: 346 H 346
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G+LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 120 VFSWGHNAYGQLGNGTINHGLVPSHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ +++P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNA 449
GCLG G+ + P+ + +L+D K ++ G V+ + +G+V+S+G LG+
Sbjct: 76 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGT 135
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
I G L P + S N++V +++ + H+ LT G+++A+G +
Sbjct: 136 INHG--------LVPSHI-STNLSNKQVTEVACG-----SYHSLVLTSDGEVFAWGYNNS 181
Query: 510 GQLGIELVNNQTERGNPERV 529
GQ+G NQ P RV
Sbjct: 182 GQVGSGSTANQ---AIPRRV 198
>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
Length = 1041
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 178/396 (44%), Gaps = 42/396 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ GP + + S V+ +GS LG + PR + S + + + A G
Sbjct: 215 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 273
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+I+ G+VY +G S G + V + P++VESL ++ V A G+ T ++
Sbjct: 274 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 331
Query: 269 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G + F WG A LG + N PH LG ++NI V +IA G + + S
Sbjct: 332 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 386
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------ 378
+++ G G G LGHG P+ +E + ++ V A G WH A + +
Sbjct: 387 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 444
Query: 379 ----DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G++ TWG G LGH + + + +P V +L I V+ G T V++ G V
Sbjct: 445 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
++ G LG N ADG+ +V P LK E V +IS +S H
Sbjct: 505 FTIGSSRHGQLG-NPKADGES--ICSVEGP-----LK--TEFVREISSGSS-----HVAV 549
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
LT SGK++ +G G +GQLG+ + + R +P V+
Sbjct: 550 LTMSGKVFTWGKGAEGQLGL---GDYSNRSSPTLVE 582
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q+IA G H+ +T +G VY++GS SSG+L P+ + SL + + A G+
Sbjct: 265 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 324
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
T I+ +G+++ +G+ G G+ G + + + NI V + A G + T
Sbjct: 325 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 381
Query: 264 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
A+++ G+++T+ G LGH P +VE +L+ V +A G + A
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 435
Query: 319 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
+ PSG +++ G GKLGH R + P ++ +L + V+ G
Sbjct: 436 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 492
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
V+ G V T G R+G LG+ + ES+ V L +++G V++
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 552
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G V+++G G LG + D ++N +P LV +L+
Sbjct: 553 SGKVFTWGKGAEGQLG---LGD-----YSNRSSPTLVEALE 585
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G H+ +TS G ++++G + G LGHG T+ RP+ + SL+G R+ A G
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431
Query: 208 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
T I + +G+++ +G G+ + + KL+ P V+SL ++Q +
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 489
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G T VL+ G V+T +LG + + + + G L+ V +I++G ++
Sbjct: 490 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 548
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 372
L SG V++ G G G+LG G ++ P L+E + +++ VV AA H
Sbjct: 549 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 605
Query: 373 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 402
+ +D VC+ +G+ R + C G+ C S
Sbjct: 606 KTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 38/384 (9%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI----RIIQAAAGAGRTMLI 212
S+AV S G Y++G N+ GQLG TT P +R G+ +Q +AG ++ +
Sbjct: 572 SLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLAL 631
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLV-----TSPQLVESLKNIFVVQAAIGNFFTAVLS 267
G VYA+G + G+ + V + K + +Q + G+ + L
Sbjct: 632 GSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALD 691
Query: 268 REGRVYTFSWGNDARLGHHTEPNDV------EPHPLLGTLENIPVVQIAAGYCYLLALAC 321
G VY + W ++ RLG+++ + +P + + VQ++AG+ + LA+
Sbjct: 692 SNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVG- 750
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-----LQPVVVAAGAWHAAVV 376
S Y+ G G+LG+ S+ P + F N L+ V V+AG H+ V
Sbjct: 751 --SDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAV 808
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-------ALNDVKAIHVATGDYTTFVVS 429
G DG WG YG LG+ N +VP V+ A +KA + G + V
Sbjct: 809 GSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVG 868
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+G Y++G LG +N P V + + T +
Sbjct: 869 NNGYAYAWGWNLYRQLGDGTT--------SNSSVPVPVRDPTSPADASKGLQATRFSVGD 920
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
H+ A+ +G YA+G GQLG
Sbjct: 921 HHSLAVGSNGYAYAWGENSYGQLG 944
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 146/346 (42%), Gaps = 57/346 (16%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-------RPIRSLQGIRIIQ 201
Q AG HS+A+ S G VY++GSN GQLG+ T P P +G++ IQ
Sbjct: 620 QVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQ 679
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLKNIFVV 254
+AG ++ + G VYA+G + G G T + P V + K + V
Sbjct: 680 VSAGDEHSLALDSNGYVYAWGWNDNG--RLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737
Query: 255 QAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTE--------------PNDVEPHPLL 298
Q + G + + +G YT++WG N +LG+ ++ PND
Sbjct: 738 QVSAGWHHSLAVGSDG--YTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDAN----- 790
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE---- 354
+ + VQ++AGY + LA+ S Y+ G G+LG+ + D P +
Sbjct: 791 ---KGLKAVQVSAGYSHSLAVG---SDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTS 844
Query: 355 -QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ----- 408
+ L+ + AG H+ VG +G WGW Y LG G SVP V+
Sbjct: 845 PKDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP 904
Query: 409 --ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
A ++A + GD+ + V +G Y++G LG D
Sbjct: 905 ADASKGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDD 950
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 18/218 (8%)
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL--NLQPVVVAAGA 370
Y Y+ +LA G A Y+ G G+LG + P ++ + + + V V+AG
Sbjct: 567 YTYVFSLAVGSDGKA-YAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGK 625
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-------VKAIHVATGDY 423
WH+ +G DG V WG ++G LG+ + SVP V+ + +KAI V+ GD
Sbjct: 626 WHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDE 685
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ + +G VY++G ++ LG+N+ D + V P T + + VQ+S
Sbjct: 686 HSLALDSNGYVYAWGWNDNGRLGNNSTTD--SSVPVRVRDPASPTDPSK-GLKAVQVSAG 742
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
W+ H+ A+ G YA+G + GQLG N+ +
Sbjct: 743 ----WH-HSLAVGSDGYTYAWGLNNYGQLGNSSKNSSS 775
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 34/286 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-------RPIRSLQGIRIIQ 201
Q AG HS+A+ S G VY++G N +G+LG+ +T + P P +G++ +Q
Sbjct: 679 QVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQ 738
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-------KLVTSPQLVESLKNIFVV 254
+AG ++ + G YA+G +++G+ + + + SP ++ K + V
Sbjct: 739 VSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPN--DANKGLKAV 796
Query: 255 QAAIGNFFTAVLSREGRVYTFSWG--NDARLGHH-----TEPNDV-EPHPLLGTLENIPV 306
Q + G + + +G YT++WG N +LG+ T P V +P + +
Sbjct: 797 QVSAGYSHSLAVGSDG--YTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKA 854
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-----FQLLNL 361
I AG + LA+ +G A Y+ G L +LG G+ ++ P + L
Sbjct: 855 TAINAGGEHSLAVGN--NGYA-YAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGL 911
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
Q + G H+ VG +G WG YG LG G + +VP V
Sbjct: 912 QATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 29/240 (12%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-------QGIRIIQ 201
Q AG HS+AV S G Y++G N+ GQLG+ + P +R +G++ +Q
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-------ESLKNIFVV 254
+AG ++ + G YA+G +++G+ G T T P V ++ K +
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQ--LGNSNTVDSTVPVRVRDPTSPKDASKGLKAT 855
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL------ENIPVVQ 308
G + + G Y + W +LG T N P P+ + + +
Sbjct: 856 AINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATR 915
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+ G + LA+ +G A Y+ G G+LG G+ D P + L NLQPV+ AA
Sbjct: 916 FSVGDHHSLAVGS--NGYA-YAWGENSYGQLGDGTTDDSNVPVSV----LFNLQPVITAA 968
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 59/376 (15%)
Query: 142 CCRRENSQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLG------HGTTEEEWRPRPIR 192
C ++ Q IA G H++ +T +G VY+ G N GQLG H E P
Sbjct: 36 CKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDE 95
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
+ + AAG + IS+ G+VY +G+++ G+ G +G V + Q VESLK+
Sbjct: 96 A----KFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFR 151
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGH------------HTEPNDVEPHPLL 298
+ A+G + LS EG V SWG + RLGH + ++ P +
Sbjct: 152 IQALALGAEHSLALSEEGEV--LSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVK 209
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G ++ V ++AAG L AC ++++ G G +LG G D P+ +
Sbjct: 210 G-FRDVKVSKVAAG---LTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRV----- 260
Query: 359 LNLQPVV-----VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQ-AL 410
PV+ +A G +H + ++G++ WG YGCLG G ++ S+P +V+ AL
Sbjct: 261 ----PVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGAL 316
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES-ASLGHNAIADGQ----GNRHANVLTPQ 465
++ V G T ++ DGDV+++G G S + G + ++ G GN + + L P
Sbjct: 317 ESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNEN-DFLEP- 374
Query: 466 LVTSLKQVNERVVQIS 481
T +K N + +QIS
Sbjct: 375 --TQVKSKNMKAIQIS 388
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 178/375 (47%), Gaps = 43/375 (11%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
+G+ G+LG + E W P +S+Q ++ I A G T+++++ G+VYA G + +G+
Sbjct: 14 WGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQ 73
Query: 229 AEYGVQGTKLVTSPQL----VESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
G L T + VE L + A G+F +A +S +GRVY + +L
Sbjct: 74 L-----GLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQL 128
Query: 284 GHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
G V + +L++ + +A G + LAL+ + V S G L G+LGHG
Sbjct: 129 GLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGE---VLSWGTSLNGRLGHG 185
Query: 343 S------------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
++ E PRL++ F+ +++ VAAG H+A + + G + T+G GR
Sbjct: 186 EGHRSSSMFSIFRKSSEYTPRLVKGFR--DVKVSKVAAGLTHSACLDEQGSLFTFGKGRE 243
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG G + S PK V + V+ I A G Y T +S +G +Y +G E LG
Sbjct: 244 CQLGLGGDRDISEPKRVPVIPPVEEI--ACGGYHTGAISRNGQLYMWGSNEYGCLGF--- 298
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG-AGDK 509
G +H N + ++ + RV Q+ W HT ALT G ++A+G G +
Sbjct: 299 ----GYKHQNATSLPMLVEGALESLRVTQVQCG----WK-HTMALTVDGDVFAWGWGGSQ 349
Query: 510 GQLGIELVNNQTERG 524
G G++ +++ + G
Sbjct: 350 GTHGVDGLSSGGQLG 364
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G YG LG + E P V +++ ++ I +A G T V++E+G VY+ G +
Sbjct: 11 VALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLND 70
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LG L+ +V + T+ + H+ A++E G++
Sbjct: 71 WGQLGLP-------------LSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRV 117
Query: 502 YAFGAGDKGQLGI 514
Y +G +GQLG+
Sbjct: 118 YMWGRNTQGQLGL 130
>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
Length = 1065
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 178/396 (44%), Gaps = 42/396 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ GP + + S V+ +GS LG + PR + S + + + A G
Sbjct: 215 KTFEGPRVACRLDSLKDVFLWGSVLGSMLGSEDIPKSL-PRLVGSAKMLDVQSIACGENH 273
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+I+ G+VY +G S G + V + P++VESL ++ V A G+ T ++
Sbjct: 274 AAIITKQGEVYTWGSYSSGRLDQKVNVN--ASCPKMVESLASVHVKAVAFGSKHTCAITV 331
Query: 269 EGRVYTFSWGNDAR-LGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
G + F WG A LG + N PH LG ++NI V +IA G + + S
Sbjct: 332 SGEL--FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT---S 386
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ------ 378
+++ G G G LGHG P+ +E + ++ V A G WH A + +
Sbjct: 387 SGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSV--ACGPWHTAAIVEVMSSFK 444
Query: 379 ----DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G++ TWG G LGH + + + +P V +L I V+ G T V++ G V
Sbjct: 445 GNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
++ G LG N ADG+ +V P LK E V +IS +S H
Sbjct: 505 FTIGSSRHGQLG-NPKADGESI--CSVEGP-----LK--TEFVREISSGSS-----HVAV 549
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
LT SGK++ +G G +GQLG+ + + R +P V+
Sbjct: 550 LTMSGKVFTWGKGAEGQLGL---GDYSNRSSPTLVE 582
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 38/341 (11%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q+IA G H+ +T +G VY++GS SSG+L P+ + SL + + A G+
Sbjct: 265 QSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK 324
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
T I+ +G+++ +G+ G G+ G + + + NI V + A G + T
Sbjct: 325 HTCAITVSGELFEWGE---GAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHT 381
Query: 264 AVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
A+++ G+++T+ G LGH P +VE +L+ V +A G + A
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVE------SLKGSRVKSVACGPWHTAA 435
Query: 319 LA--------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
+ PSG +++ G GKLGH R + P ++ +L + V+ G
Sbjct: 436 IVEVMSSFKGNAPSG-KLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDL--IQVSCGT 492
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
V+ G V T G R+G LG+ + ES+ V L +++G V++
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTM 552
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
G V+++G G LG + D ++N +P LV +L+
Sbjct: 553 SGKVFTWGKGAEGQLG---LGD-----YSNRSSPTLVEALE 585
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 28/277 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G H+ +TS G ++++G + G LGHG T+ RP+ + SL+G R+ A G
Sbjct: 372 SKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPW 431
Query: 208 RTMLISD----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
T I + +G+++ +G G+ + + KL+ P V+SL ++Q +
Sbjct: 432 HTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLL--PTCVDSLTAYDLIQVS 489
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G T VL+ G V+T +LG + + + + G L+ V +I++G ++
Sbjct: 490 CGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESICSVEGPLKTEFVREISSGSSHVA 548
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 372
L SG V++ G G G+LG G ++ P L+E + +++ VV AA H
Sbjct: 549 VLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLH 605
Query: 373 AAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 402
+ +D VC+ +G+ R + C G+ C S
Sbjct: 606 KTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 177/366 (48%), Gaps = 36/366 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+ A +G H++ + + G ++++G N+ GQLG+GT + P P+ +L GI + ++G
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV-NLTGITSV--SSGHR 458
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T + G V+++G + +G+ G + + ++P V L + + A G++ + L
Sbjct: 459 HTAALRLDGTVWSWGTNQYGQLGDGTRTDR--STPVQVPGLTGVTSI--ATGDYHSLALR 514
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G V+ + + +LG T + +P + G L NI V IAAG + LAL +
Sbjct: 515 SNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSG-LTNI--VSIAAGGGHSLALRSDGT--- 568
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G G+LG+G+RT P ++ L N+ V +AAG ++ + DG V WG+
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTILP--VQAVGLGNV--VSLAAGKMYSLALRADGTVWAWGY 624
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G + +VP V L+ + +I T Y + + DG V+++G LG
Sbjct: 625 NASGQLGVGTTQGSAVPLQVSGLSAITSITAGT--YHSLALRSDGWVWAWGFNFEGQLG- 681
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
N +D N LTP LV S+ + H+ A+ G L+A+G
Sbjct: 682 NGTSD-------NRLTPGLVVSMSNATAIFAG---------DLHSLAVRADGTLWAWGLN 725
Query: 508 DKGQLG 513
GQLG
Sbjct: 726 SHGQLG 731
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 38/370 (10%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E +AG HS+AV + G V+++G N QLG G P G+ ++ AG
Sbjct: 300 ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLV---AG 356
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ + G +++G + FG+ G + +P V L + A G T +
Sbjct: 357 FRHSVALGADGTAWSWGDNVFGQ--LGDTTFQPRMAPVQVTGLA-LGRADATSGQLHTVM 413
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L GR++ + N +LG+ T+ N P P+ + +++G+ + AL +
Sbjct: 414 LGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV----NLTGITSVSSGHRHTAALRLDGT- 468
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
V+S G G+LG G+RTD P Q+ L V +A G +H+ + +G V
Sbjct: 469 --VWSWGTNQYGQLGDGTRTDRSTP-----VQVPGLTGVTSIATGDYHSLALRSNGTVWG 521
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG+ RYG LG G + P V L ++ + +A G + + DG V++FG
Sbjct: 522 WGFNRYGQLGDGTTVDRTQPVQVSGLTNI--VSIAAGGGHSLALRSDGTVWAFGYNFDGQ 579
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+ G R +L Q V L V +SL ++ AL G ++A+
Sbjct: 580 LGN-------GTRTWTILPVQAV-GLGNV------VSLAAG---KMYSLALRADGTVWAW 622
Query: 505 GAGDKGQLGI 514
G GQLG+
Sbjct: 623 GYNASGQLGV 632
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 180/378 (47%), Gaps = 43/378 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR-- 208
+AG HS+A+ + G +S+G N GQLG T + R P++ + G+ + +A A +G+
Sbjct: 354 VAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQP--RMAPVQ-VTGLALGRADATSGQLH 410
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+++ G+++A+G ++ G+ GT+ +S L +L I V + G+ TA L
Sbjct: 411 TVMLGANGRLWAWGDNNQGQLG---NGTQQNSSLPLPVNLTGITSVSS--GHRHTAALRL 465
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G V+ SWG + +LG T + P + G V IA G + LAL +
Sbjct: 466 DGTVW--SWGTNQYGQLGDGTRTDRSTPVQVPGL---TGVTSIATGDYHSLALRSNGT-- 518
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+ G G+LG G+ D P ++ L N+ V +AAG H+ + DG V +G
Sbjct: 519 -VWGWGFNRYGQLGDGTTVDRTQP--VQVSGLTNI--VSIAAGGGHSLALRSDGTVWAFG 573
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ G LG+G +P VQA+ + +A G + + DG V+++G S LG
Sbjct: 574 YNFDGQLGNGTRTWTILP--VQAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLG 631
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ QG+ P V+ L + S+T Y H+ AL G ++A+G
Sbjct: 632 ---VGTTQGSA-----VPLQVSGLSAIT------SITAGTY---HSLALRSDGWVWAWGF 674
Query: 507 GDKGQLGIELVNNQTERG 524
+GQLG +N+ G
Sbjct: 675 NFEGQLGNGTSDNRLTPG 692
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 175/394 (44%), Gaps = 58/394 (14%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV S+G V+++G N GQLG GTT++ + P++ + AAG ++ + +
Sbjct: 61 HSLAVHSEGTVFAWGFNRLGQLGDGTTQD--KAAPVQVAGVASAVSVAAGDQYSLALDEN 118
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G ++ G+ G + P+ V L V A G L +G V+
Sbjct: 119 GDVWAWGDNASGQLGDGTLTPR--AQPRRVSGLTQ--GVSLASGFAHAVALRADGTVW-- 172
Query: 276 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+WG++ +LG T P P+ G + +V + AG LAL + V++ G
Sbjct: 173 AWGDNRSNQLGSATLTRSPVPIPVPGLSD---IVAVVAGGSSSLALRADGT---VWAWGD 226
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G+ P ++ NL V ++AGA+HA + DG WG+ +G
Sbjct: 227 NRYGQLGDGTTVRRAAP-----VRVANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQ 281
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG------ 446
LG G ++P V+ L + + V G+Y + V DG V+++G LG
Sbjct: 282 LGDGTTVQRTLP-VLIGLTETRT--VVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338
Query: 447 -----HNAIADG----QGNRHANVLTP-------------QLVTSLKQVNERVVQIS--- 481
H + G G RH+ L QL + Q VQ++
Sbjct: 339 SAVPLHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLA 398
Query: 482 --LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ HT L +G+L+A+G ++GQLG
Sbjct: 399 LGRADATSGQLHTVMLGANGRLWAWGDNNQGQLG 432
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 161/373 (43%), Gaps = 39/373 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG S+A+ + G V+++G N GQLG GTT R P+R + +AGA +
Sbjct: 206 VAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVR--RAAPVRVANLDAVTHISAGAYHAL 263
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G +A+G ++FG+ G T T P L+ + VV GN+ + + +G
Sbjct: 264 ALRADGTAWAWGYNAFGQLGDGT--TVQRTLPVLIGLTETRTVVA---GNYHSLAVRTDG 318
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ +WG++ T PL + V + AG+ + +AL + +S
Sbjct: 319 AVW--AWGDNRYRQLGTGNLTSSAVPLHAGMTG--GVTLVAGFRHSVALGADGT---AWS 371
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G + G+LG PR+ Q L L +G H ++G +GR+ WG
Sbjct: 372 WGDNVFGQLGD----TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNN 427
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG+G ++ S+P V N V++G T + DG V+S+G + LG
Sbjct: 428 QGQLGNGTQQNSSLPLPV---NLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGT 484
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
D TP V L V S+ Y H+ AL +G ++ +G
Sbjct: 485 RTDRS--------TPVQVPGLTGVT------SIATGDY---HSLALRSNGTVWGWGFNRY 527
Query: 510 GQLGIELVNNQTE 522
GQLG ++T+
Sbjct: 528 GQLGDGTTVDRTQ 540
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ S G V+ +G N GQLG GTT + R +P++ I+ AAG G ++ +
Sbjct: 509 HSLALRSNGTVWGWGFNRYGQLGDGTTVD--RTQPVQVSGLTNIVSIAAGGGHSLALRSD 566
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG + G+ G + ++ P L N VV A G ++ L +G V+ +
Sbjct: 567 GTVWAFGYNFDGQLGNGTRTWTIL--PVQAVGLGN--VVSLAAGKMYSLALRADGTVWAW 622
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ +LG T P + G + I AG + LAL S V++ G
Sbjct: 623 GYNASGQLGVGTTQGSAVPLQVSGL---SAITSITAGTYHSLAL---RSDGWVWAWGFNF 676
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG+G+ + P L+ + AG H+ V DG + WG +G LG
Sbjct: 677 EGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGT 732
Query: 396 GNEECESVPKVVQAL 410
G+ P VQ L
Sbjct: 733 GDTVEAWFPVQVQGL 747
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 108/260 (41%), Gaps = 29/260 (11%)
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V+ A+G + + + EG V+ + + +LG T + P + G V +AAG
Sbjct: 53 VRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVAS---AVSVAAGD 109
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y LAL V++ G G+LG G+ T PR + Q V +A+G HA
Sbjct: 110 QYSLALDENGD---VWAWGDNASGQLGDGTLTPRAQPRRVSGLT----QGVSLASGFAHA 162
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ DG V WG R LG VP V L+D+ A V G ++ + DG
Sbjct: 163 VALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVA--VVAGGSSSLALRADGT 220
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
V+++G LG DG R A P V +L V ++ Y H
Sbjct: 221 VWAWGDNRYGQLG-----DGTTVRRA---APVRVANLDAVTH------ISAGAY---HAL 263
Query: 494 ALTESGKLYAFGAGDKGQLG 513
AL G +A+G GQLG
Sbjct: 264 ALRADGTAWAWGYNAFGQLG 283
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS+A+ S G V++FG N GQLG+GT W P++++ ++ AAG ++
Sbjct: 555 AGGGHSLALRSDGTVWAFGYNFDGQLGNGT--RTWTILPVQAVGLGNVVSLAAGKMYSLA 612
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G ++ G + GV T+ P V L I + A G + + L +G
Sbjct: 613 LRADGTVWAWGYNASG--QLGVGTTQGSAVPLQVSGLSAITSITA--GTYHSLALRSDGW 668
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + + +LG+ T N + P L+ ++ N I AG + LA+ + +++
Sbjct: 669 VWAWGFNFEGQLGNGTSDNRLTPG-LVVSMSN--ATAIFAGDLHSLAVRADGT---LWAW 722
Query: 332 GCGLGGKLGHGSRTDEKHPRLIE 354
G G+LG G + P ++
Sbjct: 723 GLNSHGQLGTGDTVEAWFPVQVQ 745
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ Q L PV +A G +H+ V +G V WG+ R G LG G + ++ P VQ
Sbjct: 42 VRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAP--VQVAGV 99
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
A+ VA GD + + E+GDV+++G S LG DG A P+ V+ L Q
Sbjct: 100 ASAVSVAAGDQYSLALDENGDVWAWGDNASGQLG-----DGTLTPRAQ---PRRVSGLTQ 151
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+SL + AH AL G ++A+G QLG
Sbjct: 152 ------GVSLASGF---AHAVALRADGTVWAWGDNRSNQLG 183
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 146 ENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL 194
N+ AI AG HS+AV + G ++++G NS GQLG G T E W P ++ L
Sbjct: 698 SNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 167/354 (47%), Gaps = 32/354 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++ +GS G+LG G E+E + PR + + + Q A G T+ I++ GQVY+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR- 282
+ +G+ + +L QL+ L + A G+ T ++ G++ FSWG + +
Sbjct: 61 NDYGQLGHEKARKRL----QLIPGLDAFVFKKIACGSCHTLAVNEWGQL--FSWGCNMKG 114
Query: 283 -LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
LG ++ ++ L +VQIA G + +AL + +YS G G+LG
Sbjct: 115 QLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT---NDGELYSWGSNREGQLGI 171
Query: 342 GSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
GS T E P+ I L + +A G +H V+ + G V WG +G LG + +
Sbjct: 172 GSHTVTEIKPKRI--ITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQ 229
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
VP ++ L + K + A G+ + ++ DG V++ G G LGH G G N
Sbjct: 230 RIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGH-----GNG---MN 281
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
+ P+ V L + V QIS HT AL S G++YA+G G GQLG
Sbjct: 282 EILPRQVMEL--MGSTVTQISCGKR-----HTLALVPSRGRVYAWGLGGAGQLG 328
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 6/206 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HSIA+T+ G +YS+GSN GQLG G+ T E +P+ I +L + I A G
Sbjct: 141 QIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGY 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T++IS +G V+A+G+++FG+ G+ T+ P + +L+N V AA G F+ L+
Sbjct: 201 HTVVISKSGVVFAWGRNTFGQL--GLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G V+T G +LGH N++ P ++ L V QI+ G + LAL PS
Sbjct: 259 LDGGVFTCGAGMYGQLGHGNGMNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLI 353
VY+ G G G+LG+ + P ++
Sbjct: 316 VYAWGLGGAGQLGNRASRSATTPLVV 341
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 23/312 (7%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E Q G +++ +T+ G VYS G+N GQLGH + R + I L + A G
Sbjct: 35 EVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARK--RLQLIPGLDAFVFKKIACG 92
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTA 264
+ T+ +++ GQ++++G + G+ G+ +P++V++L +VQ A G +
Sbjct: 93 SCHTLAVNEWGQLFSWGCNMKGQL--GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSI 150
Query: 265 VLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
L+ +G +Y SWG++ +G HT +++P ++ TL +P+ IA G + + ++
Sbjct: 151 ALTNDGELY--SWGSNREGQLGIGSHT-VTEIKPKRII-TLAAVPIAFIACGGYHTVVIS 206
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--EQFQLLNLQPVVVAAGAWHAAVVGQ 378
SG+ V++ G G+LG ++ R++ + L N + A G + +
Sbjct: 207 --KSGV-VFAWGRNTFGQLG----LNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTL 259
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 437
DG V T G G YG LGHGN E +P+ V L ++ G +T +V G VY++
Sbjct: 260 DGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAW 319
Query: 438 GCGESASLGHNA 449
G G + LG+ A
Sbjct: 320 GLGGAGQLGNRA 331
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++AV G ++S+G N GQLG + + E PR +++L I+Q A G ++
Sbjct: 92 GSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+++ G++Y++G + E + G+ G+ VT P+ + +L + + A G + T V+S+
Sbjct: 152 LTNDGELYSWGSNR--EGQLGI-GSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS 208
Query: 270 GRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G V F+WG + +LG + + P L TL N V A G + + L
Sbjct: 209 GVV--FAWGRNTFGQLGLNDTQQRIVPCQL-RTLRNAKVCYAACGEEFSVFLTLDG---G 262
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+ G+LGHG+ +E PR + +L+ ++ G H A+V GRV WG
Sbjct: 263 VFTCGAGMYGQLGHGNGMNEILPRQV--MELMGSTVTQISCGKRHTLALVPSRGRVYAWG 320
Query: 387 WGRYGCLGHGNEECESVPKVV 407
G G LG+ + P VV
Sbjct: 321 LGGAGQLGNRASRSATTPLVV 341
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 275 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
F WG+ LG + N P + N V QIA G Y + + + VYS
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFMPRQVDFAKAN-EVEQIACGENYTVTIT---NDGQVYS 57
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LGH K +LI + + A G+ H V + G++ +WG
Sbjct: 58 CGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKI--ACGSCHTLAVNEWGQLFSWGCNMK 113
Query: 391 GCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG + +C E P++V+AL + +A G + ++ DG++YS+G LG
Sbjct: 114 GQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLG--- 170
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
G+ + P+ + +L V + HT +++SG ++A+G
Sbjct: 171 ----IGSHTVTEIKPKRIITLAAVPIAFIACG-------GYHTVVISKSGVVFAWGRNTF 219
Query: 510 GQLGIELVNNQTERGNP 526
GQLG+ N+ +R P
Sbjct: 220 GQLGL---NDTQQRIVP 233
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++ G + G+LG G DE PR ++ + ++ + A G + + DG+V +
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQI--ACGENYTVTITNDGQVYSC 58
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH E+ +++ L+ +A G T V+E G ++S+GC L
Sbjct: 59 GNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G N++ + TP++V +L +VQI+ H+ ALT G+LY++G
Sbjct: 117 GLNSVDCTER-------TPRMVKALG--TSVIVQIACGIE-----HSIALTNDGELYSWG 162
Query: 506 AGDKGQLGI 514
+ +GQLGI
Sbjct: 163 SNREGQLGI 171
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ ++ GVV+++G N+ GQLG T++ P +R+L+ ++ AA G ++ +
Sbjct: 198 GGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFL 257
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ V L V Q + G T A++ GR
Sbjct: 258 TLDGGVFTCGAGMYGQLGHGNGMNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGR 315
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG+ + P +LG
Sbjct: 316 VYAWGLGGAGQLGNRASRSATTPLVVLG 343
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 20/346 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 206
Q + G + V G + + G S G+LG G +++ + PI +LQG +IQ A
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGS 581
Query: 207 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++ ++D+G+V+++G +G+ +G + P+ +E+L+ VV A G +AV
Sbjct: 582 DGHSLALTDSGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALRGEEVVNMACGFKHSAV 639
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLGH N P + LE + Q+A G + L L+ G
Sbjct: 640 VTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSA--DG 696
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG GS T + P+ I+ + + + G + V+ DGRV ++
Sbjct: 697 NTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKK--ICCGTQFSVVLTNDGRVFSF 754
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R G P+ +QAL V G ++ G+V+ +G L
Sbjct: 755 GQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQL 814
Query: 446 GHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G H+N P ++ LK N R + +S W A
Sbjct: 815 GLG---------HSNAQREPCVIPDLKGKNIRQISAGRNHSAAWTA 851
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D I Q + + + G+ H+ + G V +WG
Sbjct: 540 LACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGD 599
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + +++A G + VV+ DG +++FG G+ LGH
Sbjct: 600 GDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGH 659
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 506
GN AN TP+ VT+L++ V L HT L+ G ++AFG
Sbjct: 660 -------GN-SANKKTPERVTALEKHAIGQVACGLN-------HTLVLSADGNTVWAFGD 704
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GD G+LG+ + T + +P+ +D+
Sbjct: 705 GDYGKLGL---GSCTAKTSPQAIDV 726
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 143/327 (43%), Gaps = 53/327 (16%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P + +SL + Q G T V+ G + G+ RLG + P+
Sbjct: 508 VNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPI- 564
Query: 299 GTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
L+ V+QIA G+ +LA SG V+S G G GKLGHG+ ++ PR I
Sbjct: 565 SALQGYVVIQIATSRGSDGH----SLALTDSG-EVFSWGDGDYGKLGHGNSDRQRRPRQI 619
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E L + V +A G H+AVV DG++ T+G G YG LGHGN + P+ V AL
Sbjct: 620 EA--LRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKH 677
Query: 414 KAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLT--------- 463
VA G T V+S DG+ V++FG G+ LG + + +VL
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICC 737
Query: 464 ----PQLVTSLKQV----NERVV--------------QISLTNSIYWN------AHTFAL 495
++T+ +V ER+ QI S + + H AL
Sbjct: 738 GTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLAL 797
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTE 522
T +G+++ +G GQLG+ N Q E
Sbjct: 798 TSTGEVWGWGNNVDGQLGLGHSNAQRE 824
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 160/342 (46%), Gaps = 27/342 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS G+LG G EEE PR + Q + QAA G T+L++ G++Y G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 281
+ G+ + PQ + +L+N V Q + G + L+ G++ FSWG++A
Sbjct: 63 NDHGQLGHDTNNLP-NKRPQFISALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATG 119
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + ++ ++ VVQI+ G+ + LAL + +++ G G+LG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT---NSGELFAWGANEYGQLGL 176
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G+ T +K P L + +A G H+ V + G + WG +G LG + +
Sbjct: 177 GT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P ++ L + +++ GD + ++++G V++ G G LGH H N
Sbjct: 236 CYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT--------HGNE 287
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 502
+ P++V L + ++ QI+ HT A S GK+Y
Sbjct: 288 ILPRMVFEL--MGSKITQIACGRK-----HTLAFVPSRGKVY 322
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 207
QA G H++ +T G +Y+ G+N GQLGH T RP+ I +L+ + Q + G
Sbjct: 40 QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLS 99
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ +++ GQ++++G ++ G+ + + +P++++S+ VVQ + G+ L+
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALT 158
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
G + F+WG + +LG T V L+ +L IP+ IA G + + A SG
Sbjct: 159 NSGEL--FAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNH--SFAVSKSG 214
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
A++ G G+LG +P ++ + L ++ ++ G + + Q+G V T
Sbjct: 215 -AIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR--YISCGDDFSVFLTQEGGVFTC 271
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 435
G G +G LGHG E +P++V L K +A G +T V G VY
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 206
+Q G HS+A+T+ G ++S+GSN++GQLGH + PR I+S+ ++Q + G
Sbjct: 92 TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++++G+++A+G + +G+ G G K+ T+ LV+SL I + A G + +
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTAT-LVKSLAGIPIAFIACGGNHSFAV 210
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
S+ G + F WG + +LG + + P L TL ++ V I+ G + + L Q
Sbjct: 211 SKSGAI--FGWGKNTFGQLGLNDLDSRCYPTQ-LKTLRSLGVRYISCGDDFSVFLT-QEG 266
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 382
G V++ G G G+LGHG+ +E PR++ F+L+ + +A G H A V G+V
Sbjct: 267 G--VFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 24/299 (8%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+Y +G GE G + V +P+ ++ + V QAA G T +L+++G++YT
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LGH T + + LEN V Q++ G + LAL + ++S G G
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119
Query: 338 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
+LGH PR+I+ + V ++ G H + G + WG YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177
Query: 397 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+ VP +V++L + +A G +F VS+ G ++ +G LG N +
Sbjct: 178 TTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---- 232
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P + +L+ + R + S++ LT+ G ++ G G GQLG
Sbjct: 233 ----DSRCYPTQLKTLRSLGVRYISCGDDFSVF-------LTQEGGVFTCGLGTFGQLG 280
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 385 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG +G LG G E E V P+ + A G T ++++DG +Y+ G +
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH+ + N+ PQ +++L+ N V Q+S S H+ ALT G+L+
Sbjct: 66 GQLGHDT--NNLPNKR-----PQFISALE--NYIVTQVSCGLS-----HSLALTNWGQLF 111
Query: 503 AFGAGDKGQLGIEL 516
++G+ GQLG +L
Sbjct: 112 SWGSNATGQLGHDL 125
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 22 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 56
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 57 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHI 116
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +
Sbjct: 117 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSD 175
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVY 232
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 233 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 290
Query: 390 YGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ +S P V D + I +T+ ++ G VY +G C G+S L
Sbjct: 291 YGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILP 350
Query: 447 H 447
H
Sbjct: 351 H 351
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + + +A G V + G+VY +G + LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 244 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 288
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 168/364 (46%), Gaps = 42/364 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQSIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N SG LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVDDEIFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N V+ IA G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESA 443
YG LG GN+ +S P V D + A H A +T+ ++ G VY +G C G+S
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSV 342
Query: 444 SLGH 447
L H
Sbjct: 343 VLPH 346
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
Length = 1012
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 152/301 (50%), Gaps = 27/301 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ---------GIRIIQA- 202
G H+ VT + V+++G SG+LGHG ++PR + SL G+++++
Sbjct: 269 GVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLL 328
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G T L + +G++Y FG +FG +G + T ++ P+ VESLK + + + G +
Sbjct: 329 SCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRTISVSCGVWH 386
Query: 263 TAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
TA + + G+++T+ G+ RLGH + ++P + +L + + G+
Sbjct: 387 TAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDYNFHKAVCGH 445
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ L SG +++ G + G+LG+ + D ++PRL+E+ +L V V GA+H
Sbjct: 446 TLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVVEVVCGAYHV 500
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
AV+ Q G V TWG G G LGHG+ P V+AL D +A G T + +
Sbjct: 501 AVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKS 560
Query: 434 V 434
V
Sbjct: 561 V 561
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 37/254 (14%)
Query: 278 GNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G+D+ T D+ P PL E+ ++ ++ C + A V++ G
Sbjct: 235 GSDSNAYSATAATDILVPKPL----ESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECS 290
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQ--PV------VVAAGAWHAAVVGQDGRVCTWGWG 388
G+LGHG+ T PRL+E + N++ PV +++ G WH A+ G++ T+G G
Sbjct: 291 GRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDG 350
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGC 439
+G LGHGN E S PK V++L ++ I V+ G + T V E G ++++G
Sbjct: 351 TFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGD 410
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH G+R + L P V SL + + ++ + T LT SG
Sbjct: 411 GDKYRLGH-------GDRSSK-LKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSG 455
Query: 500 KLYAFGAGDKGQLG 513
++ G+ GQLG
Sbjct: 456 HIFTAGSSVYGQLG 469
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 288
Y + P+ +ES + V A G A+++R+ V F+WG + RLGH
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEV--FTWGEECSGRLGHGAG 298
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGMAVYSVGCGLGGKLGH 341
+ +P L+ +L V + G + L+C + S +Y+ G G G LGH
Sbjct: 299 TSIFQPR-LVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGH 357
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGC 392
G+R +P+ +E L L+ + V+ G WH A V + G++ TWG G
Sbjct: 358 GNRETISYPKEVES--LKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYR 415
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGHG+ + P V +L D G T ++ G +++ G LG N D
Sbjct: 416 LGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNND 474
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G+ P+LV E++ + + H LT+SG++Y +G G G+L
Sbjct: 475 GR--------YPRLV------EEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRL 520
Query: 513 G 513
G
Sbjct: 521 G 521
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + A G L++ +V+ +G++ G +G GT + P+LVES
Sbjct: 252 PKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVES 309
Query: 248 LK--NIFVVQAAI--------GNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDV 292
L N+ + + G + TA+ + G++YTF G LGH P +V
Sbjct: 310 LSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEV 369
Query: 293 EPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
E L T+ + V AA ++A + SG +++ G G +LGHG R+ + P
Sbjct: 370 ESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSG-KLFTWGDGDKYRLGHGDRSSKLKPT 428
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+ N V H +G G + T G YG LG+ N + V +
Sbjct: 429 CVPSLIDYNFHKAVCG----HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEK 484
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L + V G Y V+++ G+VY++G G + LGH IAD + TP V +
Sbjct: 485 LGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRK--------TPTFVEA 536
Query: 470 LK 471
L+
Sbjct: 537 LR 538
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 43/384 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++AV G V++ G N G+LG+GT + P + +L G+ I AAG ++ +
Sbjct: 4 GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTGV--ISVAAGYYHSLAL 61
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+A+G +++G G T T P V +L + + A F L +G V
Sbjct: 62 KSDGTVWAWGLNTYGN--LGDNTTTTRTKPVQVLNLTGVIAIAADYYQSF--ALKSDGTV 117
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPSGMA 327
+++ + ++ LG+ + P + + I VV IAAG + LAL +
Sbjct: 118 WSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGT--- 174
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G+LG+G+ + Q +NL V ++AGA H+ + +G V +WG
Sbjct: 175 VWSWGLNSSGQLGNGTLATQS-----AAVQAVNLTDAVAISAGAAHSLALRANGAVVSWG 229
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG+G + P V LN++K++ A G + + DG V ++G +G
Sbjct: 230 ANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AAGGNHSLALKSDGTVTAWGYNAYGQVG 287
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFG 505
+ A ANVL+P V++L V +S H+ A+ S G ++ +G
Sbjct: 288 NGAT--------ANVLSPIAVSTLSGVTAVSAGVS---------HSHAIGSSNGVIWGWG 330
Query: 506 AGDKGQLGIELVNNQTERGNPERV 529
G LG N + R P +
Sbjct: 331 LNTYGGLG---NNTKVNRSTPGTI 351
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 36/362 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V S+G+N+ GQLG+GTT P + L I+ + AAG ++
Sbjct: 211 AGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AAGGNHSLA 268
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V A+G +++G+ G T V SP V +L + V A + + A+ S G
Sbjct: 269 LKSDGTVTAWGYNAYGQVGNGA--TANVLSPIAVSTLSGVTAVSAGVSHSH-AIGSSNGV 325
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
++ + LG++T+ N P +L T + +A G + + + + V++
Sbjct: 326 IWGWGLNTYGGLGNNTKVNRSTPGTILLTSG---LQGVAGGAQHTIYVKGDGT---VWAW 379
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G++G G+ R + QL L ++ VAAGA H+ + +G V WG +
Sbjct: 380 GSNTYGQIGDGTPL-----RRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWGRNNH 434
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G+ S+P V L + A+ A G + + DG VY++G LG
Sbjct: 435 GQLGDGSTTNRSLPTQVPNLTGIVAL--AAGATHSLALRFDGTVYAWGRNHLGQLGDETC 492
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D L+P V L E+VV IS ++ H+ A+ ++G +A+G+ + G
Sbjct: 493 TD--------RLSPVAVHYL----EKVVAISAGDN-----HSLAIHQNGTAFAWGSDEHG 535
Query: 511 QL 512
QL
Sbjct: 536 QL 537
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 164/378 (43%), Gaps = 37/378 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ S G V+S+G NSSGQLG+GT + ++++ + +AGA ++
Sbjct: 161 AGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQ--SAAVQAVNLTDAVAISAGAAHSLA 218
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V ++G +++G+ G T SP V L NI + AA GN A L +G
Sbjct: 219 LRANGAVVSWGANTYGQLGNGT--TTTSASPVGVSGLNNIKSL-AAGGNHSLA-LKSDGT 274
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V + + ++G+ N + P + TL + V + + A S ++
Sbjct: 275 VTAWGYNAYGQVGNGATANVLSP-IAVSTLSGVTAVSAGVSHSH----AIGSSNGVIWGW 329
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G LG+ ++ + P I LL VA GA H V DG V WG YG
Sbjct: 330 GLNTYGGLGNNTKVNRSTPGTI----LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYG 385
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
+G G P + L + I VA G + ++ +G V+++G LG +
Sbjct: 386 QIGDGTPLRRLTPVQLSTLTGI--IAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTT 443
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
NR P L +V ++ + H+ AL G +YA+G GQ
Sbjct: 444 ----NRSLPTQVPNLT--------GIVALAAGAT-----HSLALRFDGTVYAWGRNHLGQ 486
Query: 512 LGIELVNNQTERGNPERV 529
LG E T+R +P V
Sbjct: 487 LGDETC---TDRLSPVAV 501
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 25/366 (6%)
Query: 149 QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q +AG H+I V G V+++GSN+ GQ+G GT P + +L GI I AAGA
Sbjct: 358 QGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTGI--IAVAAGAN 415
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ ++ G V+A+G+++ G+ G + + P V +L I + A G + L
Sbjct: 416 HSLALAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVPNLTGIVALAA--GATHSLALR 471
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G VY + + +LG T + + P + LE VV I+AG + +LA +G A
Sbjct: 472 FDGTVYAWGRNHLGQLGDETCTDRLSPVAVH-YLE--KVVAISAGDNH--SLAIHQNGTA 526
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
++ G G+L + LI Q + ++ + +AAGA H ++ +G G
Sbjct: 527 -FAWGSDEHGQLCDSGSGSGRFSPLISQIPGI-VKGIGIAAGANHTLLLEANGTAWACGD 584
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
YG LG G +S P + L + A +A G T+ ++ +G V ++G S LG
Sbjct: 585 NLYGQLGDGTTTDKSAPVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLNSSGQLGD 642
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
N A + P L T V SL AH A+ G ++++G
Sbjct: 643 NTTAS------RTTIAPVLRTVYPTVEVFSGVASLGAGT---AHLTAVKTDGYVHSWGLN 693
Query: 508 DKGQLG 513
D GQ+G
Sbjct: 694 DSGQIG 699
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 35/315 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G N+ GQLG G+T P + +L G I+ AAGA ++
Sbjct: 412 AGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLA 469
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G VYA+G++ G + G + SP V L+ + + A G+ + + + G
Sbjct: 470 LRFDGTVYAWGRNHLG--QLGDETCTDRLSPVAVHYLEKVVAISA--GDNHSLAIHQNGT 525
Query: 272 VYTFSWGNDARLGHHTEPNDVEP-----HPLLGTLENI-PVVQIAAGYCYLLALACQPSG 325
F+WG+D H + D PL+ + I + IAAG + L L + +G
Sbjct: 526 A--FAWGSD----EHGQLCDSGSGSGRFSPLISQIPGIVKGIGIAAGANHTLLL--EANG 577
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
A ++ G L G+LG G+ TD+ P I +AAG +A + +G V TW
Sbjct: 578 TA-WACGDNLYGQLGDGTTTDKSAPVPITTLT----NAARLAAGGNTSAALTTNGTVSTW 632
Query: 386 GWGRYGCLGHGNEEC--------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G G LG +V V+ + V ++ T T V DG V+S+
Sbjct: 633 GLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLT--AVKTDGYVHSW 690
Query: 438 GCGESASLGHNAIAD 452
G +S +G + +
Sbjct: 691 GLNDSGQIGDGTLVN 705
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ +S P V D + I +T+ ++ G VY +G C G+S L
Sbjct: 286 YGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILP 345
Query: 447 H 447
H
Sbjct: 346 H 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS+A+T + V+++G GQLGHG + W P ++ LQG I G
Sbjct: 95 QIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYEN 154
Query: 209 TMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
T I+ G+V F GK G+ + G+ G V P ++SL ++QA G F+
Sbjct: 155 TFAITGTGKVLGFGSAASGKLGNGDVDGGIGGN--VYLPVQLKSLAKFTIIQATGGKNFS 212
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLA 318
LS G++Y+ + + +LG E + P GT++ + V ++ G + LA
Sbjct: 213 MFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLA 272
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 377
L+ G+ VYS G G+ LGHG D P+++ +L P V V+AG +H+A V
Sbjct: 273 LS--EDGI-VYSWGSGINWALGHGGTEDTFTPKMVA---MLEADPCVSVSAGGYHSAAVS 326
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
GR+ TWG G LG G + VQ L
Sbjct: 327 ATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRL 359
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 14/324 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++ ++ G VYS+G N S Q GHG + +W PR IR+L+ ++++Q AAG ++
Sbjct: 46 GGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVA 105
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++D +V+ +G+ G+ +G V P LV+ L+ + G T ++ G+
Sbjct: 106 LTDRSEVFTWGRGLHGQLGHG--DVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK 163
Query: 272 VYTFSWGNDARLGHHTEPNDVEPH---PL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 327
V F +LG+ + + P+ L +L ++Q G + + L+
Sbjct: 164 VLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQ--- 220
Query: 328 VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+YSVG G+LG E + +++ + V+ G H+ + +DG V
Sbjct: 221 LYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVY 280
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G LGHG E PK+V L + V+ G Y + VS G +Y++G
Sbjct: 281 SWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVG 340
Query: 444 SLGHNAIADGQGNRHANVLTPQLV 467
LG D H L +++
Sbjct: 341 QLGTGQNIDDHSADHVQRLPTRVI 364
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 164/360 (45%), Gaps = 34/360 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPR---PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
VYS G + G+LG +E R P+ +LQ + + A G +L+S AG+VY++G
Sbjct: 6 VYSCGHGAGGRLG--LNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG 63
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
+ + +GV+ P+ + +L+ + VVQ A G + L+ V+T+ G +
Sbjct: 64 YNDSRQTGHGVEDLS-DWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQ 122
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LG H + +DV L+ L+ + I GY A+ V G GKLG+G
Sbjct: 123 LG-HGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGK---VLGFGSAASGKLGNG 178
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
+ QL +L + G + + G++ + G+ G LG EE
Sbjct: 179 DVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEE 238
Query: 400 CESV----PKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
ES+ +Q ++ V +V+ GD + +SEDG VYS+G G + +LGH D
Sbjct: 239 VESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTED- 297
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP++V L E +S++ Y H+ A++ +G++Y +G GQLG
Sbjct: 298 -------TFTPKMVAML----EADPCVSVSAGGY---HSAAVSATGRIYTWGRNFVGQLG 343
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
VY+ G RLG + E LGTL+++ V +A G + L L+ VYS
Sbjct: 6 VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLS---RAGKVYSW 62
Query: 332 GCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G + GHG + PR I + ++ V +AAG H+ + V TWG G +
Sbjct: 63 GYNDSRQTGHGVEDLSDWEPRWIRALE--TVKVVQIAAGEDHSVALTDRSEVFTWGRGLH 120
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG+ P +V+ L + G TF ++ G V FG S LG+ +
Sbjct: 121 GQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDV 180
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G G NV P + SL + ++Q + + + L+ +G+LY+ G G
Sbjct: 181 DGGIG---GNVYLPVQLKSLAKFT--IIQATGGKNF-----SMFLSHTGQLYSVGYAANG 230
Query: 511 QLGI 514
QLGI
Sbjct: 231 QLGI 234
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ +S P V D + I +T+ ++ G VY +G C G+S L
Sbjct: 286 YGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILP 345
Query: 447 H 447
H
Sbjct: 346 H 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306
>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
Length = 494
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 50/368 (13%)
Query: 148 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L ++ AA G
Sbjct: 123 SCVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACG 182
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T+ ++D G VY+FG++ G+ Q T V SP L+ S +V+ A G F+ V
Sbjct: 183 RNHTLALTDNGSVYSFGENKLGQLGQCSQ-TYAVLSPALI-SYDGQPLVKVACGAEFSMV 240
Query: 266 LSREGRVYTFSWGNDARLGHHTEPN------------DVEPHPLLGTLE----------- 302
+ +G +Y+F +LGH+++ ++ P + +E
Sbjct: 241 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVP 300
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
N+ V +A G + L L Q V+S G G G+LGH + DE PRLI+ F
Sbjct: 301 NVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRG 357
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
+ G + V ++G + WG + + + E PK VQ L K +A G
Sbjct: 358 ASQIYTGYQCSFAVTENGSLSFWG------VTNTSRESTMYPKAVQDLGGWKIRSLACGK 411
Query: 423 YTTFVVSEDGDVYSFG----CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
++ +++ D S+G CGE LG+ N+ + T Q V +L V V
Sbjct: 412 -SSIILAADESTISWGPSPTCGE---LGYG------DNKPKSSTTAQEVKTLDGVYVEKV 461
Query: 479 QISLTNSI 486
+ ++S+
Sbjct: 462 MMGYSHSL 469
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRLEAPKLI 168
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E L + V A G H + +G V ++G + G LG ++ + + + +
Sbjct: 169 EG--LADHLVVAAACGRNHTLALTDNGSVYSFGENKLGQLGQCSQTYAVLSPALISYDGQ 226
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 469
+ VA G + VV G++YSFGC E LGHN+ IA Q + P+ +
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAI 286
Query: 470 LKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ ++ + + N + + HT L +++++G G G+LG
Sbjct: 287 FIEKSKDGQVMPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 335
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 34/131 (25%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 442
WG RYGCL NDV+ V +G + +++ +G ++S+G E
Sbjct: 109 WGPHRYGCL-----------------NDVQVSCVVSGPCAAHSLLITTEGKLWSWGRNEK 151
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH G R + P+L+ L + VV + + HT ALT++G +Y
Sbjct: 152 GQLGH-----GDTKR---LEAPKLIEGL--ADHLVVAAACGRN-----HTLALTDNGSVY 196
Query: 503 AFGAGDKGQLG 513
+FG GQLG
Sbjct: 197 SFGENKLGQLG 207
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 179/401 (44%), Gaps = 53/401 (13%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEE----------WRPRPIRSLQGIRIIQAAAGAGRTMLI 212
+ +VY++G++ G GH +EE +RP+ + SLQ I A G G T+ +
Sbjct: 29 RSIVYAWGNSDGGWTGHLPSEEYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFV 88
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ GQVY+ G +G+ G+ K V L++S+ V+ A G+ + ++ +G +
Sbjct: 89 TQQGQVYSSGVGRYGQL--GLGSLKEVEGITLIDSIPEK-VITCAAGDRHSLFVTEQGHL 145
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSGMAVYS 330
Y+ +G LG T +E L+ +L E ++++AAG+ + +AL+ SG VYS
Sbjct: 146 YSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALS--ESG-KVYS 202
Query: 331 VGCGLGGKLGHGS--------------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
G G LGHG R E PRLI + ++ + +G HA +
Sbjct: 203 FGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSG--HAFAI 260
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++G WG GRY C NE P+ + L + +G T +++ G V++
Sbjct: 261 NKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPGPWK-QIVSGGAHTLGLTKGGQVWA 319
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G L G G + + P++V L Q + +Q + + A+
Sbjct: 320 WGVNHFGCL-------GVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFF----SMAVD 368
Query: 497 ESGKLYAFGAGDKGQLGI-------ELVNNQTERGNPERVD 530
G +Y++G G G LG E V Q E+G P +VD
Sbjct: 369 SEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVD 409
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 27/313 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G G ++ VT +G VYS G GQLG G+ +E I S+ ++I AAG ++ +
Sbjct: 81 GQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLIDSIP-EKVITCAAGDRHSLFV 139
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREG 270
++ G +Y+ G GE G ++ T PQLVESL + +++ A G+ F+ LS G
Sbjct: 140 TEQGHLYSCGYGKRGELGLGTISRRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESG 198
Query: 271 RVYTFSWGNDARLGHHTEP------------NDVEPHP-LLGTLENIPVVQIAAGYCYLL 317
+VY+F ND LGH P ++E P L+ LE + I+ G +
Sbjct: 199 KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGH-- 256
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A A G+A + GCG + + + P+ + F L +V+ GA H +
Sbjct: 257 AFAINKEGVA-FGWGCGRYHCFATDNEVNWEQPQAL--FHLPGPWKQIVSGGA-HTLGLT 312
Query: 378 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQAL--NDVKAIH-VATGDYTTFVVSEDGD 433
+ G+V WG +GCLG G + P++V+ L + I +A G + + V +G
Sbjct: 313 KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGY 372
Query: 434 VYSFGCGESASLG 446
VYS+G G + +LG
Sbjct: 373 VYSWGRGHAGALG 385
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSL--QGIRIIQAAAGAGR 208
AG HS+ VT +G +YS G G+LG GT P+ + SL + +II+ AAG G
Sbjct: 131 AGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGF 190
Query: 209 TMLISDAGQVYAFGKDSFGEAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQA 256
++ +S++G+VY+FG + G +G V G + TSP+L+ +L+ +
Sbjct: 191 SIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYI 250
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ G+ +++EG + + G E N +P L P QI +G +
Sbjct: 251 SCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHT 308
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAA 374
L L G V++ G G LG G RT PR++E+ +P+ +AAG + +
Sbjct: 309 LGLT---KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSM 365
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
V +G V +WG G G LG G EE + P +Q
Sbjct: 366 AVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQ 399
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 109/258 (42%), Gaps = 29/258 (11%)
Query: 140 EACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--------------E 183
E+ R E + AG G SIA++ G VYSFGS + G LGHG
Sbjct: 172 ESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRN 231
Query: 184 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
E PR IR+L+ ++ + G+G I+ G + +G + + PQ
Sbjct: 232 METSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY--HCFATDNEVNWEQPQ 289
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGT 300
+ L + Q G T L++ G+V+ + + LG T P EP +
Sbjct: 290 ALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPG--EPRIVEKL 346
Query: 301 LENI--PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
L+ P+ IAAG+ + +A+ + VYS G G G LG G D+ P I+ Q
Sbjct: 347 LQQAKEPIQWIAAGWFFSMAVDSEG---YVYSWGRGHAGALGTGEEEDKWEPVAIQNEQG 403
Query: 359 LNLQPVVVAAGAWHAAVV 376
LQ + AG +A V
Sbjct: 404 EPLQVDRIYAGFNYAIAV 421
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRT 209
AG S+AV S+G VYS+G +G LG G E++W P I++ QG +++ + AG
Sbjct: 359 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 418
Query: 210 MLISD 214
+ + D
Sbjct: 419 IAVKD 423
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 154/338 (45%), Gaps = 34/338 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G L + G+V+A+G++ G +G ++ P+LVE+
Sbjct: 246 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEA 303
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G +YT+ G N LG+ + P + G LE +
Sbjct: 304 LAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQ 363
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ ++ G + A S V++ G G G LGHG R +P+ +E L + +
Sbjct: 364 VLSVSCGSWHS---ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEA--LSGFRTMK 418
Query: 366 VAAGAWHAAVVGQDG----------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
VA G WH+A + + ++ TWG G LGHG+++ VP VQ+L D
Sbjct: 419 VACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSF 478
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
VA G T +S G V++ G + LG N +DG+ P V + E
Sbjct: 479 HQVACGHSMTIALSTSGHVFTMGSSSNGQLG-NPKSDGK--------QPIPVQD-RLSGE 528
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +IS + H LT ++Y +G G G+LG
Sbjct: 529 LVEEISCG-----SCHVAVLTSRSEVYTWGMGANGRLG 561
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 155/298 (52%), Gaps = 27/298 (9%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQA 202
N + IA G H+ AVT+ G +Y++G + G LG+G W P+ + L+G++++
Sbjct: 308 NVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSV 367
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G+ + L + +G+V+ FG +FG +G + T V P+ VE+L ++ A G +
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKRET--VGYPKEVEALSGFRTMKVACGLWH 425
Query: 263 TA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
+A V+SR ++YT+ G+ +LGH + + + P + +L + Q+A
Sbjct: 426 SAAIVESSNHVSINVISR--KLYTWGAGDKNQLGHGDKDSRLVP-TCVQSLIDYSFHQVA 482
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G+ +AL+ + V+++G G+LG+ ++D K P + Q +L ++ G+
Sbjct: 483 CGHSMTIALS---TSGHVFTMGSSSNGQLGN-PKSDGKQPIPV-QDRLSGELVEEISCGS 537
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
H AV+ V TWG G G LGHG E + P +V+AL D +A G ++TT +
Sbjct: 538 CHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 595
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G V++FG + G LGHG E P+ + +L G R ++ A G + I
Sbjct: 370 GSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAI 429
Query: 213 SDAG----------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
++ ++Y +G + +G + ++LV P V+SL + Q A G+
Sbjct: 430 VESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLV--PTCVQSLIDYSFHQVACGHSM 487
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T LS G V+T ++ +LG + + + +P P+ L V +I+ G C++ L
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLG-NPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLT-- 544
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S VY+ G G G+LGHG D+K P L+E + +++ + + H V G
Sbjct: 545 -SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSG 603
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECE--SVPKVVQA 409
D VC+ + R+ C G C S KV++A
Sbjct: 604 ADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKA 644
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 47/324 (14%)
Query: 212 ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
I G VY +G+ + G Y ++ P+ +ES + V Q A G A+
Sbjct: 211 IESLGDVYVWGEVWTDVIPAEGSTNYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 269
Query: 266 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+R+G V F+WG + RLGH T+ D+ L+ L V IA G + A+
Sbjct: 270 TTRQGEV--FAWGEELGGRLGHGTDA-DISRPKLVEALAVSNVEYIACGEFHTCAVTASG 326
Query: 324 S----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
G Y+VG LG+G+ P+ + L +Q + V+ G+WH+A+
Sbjct: 327 DLYTWGDGYYNVGL-----LGNGAGASHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSS 380
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD------ 433
G+V T+G G +G LGHG E PK V+AL+ + + VA G + + + E +
Sbjct: 381 GKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINV 440
Query: 434 ----VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+Y++G G+ LGH G++ + L P V SL ++ Q++ +S+
Sbjct: 441 ISRKLYTWGAGDKNQLGH-------GDKDSR-LVPTCVQSL--IDYSFHQVACGHSM--- 487
Query: 490 AHTFALTESGKLYAFGAGDKGQLG 513
T AL+ SG ++ G+ GQLG
Sbjct: 488 --TIALSTSGHVFTMGSSSNGQLG 509
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 29/336 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H T +G V+++G G+LGHGT + RP+ + +L + A G
Sbjct: 259 QIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFH 318
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLS 267
T ++ +G +Y +G + G P+ V L+ + V+ + G++ +A+ +
Sbjct: 319 TCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTT 378
Query: 268 REGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G+V+TF G LGH P +VE L +++A G + A+
Sbjct: 379 SSGKVFTFGDGTFGALGHGKRETVGYPKEVE------ALSGFRTMKVACGLWHSAAIVES 432
Query: 323 PSGMAV-------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+ +++ Y+ G G +LGHG + P ++ L++ VA G
Sbjct: 433 SNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQ--SLIDYSFHQVACGHSMTIA 490
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ G V T G G LG+ + + V L+ ++ G V++ +VY
Sbjct: 491 LSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEVY 550
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
++G G + LGH + D + P LV +LK
Sbjct: 551 TWGMGANGRLGHGGVEDKK--------KPTLVEALK 578
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS--GQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y +G N+ G LG G+ +W PR + L+GI + + G T
Sbjct: 365 GEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHT 424
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG +G + + V+ P+ VESLK + ++AA G + TA +
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEI 482
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + + P + TL Q+A G+
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVP-TCVATLVEPNFCQVACGHSLTA 541
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + VY++G + G+LG+ + D P +E + N + A GA+H AV+
Sbjct: 542 ALT---TTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNFVEEL-ACGAYHVAVLT 596
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V TWG G G LGHG+ + + P VV+AL D + + G T +
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 153/352 (43%), Gaps = 40/352 (11%)
Query: 178 GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237
G G + + P+ + S + + A G L++ G+V+++G++ G +GV
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD- 344
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVE 293
V+ P+ V+ LKN V A G + + ++ G +Y WG +A LG +E
Sbjct: 345 -VSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWV 401
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
P L G LE I V ++ G + + S +++ G G G LGHG R PR +
Sbjct: 402 PRKLDGPLEGIHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRISVSIPREV 458
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECE 401
E + L+ + A G WH A V + G++ TWG G LGHG++E
Sbjct: 459 ESLK--GLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEAR 516
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
VP V L + VA G T ++ G VY+ G LG N ADG
Sbjct: 517 LVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADG-------- 567
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P V ++ + V+ L Y H LT ++Y +G G G+LG
Sbjct: 568 MLPTRVEG--KLMKNFVE-ELACGAY---HVAVLTSRTEVYTWGKGANGRLG 613
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 150/316 (47%), Gaps = 40/316 (12%)
Query: 232 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP 289
GVQ V P+ +ES + V A G A+++++G V FSWG + RLGH +
Sbjct: 288 GVQMDSFV--PKALESAVLLDVQAIACGRQHAALVTKQGEV--FSWGEELGGRLGHGVD- 342
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
+DV + L+N V +A G + A+ + ++ G LG GS +
Sbjct: 343 SDVSHPKFVDGLKNFNVELVACGEYHSCAVTLS-GDLYIWGGNAYNFGLLGCGSEATQWV 401
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
PR ++ L + V+ G WH AVV G++ T+G G +G LGHG+ S+P+ V++
Sbjct: 402 PRKLDG-PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVES 460
Query: 410 LNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNR 457
L ++ + A G + T V E G ++++G G+ LGH G++
Sbjct: 461 LKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGH-------GDK 513
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
A L P V +L + N Q++ +S+ T ALT +G++Y G+ GQLG
Sbjct: 514 EAR-LVPTCVATLVEPN--FCQVACGHSL-----TAALTTTGQVYTMGSPVYGQLG---- 561
Query: 518 NNQTERGNPERVDIDL 533
N Q + P RV+ L
Sbjct: 562 NPQADGMLPTRVEGKL 577
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S GP H+ VTS G +++FG + G LGHG PR + SL+G+R ++AA G
Sbjct: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVW 474
Query: 208 RTMLISD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
T + + +G+++ +G +G + +LV P V +L Q
Sbjct: 475 HTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLV--PTCVATLVEPNFCQ 532
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G+ TA L+ G+VYT +LG + + + + P + G L V ++A G +
Sbjct: 533 VACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADGMLPTRVEGKLMKNFVEELACGAYH 591
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGA 370
+ L S VY+ G G G+LGHG D P ++E + ++ +V AA
Sbjct: 592 VAVLT---SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAIC 648
Query: 371 WHAAVVGQDGRVCT 384
H V G D +C+
Sbjct: 649 LHKWVSGIDQSMCS 662
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ +S P V D + I +T+ ++ G VY +G C G+S L
Sbjct: 286 YGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILP 345
Query: 447 H 447
H
Sbjct: 346 H 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1044
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 173/395 (43%), Gaps = 42/395 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ GP + + S V+ +G L G T + P + S + + A G
Sbjct: 217 KTFEGPRAACRLDSLKDVFFWGDAFGSILECGDTSKPL-PMLVDSTNMLDVQSIACGETH 275
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+I+ G+VY++G +S G G Q V+ P++V+SL ++ V A G+ T ++
Sbjct: 276 AAIITKQGEVYSWGNESSGR--IGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTV 333
Query: 269 EGRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G + WG +G N PH L L+ I VV+IA G + + S
Sbjct: 334 SGEL--IEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIIT---SSG 388
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 378
+Y+ G G G LGHG P+ +E + ++ VA G WH A + +
Sbjct: 389 QLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVK--CVACGPWHTAAIVEVISDFKSN 446
Query: 379 --DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++ TWG G LGH +++ + +P V +L D I V+ G T +S G V++
Sbjct: 447 SPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFT 506
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G LG N HA+ T V L + +E V IS +S H +T
Sbjct: 507 SGSSMHGQLG---------NPHADGKTVSAVEGLLK-SEFVRHISSGSS-----HVAVVT 551
Query: 497 ESGKLYAFGAGDKGQLGI-ELVNNQTERGNPERVD 530
+GK++ +G G +GQLG+ + +N R P VD
Sbjct: 552 TNGKVFTWGKGKEGQLGLGDFLN----RSTPTLVD 582
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 76/328 (23%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-------------- 193
Q+IA G H+ +T +G VYS+G+ SSG++G+ + RP+ ++S
Sbjct: 267 QSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSK 326
Query: 194 ---------------------------------------LQGIRIIQAAAGAGRTMLISD 214
L GI +++ A G T +I+
Sbjct: 327 HTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITS 386
Query: 215 AGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------- 266
+GQ+Y +G +FG +G QGT T P+ VESLK V A G + TA +
Sbjct: 387 SGQLYTYGDGTFGVLGHGDTQGT---TRPKEVESLKGSRVKCVACGPWHTAAIVEVISDF 443
Query: 267 -SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
S R F+WG+ R LGH + + P + +L + +Q++ G +AL+
Sbjct: 444 KSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLTDYDFIQVSCGTALTVALSV-- 500
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
+G+ V++ G + G+LG+ D K +E LL + V +++G+ H AVV +G+V
Sbjct: 501 TGV-VFTSGSSMHGQLGN-PHADGKTVSAVE--GLLKSEFVRHISSGSSHVAVVTTNGKV 556
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQAL 410
TWG G+ G LG G+ S P +V AL
Sbjct: 557 FTWGKGKEGQLGLGDFLNRSTPTLVDAL 584
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 142/313 (45%), Gaps = 36/313 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-- 210
GP H+ +TS G +Y++G + G LGHG T+ RP+ + SL+G R+ A G T
Sbjct: 377 GPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAI 436
Query: 211 --LISD------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ISD +++ +G G+ + + KL+ P V+SL + +Q + G
Sbjct: 437 VEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLI--PTCVDSLTDYDFIQVSCGTAL 494
Query: 263 TAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T LS G V+T +LG+ H + V + G L++ V I++G ++ +
Sbjct: 495 TVALSVTGVVFTSGSSMHGQLGNPHADGKTVS--AVEGLLKSEFVRHISSGSSHVAVVT- 551
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVV 376
+ V++ G G G+LG G + P L++ + +++ + AA H +
Sbjct: 552 --TNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKVIS 609
Query: 377 GQDGRVCT-----WGWGR--YGCLGHGNEECES-----VPKVVQALNDVKAIHVATGDYT 424
+D VC+ +G+ R + C G+ C S V K A + + V G ++
Sbjct: 610 RKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVAKAALAPDKSRRYRVCDGCFS 669
Query: 425 TFV-VSEDGDVYS 436
+ V + G V S
Sbjct: 670 QLLKVVDSGKVKS 682
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 167/369 (45%), Gaps = 42/369 (11%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
G + G +++FG + + G + W ++G + A G T L+++
Sbjct: 4 GDDSEIPESGAIFTFGKS---RFGDNLPNKFW-------VRGDKAKSVACGDEHTALVTE 53
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
+G+++ FG + +G+ G+ K+ T P V+ LK V A G T V + G +YT
Sbjct: 54 SGRLFTFGVNDWGQ--LGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYT 111
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F D +LG P+ P+ E +AAG + +AL +Y G G
Sbjct: 112 FGANGDGQLGVEDIPSSN--CPVKVECEPRQYKALAAGADHSVALT---DDGELYVWGGG 166
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G D+ P L+ + + + VA G +H A V G V T+G G G LG
Sbjct: 167 SEGQLGLGDIDDKSTPTLLS----TDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLG 222
Query: 395 HGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G + ++V PK V KA VA G T V++E G VY+FG G + LGH
Sbjct: 223 QGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHK----- 275
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N++ TP + +V QI+ + HT +TE G+LY FG G +LG
Sbjct: 276 --NKYFYCETPVWL----NFKHKVTQIAAGEN-----HTALVTEKGQLYTFGDGRHAKLG 324
Query: 514 I--ELVNNQ 520
+ E +NQ
Sbjct: 325 LDHECYSNQ 333
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 144 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
R + ++++A G H+ VT G +++FG N GQLG + RP ++ L+ ++
Sbjct: 34 RGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVV 93
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G T++ +++G +Y FG + G+ + GV+ P VE + AA G
Sbjct: 94 ACGRIHTIVATESGCLYTFGAN--GDGQLGVEDIPSSNCPVKVECEPRQYKALAA-GADH 150
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ L+ +G +Y + G++ +LG D + P L + +N V+ +A GY Y A
Sbjct: 151 SVALTDDGELYVWGGGSEGQLGLGD--IDDKSTPTLLSTDN-KVISVACGY-YHTAFVTD 206
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
V++ G G GGKLG G+ + P+ + + + VA G H V+ + G+
Sbjct: 207 VG--EVFTFGEGDGGKLGQGTDYGKAVAPKKVN----IPEKAKSVACGGSHTVVLTECGK 260
Query: 382 VCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V T+G G G LGH N+ CE+ V K +A G+ T +V+E G +Y+FG
Sbjct: 261 VYTFGEGGNGQLGHKNKYFYCET---PVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGD 317
Query: 440 GESASLG 446
G A LG
Sbjct: 318 GRHAKLG 324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 42/274 (15%)
Query: 142 CC----RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLG-------HGTTEEEWRPR 189
CC + E + +A G H+I T G +Y+FG+N GQLG + + E PR
Sbjct: 80 CCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPR 139
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
++L AAGA ++ ++D G++Y +G S E + G+ ++P L+ +
Sbjct: 140 QYKAL--------AAGADHSVALTDDGELYVWGGGS--EGQLGLGDIDDKSTPTLLST-- 187
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-VEPHPLLGTLENIP--V 306
+ V+ A G + TA ++ G V+TF G+ +LG T+ V P + NIP
Sbjct: 188 DNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKV-----NIPEKA 242
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 365
+A G + + L VY+ G G G+LGH ++ E LN + V
Sbjct: 243 KSVACGGSHTVVLT---ECGKVYTFGEGGNGQLGHKNKY-----FYCETPVWLNFKHKVT 294
Query: 366 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+AAG H A+V + G++ T+G GR+ LG +E
Sbjct: 295 QIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 142 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ 201
C R+ AG HS+A+T G +Y +G S GQLG G +++ P + + ++I
Sbjct: 136 CEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDN--KVIS 193
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIFVVQAAI 258
A G T ++D G+V+ FG+ G+ G K V +P+ V E K++ A
Sbjct: 194 VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAV-APKKVNIPEKAKSV-----AC 247
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G T VL+ G+VYTF G + +LGH + E P+ ++ V QIAAG + A
Sbjct: 248 GGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE-TPVWLNFKH-KVTQIAAGENH-TA 304
Query: 319 LACQPSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
L + + Y+ G G KLG H +++ P+ ++F + V+ G H V+
Sbjct: 305 LVTEKGQL--YTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIV--TQVSCGGCHMIVL 360
Query: 377 G----QDGRV 382
Q+G V
Sbjct: 361 AYPRLQNGEV 370
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQT-----ERGNPERVDI 531
+ HT +TESG+L+ FG D GQLGI+ V T ++ PE+V +
Sbjct: 45 DEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 34/360 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L +D+ K IF +E E Q ++Q C + G A
Sbjct: 17 QATLSSLKMVDV-GKWPIFSLCSEEELQLIRQAC-----------VFGSA---------- 54
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTM 210
+ T ++ G+N G LG G + PR + SL G +I + G+G +
Sbjct: 55 --SNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIV 112
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-YISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + N ++G + N P + G L+N VV IA G + ++A +G VY
Sbjct: 172 EVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQ--MCSMAVVDAG-EVYV 228
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS ++ P + Q +++Q V A G H V+ +G+V WG Y
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRV--ACGYAHTLVLTDEGQVYAWGANSY 286
Query: 391 GCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
G LG GN+ +S P + D + I +T+ ++ G+VY +G C G+S +L H
Sbjct: 287 GQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSVTLPH 346
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ ++ + V AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGIHVQRVACGY-------AHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P + ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPISVE 306
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 177/408 (43%), Gaps = 82/408 (20%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P P+ +L G++I+QAA G
Sbjct: 83 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHC 142
Query: 210 MLISDAGQVYAFGKDS-------FGEAEYGVQGTKLVTSPQLVESLK-----------NI 251
+ + D G YA+G+ + G EYG G + +L+ +
Sbjct: 143 LAVDDNGHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKL 202
Query: 252 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVV 307
V Q A G + VL++EG V+T+ G P D++ P + G LE + V+
Sbjct: 203 KVRQVAAGGTHSVVLTQEGHVWTW--------GQPWPPGDIKQISTPVRVQG-LEKVRVI 253
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
+ A LA G+ +++ G G+LG G HP +E L+L V +A
Sbjct: 254 AVGA----FHNLALTEDGI-LWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSL--VDIA 306
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDYTT 425
AG WH+ + G E S+P + DV+ I Y T
Sbjct: 307 AGGWHSTALTIQG------------------EINSLPCYLFRACFKDVQIIKYQKYTYYT 348
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
VY++G GE LG G+ ++ + P V L E +VQ+S +
Sbjct: 349 M------KVYAWGRGEHGRLGF-------GDDKSSRMVPLKVELL--AGEDIVQVSCGGT 393
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
H+ ALT G+++++G GD G+LG + G P VDIDL
Sbjct: 394 -----HSVALTRDGRMFSYGRGDHGRLGY---GRKLTTGQPMGVDIDL 433
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 99/251 (39%), Gaps = 57/251 (22%)
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G G+LG G ++ +E + VV AG+ ++ + +DGR+ TWGW + G
Sbjct: 50 GSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVV--AGSRNSLAICEDGRLFTWGWNQRG 107
Query: 392 CLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG------------ 438
LGH + ES P V AL +K + A G + V ++G Y++G
Sbjct: 108 TLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGRGTRFPAFSVTG 167
Query: 439 ------CGESASLGHNAIAD--------------------GQGNRHANVLT--------- 463
CGE + G H+ VLT
Sbjct: 168 GNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWG 227
Query: 464 -PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNN 519
P +KQ++ RV + I A H ALTE G L+A+G + GQLG +
Sbjct: 228 QPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TGD 284
Query: 520 QTERGNPERVD 530
R +P RV+
Sbjct: 285 TQPRSHPIRVE 295
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 163/361 (45%), Gaps = 29/361 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H + S VY +GSNSS QL G+ ++ P+ S + I+A G T +I
Sbjct: 356 HGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQQIEA--GQYCTFVIFPD 413
Query: 216 GQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G V+A GK S+G G T+L E L + T L+ +G+VY
Sbjct: 414 GFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGS-DGHTLALTLDGKVY 472
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
++ G+ +LGH P + G L N V IAAGY + A+ +Y+ G
Sbjct: 473 SWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT---EDGELYTWGE 529
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGC 392
G G+LGHG P ++ + VA G+ H V QDG+ V ++G G G
Sbjct: 530 GDYGRLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGK 585
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LGH + PKV++AL + V G + ++ G VY +GCG S
Sbjct: 586 LGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSL--------- 636
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G G+ A TP+L+ +L+ + VV IS+ +S H ALT+ +YA+G GQ
Sbjct: 637 GTGSVDATSATPKLLLALQ--SHSVVDISVGDS-----HCVALTQDNNVYAWGNNSMGQC 689
Query: 513 G 513
G
Sbjct: 690 G 690
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 137/276 (49%), Gaps = 20/276 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTMLISD 214
H++A+T G VYS+G G+LGHG ++ + P+ + G +++ AAG + +++
Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTE 520
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 273
G++Y +G+ +G +G ++ V P V+ + N V Q A G+ T +S++G+ V+
Sbjct: 521 DGELYTWGEGDYGRLGHGDNNSRNV--PVQVKDVAN--VGQVACGSAHTVCVSQDGQTVW 576
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+F G++ +LG H++ N V ++ L+ + + ++ G LAL S VY GC
Sbjct: 577 SFGSGDNGKLG-HSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALT---STGQVYVWGC 632
Query: 334 GLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G LG GS P+L+ Q ++ V ++ G H + QD V WG G
Sbjct: 633 --GPSLGTGSVDATSATPKLLLALQSHSV--VDISVGDSHCVALTQDNNVYAWGNNSMGQ 688
Query: 393 LGHGNEECE---SVPKVVQALNDVKAIHVATGDYTT 425
G G+ C + PK V L+ V ++ G T
Sbjct: 689 CGQGH--CTTPITKPKKVLGLDGVAVHQISAGTSHT 722
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 14/188 (7%)
Query: 149 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H++ V+ G V+SFGS +G+LGH T ++P+ I +LQG+ I + G+
Sbjct: 557 QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQ 616
Query: 208 RTMLISDAGQVYAFG-KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ ++ GQVY +G S G V T +P+L+ +L++ VV ++G+ L
Sbjct: 617 CSLALTSTGQVYVWGCGPSLGTGS--VDATS--ATPKLLLALQSHSVVDISVGDSHCVAL 672
Query: 267 SREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+++ VY +WGN++ GH T P +P +LG L+ + V QI+AG + +A
Sbjct: 673 TQDNNVY--AWGNNSMGQCGQGHCTTP-ITKPKKVLG-LDGVAVHQISAGTSHTVAWTAL 728
Query: 323 PSGMAVYS 330
P V S
Sbjct: 729 PMDRQVVS 736
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 351 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+L +Q+ ++ + ++H + V WG L G+ + VPK+ +
Sbjct: 335 KLADQYAKCTVKSGITGEVSFHGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPKLATSF 394
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
+ I G Y TFV+ DG V++ G G LG + D T L
Sbjct: 395 GSAQQIE--AGQYCTFVIFPDGFVHACGKGSYGRLG---LGDSTNQ-----------TQL 438
Query: 471 KQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 523
K++N + S+++S + HT ALT GK+Y++G GD G+LG N+QT++
Sbjct: 439 KRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKLGHG--NSQTQK 491
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 42/358 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + + G LI+ G+V+ +G+ S G+ + V V+SP++VES
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMD--VSSPKMVES 353
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---ARLG-HHTEPNDVEPHPLLGTLEN 303
L + V A G + T L+ G +Y +WG + A LG + P + G L
Sbjct: 354 LDGVHVKSVACGEYQTCALTDSGELY--AWGENKYGANLGCEERSRSQWLPRRISGPLTG 411
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ ++ +A G + ++ S +++ G G G LGHG+ P+ +E + L ++
Sbjct: 412 VCILNVACGDWHTAIVS---SSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKS 468
Query: 364 VVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V A G+WH A + G G++ TWG G G LGH + E + +P V L +
Sbjct: 469 V--ACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE 526
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ V+ G T ++ G VY+ G LG N HA +V +
Sbjct: 527 LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLG---------NPHAK--DKSIVIVEGK 575
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
+ E V+ +++ Y H ALT SG LY +G G GQLG+ N +R P V+
Sbjct: 576 LKEEFVK-EISSGSY---HVAALTSSGSLYTWGKGTNGQLGL---GNVEDRNFPTLVE 626
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 150/314 (47%), Gaps = 22/314 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ +T +G V+ +G S G+LGH + P+ + SL G+ + A G +T +
Sbjct: 313 GRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCAL 372
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGR 271
+D+G++YA+G++ +G + ++ P+ + L + ++ A G++ TA++S G+
Sbjct: 373 TDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQ 432
Query: 272 VYTFSWGNDARLGHH-----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------ 320
++T+ G+ LGH ++P +VE +L+ + V +A G + A+
Sbjct: 433 LFTYGDGSFGVLGHGNLLSVSQPKEVE------SLKGLLVKSVACGSWHTAAIVDIIVDR 486
Query: 321 --CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
G +++ G G G+LGH + P + Q L+ V+ G +
Sbjct: 487 FKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQ--VSCGRMLTVALTN 544
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G+V T G +G LG+ + + +S+ V L + +++G Y ++ G +Y++G
Sbjct: 545 TGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWG 604
Query: 439 CGESASLGHNAIAD 452
G + LG + D
Sbjct: 605 KGTNGQLGLGNVED 618
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 325 GMAVYSVGCGLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
G+ V ++GC + + G+ + + D P+L+E +L++ ++ G HAA++ + G V
Sbjct: 270 GVEVGNIGC-VDNQFGYHNTKQVDALLPKLLESTVMLDV--TNISLGRKHAALITKRGEV 326
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG G G LGH + S PK+V++L+ V VA G+Y T +++ G++Y++G
Sbjct: 327 FCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWG---E 383
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
G N G R + P ++++ + + + N + HT ++ SG+L+
Sbjct: 384 NKYGANL---GCEERSRSQWLP------RRISGPLTGVCILNVACGDWHTAIVSSSGQLF 434
Query: 503 AFGAGDKGQLG 513
+G G G LG
Sbjct: 435 TYGDGSFGVLG 445
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++A+T+ G VY+ GS+ GQLG+ +++ L+ + + ++G+
Sbjct: 531 QVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYH 590
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ +G +Y +GK + G + G+ + P LVE+L+++ V A G+ TA +
Sbjct: 591 VAALTSSGSLYTWGKGTNG--QLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAI 646
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 161/342 (47%), Gaps = 27/342 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS G+LG G EEE PR + Q + QAA G T+L++ G++Y G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 281
+ G+ + PQ + +L+N V Q + G + L+ G++ FSWG++A
Sbjct: 63 NDHGQLGHDTNNLP-NKRPQFISALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATG 119
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH + ++ ++ VVQI+ G+ + LAL SG +++ G G+LG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT--NSG-ELFAWGANEYGQLGL 176
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G+ T +K P L + +A G H+ V + G + WG +G LG + +
Sbjct: 177 GT-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSR 235
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P ++ L + +++ GD + ++++G V++ G G LGH H N
Sbjct: 236 CYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT--------HGNE 287
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 502
+ P++V L + ++ QI+ HT A S GK+Y
Sbjct: 288 ILPRMVFEL--MGSKITQIACGRK-----HTLAFVPSRGKVY 322
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAG 207
QA G H++ +T G +Y+ G+N GQLGH T RP+ I +L+ + Q + G
Sbjct: 40 QAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLS 99
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ +++ GQ++++G ++ G+ + + +P++++S+ VVQ + G+ L+
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVS-YPAPRMIKSIATKTVVQISCGHSHCLALT 158
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
G + F+WG + +LG T V L+ +L IP+ IA G + + A SG
Sbjct: 159 NSGEL--FAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNH--SFAVSKSG 214
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
A++ G G+LG +P ++ + L ++ ++ G + + Q+G V T
Sbjct: 215 -AIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR--YISCGDDFSVFLTQEGGVFTC 271
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 435
G G +G LGHG E +P++V L K +A G +T V G VY
Sbjct: 272 GLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 13/239 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAGA 206
+Q G HS+A+T+ G ++S+GSN++GQLGH + PR I+S+ ++Q + G
Sbjct: 92 TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++++G+++A+G + +G+ G G K+ T+ LV+SL I + A G + +
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTAT-LVKSLAGIPIAFIACGGNHSFAV 210
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
S+ G + F WG + +LG + + P L TL ++ V I+ G + + L Q
Sbjct: 211 SKSGAI--FGWGKNTFGQLGLNDLDSRCYPTQ-LKTLRSLGVRYISCGDDFSVFLT-QEG 266
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 382
G V++ G G G+LGHG+ +E PR++ F+L+ + +A G H A V G+V
Sbjct: 267 G--VFTCGLGTFGQLGHGTHGNEILPRMV--FELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 24/299 (8%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+Y +G GE G + V +P+ ++ + V QAA G T +L+++G++YT
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LGH T + + LEN V Q++ G + LAL + ++S G G
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119
Query: 338 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
+LGH PR+I+ + V ++ G H + G + WG YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177
Query: 397 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+ VP +V++L + +A G +F VS+ G ++ +G LG N +
Sbjct: 178 T-TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---- 232
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P + +L+ + R + S++ LT+ G ++ G G GQLG
Sbjct: 233 ----DSRCYPTQLKTLRSLGVRYISCGDDFSVF-------LTQEGGVFTCGLGTFGQLG 280
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 385 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG +G LG G E E V P+ + A G T ++++DG +Y+ G +
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH+ + N+ PQ +++L+ N V Q+S S H+ ALT G+L+
Sbjct: 66 GQLGHDT--NNLPNKR-----PQFISALE--NYIVTQVSCGLS-----HSLALTNWGQLF 111
Query: 503 AFGAGDKGQLGIEL 516
++G+ GQLG +L
Sbjct: 112 SWGSNATGQLGHDL 125
>gi|444912858|ref|ZP_21233017.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444716551|gb|ELW57397.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 394
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 171/365 (46%), Gaps = 57/365 (15%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A S G V+++G N++GQLG GTT P I +L + + AAG G ++ + A
Sbjct: 67 HSLARRSDGSVWAWGENTTGQLGDGTTTLRSTPTKIATLSNMERV--AAGHGHSLALR-A 123
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+V+A+GK G + T+P V L ++ + A + LS+ G+V+
Sbjct: 124 GKVWAWGKPDSG---------AIKTAPVEVPGLSDVVAIAAGFSHSL--ALSQSGQVW-- 170
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
SWGND + P VE P + IAAG Y LAL S V++ G
Sbjct: 171 SWGNDNAGHANNTPVQVEGLP--------GIKAIAAGVSYSLALGTDGS---VWAWGDNT 219
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG + + P + + ++ +AAG+ HA + G V TWG +G LG
Sbjct: 220 LGQLGSDTPSSAT-PVKVAELPMITF----IAAGSTHALALDTAGGVWTWGANDHGQLGD 274
Query: 396 GNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + S P+ V L +++A+ A G+ + ++ DV ++G + LG +
Sbjct: 275 GTTSTKRSQPQQVSGLANIQAL--AGGNGHSLALNSANDVMAWGRDSAGQLGDD------ 326
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA---HTFALTESGKLYAFGAGDKGQ 511
SLK + V SLTN+ +A H+ A+ G L+A+G+ + G+
Sbjct: 327 -------------LSLKDQSRPVKTSSLTNATAISAGHSHSLAVLSDGSLFAWGSNENGR 373
Query: 512 LGIEL 516
LG+ L
Sbjct: 374 LGVIL 378
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-AAGAGRTM 210
AG H++A+ + G V+++G+N GQLG GTT + R +P + + G+ IQA A G G ++
Sbjct: 247 AGSTHALALDTAGGVWTWGANDHGQLGDGTTSTK-RSQP-QQVSGLANIQALAGGNGHSL 304
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ A V A+G+DS G+ + K + P SL N + A + AVLS +G
Sbjct: 305 ALNSANDVMAWGRDSAGQLGDDLS-LKDQSRPVKTSSLTNATAISAGHSHSL-AVLS-DG 361
Query: 271 RVYTFSWGNDARLGHHTE-PNDVEPHPL 297
++ + + RLG P++ P PL
Sbjct: 362 SLFAWGSNENGRLGVILPLPSETIPTPL 389
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ + G V+++G N+ GQLG T P++ + I AAG+ +
Sbjct: 198 AGVSYSLALGTDGSVWAWGDNTLGQLGSDTPSSA---TPVKVAELPMITFIAAGSTHALA 254
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ AG V+ +G + G+ G TK + PQ V L NI + A GN + L+
Sbjct: 255 LDTAGGVWTWGANDHGQLGDGTTSTKR-SQPQQVSGLANIQAL--AGGNGHSLALNSAND 311
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V +WG D+ +LG D +L N I+AG+ + LA+ S ++
Sbjct: 312 V--MAWGRDSAGQLGDDLSLKDQSRPVKTSSLTN--ATAISAGHSHSLAVLSDGS---LF 364
Query: 330 SVGCGLGGKLG 340
+ G G+LG
Sbjct: 365 AWGSNENGRLG 375
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A++ G V+S+G++++G + P + L GI+ I AAG ++
Sbjct: 155 AGFSHSLALSQSGQVWSWGNDNAGHANN-------TPVQVEGLPGIKAI--AAGVSYSLA 205
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G ++ G+ T +P V L I + A G+ L G
Sbjct: 206 LGTDGSVWAWGDNTLGQLG---SDTPSSATPVKVAELPMITFIAA--GSTHALALDTAGG 260
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+T+ + +LG T + L NI +A G + LAL S V +
Sbjct: 261 VWTWGANDHGQLGDGTTSTKRSQPQQVSGLANIQA--LAGGNGHSLALN---SANDVMAW 315
Query: 332 GCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG S D+ P ++ L N ++AG H+ V DG + WG
Sbjct: 316 GRDSAGQLGDDLSLKDQSRP--VKTSSLTNA--TAISAGHSHSLAVLSDGSLFAWGSNEN 371
Query: 391 GCLG 394
G LG
Sbjct: 372 GRLG 375
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 38/195 (19%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+V++ G G+LG G+ T P I L N++ VAAG H+ + + G+V WG
Sbjct: 76 SVWAWGENTTGQLGDGTTTLRSTPTKIAT--LSNME--RVAAGHGHSLAL-RAGKVWAWG 130
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G + ++ P V L+DV AI A G + +S+ G V+S+G
Sbjct: 131 KPDSGAI-------KTAPVEVPGLSDVVAI--AAGFSHSLALSQSGQVWSWGN------- 174
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
D G HAN TP V L + +S ++ AL G ++A+G
Sbjct: 175 -----DNAG--HANN-TPVQVEGLPGIKAIAAGVS---------YSLALGTDGSVWAWGD 217
Query: 507 GDKGQLGIELVNNQT 521
GQLG + ++ T
Sbjct: 218 NTLGQLGSDTPSSAT 232
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G H++ + + +V+S G NS GQLG P P+++L+ ++ + G
Sbjct: 27 QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + GV K + +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQPSPQRV-RSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
S G G + P I + NL + ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFT 259
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+G G LG+ + P++V+ ++ + + GD+T V G V SFG G SA+
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSAT 319
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + PR I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+F WG++ A G + + +P + G L+N+ V+ I+ G + L+
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G A V G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313
Query: 387 WGRYGCLG----HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G +E + ++ A L DV+ H+ G Y FV +
Sbjct: 314 RGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 30/318 (9%)
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G ++QAA+G +L+ V++ G++S G+ G +G P+ V++LK +
Sbjct: 22 GAELLQAASGERHALLLLTNSLVHSCGENSRGQ--LGRRGAPRWDLPEPVQALKTLKFDL 79
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 314
+ G + + +GRV+ + G++ +LG E ++ P + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKITTLNGIKIIQVSCGHY 138
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LAL+ V+S G G+LG G + P+ + + + L VAAG H+
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPL--AQVAAGGAHS 193
Query: 374 AVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
+ G WG G L G + + P + AL ++ I+++ GD T V+S+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
DG V++FG S LG++ + +G PQLV ++++ V QI
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERIDGLVSQIDCGGD----- 297
Query: 491 HTFALTE-SGKLYAFGAG 507
HT A +G++ +FG G
Sbjct: 298 HTIAYVHTTGQVVSFGRG 315
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G +L V++ + +LG P P P+ L+ + ++ G
Sbjct: 25 LLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPV-QALKTLKFDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + PR I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGVGELKEINFTPRKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E + P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVQVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L++ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T ++S G+V+ FG +S G+ Y K PQLVE + + G+ A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGLVSQIDCGGDHTIA 301
Query: 265 VLSREGRVYTFSWGNDA 281
+ G+V +F G A
Sbjct: 302 YVHTTGQVVSFGRGPSA 318
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 185/406 (45%), Gaps = 68/406 (16%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---------------------- 185
+Q G HS+A+TS G V+++G N + QLG +E
Sbjct: 176 TQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDE 235
Query: 186 ------------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
RPR +R+L G +I+Q GA ++++S+ G V+A+G ++ G + +
Sbjct: 236 LDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSG--QLCL 293
Query: 234 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND 291
+ K V P LV+ L I + Q A G T L+ G+VY SWGN+ +LG D
Sbjct: 294 RELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVY--SWGNNQFGQLG----VGD 347
Query: 292 VEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
PH + L TLE+ IA G + + L VYS G G G+LGHG+ +E
Sbjct: 348 TAPHTIPSRLKTLEHQFCAHIACGEDHSVVLT---ETGGVYSFGAGGQGQLGHGTLQNEI 404
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHG----NEECESV 403
+PR+I F+L+ V G H V + ++ +G G G LG G ++
Sbjct: 405 NPRMI--FELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLT 462
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P +V+ L+ + +ATG + + G+ G ESA L +A Q ++ VLT
Sbjct: 463 PMLVRVLDATPILRIATGASASHCFAVVGNRNHVGAAESAQLPWDA-RHRQASQSPLVLT 521
Query: 464 PQLVTSL-------KQVN--ERVVQISLTNSIYWNAHTFALTESGK 500
LV L K V+ R +Q++L+++ N +F E G+
Sbjct: 522 LPLVRKLLADAAASKDVSALTRTLQVALSSASCLNG-SFLAHEPGQ 566
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 170/401 (42%), Gaps = 58/401 (14%)
Query: 148 SQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+ AIA G H++ + G VYS GSN GQLGH + +P + +L+ I Q A G
Sbjct: 126 ASAIACGRAHTLFLVD-GQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGE 182
Query: 207 GRTMLISDAGQVYAFGK-------------------------------DSFGEAEYGVQG 235
++ ++ GQV+A+G D E +
Sbjct: 183 THSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLA 242
Query: 236 -TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 294
+T P+LV +L +VQ G F+ VLS G V F+WG++ P
Sbjct: 243 YMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDV--FAWGDNTSGQLCLRELKTVP 300
Query: 295 HP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
P L+ L IP+ Q+AAG + LAL VYS G G+LG G P
Sbjct: 301 VPTLVKELYGIPIRQLAAGGRHTLALTFNGQ---VYSWGNNQFGQLGVGDTAPHTIP--- 354
Query: 354 EQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
+ + L Q +A G H+ V+ + G V ++G G G LGHG + E P+++ L
Sbjct: 355 SRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMG 414
Query: 413 VKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
A V G T V + +Y+FG G + LG + Q +VLTP LV L
Sbjct: 415 KSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQ----QHVLTPMLVRVLD 470
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+++I+ S +H FA+ G GA + QL
Sbjct: 471 ATP--ILRIATGASA---SHCFAVV--GNRNHVGAAESAQL 504
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 155/374 (41%), Gaps = 55/374 (14%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEW----RPRPIRSLQGIRI--IQAAAGAGR--TMLISDA 215
G V+++G+ + GQLG T + P + + + + + +A GR T+ + D
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD- 141
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
GQVY+ G + G+ + +K P+ V++L+ + Q A G + L+ G+V F
Sbjct: 142 GQVYSCGSNDQGQLGHKKHRSK----PERVDALEPYTITQIACGETHSLALTSNGQV--F 195
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+WG++ P++ P T + P A S V +
Sbjct: 196 AWGDNKASQLGLTPSESSRQP--STRSSAPKTAAA-------------SIDDVDELDAAT 240
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+ +R PRL+ L + V + GA + V+ + G V WG G L
Sbjct: 241 LAYMDFMTR-----PRLVRA--LTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCL 293
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
+ VP +V+ L + +A G T ++ +G VYS+G + LG G
Sbjct: 294 RELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLG-------VG 346
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+ + + +L T Q + H+ LTE+G +Y+FGAG +GQLG
Sbjct: 347 DTAPHTIPSRLKTLEHQFCAHIA--------CGEDHSVVLTETGGVYSFGAGGQGQLGHG 398
Query: 516 LVNNQTERGNPERV 529
+ N+ NP +
Sbjct: 399 TLQNEI---NPRMI 409
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 35/156 (22%)
Query: 370 AWHAAVVGQDGRVCTWGWGR--YGCLGH--GNEECESVPK--VVQALNDVKAIHVATG-- 421
A HA + G W WG G LG N+ +VP+ ++A + V +A+
Sbjct: 76 AAHAQLAGS-----VWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIA 130
Query: 422 ---DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+T F+V DG VYS G + LGH +H + P+ V +L+ +
Sbjct: 131 CGRAHTLFLV--DGQVYSCGSNDQGQLGHK--------KHRS--KPERVDALEPYT--IT 176
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
QI+ + H+ ALT +G+++A+G QLG+
Sbjct: 177 QIACGET-----HSLALTSNGQVFAWGDNKASQLGL 207
>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1096
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 36/314 (11%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G VY +G + F + G V +P+L+ES + V G A++SREG+
Sbjct: 56 IESKGDVYIWG-EVFAD---GFPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGK 111
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+T WG ++ RLGH + + +PH L ++ + I A + + + +
Sbjct: 112 VFT--WGEESGGRLGHGIDKDFGKPH--LVEFPDVVTLDIVACGEFHTSAVSKCDNFFTW 167
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G LGHG+ P+ + F L L+ V VA G+WH+A+ +G++ T+G G
Sbjct: 168 GDGTHNVGLLGHGNEISHWIPKSVNGF-LDGLRVVSVACGSWHSALATSNGKLFTFGDGT 226
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGC 439
+G LGHG++E PK VQ L+ +K + VA G + T + E ++++G
Sbjct: 227 FGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGD 286
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH GN+ L P V+ L + N QI+ +++ T ALT SG
Sbjct: 287 GDKFRLGH-------GNKDM-YLKPTRVSPLIEYN--FQQIACGHTM-----TVALTTSG 331
Query: 500 KLYAFGAGDKGQLG 513
++ G+ + GQLG
Sbjct: 332 HVFTMGSTENGQLG 345
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 167/369 (45%), Gaps = 42/369 (11%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
+ SKG VY +G + G + + PR + S + + +G ++S G+V+
Sbjct: 56 IESKGDVYIWGEVFAD--GFPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVF 113
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG- 278
+G++S G +G+ K P LVE + + A G F T+ +S+ +T WG
Sbjct: 114 TWGEESGGRLGHGID--KDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFT--WGD 169
Query: 279 ---NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
N LGH E + P + G L+ + VV +A G + ALA S +++ G G
Sbjct: 170 GTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACG-SWHSALAT--SNGKLFTFGDGT 226
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA----VVGQDG------RVCT 384
G LGHG + +P+ + QLL+ L+ V VA G WH A V Q G ++ T
Sbjct: 227 FGVLGHGDQESVMYPK---EVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSWKLFT 283
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LGHGN++ P V L + +A G T ++ G V++ G E+
Sbjct: 284 WGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQ 343
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
L GN +A P LV K + E + +IS H A+T +LY +
Sbjct: 344 L---------GNPNAAGKVPTLVQD-KLLGEFIEEISCGAH-----HVAAVTSRSELYTW 388
Query: 505 GAGDKGQLG 513
G G G+LG
Sbjct: 389 GKGSNGRLG 397
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AV+ +++G +++ G LGHG W P+ + L G+R++ A G+ +
Sbjct: 151 GEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHS 210
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
L + G+++ FG +FG +G Q + V P+ V+ L + V+ A G + TA +
Sbjct: 211 ALATSNGKLFTFGDGTFGVLGHGDQES--VMYPKEVQLLSGLKTVKVACGVWHTAAIIEV 268
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ +++T+ G+ RLGH + ++P + +E QIA G+ +AL
Sbjct: 269 AFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIE-YNFQQIACGHTMTVAL 327
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+++G G+LG+ + K P L+ Q +LL ++ GA H A V
Sbjct: 328 TT--SGH-VFTMGSTENGQLGNPNAAG-KVPTLV-QDKLLGEFIEEISCGAHHVAAVTSR 382
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFG 438
+ TWG G G LGHG+ + P +V AL D +++ G ++T+ V ++ Y G
Sbjct: 383 SELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSNFTSCVCNQK---YVSG 439
Query: 439 CGESASLG 446
+S G
Sbjct: 440 TDQSVCFG 447
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
N Q IA G ++A+T+ G V++ GS +GQLG+ + L G I + + G
Sbjct: 313 NFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCG 372
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
A ++ ++Y +GK S G +G T SP LV +LK+ + + G+ FT+
Sbjct: 373 AHHVAAVTSRSELYTWGKGSNGRLGHG--DTDDRKSPTLVLALKDRHLKNISCGSNFTSC 430
Query: 266 LSREGRV 272
+ + V
Sbjct: 431 VCNQKYV 437
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G H++ + + +V+S G NS GQLG P P+++L+ ++ + G
Sbjct: 27 QAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + GV K + +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQPSPQRV-RSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
S G G + P I + NL + ++ G H AV+ QDG+V T
Sbjct: 202 SFGWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFT 259
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+G G LG+ + P++V+ ++ + + GD+T V G V SFG G SA+
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSAT 319
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + PR I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+F WG++ A G + + +P + G L+N+ V+ I+ G + L+
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G A V G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313
Query: 387 WGRYGCLG----HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G +E + ++ A L DV+ H+ G Y FV +
Sbjct: 314 RGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 30/318 (9%)
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G ++QAA+G +L+ V++ G++S G+ G +G P+ V++LK +
Sbjct: 22 GAELLQAASGERHALLLLTNSLVHSCGENSRGQ--LGRRGAPRWDLPEPVQALKTLKFDL 79
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 314
+ G + + +GRV+ + G++ +LG E ++ P + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGV-GELKEINFTPRKITTLNGIKIIQVSCGHY 138
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LAL+ V+S G G+LG G + P+ + + + L VAAG H+
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPL--AQVAAGGAHS 193
Query: 374 AVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
+ G WG G L G + + P + AL ++ I+++ GD T V+S+
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQ 253
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
DG V++FG S LG++ + +G PQLV ++++ V QI
Sbjct: 254 DGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERIDGLVSQIDCGGD----- 297
Query: 491 HTFALTE-SGKLYAFGAG 507
HT A +G++ +FG G
Sbjct: 298 HTIAYVHTTGQVVSFGRG 315
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G +L V++ + +LG P P P+ L+ + ++ G
Sbjct: 25 LLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPV-QALKTLKFDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + PR I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGVGELKEINFTPRKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E + P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVQVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L++ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T ++S G+V+ FG +S G+ Y K PQLVE + + G+ A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGLVSQIDCGGDHTIA 301
Query: 265 VLSREGRVYTFSWGNDA 281
+ G+V +F G A
Sbjct: 302 YVHTTGQVVSFGRGPSA 318
>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 156/341 (45%), Gaps = 37/341 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + Q A G ++ G+++ +G++S G +G+ K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVES 329
Query: 248 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 304
L V A G F T ++ G +YT+ G N LGH ++ + P + G LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGL 389
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V + G + + S +++ G G G LGHG R ++PR +E L L+ +
Sbjct: 390 HVASVTCGPWHTALIT---SYGRLFTFGDGTFGVLGHGDRETVQYPREVES--LSGLRTI 444
Query: 365 VVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V+ G WH A V + G++ TWG G LGHG+++ P V AL D
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+A G T ++ G V++ G LG N DG+ P LV K
Sbjct: 505 YNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KL 554
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+E V +IS Y H ALT ++Y +G G G+LG
Sbjct: 555 ASEFVEEISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 24/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G +++ G LGHG+ W P+ I L+G+ + G T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 267 ---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+++T+ G+ RLGH + ++P + L + +IA G+ +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPALIDYNFHKIACGHSLTV 518
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L SG V+++G + G+LG+ +TD K P L+E +L + ++ GA+H A +
Sbjct: 519 GLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASEFVEEISCGAYHVAALT 573
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAI 624
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 131/289 (45%), Gaps = 33/289 (11%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
V P+ +ES + V Q A G A ++R+G ++T+ + RLGH + P +
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVE 328
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 356
V +A G + A+ +Y+ G G G LGHGS P+ I
Sbjct: 329 SLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGC 385
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L L V G WH A++ GR+ T+G G +G LGHG+ E P+ V++L+ ++ I
Sbjct: 386 -LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRTI 444
Query: 417 HVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V+ G + T V E G ++++G G+ LGH G++ L P
Sbjct: 445 AVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-LKP 496
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +L N +I+ +S+ T LT SG+++ G+ GQLG
Sbjct: 497 TCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 146/349 (41%), Gaps = 38/349 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AAAGAG 207
Q G H+ VT +G ++++G S G+LGHG ++ + PR + SL + A G
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEF 344
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAV 265
T ++ AG++Y +G + G G+ + ++ L+ + V G + TA+
Sbjct: 345 HTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGCLEGLHVASVTCGPWHTAL 403
Query: 266 LSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
++ GR++TF G LGH P +VE +L + + ++ G + A+
Sbjct: 404 ITSYGRLFTFGDGTFGVLGHGDRETVQYPREVE------SLSGLRTIAVSCGVWHTAAVV 457
Query: 321 ---------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
S +++ G G +LGHG + P + N +
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACG---- 513
Query: 372 HAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H+ VG G+V T G YG LG+ + + V L ++ G Y ++
Sbjct: 514 HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALT 573
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+VY++G G + LGH + D + P LV +LK + + +
Sbjct: 574 SRNEVYTWGKGANGRLGHGDLEDRK--------VPTLVEALKDRHVKYI 614
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 167/352 (47%), Gaps = 28/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++ +GS G+LG G E+E + PR + ++ + Q A G T+ I+ G+VY+ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ +G+ + +L QL+ L + A GN T ++ G+++++ + +L
Sbjct: 61 NDYGQLGHEKARKRL----QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G ++ ++ L +VQIA G + +AL + +Y+ G G+LG GS
Sbjct: 117 GLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT---NDGELYAWGSNREGQLGLGS 173
Query: 344 -RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
T E P+ I L + +A G +H V+ + G V +WG +G LG + + +
Sbjct: 174 YTTTEIKPKRIST--LAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+P ++ L + K + G+ + ++ DG V++ G G LGH GN +L
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGH-------GNTTNEIL 284
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 513
Q+ ++ + V QIS HT AL S G++YA+G G GQLG
Sbjct: 285 PRQV---MELMGSTVTQISCGKR-----HTLALVPSRGRVYAWGLGGAGQLG 328
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 6/206 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HSIA+T+ G +Y++GSN GQLG G+ T E +P+ I +L + I A G
Sbjct: 141 QIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGY 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T++IS +G V+++G+++FG+ G+ + P + +L+N V A G F+ L+
Sbjct: 201 HTIVISKSGAVFSWGRNTFGQL--GLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G V+T G +LGH N++ P ++ L V QI+ G + LAL PS
Sbjct: 259 MDGGVFTCGAGMYGQLGHGNTTNEILPRQVM-ELMGSTVTQISCGKRHTLALV--PSRGR 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLI 353
VY+ G G G+LG+ + P+++
Sbjct: 316 VYAWGLGGAGQLGNRASQSATTPQVV 341
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 19/307 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G +++A+T +G VYS G+N GQLGH + R + I L + A G
Sbjct: 38 QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARK--RLQLIPGLDAFVFRKIACGNCH 95
Query: 209 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ +++ GQ++++G + G+ V T+ V P++++ L +VQ A G + L+
Sbjct: 96 TLAVNEWGQLFSWGCNMNGQLGLNSVDCTERV--PRMIKVLGTNVIVQIACGTEHSIALT 153
Query: 268 REGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+G +Y +WG++ LG +T +++P + TL +P+ IA G + + ++
Sbjct: 154 NDGELY--AWGSNREGQLGLGSYT-TTEIKPKR-ISTLAAVPIAFIACGGYHTIVIS--K 207
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
SG AV+S G G+LG P + L N + G + + DG V
Sbjct: 208 SG-AVFSWGRNTFGQLGLNDVQQRNLPCQLR--TLRNAKVCYATCGEEFSVFLTMDGGVF 264
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 442
T G G YG LGHGN E +P+ V L ++ G +T +V G VY++G G +
Sbjct: 265 TCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Query: 443 ASLGHNA 449
LG+ A
Sbjct: 325 GQLGNRA 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++ G + G+LG G DE PR ++ + N++ + A G + + ++G+V +
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQI--ACGENYTVAITKEGKVYSC 58
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LGH E+ +++ L+ +A G+ T V+E G ++S+GC + L
Sbjct: 59 GNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G N++ + P+++ L +VQI+ H+ ALT G+LYA+G
Sbjct: 117 GLNSVDCTER-------VPRMIKVLG--TNVIVQIACGTE-----HSIALTNDGELYAWG 162
Query: 506 AGDKGQLGIELVNNQTERGNPERV 529
+ +GQLG L + T P+R+
Sbjct: 163 SNREGQLG--LGSYTTTEIKPKRI 184
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 30/257 (11%)
Query: 275 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
F WG+ LG + N P + +E V QIA G Y +A+ + VYS
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFMPREV-DFIEASNVEQIACGENYTVAITKEGK---VYS 57
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LGH K +LI + + A G H V + G++ +WG
Sbjct: 58 CGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKI--ACGNCHTLAVNEWGQLFSWGCNMN 113
Query: 391 GCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG + +C E VP++++ L + +A G + ++ DG++Y++G LG
Sbjct: 114 GQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLG--- 170
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
G+ + P+ +++L V + HT +++SG ++++G
Sbjct: 171 ----LGSYTTTEIKPKRISTLAAVPIAFIACG-------GYHTIVISKSGAVFSWGRNTF 219
Query: 510 GQLGIELVNNQTERGNP 526
GQLG+ N+ +R P
Sbjct: 220 GQLGL---NDVQQRNLP 233
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+I ++ G V+S+G N+ GQLG ++ P +R+L+ ++ A G ++ +
Sbjct: 198 GGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFL 257
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ V L V Q + G T A++ GR
Sbjct: 258 TMDGGVFTCGAGMYGQLGHGNTTNEIL--PRQVMELMGSTVTQISCGKRHTLALVPSRGR 315
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLL 298
VY + G +LG+ + P +L
Sbjct: 316 VYAWGLGGAGQLGNRASQSATTPQVVL 342
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 156/301 (51%), Gaps = 14/301 (4%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E QA +G HS+ + S G ++S+G NS GQLG + + +P+ I +L+ +R+ + G
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCG 83
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ + G+V+A+G S G+ G + ++ P+ +++L +I ++Q + G+ +
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGIG-EFNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142
Query: 266 LSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
LS +GR++T+ + +LG E P+ P + L+ IP+ Q+AAG + AL+ S
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECPSQASPQR-VQFLDGIPLTQVAAGGAHSFALSL--S 199
Query: 325 GMAVYSVGCGLGGKLGHGSR----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
G A + G G+L + P ++ + NL V ++ G H AV+ Q G
Sbjct: 200 G-ASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALE--NLGVVYISCGYEHTAVLTQTG 256
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGC 439
+V T+G YG LG+ + P++V+ ++ + + + G Y T V G V SFG
Sbjct: 257 KVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFGR 315
Query: 440 G 440
G
Sbjct: 316 G 316
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 159/333 (47%), Gaps = 37/333 (11%)
Query: 187 RPRPIRSLQ----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 242
RP P+R G + QAA+G ++L+ G+++++G +S G+ G + + P
Sbjct: 9 RPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQP 66
Query: 243 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTL 301
+ + +L+ + V + G + + +GRV+ + G++ +LG E N++ P + TL
Sbjct: 67 KRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGI-GEFNEINLIPRKIKTL 125
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLN 360
+I ++Q++ G+ + LAL+ +++ G G+LG G + P+ + Q L+
Sbjct: 126 TDIKIIQVSCGHHHSLALS---EDGRLFTWGSNSHGQLGLGKECPSQASPQRV---QFLD 179
Query: 361 LQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC----ESVPKVVQALNDVKA 415
P+ VAAG H+ + G WG G L + S P V AL ++
Sbjct: 180 GIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGV 239
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
++++ G T V+++ G V++FG LG++ A +G PQLV ++
Sbjct: 240 VYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEG--------PQLVEG---IDG 288
Query: 476 RVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
V QI + HT A + +GK+ +FG G
Sbjct: 289 LVSQIDCG-----SYHTLAYVYTTGKVVSFGRG 316
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
++S G G+LG ++ P+ I + L + +V+ G H+ V GRV WG
Sbjct: 44 LHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVD--LVSCGKEHSLAVCYKGRVFAWGA 101
Query: 388 GRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LG G E +P+ ++ L D+K I V+ G + + +SEDG ++++G LG
Sbjct: 102 GSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLG 161
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
Q +PQ V L I LT AH+FAL+ SG + +G+
Sbjct: 162 LGKECPSQA-------SPQRVQFLD-------GIPLTQVAAGGAHSFALSLSGASFGWGS 207
Query: 507 GDKGQLGIELVN 518
+GQL + N
Sbjct: 208 NSEGQLALRKKN 219
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 29/266 (10%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
QAA G + +L G ++++ + +LG +P + LE + V ++ G
Sbjct: 27 QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRI-PALETLRVDLVSCGKE 85
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LA+ + V++ G G G+LG G + PR I+ L +++ + V+ G H+
Sbjct: 86 HSLAVCYKGR---VFAWGAGSEGQLGIGEFNEINLIPRKIKT--LTDIKIIQVSCGHHHS 140
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ +DGR+ TWG +G LG G E ++ P+ VQ L+ + VA G +F +S G
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSG 200
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANV-----LTPQLVTSLKQVNERVVQISLTNSIY 487
SFG G S S G A+ R NV P V +L+ + VV IS
Sbjct: 201 A--SFGWG-SNSEGQLAL------RKKNVPVVQSSKPCSVDALENLG--VVYISCGYE-- 247
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLG 513
HT LT++GK++ FG GQLG
Sbjct: 248 ---HTAVLTQTGKVFTFGGNSYGQLG 270
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 160/342 (46%), Gaps = 41/342 (11%)
Query: 188 PRPIRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
P I SL + + + A G L++ G+V+ +G++S G +G+ + P LVE
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVE 311
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 302
L V A G + T +S G ++T WG N LGH TE + P + G LE
Sbjct: 312 FLAVNNVDFVACGEYHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLE 369
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 361
+ V+ +A G + ALA S +++ G G G LGHG R +PR + Q+L+ L
Sbjct: 370 GLQVLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGL 423
Query: 362 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
+ + VA G WH A V+ Q G ++ TWG G LGHG++E +P V AL
Sbjct: 424 KTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALI 483
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
D +A G T ++ G V++ G LG N ++DG+ P LV K
Sbjct: 484 DYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGR--------LPCLVQD-K 533
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V E V +IS H LT +++ +G G G+LG
Sbjct: 534 LVGEFVEEISCG-----AYHVAVLTSRSEVFTWGRGANGRLG 570
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 29/290 (10%)
Query: 242 PQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
P +ESL +++V + A G A+++R+G V+T+ + RLGH + + PH L+
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH-LVEF 312
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L V +A G + A++ + + G G LGHG+ P+ + L
Sbjct: 313 LAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG-PLEG 370
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
LQ + VA G WH+A+ +G++ T+G G +G LGHG+ E P+ VQ L+ +K I VA
Sbjct: 371 LQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVAC 430
Query: 421 GDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
G + T V+S+ G ++++G G+ LGH + L P V++L
Sbjct: 431 GVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGS--------KETYLLPTCVSAL 482
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
N Q++ +++ T ALT SG ++ G GQLG L + +
Sbjct: 483 IDYN--FHQLACGHTM-----TVALTTSGHVFTMGGTAYGQLGNPLSDGR 525
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 145/340 (42%), Gaps = 31/340 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H VT +G V+++G S G+LGHG + RP + L + A G T +
Sbjct: 272 GVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAV 331
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVES-LKNIFVVQAAIGNFFTAVLSREG 270
S +G ++ +G + G GT++ P+ V L+ + V+ A G + +A+ + G
Sbjct: 332 STSGDLFTWGDGTHNAGLLG-HGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNG 390
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLAL-------ACQ 322
+++TF G LGH + P+P + L + +++A G + A+
Sbjct: 391 KLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTN 448
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S +++ G G +LGHGS+ P + N +A G + G V
Sbjct: 449 ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQ--LACGHTMTVALTTSGHV 506
Query: 383 CTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
T G YG LG+ G C K+V + ++ G Y V++ +V+++G
Sbjct: 507 FTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVE----EISCGAYHVAVLTSRSEVFTWG 562
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
G + LGH D + +P V +LK N + +
Sbjct: 563 RGANGRLGHGDTEDRR--------SPTFVEALKDRNVKSI 594
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS TS G +++FG + G LGHG E PR ++ L G++ I+ A G T I
Sbjct: 379 GTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAI 438
Query: 213 ----SDAG------QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
S +G +++ +G +G + T L+ P V +L + Q A G+
Sbjct: 439 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL--PTCVSALIDYNFHQLACGHTM 496
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T +LG+ + P + L V +I+ G ++ L
Sbjct: 497 TVALTTSGHVFTMGGTAYGQLGNPLSDGRL-PCLVQDKLVGEFVEEISCGAYHVAVLT-- 553
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAWHAAVVG 377
S V++ G G G+LGHG D + P +E + N++ + A+ H V G
Sbjct: 554 -SRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSG 612
Query: 378 QDGRVCT 384
D VC+
Sbjct: 613 ADQSVCS 619
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 219
T V+ G N SG LG G + PR + SL G +I + G+G +L ++ G+VY
Sbjct: 38 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 97
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G +++ + G V Q+ +L N V++ A G+ + VL+ +G VYT+ + N
Sbjct: 98 TWGHNAYSQLGNGTTNHGFVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNN 156
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
++G + N P + L+N VV IA G + ++A +G VY G G+L
Sbjct: 157 SGQVGSGSTANQPIPRRVTSCLQNKIVVNIACG--QMCSMAVVENG-EVYVWGYNGNGQL 213
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG GN+
Sbjct: 214 GLGSSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKS 271
Query: 400 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
+S P V D V I +T+ ++ G VY +G C G+S + H
Sbjct: 272 NQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPH 322
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T +G VY++G N+ QLG+GTT + P + + L ++I+ A G+ +M
Sbjct: 83 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSM 141
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 142 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIVVNIACGQMCSMAVVEN 199
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + +
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---I 254
Query: 329 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
Y+ G G+LG G+++++ +P ++++ +++ + A +A Q G+V WG
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIE---IAACHSAHTSAAKTQSGQVYMWG 311
Query: 387 WGR 389
R
Sbjct: 312 QCR 314
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 207
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 132 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQM 191
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + + G+VY +G + G+ G G + +P + +L+ I V + A G T VL+
Sbjct: 192 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLT 249
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
EG++Y + + +LG + N + +P ++ V++IAA
Sbjct: 250 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVVVDKDRVIEIAA 291
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P + L+N + + VA G+ H+ V+ DG V TWG+
Sbjct: 96 VYTWGHNAYSQLGNGTTNHGFVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 154
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + +++A G + V E+G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQIYAWGA 259
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V +D
Sbjct: 260 NSYGQLG---TGNKSNQSYPTTVVVD 282
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E+ +L+ Q V + ++ V G GCLG G+ + P+ + +L
Sbjct: 16 EEIKLIR-QACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGK 74
Query: 414 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 471
K ++ G V+ +E+G+VY++ GHNA + G G + + Q+ T+L
Sbjct: 75 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGFVPCQVSTNL- 125
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
VN++V++++ + H+ LT G++Y +G + GQ+G NQ
Sbjct: 126 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 168
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 170/379 (44%), Gaps = 38/379 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++GSN GQLG G ++ P + L G+ + AAG ++
Sbjct: 156 AGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGV--VALAAGFDFSLA 213
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G +L +P V L+ + V A + + L +G
Sbjct: 214 VRSDGTVWAWGANGSGQLGDGTYIQRL--APTQVSQLQGVSAVTAGL--YHALALRSDGT 269
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + ++G T + P + V AG LL V++
Sbjct: 270 VWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLL------DDGGVFAW 323
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ D P + + +AAG HA V+ DG + TWG G G
Sbjct: 324 GLNSQGQLGIGTTADSPLPVRVRGLGAVT----SLAAGTQHAVVLRADGTLWTWGHGATG 379
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGHG+ E P+VV L++V + VA+G + + DG V+++G + LG
Sbjct: 380 QLGHGSSERMLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTT 437
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ RH V P L VV +S + H+FAL G ++ +G +GQ
Sbjct: 438 E----RHLPVRVPGL--------SGVVSVSASGH-----HSFALRSDGTVWGWGRNAQGQ 480
Query: 512 LGIELVNNQTERGNPERVD 530
+G +R +P RV+
Sbjct: 481 MGD---GTTKDRASPARVE 496
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 170/368 (46%), Gaps = 39/368 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S AG H++A+ S G V+++GSNSSGQ+G GT + RP P++ R AA
Sbjct: 252 SAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD--RPSPVQVTSIARAKAVAAQDA 309
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++++ D G V+A+G +S G+ G SP V V A G VL
Sbjct: 310 GSLVLLDDGGVFAWGLNSQGQLGIGTT----ADSPLPVRVRGLGAVTSLAAGTQHAVVLR 365
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G ++T+ G +LGH + + P ++ L N V +A+G + +A S
Sbjct: 366 ADGTLWTWGHGATGQLGHGSSERMLSPE-VVTRLSN--VASVASGSFHSVAALSDGS--- 419
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G G+LG G+ T+ P + + V V+A H+ + DG V WGW
Sbjct: 420 VWTWGRNTNGQLGDGTTTERHLPVRVPGLSGV----VSVSASGHHSFALRSDGTV--WGW 473
Query: 388 GR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
GR G +G G + + P V+ L+ VKA+ A+G + DG V+++G + L
Sbjct: 474 GRNAQGQMGDGTTKDRASPARVEGLSSVKAL--ASGGSHMVALRTDGTVWTWGYNGAGQL 531
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G D R A P VT L V S+ Y + AL G ++A+G
Sbjct: 532 GDGTTTD----RRA----PVQVTGLSGVT------SVAAGAY---FSLALRTDGTVWAWG 574
Query: 506 AGDKGQLG 513
G +GQLG
Sbjct: 575 DGFEGQLG 582
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 178/421 (42%), Gaps = 86/421 (20%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G +S+AV G V+S+G+N SGQLG GT P+P++ L ++ + AGA + +
Sbjct: 957 GQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLADVKAV--TAGAHHVVAV 1014
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+ +G ++FG+ G + P VE L N V+ + G + L + R
Sbjct: 1015 RHDGTVWGWGANAFGQVGDGTHFWRF--RPVRVEGLLN--AVETSAGEQHSLALLGDERA 1070
Query: 273 YTFSWGN-------DARLGHHTEPNDVE-------------------PHPLL-------- 298
SWG+ DA G EP V+ LL
Sbjct: 1071 --LSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTW 1128
Query: 299 ----------GTLENIPVVQIAAGYCYLLA--------LACQPSGMAVYSVGCGLGGKLG 340
GT E+ AG ++A LA + G V++ G G+LG
Sbjct: 1129 GGNADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGT-VWAWGDNTFGQLG 1187
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
GS T P Q++ L+ V +AAG++H+ V +DG V WG+ +G LG G +
Sbjct: 1188 DGSNTRRTLP-----VQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMD 1242
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+VP + L+ A+ VA G+Y + ++ DG +++ G LG
Sbjct: 1243 ARAVPTRMLGLD--GAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTF--------T 1292
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
N L+P V L QV R V+ H+ AL E G ++ +G +GQLG V
Sbjct: 1293 NRLSPFQVVELDQV--RTVRAG-------GYHSVALREDGTVWTWGHNGQGQLGDGTVTT 1343
Query: 520 Q 520
+
Sbjct: 1344 R 1344
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 164/372 (44%), Gaps = 44/372 (11%)
Query: 147 NSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIR-IIQAAA 204
S+ AG HS+ VT G V+++G N SGQLG G+ + R + + + G+ + AA
Sbjct: 50 TSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQ---RVVAQQVPGLTDVTSIAA 106
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ + V+ +G ++ G+ G + +PQ V L ++ V A G F +
Sbjct: 107 GDAHSLALRADRTVWTWGGNNAGQVGDGTNVDR--PTPQKVPGLSDVVAV--AAGEFHSL 162
Query: 265 VLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
L +G V+ +WG++ +LG H++P P ++G VV +AAG+ + LA+
Sbjct: 163 ALRADGTVW--AWGSNFYGQLGRGHSQPGP-SPAQVVGL---TGVVALAAGFDFSLAVRS 216
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+ V++ G G+LG G+ P + Q Q ++ V AG +HA + DG
Sbjct: 217 DGT---VWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVS----AVTAGLYHALALRSDGT 269
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G +G G P VQ + +A VA D + V+ +DG V+++G
Sbjct: 270 VWAWGSNSSGQMGDGT--WTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNS 327
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LG AD P V L V H L G L
Sbjct: 328 QGQLGIGTTADSP--------LPVRVRGLGAVTSLAAGTQ---------HAVVLRADGTL 370
Query: 502 YAFGAGDKGQLG 513
+ +G G GQLG
Sbjct: 371 WTWGHGATGQLG 382
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 161/380 (42%), Gaps = 37/380 (9%)
Query: 136 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 195
+LA C R S AG HS+ + G V+S+G NS GQLG G P + L
Sbjct: 793 VLARNLPCARAAS---AGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLW 849
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G ++ AG +M++ G V+ +G + G+ G G + SP V+ L I
Sbjct: 850 G--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDR--ASPLEVKGLAGI--AT 903
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
+G V+S++G V+ +WG + R LG T + P + G + ++ G
Sbjct: 904 GVMGEAHALVVSQDGTVW--AWGANGRGQLGDGTTTSSASPVRVAGL---SAAMNVSVGQ 958
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y +LA P G V+S G G+LG G+ P+ ++ + V AGA H
Sbjct: 959 AY--SLAVLPDGT-VWSWGANDSGQLGDGTNVARTTPKPVQDLADVK----AVTAGAHHV 1011
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
V DG V WG +G +G G P V+ L + A+ + G+ + + D
Sbjct: 1012 VAVRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGL--LNAVETSAGEQHSLALLGDER 1069
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
S+G E LG L P +K + +V+ +++ S W+ H
Sbjct: 1070 ALSWGSHEYGQLGD--------AESGPSLEP---VGVKLPSSKVLVPAVSVSA-WHQHAA 1117
Query: 494 ALTESGKLYAFGAGDKGQLG 513
AL G + +G GQLG
Sbjct: 1118 ALLADGTVQTWGGNADGQLG 1137
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 162/368 (44%), Gaps = 41/368 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR-TMLISD 214
H+ A+ + G V ++G N+ GQLG GTTE R PI ++ G+ + A A A R T+ +
Sbjct: 1115 HAAALLADGTVQTWGGNADGQLGDGTTES--RATPI-TVAGLGAMVAVAPAARHTLALRS 1171
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G V+A+G ++FG+ G + T P V L+ + + A G++ + + +G V+
Sbjct: 1172 DGTVWAWGDNTFGQLGDGSNTRR--TLPVQVVGLEKVTAI--AAGSYHSLAVREDGTVWA 1227
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + +LG T P +LG L+ V +A G + L L + +++ G
Sbjct: 1228 WGYNVFGQLGDGTMDARAVPTRMLG-LDG--AVAVAGGEYHSLMLRFDGT---LWATGNN 1281
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG G+ T+ P FQ++ L V V AG +H+ + +DG V TWG G L
Sbjct: 1282 SHGQLGEGTFTNRLSP-----FQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQL 1336
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G VP V L + + V G TF V + +++G LG +D
Sbjct: 1337 GDGTVTTRRVPAPVPGLTAIAS--VGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDSSD- 1391
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L P LV L V + + A G ++G G LG
Sbjct: 1392 -------RLEPTLVKGLHGVKSVLAGGDF---------SVAQGADGSAMSWGTNVHGTLG 1435
Query: 514 IELVNNQT 521
I L +T
Sbjct: 1436 IGLPGQRT 1443
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 157/368 (42%), Gaps = 39/368 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S + G HS+A+ G + ++G N+ GQ G G + L GI+++ A+
Sbjct: 652 SSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGAS--YL 709
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ + + G + +G + FG+ G G + P V L + A G + ++
Sbjct: 710 HVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--PVQVRGLGQGRRLSA--GRAHSLLVR 765
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGM 326
+G V + +LG + + P+L N+P + A AG + L LAC +
Sbjct: 766 ADGTVLAWGQNTSGQLGDGSTTH--RASPVL--ARNLPCARAASAGRQHSLVLACDGT-- 819
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+S G G+LG G T +P +E + V V AG + V+ DG V TWG
Sbjct: 820 -VWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGV----VAVLAGGDSSMVLRADGTVWTWG 874
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G + P V+ L + G+ VVS+DG V+++G LG
Sbjct: 875 ANGSGQLGDGTLGDRASPLEVKGLAGIAT--GVMGEAHALVVSQDGTVWAWGANGRGQLG 932
Query: 447 HNAIADGQGNRHANVLTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
DG A +P V L +N V Q A++ A+ G ++++G
Sbjct: 933 -----DGTTTSSA---SPVRVAGLSAAMNVSVGQ----------AYSLAVLPDGTVWSWG 974
Query: 506 AGDKGQLG 513
A D GQLG
Sbjct: 975 ANDSGQLG 982
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 46/383 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H +A+ + G V+++G N +GQLG GTT + P + L G+ + AAGA ++
Sbjct: 506 SGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV--AAGAYFSLA 563
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G D F E + G SP V L VV+ A G + +G
Sbjct: 564 LRTDGTVWAWG-DGF-EGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGT 619
Query: 272 VYTFSWGNDARLGHHTEPND---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+ + + ++G + + V+ + L G V + G + +ALA + +
Sbjct: 620 VWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG------VSSVVGGLYHSMALAQDGT---L 670
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGW 387
+ G G+ G G T PR++ + L + ++ A H V +DG + TWG+
Sbjct: 671 RAWGGNAYGQFGDGGVT----PRVVAG-AVPGLSGIKLLGASYLHVLAVREDGMLLTWGY 725
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
R+G LG G S+P V+ L + ++ G + +V DG V ++G S LG
Sbjct: 726 NRFGQLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSLLVRADGTVLAWGQNTSGQLGD 783
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ +R + VL L + R H+ L G ++++G
Sbjct: 784 GSTT----HRASPVLARNLPCARAASAGR-------------QHSLVLACDGTVWSWGGN 826
Query: 508 DKGQLGIELVNNQTERGNPERVD 530
+GQLG V T R P +V+
Sbjct: 827 SQGQLGDGGV---TSRAYPAKVE 846
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 18/256 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV G V+++G N GQLG GT + R P R L + A G +++
Sbjct: 1211 AGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA--RAVPTRMLGLDGAVAVAGGEYHSLM 1268
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G ++A G +S G+ G +L SP V L + V+A G + + L +G
Sbjct: 1269 LRFDGTLWATGNNSHGQLGEGTFTNRL--SPFQVVELDQVRTVRA--GGYHSVALREDGT 1324
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+T+ +LG T P P+ G + + AG + A+ + ++
Sbjct: 1325 VWTWGHNGQGQLGDGTVTTRRVPAPVPGL---TAIASVGAGTSHTFAVGSE-----TWAW 1376
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G +D P L++ + V AG + G DG +WG +G
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLVKGLHGVK----SVLAGGDFSVAQGADGSAMSWGTNVHG 1432
Query: 392 CLGHGNEECESVPKVV 407
LG G +VP V
Sbjct: 1433 TLGIGLPGQRTVPGAV 1448
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V IAAG + LAL + V++ G G++G G+ D P+ + + V
Sbjct: 101 VTSIAAGDAHSLALRADRT---VWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDV----VA 153
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
VAAG +H+ + DG V WG YG LG G+ + P V L V A+ A G +
Sbjct: 154 VAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVAL--AAGFDFS 211
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
V DG V+++G S LG DG + L P V+ L+ V+ ++T
Sbjct: 212 LAVRSDGTVWAWGANGSGQLG-----DGT---YIQRLAPTQVSQLQGVS------AVTAG 257
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+Y H AL G ++A+G+ GQ+G T+R +P +V
Sbjct: 258 LY---HALALRSDGTVWAWGSNSSGQMGD---GTWTDRPSPVQV 295
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 168/362 (46%), Gaps = 38/362 (10%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKC--GGSWKLVLRFLLAGEACCRRENSQ 149
Q ++S L LD+ K IF +E E Q ++Q C G + VL + E
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDE--------- 66
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-R 208
++ G+N SG LG G + PR + SL G +I + G+G
Sbjct: 67 ----------------IFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPH 110
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+L + G+V+ +G +++ + G LV Q+ +L N V++ A G++ + VL+
Sbjct: 111 VVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V+ + + N ++G N P + G L+N VV IA G + ++A +G V
Sbjct: 170 DGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EV 226
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
Y G G+LG GS ++ P + Q + +Q V A G H V+ +G+V WG
Sbjct: 227 YVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGAN 284
Query: 389 RYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASL 445
YG LG GN+ +S P VV + + I +T+ ++ G VY +G C G+S L
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 446 GH 447
H
Sbjct: 345 PH 346
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G G N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 L-----GSG---GNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 154/302 (50%), Gaps = 9/302 (2%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E QA G HS+ + S G V+S G N+ GQLG E RP I++L+ + + + G
Sbjct: 22 EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTA 264
++ + G+V+A+G S E + G++ K + +P+ +++L I ++Q + G++ +
Sbjct: 82 KEHSLAVCHKGRVFAWGAGS--EGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSL 139
Query: 265 VLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS +G+VY++ + +LG E P+ P + +LE IP+ Q+AAG + AL+
Sbjct: 140 ALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLSG 198
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ S G G+ + P I + L++ + ++ G H AV+ Q+G+V
Sbjct: 199 TSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDV--IYISCGYEHTAVLTQNGKVF 256
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G G LG+ + P+ V+ ++ + + + G Y T V G+V SFG G +
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVS-QIDCGSYHTLAYVYTTGEVVSFGRGRN 315
Query: 443 AS 444
+
Sbjct: 316 CA 317
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 299 GTLENIP-------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
G L +P V Q A G + L L S V+S G G+LG + E+ P
Sbjct: 9 GQLRRVPTGAGGAEVRQAACGERHSLLLL---SDGTVHSCGDNTQGQLGRRGKPREERPG 65
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQ 408
LI+ + L + +V+ G H+ V GRV WG G G LG EEC+ PK ++
Sbjct: 66 LIKALETLLVG--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI--EECKEKIFTPKKIK 121
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
L +K I V+ G Y + +SEDG VYS+G L G G + +PQ V
Sbjct: 122 TLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQL-------GLGKEFPSQASPQRVR 174
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 528
SL+ I L AH+FAL+ SG + +G+ + GQL + N +R P
Sbjct: 175 SLE-------GIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHS 227
Query: 529 V 529
+
Sbjct: 228 I 228
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 11/264 (4%)
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G + QAA G ++L+ G V++ G ++ G+ G +G P L+++L+ + V
Sbjct: 20 GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQL--GRRGKPREERPGLIKALETLLVGL 77
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G + + +GRV+ + G++ +LG + + TL I ++Q++ G+ +
Sbjct: 78 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYH 137
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
LAL+ VYS G G+LG G + P+ + + + L V AAG H+
Sbjct: 138 SLALS---EDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQV--AAGGAHSF 192
Query: 375 VVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
+ G WG G L G+ P + AL + I+++ G T V++++
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQN 252
Query: 432 GDVYSFGCGESASLGHNAIADGQG 455
G V++FG LG+N A +G
Sbjct: 253 GKVFTFGDNSCGQLGYNPTAKKRG 276
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 25/281 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
V QAA G + +L +G V++ +LG +P + P L+ LE + V ++ G
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERP-GLIKALETLLVGLVSCG 81
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGA 370
+ LA+ C V++ G G G+LG EK P+ I+ L ++ + V+ G
Sbjct: 82 KEHSLAV-CHKG--RVFAWGAGSEGQLGI-EECKEKIFTPKKIKT--LTGIKIIQVSCGH 135
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
+H+ + +DG+V +WG G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 136 YHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 195
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
G + +G + L A N P + +LK ++ V+ IS
Sbjct: 196 LSGTSFGWGSNNTGQL-----ALSGNNTPVQRYKPHSIGALKSLD--VIYISCGYE---- 244
Query: 490 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT++GK++ FG GQLG N ++ P++V+
Sbjct: 245 -HTAVLTQNGKVFTFGDNSCGQLG---YNPTAKKRGPQQVE 281
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 170/369 (46%), Gaps = 37/369 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G S+AV S G V+++G N GQLG GT P ++ L G+ + A GA ++
Sbjct: 101 SGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGLSGVTTV--ALGATHSLA 158
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G + +PQ+V L+ + V AA N AVLS +G
Sbjct: 159 LCYDGSVWAWGANDHGQLGDGTSIAR--RTPQMVAGLQEVVAV-AAGANHSLAVLS-DGT 214
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + D +LG T P P+ G L I V +A+G + LAL + V++
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRVPVPIQG-LSGI--VAVASGTSHSLALRYDGN---VWAW 268
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG GS P + + + V V G ++ V DG V TWG YG
Sbjct: 269 GSNYSGQLGDGSSLSRSSPVQVTELSGI----VSVEGGPDYSMAVRYDGTVWTWGINTYG 324
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G SVP L+ V A VA G + + ++++G + G +
Sbjct: 325 QLGDGTTIARSVPVQTSGLSGVVA--VAAGRTHALAMRANNSIWAWGGNVNGQRGDES-- 380
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ +P+ + +NE VV ++ TN H+ A+ G L+A+GA ++GQ
Sbjct: 381 ------RSVYFSPRTI-----LNE-VVTMAATND-----HSLAVRSDGGLWAWGANNEGQ 423
Query: 512 LGIELVNNQ 520
LG N+
Sbjct: 424 LGDGTTKNR 432
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 31/364 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV S G ++++G+N+ GQLG GTT+ W P + ++ AAG ++ + D
Sbjct: 403 HSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLG----NVVSVAAGRRHSLAVRDD 458
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G ++A+G ++ G+ G ++ + P V + I V A G+ ++ L + ++ +
Sbjct: 459 GSLWAWGSNTVGQLGDGTGSSRTI--PMQVPGISGIASVAA--GSDYSVALRYDRTLWAW 514
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ +LG T N P + G L I V IA G ++LA+ + V++ G
Sbjct: 515 GENSYGQLGDGTTVNRHVPTRVQG-LSGI--VAIATGNGHMLAVRSNGT---VWAWGDNS 568
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG G+ + P Q Q+L+ V A A H+ V DG + WG LG
Sbjct: 569 SGQLGDGTTINRATP---VQVQVLSGIVAVAAGAA-HSLAVRYDGTLWAWGINNTSQLGD 624
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G VP VQ + A+ V+ + + V DG ++ +G LG N Q
Sbjct: 625 GTGIPRLVPTQVQGIG--SAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRN-----QD 677
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
N + TP VT+L V E V + H+ AL G L +G GQLG
Sbjct: 678 NTNP---TPSKVTTLTGVTEAVGTFGYSIGF---GHSLALRSDGYLVGWGHNTYGQLGTG 731
Query: 516 LVNN 519
+ N
Sbjct: 732 VPEN 735
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 44/379 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++G N GQLG GTT P PI+ L G I+ A+G ++
Sbjct: 201 AGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLSG--IVAVASGTSHSLA 258
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G ++ +SP V L I V+ G ++ + +G
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDGSSLSR--SSPVQVTELSGIVSVEG--GPDYSMAVRYDGT 314
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+T+ +LG T P G VV +AAG + LA+ S +++
Sbjct: 315 VWTWGINTYGQLGDGTTIARSVPVQTSGLSG---VVAVAAGRTHALAMRANNS---IWAW 368
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G + G+ G SR+ PR I LN + V +AA H+ V DG + WG G
Sbjct: 369 GGNVNGQRGDESRSVYFSPRTI-----LN-EVVTMAATNDHSLAVRSDGGLWAWGANNEG 422
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G + P V L +V + VA G + V +DG ++++G LG
Sbjct: 423 QLGDGTTKNRWAPAEV--LGNV--VSVAAGRRHSLAVRDDGSLWAWGSNTVGQLG----- 473
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKG 510
DG G S + + +V IS S+ + ++ AL L+A+G G
Sbjct: 474 DGTG-------------SSRTIPMQVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYG 520
Query: 511 QLGIELVNNQTERGNPERV 529
QLG N R P RV
Sbjct: 521 QLGDGTTVN---RHVPTRV 536
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 18/257 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ ++++G NS GQLG GTT P ++ L GI I A G G +
Sbjct: 497 AGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQGLSGIVAI--ATGNGHMLA 554
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G + +P V+ L I V A + + +G
Sbjct: 555 VRSNGTVWAWGDNSSGQLGDGTTINR--ATPVQVQVLSGIVAVAAGAAHSL--AVRYDGT 610
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
++ + N ++LG T + P + G V ++A + LA+ + ++
Sbjct: 611 LWAWGINNTSQLGDGTGIPRLVPTQVQGIGS---AVAVSAAKHHSLAVLADGT---LWDW 664
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGW 387
G G+LG D +P + L + V + G H+ + DG + WG
Sbjct: 665 GANNYGQLGR--NQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGH 722
Query: 388 GRYGCLGHGNEECESVP 404
YG LG G E VP
Sbjct: 723 NTYGQLGTGVPENIPVP 739
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G GH +AV S G V+++G NSSGQLG GTT P ++ L I+ AAGA
Sbjct: 544 AIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLS--GIVAVAAGAAH 601
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G ++A+G ++ + G +LV P V+ + + V AA + AVL+
Sbjct: 602 SLAVRYDGTLWAWGINNTSQLGDGTGIPRLV--PTQVQGIGSAVAVSAAKHHSL-AVLA- 657
Query: 269 EGRVYTFSWGNDARLGH---HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+G ++ + N +LG +T P + L G E + + G+ + LAL
Sbjct: 658 DGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDG-- 715
Query: 326 MAVYSVGCGLG--GKLGHG 342
Y VG G G+LG G
Sbjct: 716 ---YLVGWGHNTYGQLGTG 731
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 174/374 (46%), Gaps = 16/374 (4%)
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHS--IAVTSK 163
K+ +F+P+ +A LK G W + F L EA + + G + + T
Sbjct: 2 KKILFQPV-QATLSSLKMLDVGKWPI---FSLCSEAELQLVRQACVFGSASNELLYTTVN 57
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFG 222
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G
Sbjct: 58 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWG 117
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
+++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N +
Sbjct: 118 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 176
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
+G + N P + G L++ VV IA G + ++A +G V+ G G+LG G
Sbjct: 177 VGSGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLG 233
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
S ++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S
Sbjct: 234 SSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 291
Query: 403 VPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHA 459
P VV + + I +T+ ++ G VY +G C G+S +L H + A
Sbjct: 292 YPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFA 351
Query: 460 NVLTPQLVTSLKQV 473
TP + L V
Sbjct: 352 CFATPAVTWRLLSV 365
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 113 VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 171
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L +++A G + V G+V+ +G + LG
Sbjct: 172 NNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 231
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ GN+ TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 232 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 276
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 277 NSYGQLGTGNKSNQS 291
>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 740
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 184/383 (48%), Gaps = 58/383 (15%)
Query: 166 VYSFGSNSSGQLGHG-TTEEEWRPR----PIRSLQGIRIIQAAAGAGRTMLISDAGQVYA 220
V++FGSN+ G LG + + + PR P+++ + ++ AG G + L++D ++Y+
Sbjct: 12 VFTFGSNAHGALGFDQSIKVQLVPRTLDVPVKAANAVHVV---AGNGASTLLTDGWEIYS 68
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGN 279
+GK + T+ Q V L+ + V++ + G+ +A + G VY WG
Sbjct: 69 WGKT-------------VGTNNQSVRKLQQLSNVLEVSHGSNHSATVLSSGEVY--GWGE 113
Query: 280 DARL-GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+ L G + +P L + Q+A G ++ L Q GM + S+G G+
Sbjct: 114 MSFLEGLRRKRTIKQPRKLTFDKVQLNAKQVACGDRHVCIL--QNDGM-LMSLGANDAGQ 170
Query: 339 LGHGSRTDE-----KHPRLIEQF--QLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRY 390
LG G ++ E H R++ + L N+Q VA G H A+ QDG + +WGWG
Sbjct: 171 LGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCVAISAQDGALFSWGWGTN 230
Query: 391 GCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LGH +EE P V+AL+ V+ VA G T +++GDVY FG GH+
Sbjct: 231 GRLGHMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEGDVYGFGWN-----GHSQ 285
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+A G+ + L P L N+ VV++S AH+ A++ SG L+ +G D
Sbjct: 286 VAGGE----TDCLKPMLCLE----NQGVVRLSCG-----FAHSAAISSSGSLFTWGMNDD 332
Query: 510 GQLGIELVNNQTERGNPERVDID 532
GQ G V N+ P RV+ +
Sbjct: 333 GQCG---VGNEETVPRPTRVEFE 352
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 32/302 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQ-LGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS V S G VY +G S + L T ++ R +Q + Q A G +
Sbjct: 95 GSNHSATVLSSGEVYGWGEMSFLEGLRRKRTIKQPRKLTFDKVQ-LNAKQVACGDRHVCI 153
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQG--TKL-VTSPQLV----ESLKNIFVVQAAIG-NFFT 263
+ + G + + G + G+ G Q TK+ + ++V +SL N+ + A G N
Sbjct: 154 LQNDGMLMSLGANDAGQLGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCV 213
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
A+ +++G ++++ WG + RLGH +E +P + P ++A G + LA +
Sbjct: 214 AISAQDGALFSWGWGTNGRLGHMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEG 273
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY G ++ G TD P L L N V ++ G H+A + G +
Sbjct: 274 D---VYGFGWNGHSQVA-GGETDCLKPMLC----LENQGVVRLSCGFAHSAAISSSGSLF 325
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG G G GNE E+VP+ + + + G Y +G V S CG S
Sbjct: 326 TWGMNDDGQCGVGNE--ETVPRPTRVEFEDRG-----GRY-------EGHVISVACGHSH 371
Query: 444 SL 445
++
Sbjct: 372 TV 373
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 46/345 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTSPQL 244
P+ + S + + A G L++ G+V+ +G + ++G G K+ ++SP++
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWG-----QGKWGRLGQKIDMDISSPKI 349
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGT 300
V+SL + V A G + T L+ G VYT WGND L + P L G
Sbjct: 350 VDSLNGLHVKTVACGEYHTCALTDSGEVYT--WGNDVCCADLLNEGRTRSQWIPQRLGGP 407
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L+ I + +A G + ++ S +++ G G G LGHG P+ +E L
Sbjct: 408 LDGISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLR 464
Query: 361 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
++ A G+WH A + + G++ TWG G G LGH + + VP V
Sbjct: 465 VRSA--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQ 522
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L D + V+ G T ++ G V++ G + L GN HA ++V
Sbjct: 523 LVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL---------GNPHAR---DKVVIV 570
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
Q+ + V++ T S H LT +G +Y +G G+ GQLG+
Sbjct: 571 EGQLKQEFVKVISTGSY----HVAVLTSAGSVYTWGRGEIGQLGL 611
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 140/283 (49%), Gaps = 23/283 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ A+T G VY++G++ + L G T +W P+ + L GI I A G T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
++S G+++ +G +FG +G + +SP+ VESL + V AA G++ TA +
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEV 481
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
S G+++T+ G++ RLGH N + P + L + VQ++ G +A
Sbjct: 482 MFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVP-TRVTQLVDYDFVQVSCGRMLTVA 540
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G G+LG+ D+ +I + QL V++ G++H AV+
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVKVISTGSYHVAVLTS 594
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
G V TWG G G LG G+ E P V+AL D + + G
Sbjct: 595 AGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCG 637
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 23/253 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ V+S G ++++G + G LGHG P+ + SL G+R+ AA G+
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSW 473
Query: 208 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T I S +G+++ +G G + G K+V P V L + VQ
Sbjct: 474 HTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIV--PTRVTQLVDYDFVQV 531
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ G T L+ G+V+ +LG+ + V + G L+ V I+ G ++
Sbjct: 532 SCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV--IVEGQLKQEFVKVISTGSYHV 589
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGAW 371
L S +VY+ G G G+LG G D P +E Q + P AA
Sbjct: 590 AVLT---SAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAICL 646
Query: 372 HAAVVGQDGRVCT 384
H + D C+
Sbjct: 647 HKPISISDQSTCS 659
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 30/170 (17%)
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-GHGNEEC- 400
+R D++H + + L++ V + V +D V WG G GCL G NE
Sbjct: 235 TRIDKEHKKNLSDSYLMHFTTPHVGK-----SNVLKD--VMIWGGG-IGCLVGIVNERFV 286
Query: 401 -----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
VPK++++ + ++A G +V++ G+V+ +G G+ LG D
Sbjct: 287 HPGIYSLVPKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMD--- 343
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+ +P++V SL ++ + V HT ALT+SG++Y +G
Sbjct: 344 -----ISSPKIVDSLNGLHVKTVACG-------EYHTCALTDSGEVYTWG 381
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 12/298 (4%)
Query: 142 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRII 200
C QA G H++ +T G ++S G+N GQLGH T RP+ I SL+ +
Sbjct: 33 CHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVT 92
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G ++ +++ GQV+++G +S G+ + + T+P++++++ VVQ A G
Sbjct: 93 HVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTD-LQTYTTPRMIKTIATKTVVQIASGQ 151
Query: 261 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
F + L+ G + FSWG + +LG T V L+ +L IP+ IA G + +
Sbjct: 152 FHSLALTNSGEL--FSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNH--S 207
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
A SG A++ G G+LG P+ ++ L NL ++ G +A + Q
Sbjct: 208 FAVSKSG-AIFGWGKNTFGQLGLNDLVSRCFPQQLK--TLRNLGVRYISCGDDFSAFLTQ 264
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 435
+G V T G G +G LGHG E +P++V L K +A G +T V G +Y
Sbjct: 265 EGGVFTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 164/344 (47%), Gaps = 31/344 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
VY +G+ G+LG G E+E PR + + QAA G T+L++ G++++ G
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-- 281
+ G+ + PQ + SL+N V + G + L+ G+V FSWG+++
Sbjct: 63 NDHGQLGHDTDCLP-NKRPQFISSLENYIVTHVSCGTTHSLALTNWGQV--FSWGSNSIG 119
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH T+ ++ T+ VVQIA+G + LAL + ++S G G+LG
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALT---NSGELFSWGANGYGQLGL 176
Query: 342 GSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G+ T EK P L++ L + +A G H+ V + G + WG +G LG +
Sbjct: 177 GT-TGEKVVTPTLVKS--LAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLV 233
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
P+ ++ L ++ +++ GD + ++++G V++ G G LGH +
Sbjct: 234 SRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTC--------S 285
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLY 502
N + P++V L + ++ QI+ HT A S GK+Y
Sbjct: 286 NEILPRMVFEL--MGSKITQIACGRR-----HTLAFVPSRGKIY 322
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 22/298 (7%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
VY +G GE G + V P+ ++ + V QAA G T +L+++G++++
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LGH T+ + + +LEN V ++ G + LAL + V+S G G
Sbjct: 63 NDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALT---NWGQVFSWGSNSIG 119
Query: 338 KLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
+LGH + PR+I+ + V +A+G +H+ + G + +WG YG LG G
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTV--VQIASGQFHSLALTNSGELFSWGANGYGQLGLG 177
Query: 397 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
E P +V++L + +A G +F VS+ G ++ +G LG N +
Sbjct: 178 TTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLV---- 233
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ PQ + +L+ + R + S + LT+ G ++ GAG GQLG
Sbjct: 234 ----SRCFPQQLKTLRNLGVRYISCGDDFSAF-------LTQEGGVFTCGAGTFGQLG 280
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 21/193 (10%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
MAVY G + G+LG G DE+ PR ++ ++Q A G H ++ +DG++
Sbjct: 1 MAVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQ--AACGTSHTLLLTKDGKLF 58
Query: 384 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ G +G LGH + +C P+ + +L + HV+ G + ++ G V+S+G
Sbjct: 59 SCGNNDHGQLGH-DTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH+ D Q TP+++ ++ + VVQI+ H+ ALT SG+L
Sbjct: 118 IGQLGHD--TDLQ-----TYTTPRMIKTI--ATKTVVQIASG-----QFHSLALTNSGEL 163
Query: 502 YAFGAGDKGQLGI 514
+++GA GQLG+
Sbjct: 164 FSWGANGYGQLGL 176
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 20/316 (6%)
Query: 144 RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
RR ++A+ G H++ + + G VYS G+N GQLG + + S IR
Sbjct: 80 RRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRA 139
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ A G ++ +SDAGQV+++G + G+ G + + P++++ L + +VQ A G
Sbjct: 140 V--ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLHIVQIACG 196
Query: 260 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
L+ G + FSWG +A LG + N+ P + L +P+ +A G +
Sbjct: 197 AVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPRR-VSHLVGVPLALVACGAMH 253
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+ L PSG V+ G G+LG + D HP +++ + ++ V G H A
Sbjct: 254 SVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCCGENHTAA 308
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 434
+ DG V T+G G YG LGHG + E+VP+ V L ++ G +T + G +
Sbjct: 309 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRL 368
Query: 435 YSFGCGESASLGHNAI 450
Y FG G S LG+ +
Sbjct: 369 YIFGLGMSGQLGNGTL 384
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 160/359 (44%), Gaps = 34/359 (9%)
Query: 165 VVYSFGSNSSGQLG-----HGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
++YS+G +G+LG G E +P +R + + A G T+++ G
Sbjct: 46 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 105
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
VY+ G + FG+ KL + V +L + A G + LS G+V+++
Sbjct: 106 VYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 161
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LG TE ++ L + +VQIA G + LALA + ++S G G
Sbjct: 162 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA---NNGELFSWGGNASG 218
Query: 338 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+LG G S +E+ PR + L+ + +VA GA H+ + G V WG G LG
Sbjct: 219 QLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL 276
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
++ P V++ L + HV G+ T ++ DG V++FG G LGH
Sbjct: 277 SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGV------ 330
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
N P+ V L + + Q+S HT A +SG+LY FG G GQLG
Sbjct: 331 --KVNEAVPRRVVEL--MGTAISQLSCG-----RCHTVAYAPQSGRLYIFGLGMSGQLG 380
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ G V+S+G N +GQLG GT EE RP+ I+ L + I+Q A GA +
Sbjct: 143 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 202
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+++ G+++++G ++ G+ G T P+ V L + + A G + L+ G
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 262
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG ++ +LG + + + P +L L + + + G + AL + V+
Sbjct: 263 V--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALT---ADGGVF 316
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGHG + +E PR + +L+ ++ G H A Q GR+ +G G
Sbjct: 317 TFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLG 374
Query: 389 RYGCLGHGNEECESVPKVVQAL 410
G LG+G E ++P V L
Sbjct: 375 MSGQLGNGTLESSALPVTVPGL 396
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 206
Q G H +A+ + G ++S+G N+SGQLG G +T E PR + L G+ + A GA
Sbjct: 192 QIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGA 251
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ ++ +G V+ +G++S G+ Q +L P +++ L++ + G TA L
Sbjct: 252 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL--HPTVLKPLRSQRIKHVCCGENHTAAL 309
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G V+TF G +LGH + N+ P ++ L + Q++ G C+ +A A P
Sbjct: 310 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYA--PQSG 366
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+Y G G+ G+LG+G+ P V G WH
Sbjct: 367 RLYIFGLGMSGQLGNGTLESSALP--------------VTVPGLWH 398
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 326 MAVYSVGCGLGGKLGH-------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
M +YS G G G+LG + T P + +F ++ V A G H V+
Sbjct: 45 MLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREV--ACGHKHTLVLLA 102
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+G V + G +G LG S+ K+ V AL+ + VA G+ + +S+ G V+S
Sbjct: 103 NGSVYSCGANDFGQLGQD----RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFS 158
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+GC + LG G + L P+++ L ++ +VQI+ H AL
Sbjct: 159 WGCNRNGQLG-------CGTEEESRLRPKVIKKLATLH--IVQIACGA-----VHCLALA 204
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+G+L+++G GQLG+ + ER P RV
Sbjct: 205 NNGELFSWGGNASGQLGLGRDSTGNER-LPRRV 236
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 155/345 (44%), Gaps = 61/345 (17%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +TS G V S GSN QLG + +P P+ +LQ +RI+Q G
Sbjct: 55 QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT--KPEPVTALQCLRIVQVCCGQQH 112
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+M +++AGQVY +G +S G+ G +G + SP+ V++L VVQ A G+ L
Sbjct: 113 SMALTEAGQVYMWGSNSKGQLGNG-EGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171
Query: 269 EGRVYTFSWGNDAR----LGHHTEPND--VEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
G +Y +WG++ +G EP VE LLG +P+ QIA G + + L+
Sbjct: 172 NGALY--AWGDNGNGQLGIGTVGEPQRVPVEVTNLLG----LPLSQIACGANHSMVLS-- 223
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
SG+ ++ G G+LG D P L++ + +++ +AAG H+A + G V
Sbjct: 224 KSGV-IFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVK--FIAAGGAHSAALTAHGGV 280
Query: 383 CTWGW----------------------------------------GRYGCLGHGNEECES 402
T+GW G YG LGHG++ +
Sbjct: 281 FTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQL 340
Query: 403 VPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 446
P +Q L +A G +T G V++FG G + LG
Sbjct: 341 TPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 52/381 (13%)
Query: 169 FGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 226
FG+ +SG+LG G E+ PR I L+GIR+ Q A GA T++++ G+V + G +
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH- 285
+ V TK P+ V +L+ + +VQ G + L+ G+VY + + +LG+
Sbjct: 81 DQLGQEVSTTK----PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNG 136
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
+ + + P + TL VVQIA G + LAL + A+Y+ G G+LG G+
Sbjct: 137 EGQESRLSPR-FVKTLAPFTVVQIACGSNHCLALL---NNGALYAWGDNGNGQLGIGT-V 191
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
E +E LL L +A GA H+ V+ + G + WG R+G LG + + + P
Sbjct: 192 GEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPT 251
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-----------------CGESASLGHN 448
+++ L +A G + ++ G V++FG ++L
Sbjct: 252 LLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARK 311
Query: 449 --AIADGQGNRHA-------------NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
++ + + RH+ + LTP + L + + QI+L HT
Sbjct: 312 LFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQEL--MGTTITQIALG-----RCHTV 364
Query: 494 ALTES-GKLYAFGAGDKGQLG 513
+ GK++ FG G GQLG
Sbjct: 365 CYAPTVGKVFTFGLGGNGQLG 385
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 28/201 (13%)
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
GLGG H R PR I Q + + ++ + A GA H V+ GRV + G + L
Sbjct: 30 GLGGIEDHIVRV----PRSIPQLEGIRVRQI--ATGAHHTLVLTSHGRVLSCGSNDHDQL 83
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G E + P+ V AL ++ + V G + ++E G VY +G LG+ +G
Sbjct: 84 GQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN---GEG 138
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q +R L+P+ V +L VVQI+ ++ H AL +G LYA+G GQLG
Sbjct: 139 QESR----LSPRFVKTLAPFT--VVQIACGSN-----HCLALLNNGALYAWGDNGNGQLG 187
Query: 514 IELVNNQTERGNPERVDIDLS 534
I V G P+RV ++++
Sbjct: 188 IGTV------GEPQRVPVEVT 202
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G HS+ ++ GV++ +GSN GQLG ++ P +++L+ + AAG
Sbjct: 210 SQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGA 269
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G V+ FG + E + ++P Q+A+ +++
Sbjct: 270 HSAALTAHGGVFTFGWSFYESHEVRISLRGTESNP------------QSALARKLFSLIE 317
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPS 324
RE S+G+ +LGH ++ + + P L+GT + QIA G C+ + A P+
Sbjct: 318 RE--FCRHSYGSYGQLGHGSKNDQLTPMKIQELMGT----TITQIALGRCHTVCYA--PT 369
Query: 325 GMAVYSVGCGLGGKLG 340
V++ G G G+LG
Sbjct: 370 VGKVFTFGLGGNGQLG 385
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LE I V QIA G + L L S V S G +LG T + P + Q L
Sbjct: 48 LEGIRVRQIATGAHHTLVLT---SHGRVLSCGSNDHDQLGQEVSTTKPEP--VTALQCLR 102
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVA 419
+ V V G H+ + + G+V WG G LG+G +E P+ V+ L + +A
Sbjct: 103 I--VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIA 160
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G + +G +Y++G + LG + + Q P VT+L +
Sbjct: 161 CGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQR-------VPVEVTNL-------LG 206
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
+ L+ H+ L++SG ++ +G+ GQLG+ ++ +R P
Sbjct: 207 LPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGL---SDNKDRAFP 250
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 150/295 (50%), Gaps = 26/295 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G HS AVT G +Y++G +++SG LGHG+ W P+ + ++G+ + A G T
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHT 411
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ AGQ++ FG +FG +G + ++ P+ VE+L+ ++ A G + TA +
Sbjct: 412 AVVTSAGQLFTFGDGTFGALGHGDHSS--MSIPREVEALRGQRTMRVACGVWHTAAVVEL 469
Query: 267 ------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
S G+++T+ G+ RLGH + + P + L N Q+A G+
Sbjct: 470 MIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTA-LINESFCQVACGHN 528
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L++A SG VY++G + G+LG D K P L+E ++ N VA G++H A
Sbjct: 529 --LSVALTTSGR-VYTMGSAVYGQLG-SPVADGKIPTLVEG-KIANSFVEEVACGSYHVA 583
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
V+ V TWG G G LGHG+ + + P +V L D + +V G T +S
Sbjct: 584 VLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 173/383 (45%), Gaps = 48/383 (12%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V+ GS+SS ++ + P+ + S + + A G +L++ G+V+++G++
Sbjct: 267 VHRVGSSSSTKI------DALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARL 283
+GV+ V+ P+L+++L + + A G + + ++ G +YT+ G N L
Sbjct: 321 GSRLGHGVEVD--VSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLL 378
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
GH +E + P + G +E + V +A G + A S +++ G G G LGHG
Sbjct: 379 GHGSEASHWIPKKVSGPMEGMHVSYVACGPWH---TAVVTSAGQLFTFGDGTFGALGHGD 435
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------------DGRVCTWGWG 388
+ PR +E L + + VA G WH A V + G++ TWG G
Sbjct: 436 HSSMSIPREVE--ALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDG 493
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGHG++E VP+ V AL + VA G + ++ G VY+ G LG +
Sbjct: 494 DKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLG-S 552
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ADG+ P LV K N V +++ + H LT ++Y +G G
Sbjct: 553 PVADGK--------IPTLVEG-KIANSFVEEVACG-----SYHVAVLTSKTEVYTWGKGT 598
Query: 509 KGQLGIELVNNQTERGNPERVDI 531
GQLG + R P VD
Sbjct: 599 NGQLGH---GDNDHRNTPTLVDF 618
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 165/359 (45%), Gaps = 46/359 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT KG V+S+G +LGHG + P+ I +L G+ I A G + +
Sbjct: 300 GGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAV 359
Query: 213 SDAGQVYAFGKDSF--GEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+ +G +Y +G + G +G + + + P+ V ++ + V A G + TAV++
Sbjct: 360 TLSGDLYTWGDGTHNSGLLGHGSEASHWI--PKKVSGPMEGMHVSYVACGPWHTAVVTSA 417
Query: 270 GRVYTFSWGNDARLGH--HTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA---- 320
G+++TF G LGH H+ P +VE L +++A G + A+
Sbjct: 418 GQLFTFGDGTFGALGHGDHSSMSIPREVE------ALRGQRTMRVACGVWHTAAVVELMI 471
Query: 321 --------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAGA 370
S +++ G G G+LGHG +K PRL+ Q L+N VA G
Sbjct: 472 ASSSFESSGSSSSGKLFTWGDGDKGRLGHG----DKEPRLVPQSVTALINESFCQVACGH 527
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVS 429
+ + GRV T G YG LG + + +P +V+ + + VA G Y V++
Sbjct: 528 NLSVALTTSGRVYTMGSAVYGQLGSPVADGK-IPTLVEGKIANSFVEEVACGSYHVAVLT 586
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSI 486
+VY++G G + LGH N H N TP LV L KQV V ++ T +I
Sbjct: 587 SKTEVYTWGKGTNGQLGHG------DNDHRN--TPTLVDFLKDKQVKNVVCGLNFTAAI 637
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 26/259 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG PR + +L+G R ++ A G T +
Sbjct: 407 GPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAV 466
Query: 213 SD---------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ +G+++ +G G +G + +LV PQ V +L N Q A
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLV--PQSVTALINESFCQVA 524
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+ + L+ GRVYT +LG + P + G + N V ++A G ++
Sbjct: 525 CGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKI-PTLVEGKIANSFVEEVACGSYHVA 583
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWH 372
L S VY+ G G G+LGHG P L++ + ++ VV AA + H
Sbjct: 584 VLT---SKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLH 640
Query: 373 AAVVGQDGRVCTWGWGRYG 391
V D +C+ ++G
Sbjct: 641 KWVSCADHSICSGCHNQFG 659
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 26/312 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--------WRPRPIRSLQGIRII 200
Q G HS+ + G V+S G+N QLGH + + W +S GI +I
Sbjct: 56 QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVI 115
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVE-SLKNIFVVQA 256
A G + +++ G ++++G + +G+ GV+ +V P++ E +L NI VQ
Sbjct: 116 SVACGDAHCVALTNDGHLFSWGSNVYGQL--GVERMNVVAKARYPRIQEINLANI--VQI 171
Query: 257 AIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G N A+ S +G ++ + + +LG T + + P + L IP+ Q+AAG +
Sbjct: 172 ACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGP-TTVNKLMGIPICQLAAGASH 230
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
L L PSG V+ G + G++G + D +P L+ +LL Q V+ +A G +
Sbjct: 231 SLVLT--PSG-TVFGWGKNMFGQIGQNEQRDILYPSLV---KLLRTQKVIRLACGEDFSV 284
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
V G + T+G G YG LGHGN+ E PK V L + VA G T ++E+ +
Sbjct: 285 AVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITEN-KL 343
Query: 435 YSFGCGESASLG 446
Y+FG S LG
Sbjct: 344 YAFGLNTSGQLG 355
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 172/372 (46%), Gaps = 50/372 (13%)
Query: 170 GSNSSGQLGHGTTEEEWRPRPIRSL-------QGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G+ S GQLG G EE +RSL ++I Q A G ++++ D G V++ G
Sbjct: 22 GNTSDGQLGLGGIAEE----NVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCG 77
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLK----------NIFVVQAAIGNFFTAVLSREGRV 272
+ F + G G K P L E+L I V+ A G+ L+ +G +
Sbjct: 78 NNDF--YQLGHDGIK--RKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHL 133
Query: 273 YTFSWGNDARLGHHTEPNDV---EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
FSWG++ E +V +P + + +VQIA G + LAL + + ++
Sbjct: 134 --FSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL--ESTDGVLH 189
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G+R P + + L+ + +AAGA H+ V+ G V WG
Sbjct: 190 AWGLNDHGQLGIGTRESFIGPTTVNK--LMGIPICQLAAGASHSLVLTPSGTVFGWGKNM 247
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G +G + P +V+ L K I +A G+ + V+ G +++FG G LGH
Sbjct: 248 FGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGH-- 305
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
GN+++ + Q++ + V V+ ++ HT A+TE+ KLYAFG
Sbjct: 306 -----GNQNSELFPKQVMELMGSV---VLDVACG-----RCHTLAITEN-KLYAFGLNTS 351
Query: 510 GQLGIELVNNQT 521
GQLG+ V + T
Sbjct: 352 GQLGLLNVKHTT 363
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G+ G G E S+ V N +K +A G + + ++ +DG V+S G + LGH
Sbjct: 27 GQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH 86
Query: 448 NAIADGQGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
+ I P L +L V + V I + + +AH ALT G L+++
Sbjct: 87 DGIKR----------KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSW 136
Query: 505 GAGDKGQLGIELVNNQTERGNPERVDIDLS 534
G+ GQLG+E +N + P +I+L+
Sbjct: 137 GSNVYGQLGVERMNVVAKARYPRIQEINLA 166
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVY 219
T V+ G N SG LG G + PR + SL G +I + G+G +L ++ G+VY
Sbjct: 43 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVY 102
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G +++ + G V Q+ +L N V++ A G+ + VL+ +G VYT+ + N
Sbjct: 103 TWGHNAYSQLGNGTTNHGFVPC-QVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNN 161
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
++G + N P + L+N VV IA G + ++A +G VY G G+L
Sbjct: 162 SGQVGSGSTANQPIPRRVTSCLQNKIVVNIACG--QMCSMAVVENG-EVYVWGYNGNGQL 218
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G GS ++ P I Q + +Q VA G H V+ +G++ WG YG LG GN+
Sbjct: 219 GLGSSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKS 276
Query: 400 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
+S P V D V I +T+ ++ G VY +G C G+S L H
Sbjct: 277 NQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVILPH 327
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T +G VY++G N+ QLG+GTT + P + + L ++I+ A G+ +M
Sbjct: 88 SGP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSM 146
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VY +G ++ G+ G + + P+ V S L+N VV A G + +
Sbjct: 147 VLTSDGEVYTWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIVVNIACGQMCSMAVVEN 204
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + +
Sbjct: 205 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---I 259
Query: 329 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
Y+ G G+LG G+++++ +P ++++ +++ + A +A Q G+V WG
Sbjct: 260 YAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIE---IAACHSAHTSAAKTQSGQVYMWG 316
Query: 387 WGR 389
R
Sbjct: 317 QCR 319
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 207
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 137 EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQM 196
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + + G+VY +G + G+ G G + +P + +L+ I V + A G T VL+
Sbjct: 197 CSMAVVENGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAHTLVLT 254
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
EG++Y + + +LG + N + +P ++ V++IAA
Sbjct: 255 DEGQIYAWGANSYGQLGTGNKSN--QSYPTTVVVDKDRVIEIAA 296
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P + L+N + + VA G+ H+ V+ DG V TWG+
Sbjct: 101 VYTWGHNAYSQLGNGTTNHGFVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 159
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + +++A G + V E+G+VY +G + LG
Sbjct: 160 NNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 219
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 220 LGS--------SGNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQIYAWGA 264
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V +D
Sbjct: 265 NSYGQLG---TGNKSNQSYPTTVVVD 287
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E+ +L+ Q V + ++ V G GCLG G+ + P+ + +L
Sbjct: 21 EELKLIR-QACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGK 79
Query: 414 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 471
K ++ G V+ +E+G+VY++ GHNA + G G + + Q+ T+L
Sbjct: 80 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGFVPCQVSTNL- 130
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
VN++V++++ + H+ LT G++Y +G + GQ+G NQ
Sbjct: 131 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 173
>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 163/365 (44%), Gaps = 42/365 (11%)
Query: 149 QAIAGPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
A +GP HSI V G V SFG N GQLGHGTTE P+ I L+ I+QA+ G
Sbjct: 115 HAASGPSACHSIIVCEDGRVMSFGRNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGR 174
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
G T++++DAG V+ FG + G+ G Q + P + + V + G F+ +L
Sbjct: 175 GHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLL 234
Query: 267 SREGRVYTFSWGNDARLGHHTEPN------------DVEPHPL-----------LGTLEN 303
G +++F +LGH+T+ +V P L + +E
Sbjct: 235 DENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEG 294
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ + + G + +AL Q V++ G G G+LGH DE PRL+ F P
Sbjct: 295 VKIKDVVCGNNHTMALDEQGR---VFTWGFGGYGRLGHQQPKDEHVPRLLTFFNTKG-NP 350
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
V+ AG+ ++ V G++ WG + + E PK VQ L+ + V
Sbjct: 351 SVIFAGSTYSMAVCM-GQLYFWGQTKQ------SGEAAMYPKPVQDLSGWQVRSVGCSK- 402
Query: 424 TTFVVSEDGDVYSFGCGES-ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
++ V++ D V S+G + LG+ GQ + P++V L+ + V +
Sbjct: 403 SSIVIAADDSVVSWGPSPTYGELGYGLKKGGQ----KSSTNPKIVEPLEDIYVHSVTCGM 458
Query: 483 TNSIY 487
++++
Sbjct: 459 GHTLF 463
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 23/240 (9%)
Query: 289 PNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
PN EPH L+ TL I V A+G C+ + + C+ V S G G+LGHG+
Sbjct: 97 PNLWEPH-LISTLSGIRVRHAASGPSACHSI-IVCEDG--RVMSFGRNDKGQLGHGTTER 152
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
P++I++ ++ N+ V + G H ++ G V +G + G +G G+++ S+P
Sbjct: 153 CDVPKVIDRLKMHNI--VQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCP 210
Query: 407 VQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN---- 460
+Q ++ D K V G + ++ E+GD++SFG E LGHN DGQ +N
Sbjct: 211 LQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNT--DGQYIVSSNKMGF 268
Query: 461 ---VLTPQLVTSLKQVNERVVQ----ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
VL +LV +++ + V + + + + N HT AL E G+++ +G G G+LG
Sbjct: 269 QCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLG 328
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 58/320 (18%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI--RIIQAAAGA 206
QA G GH++ +T G+V+ FG N GQ+G G + P P++ + ++ + GA
Sbjct: 169 QASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGA 228
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL---------------------- 244
+ML+ + G +++FG +G+ + G +V+S ++
Sbjct: 229 EFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGF 288
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
V ++ + + GN T L +GRV+T+ +G RLGH +P D E P L T N
Sbjct: 289 VNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQ-QPKD-EHVPRLLTFFNT 346
Query: 305 ---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-----HPRLIEQF 356
P V I AG Y +A+ G+L +T + +P+ ++
Sbjct: 347 KGNPSV-IFAGSTYSMAVCM---------------GQLYFWGQTKQSGEAAMYPKPVQDL 390
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGH----GNEECESVPKVVQALN 411
++ V + + V+ D V +WG YG LG+ G ++ + PK+V+ L
Sbjct: 391 SGWQVRSVGCSKS---SIVIAADDSVVSWGPSPTYGELGYGLKKGGQKSSTNPKIVEPLE 447
Query: 412 DVKAIHVATGDYTTFVVSED 431
D+ V G T +++D
Sbjct: 448 DIYVHSVTCGMGHTLFIAKD 467
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 38/255 (14%)
Query: 186 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
W P I +L GIR+ AA+G A ++++ + G+V +FG++ G+ +G T+ P+
Sbjct: 100 WEPHLISTLSGIRVRHAASGPSACHSIIVCEDGRVMSFGRNDKGQLGHGT--TERCDVPK 157
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPL-L 298
+++ LK +VQA+ G T +L+ G V+ F D +LG H +P + P PL +
Sbjct: 158 VIDRLKMHNIVQASCGRGHTLILTDAGLVFGF---GDNKLGQIGQGHQKPTSL-PCPLQI 213
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------ 346
+ V ++ G + + L ++S G G+LGH +
Sbjct: 214 MHPTDKKVTKVCCGAEFSMLLD---ENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQC 270
Query: 347 EKHPRLIEQFQLLNLQPVV----------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
E PR + F N V V G H + + GRV TWG+G YG LGH
Sbjct: 271 EVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQ 330
Query: 397 NEECESVPKVVQALN 411
+ E VP+++ N
Sbjct: 331 QPKDEHVPRLLTFFN 345
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 20/316 (6%)
Query: 144 RRENSQAI----AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
RR ++A+ G H++ + + G VYS G+N GQLG + + S IR
Sbjct: 86 RRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRA 145
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ A G ++ +SDAGQV+++G + G+ G + + P++++ L + +VQ A G
Sbjct: 146 V--ACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLHIVQIACG 202
Query: 260 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
L+ G + FSWG +A LG + N+ P + L +P+ +A G +
Sbjct: 203 AVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPRR-VSHLVGVPLALVACGAMH 259
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+ L PSG V+ G G+LG + D HP +++ + ++ V G H A
Sbjct: 260 SVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCCGENHTAA 314
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 434
+ DG V T+G G YG LGHG + E+VP+ V L ++ G +T + G +
Sbjct: 315 LTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRL 374
Query: 435 YSFGCGESASLGHNAI 450
Y FG G S LG+ +
Sbjct: 375 YIFGLGMSGQLGNGTL 390
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 160/359 (44%), Gaps = 34/359 (9%)
Query: 165 VVYSFGSNSSGQLG-----HGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
++YS+G +G+LG G E +P +R + + A G T+++ G
Sbjct: 52 LLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGS 111
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
VY+ G + FG+ KL + V +L + A G + LS G+V+++
Sbjct: 112 VYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 167
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LG TE ++ L + +VQIA G + LALA + ++S G G
Sbjct: 168 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA---NNGELFSWGGNASG 224
Query: 338 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+LG G S +E+ PR + L+ + +VA GA H+ + G V WG G LG
Sbjct: 225 QLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGL 282
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
++ P V++ L + HV G+ T ++ DG V++FG G LGH
Sbjct: 283 SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGV------ 336
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
N P+ V L + + Q+S HT A +SG+LY FG G GQLG
Sbjct: 337 --KVNEAVPRRVVEL--MGTAISQLSCG-----RCHTVAYAPQSGRLYIFGLGMSGQLG 386
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+A++ G V+S+G N +GQLG GT EE RP+ I+ L + I+Q A GA +
Sbjct: 149 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 208
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+++ G+++++G ++ G+ G T P+ V L + + A G + L+ G
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGT 268
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V F WG ++ +LG + + + P +L L + + + G + AL + V+
Sbjct: 269 V--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQRIKHVCCGENHTAALT---ADGGVF 322
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWG 388
+ G G G+LGHG + +E PR + +L+ ++ G H A Q GR+ +G G
Sbjct: 323 TFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLG 380
Query: 389 RYGCLGHGNEECESVPKVVQAL 410
G LG+G E ++P V L
Sbjct: 381 MSGQLGNGTLESSALPVTVPGL 402
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLQGIRIIQAAAGA 206
Q G H +A+ + G ++S+G N+SGQLG G +T E PR + L G+ + A GA
Sbjct: 198 QIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGA 257
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ ++ +G V+ +G++S G+ Q +L P +++ L++ + G TA L
Sbjct: 258 MHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRL--HPTVLKPLRSQRIKHVCCGENHTAAL 315
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +G V+TF G +LGH + N+ P ++ L + Q++ G C+ +A A P
Sbjct: 316 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYA--PQSG 372
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+Y G G+ G+LG+G+ P V G WH
Sbjct: 373 RLYIFGLGMSGQLGNGTLESSALP--------------VTVPGLWH 404
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 326 MAVYSVGCGLGGKLGH-------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
M +YS G G G+LG + T P + +F ++ V A G H V+
Sbjct: 51 MLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREV--ACGHKHTLVLLA 108
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+G V + G +G LG S+ K+ V AL+ + VA G+ + +S+ G V+S
Sbjct: 109 NGSVYSCGANDFGQLGQD----RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFS 164
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+GC + LG G + L P+++ L ++ +VQI+ H AL
Sbjct: 165 WGCNRNGQLG-------CGTEEESRLRPKVIKKLATLH--IVQIACGA-----VHCLALA 210
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+G+L+++G GQLG+ + ER P RV
Sbjct: 211 NNGELFSWGGNASGQLGLGRDSTGNER-LPRRV 242
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 168/363 (46%), Gaps = 40/363 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C F AG
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC--------VFGTAGN----------- 56
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTM 210
+ T ++ G+N SG LG G + PR + SL G +I + G+G +
Sbjct: 57 ----EVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIV 112
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + N ++G + N P + G L+N V+ IA G + ++A +G VY
Sbjct: 172 EVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ--MCSMAVVDTG-EVYV 228
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG Y
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSY 286
Query: 391 GCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESAS 444
G LG GN+ +S P V D + A H A +T+ S+ G VY +G C G+S
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKSQGGHVYMWGQCRGQSVI 343
Query: 445 LGH 447
L H
Sbjct: 344 LPH 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + + +A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 1032
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 154/348 (44%), Gaps = 40/348 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +++ G+VY +G+ G G + ++SP++V++
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDISSPKIVDT 352
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLEN 303
L +I V A G + T L+ G VY +WGND + + H L +E
Sbjct: 353 LSDIRVKNVACGEYHTCALTDSGEVY--AWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEG 410
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I + IA G + ++ S +++ G G G LGHGS P+ +E + L ++
Sbjct: 411 ISISSIACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRS 467
Query: 364 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V A G WH A + + G++ TWG G LGH + + VP V L D
Sbjct: 468 V--ACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVD 525
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ V+ G T ++ G V++ G + LG+ + D A V+ LKQ
Sbjct: 526 YDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD-----RAVVVEGM----LKQ 576
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
E V IS + H LT SG +Y +G G+ G+LG+ N+
Sbjct: 577 --EYVKMISCG-----SYHVAVLTSSGSVYTWGKGENGELGLGDTENR 617
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 289
E VQ + P+L+ES + V A+G A+++++G VY + G RLG +
Sbjct: 283 ERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDM 342
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
D+ ++ TL +I V +A G + AL SG VY+ G + DE
Sbjct: 343 -DISSPKIVDTLSDIRVKNVACGEYHTCALT--DSG-EVYA----WGNDVSCSDLVDEGR 394
Query: 350 PRLIEQFQLLNLQPV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
R L+L PV +A G WH A+V GR+ T+G G +G LGHG+ S
Sbjct: 395 IRSQWLTHKLSL-PVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSS 453
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIAD 452
PK V++L + VA G + T + E G ++++G + LGH AD
Sbjct: 454 PKEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGH---AD 510
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+ N L P V+ L V+ VQ+S + T ALT GK++A G+ GQL
Sbjct: 511 -----NVNKLVPTCVSQL--VDYDFVQVSCGRMM-----TLALTNMGKVFAMGSAKYGQL 558
Query: 513 G 513
G
Sbjct: 559 G 559
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 25/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ A+T G VY++G++ S + G +W + ++GI I A G T
Sbjct: 364 GEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHT 423
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
++S G+++ +G +FG +G + +SP+ VESLK + V A G + TA +
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGSYHS--FSSPKEVESLKGLCVRSVACGTWHTAAIIEI 481
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ G+++T+ ++ RLGH N + P + L + VQ++ G LA
Sbjct: 482 SAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLVDYDFVQVSCGRMMTLA 540
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVG 377
L + V+++G G+LG+ D R + +L + V +++ G++H AV+
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 593
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G V TWG G G LG G+ E P V+AL D + + G T +
Sbjct: 594 SSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAI 644
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 102/253 (40%), Gaps = 25/253 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ V+S G ++++G + G LGHG+ P+ + SL+G+ + A G
Sbjct: 414 SSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTW 473
Query: 208 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T I + G+++ +G G + KLV P V L + VQ
Sbjct: 474 HTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLV--PTCVSQLVDYDFVQV 531
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G T L+ G+V+ +LG+ H + V + G L+ V I+ G +
Sbjct: 532 SCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV---VVEGMLKQEYVKMISCGSYH 588
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 370
+ L S +VY+ G G G+LG G + P +E Q + P A
Sbjct: 589 VAVLT---SSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAIC 645
Query: 371 WHAAVVGQDGRVC 383
H + D C
Sbjct: 646 LHKPISISDQSSC 658
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 50/302 (16%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS ++ G ++SFG + G+LGHG + PRPI +L G I+ AAG +
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G +Y +G + +G+ G+ K T P + L+ +V+ G T VL G
Sbjct: 258 VDSQGALYTWGWNRYGQ--LGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGH 315
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VY+F + +LG + + ++P+ + L +N ++ IAAGY ++L L + VYS
Sbjct: 316 VYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKG---CVYS 372
Query: 331 VG------CGLGGKLGHGSR----------------------------TDEKH------- 349
G GLG +GH SR +D ++
Sbjct: 373 FGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNA 432
Query: 350 ---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
P+++E + V +AAG WH+A++ GR+ T+G G LG+ +E + +P +
Sbjct: 433 KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMPCI 492
Query: 407 VQ 408
V
Sbjct: 493 VN 494
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 168/373 (45%), Gaps = 40/373 (10%)
Query: 148 SQAIAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
S G H++AV + V S+G N GQLG G P PI L + AAG+
Sbjct: 141 SMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAGS 200
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++S G++++FG +FG +G + +P+ + +L +V A G +A +
Sbjct: 201 QHSFVLSKFGELFSFGCGTFGRLGHGNELPSF--NPRPISTLVGKHIVSVAAGLMHSAAV 258
Query: 267 SREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+G +YT+ W +LG HT PN + LE +V++ G + L L
Sbjct: 259 DSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKE------LERFNIVKVVCGKNHTLVLDV 312
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
VYS G + G+LG GS TD P I+ N + + +AAG +H ++ + G
Sbjct: 313 NGH---VYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGC 369
Query: 382 VCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
V ++G+ G LG G+ +S PK++ + ++ D Y G
Sbjct: 370 VYSFGYISDGALGLGDVVGHQSRPKLMPF------------SHFNHEFNDSIDSYKEIYG 417
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
E S N I N + L P++V ++ + V+I+ W H+ +T SG+
Sbjct: 418 EYNSDSENDI-----NNNNAKLPPKVVELHNEIGDVAVKIAAGG---W--HSAIITSSGR 467
Query: 501 LYAFGAGDKGQLG 513
LY FG GD +LG
Sbjct: 468 LYTFGLGDNFRLG 480
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 26/280 (9%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 294
++ P L++ + + V A G+ AVL + V SWG + +LG + N P
Sbjct: 127 IIKLPTLIK--QGLIVSMIACGDSHALAVLPNDATV--LSWGCNRWGQLGLGDQVNRCHP 182
Query: 295 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
P+ G ++IPV +AAG + L+ ++S GCG G+LGHG+ +PR I
Sbjct: 183 TPISGLSQSIPVF-VAAGSQHSFVLS---KFGELFSFGCGTFGRLGHGNELPSFNPRPIS 238
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
L+ V VAAG H+A V G + TWGW RYG LG G + ++P + L
Sbjct: 239 T--LVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFN 296
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ V G T V+ +G VYSFG LG + D ++ ++ LKQ N
Sbjct: 297 IVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTD-------SIKPNRIDLDLKQ-N 348
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ ++ I+ + Y+ H LT+ G +Y+FG G LG+
Sbjct: 349 DEIIDIA---AGYY--HVLLLTKKGCVYSFGYISDGALGL 383
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 16/288 (5%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 215
+I VT V++ G+N SG LG G T+ PR I L G +II + G G ++I+ A
Sbjct: 34 AIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATAD 93
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+VYA+G + + + G L +P LV + L V + + G+ T L+ +G VY
Sbjct: 94 GEVYAWGHNGYSQLGNGTTNHGL--TPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYA 151
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + N ++G + N P + L+N VV IA G L ++A +G Y G
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDNG-ETYGWGYN 208
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G+ +++ P I Q +N+ + VA G H + +G V +WG YG LG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQGINI--IQVACGYAHTLALTDEGFVYSWGANSYGQLG 266
Query: 395 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GN+ ++VP ++ + + +V A H + +T+ ++ G V +G
Sbjct: 267 TGNKSNQAVPTLINMDKERMVEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 21/287 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 211
GP H + T+ G VY++G N QLG+GTT P + + L G R+ + + G+ T+
Sbjct: 84 GP-HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 270
++ G+VYA+G ++ G+ G + +P+ V S L+N VV A G + + G
Sbjct: 143 LTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNG 200
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
Y + + + +LG N P + L+ I ++Q+A GY + LAL G VYS
Sbjct: 201 ETYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGINIIQVACGYAHTLALT--DEGF-VYS 256
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+++++ P LI + V + +A Q G+V WG R
Sbjct: 257 WGANSYGQLGTGNKSNQAVPTLI-NMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRG 315
Query: 391 GCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ + P + + +DV A AT T ++S DGD Y
Sbjct: 316 QAVAY--------PHLTHFTSTDDVFAC-FATPAVTWHLLSVDGDDY 353
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 206
++ G H+IA+T+ G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 131 TEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 190
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+M + D G+ Y +G + G+ G G + +P + +L+ I ++Q A G T L
Sbjct: 191 LCSMAVLDNGETYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGINIIQVACGYAHTLAL 248
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
+ EG VY++ + +LG + N + P L ++ +V++AA
Sbjct: 249 TDEGFVYSWGANSYGQLGTGNKSN--QAVPTLINMDKERMVEVAA 291
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 27/321 (8%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P +R ++ + +AA + ++D +V+A G + G G+ T+ P+ ++
Sbjct: 15 PEELRLIRQACVFGSAANEAIYVTVND--EVFALGTNCSGC--LGLGDTQSTIEPRRIDI 70
Query: 248 LKNIFVVQAAIGNF-FTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 304
L ++ + G + + +G VY +WG++ ++LG+ T + + P + L
Sbjct: 71 LCGKKIISLSYGTGPHVVIATADGEVY--AWGHNGYSQLGNGTTNHGLTPALVSTNLIGK 128
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V +++ G + +AL + VY+ G G++G GS ++ PR + L N V
Sbjct: 129 RVTEVSCGSHHTIALT---TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKVVV 184
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G + V +G WG+ G LG GN + P + AL + I VA G
Sbjct: 185 NIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAH 244
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T ++++G VYS+G L G GN+ +N P L+ K ER+V+++ +
Sbjct: 245 TLALTDEGFVYSWGANSYGQL-------GTGNK-SNQAVPTLINMDK---ERMVEVAACH 293
Query: 485 SIYWNAHTFALTESGKLYAFG 505
+ + +A A T+SG++ +G
Sbjct: 294 TSHTSA---AKTQSGQVLMWG 311
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P L+ L+ + V+ G+ H + DG V WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNHGLTPALVST-NLIGKRVTEVSCGSHHTIALTTDGEVYAWGY 154
Query: 388 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 444
G +G G+ + P+ V + L + +++A G + V ++G+ Y +G C
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLG 214
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+N GN+ TP + +L+ +N ++Q++ AHT ALT+ G +Y++
Sbjct: 215 LGNN------GNQQ----TPCRIAALQGIN--IIQVACGY-----AHTLALTDEGFVYSW 257
Query: 505 GAGDKGQLGIELVNNQTERGNPERVDID 532
GA GQLG N++ + P +++D
Sbjct: 258 GANSYGQLG---TGNKSNQAVPTLINMD 282
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 150/306 (49%), Gaps = 19/306 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H++ +T+ G VY+ GSN QLGH + + RP I L I Q A G+
Sbjct: 39 NQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK--RPLQIPELVDCVITQIACGSR 96
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M +++ GQV ++G + G+ + +V P+ V +L + VVQ A GN + L+
Sbjct: 97 HSMALTEWGQVLSWGDNECGQLGHA-SDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT 155
Query: 268 REGRVYTFSWGND--ARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALAC 321
G +Y +WG++ +LG T E LL TL IPV IA G + +L++
Sbjct: 156 CCGELY--AWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLIS--- 210
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
AV+ G G+LG T+ +P ++ + L ++ VA G + + +G
Sbjct: 211 --KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGG 266
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCG 440
V T G G YG LGHG E +P++V L VA G+ +T +V G +Y FG G
Sbjct: 267 VFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLG 326
Query: 441 ESASLG 446
S LG
Sbjct: 327 SSGQLG 332
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 52/365 (14%)
Query: 166 VYSFGSNSSGQLGHGTTEEE---------WRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
+Y +G+ S GQLG G E+E W+P + Q A G T+ ++ +G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSA-------VNQIACGHRHTLFLTASG 55
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+VYA G + + + + + + + P+LV+ + + Q A G+ + L+ G+V S
Sbjct: 56 KVYACGSNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQV--LS 109
Query: 277 WGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
WG++ +LGH ++ + V+ + L + VVQIA G + LAL C +Y+ G
Sbjct: 110 WGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGE---LYAWGSN 166
Query: 335 LGGKLGHGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
+ G+LG + ++ P L+ LL + +A G H+ ++ + V +GWGR
Sbjct: 167 IYGQLGVKTPSELGQCNAPMLLTT--LLGIPVRAIACGGNHSFLISKSSAV--FGWGRNN 222
Query: 392 C--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
C LG +E + P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGF 282
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGD 508
N + P++V L + + Q++ N HT A+ + G++Y FG G
Sbjct: 283 C--------GNEMLPRMVMEL--MGSTISQVACGNR-----HTLAMVPARGRIYGFGLGS 327
Query: 509 KGQLG 513
GQLG
Sbjct: 328 SGQLG 332
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 13/265 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 206
+Q G HS+A+T G V S+G N GQLGH + ++ + P+ +R+L ++Q A G
Sbjct: 89 TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGN 148
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV---TSPQLVESLKNIFVVQAAIGNFFT 263
++ ++ G++YA+G + +G+ GV+ + +P L+ +L I V A G +
Sbjct: 149 NHSLALTCCGELYAWGSNIYGQL--GVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHS 206
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
++S+ V+ + N +LG + E N P L TL + V +A G + + L +
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEG 265
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRV 382
V++ G G G+LGHG +E PR++ +L+ VA G H A+V GR+
Sbjct: 266 ---GVFTCGAGAYGQLGHGFCGNEMLPRMV--MELMGSTISQVACGNRHTLAMVPARGRI 320
Query: 383 CTWGWGRYGCLGHGNEECESVPKVV 407
+G G G LG N + ++P++V
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQMV 345
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGR 381
M +Y G G+LG G DE+ I + QP +A G H + G+
Sbjct: 1 MELYCWGNASHGQLGLGGIEDEQ----ILTPSKMPWQPDSAVNQIACGHRHTLFLTASGK 56
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V G Y LGH E P + L D +A G + ++E G V S+G E
Sbjct: 57 VYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNE 114
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LGH + D V P+ V +L V++ VVQI+ N+ H+ ALT G+L
Sbjct: 115 CGQLGHASDQDV-------VQLPKTVRAL--VSKTVVQIACGNN-----HSLALTCCGEL 160
Query: 502 YAFGAGDKGQLGIE 515
YA+G+ GQLG++
Sbjct: 161 YAWGSNIYGQLGVK 174
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+AIA G HS ++ V+ +G N+ GQLG P +++L+ + + A G
Sbjct: 197 RAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDE 256
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
++ +++ G V+ G ++G+ +G G +++ P++V L + Q A GN T A++
Sbjct: 257 FSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML--PRMVMELMGSTISQVACGNRHTLAMV 314
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y F G+ +LG + P ++G
Sbjct: 315 PARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIG 347
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
+ Q A G+ ++ + ++++ G LG T + EP L+ +E G
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLI--IEKKDYTYFIEG 348
Query: 313 Y-CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
C C + + G G GG+LGHG D P+ I + L +P+ ++AG
Sbjct: 349 IACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEI--YDLSKKKPIFISAGES 406
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H+A + + + TWG G YG LGHG + E PK+++ L+ + IHV+ G + T ++
Sbjct: 407 HSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ 466
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYW 488
G VY+FG G+ LG N + R P+ ++ K + E +VQ +I
Sbjct: 467 GTVYAFGQGKYGKLGIN-----RKQREGVFSRPEKISFYKVGVEPQEMLVQ-DKNEAILA 520
Query: 489 NA---HTFALTESGKLYAFGAGDKGQLG 513
A H+ L +SGK+Y++G KG LG
Sbjct: 521 AAGYNHSLCLAKSGKIYSWGYNGKGLLG 548
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR-LIEQFQLLNLQP 363
P+ Q+A G ++LA+ ++S G G G LG G+R D PR LI + +
Sbjct: 290 PITQVACGSAHILAIT---EDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFI 346
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+A G +H+ + + ++ TWG G+ G LGHG+E+ VPK + L+ K I ++ G+
Sbjct: 347 EGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGES 406
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ +SE ++Y++G G LGH + P+L+ L Q ++ +S
Sbjct: 407 HSAAISEKLNLYTWGTGTYGRLGHGMDTSEK--------KPKLIEDLDQY--EIIHVSCG 456
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT A+T G +YAFG G G+LGI + PE++
Sbjct: 457 A-----FHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKI 497
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 181/427 (42%), Gaps = 62/427 (14%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQA-AA 204
+Q G H +A+T ++S+GS G LG GT ++ + PR I I+ A
Sbjct: 292 TQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIAC 351
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G +M ++ ++ +G+ G +G + LV P+ + L + + G +A
Sbjct: 352 GKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLV--PKEIYDLSKKKPIFISAGESHSA 409
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+S + +YT+ G RLGH + ++ +P L+ L+ ++ ++ G + LA+ Q +
Sbjct: 410 AISEKLNLYTWGTGTYGRLGHGMDTSEKKP-KLIEDLDQYEIIHVSCGAFHTLAITGQGT 468
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE---KHPRLIEQFQLLNLQP-----------VVVAAGA 370
VY+ G G GKLG + E P I F + ++P ++ AAG
Sbjct: 469 ---VYAFGQGKYGKLGINRKQREGVFSRPEKIS-FYKVGVEPQEMLVQDKNEAILAAAGY 524
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGH--GNEE-------------CESVPKVVQALN--DV 413
H+ + + G++ +WG+ G LG G EE +P + + + D+
Sbjct: 525 NHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDL 584
Query: 414 K--------AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
K I VA G T ++ G+VY FG L + D R
Sbjct: 585 KQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKD--KDQTTFRKYKKQDQN 642
Query: 466 LVTSLKQVNERVVQISL-------TNSIYWNA----HTFALTESGKLYAFGAGDKGQLGI 514
Q + Q+SL T I + A H FA++ +L+ +G D+GQLG+
Sbjct: 643 NNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGL 702
Query: 515 ELVNNQT 521
V++ T
Sbjct: 703 GFVSDFT 709
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 176/434 (40%), Gaps = 61/434 (14%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
+L+ R L E E Q G +++++T+ G VY FGSN+ GQL + +R
Sbjct: 577 ELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKY 636
Query: 190 PIRSLQG------------------------IRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+ +RI A G IS +++ +G++
Sbjct: 637 KKQDQNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRND 696
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG- 284
G+ G + P L+ + + + A G+ ++A +S G ++ + +LG
Sbjct: 697 EGQLGLGFV-SDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGL 755
Query: 285 -HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ------PSGMAVYSVGCGLGG 337
+ + L+ L P+ +A G ++LA+A GM YS G G
Sbjct: 756 GQALKKGFLLSFTLIQNLA--PIKSVACGPNHMLAIADYNPDHPIKDGMC-YSWGRNWKG 812
Query: 338 KLGHGSRTDEKHPRLI----EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
+LG GS+ D P+ I E+F+ VA G + + +V WG +Y C
Sbjct: 813 QLGIGSKEDSNVPKKIHNAKERFK-------KVACGQDFSIGLTYGNQVYLWGNNKYFCD 865
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
++ + +P+++QAL + +A V+++ G++ +G + + N D
Sbjct: 866 SKITKDVD-IPQLLQALEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDK 924
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ H + +++ + + IS + H+ A++ LY +G + G+LG
Sbjct: 925 KSQNHLAITK----FPMRKFDFLMETISAGQN-----HSAAVSVKRSLYTWGHAEGGRLG 975
Query: 514 IELVNNQTERGNPE 527
+ N+ E N +
Sbjct: 976 L----NEKEYKNAK 985
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 25/285 (8%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+N Q IA G +S AV++ G ++ G+ +G+LG G ++ +Q + I++ A
Sbjct: 721 KNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVA 780
Query: 205 -GAGRTMLISD--------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G + I+D G Y++G++ G+ G+ + P+ + + K F +
Sbjct: 781 CGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQL--GIGSKEDSNVPKKIHNAKERFK-K 837
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A G F+ L+ +VY WGN+ DV+ LL LE + IA Y +
Sbjct: 838 VACGQDFSIGLTYGNQVYL--WGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKF 895
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVV--VAAGAW 371
L + + G L ++ + D+K I +F + ++ ++AG
Sbjct: 896 CSVLNDKGE---ILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQN 952
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESV---PKVVQALNDV 413
H+A V + TWG G LG +E ++ P +VQ+++D+
Sbjct: 953 HSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHDI 997
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 147/379 (38%), Gaps = 71/379 (18%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG------------- 196
A AG HS+ + G +YS+G N G LG EE P I + G
Sbjct: 520 AAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELI 579
Query: 197 ------------IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL------ 238
+IQ A G T+ +++ G+VY FG +++G+ T
Sbjct: 580 QRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQ 639
Query: 239 -----VTSPQLVESLKNIFVVQ-----------AAIGNFFTAVLSREGRVYTFSWGNDAR 282
+ Q ++S + + +++ A G +SR ++ + ++ +
Sbjct: 640 DQNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQ 699
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LG + L+ + + + IA G Y A++ + ++ G GKLG G
Sbjct: 700 LGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVS---AFGELFVTGNLENGKLGLG 756
Query: 343 SRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVG--------QDGRVCTWGWGRYGCL 393
K L+ + NL P+ VA G H + +DG +WG G L
Sbjct: 757 QAL--KKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQL 814
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G++E +VPK + + + VA G + ++ VY +G + D
Sbjct: 815 GIGSKEDSNVPKKIHNAKE-RFKKVACGQDFSIGLTYGNQVYLWG-------NNKYFCDS 866
Query: 454 QGNRHANVLTPQLVTSLKQ 472
+ + ++ PQL+ +L+Q
Sbjct: 867 KITKDVDI--PQLLQALEQ 883
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 7/296 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G H++ + + V+S G NS GQLG P P+++L+ ++ + G
Sbjct: 27 QAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+ +V FSWG ++ +LG E + + +LE IPV Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSF 203
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G + P I + NL + ++ G H AV+ QDG+V T+G
Sbjct: 204 GWGSNSAGQLALSGRNVQVQSNKPLSIGALK--NLGVIYISCGDEHTAVLSQDGKVFTFG 261
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
G LG+ + P++V+ ++ + + GD+T V G V SFG G S
Sbjct: 262 DNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGHGPS 317
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + + SPQ V SL+ I V Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKELSS-QASPQRVRSLEGIPVAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+F WG++ A G + + +P + G L+N+ V+ I+ G + L+
Sbjct: 202 --SFGWGSNSAGQLALSGRNVQVQSNKPLSI-GALKNLGVIYISCGDEHTAVLS---QDG 255
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG+ ++ P+++E+ L Q + G A V G+V ++G
Sbjct: 256 KVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQ--IDCGGDHTIAYVHTTGQVVSFG 313
Query: 387 WGRYGCLG----HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G +E + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 32/319 (10%)
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G ++QAA+G +L+ V++ G++S G+ G +G P+ V++LK +
Sbjct: 22 GAELLQAASGERHALLLLTNSSVHSCGENSRGQ--LGRRGAPRGDLPEPVQALKTLKFNL 79
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 314
+ G + + +GRV+ + G++ +LG E ++ P + TL I ++Q++ G+
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEINFTPKKITTLTGIKIIQVSCGHY 138
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVV-VAAGAWH 372
+ LAL+ V+S G G+LG G + + P+ + + + PV VAAG H
Sbjct: 139 HSLALS---KDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI---PVAQVAAGGAH 192
Query: 373 AAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
+ + G WG G L G + + P + AL ++ I+++ GD T V+S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+DG V++FG S LG+N +G PQ+V ++++ V QI
Sbjct: 253 QDGKVFTFGDNSSGQLGYNPTPKKRG--------PQIV---ERIDGLVSQIDCGGD---- 297
Query: 490 AHTFALTE-SGKLYAFGAG 507
HT A +G++ +FG G
Sbjct: 298 -HTIAYVHTTGQVVSFGHG 315
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G +L V++ + +LG P P P+ L+ + ++ G
Sbjct: 25 LLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPV-QALKTLKFNLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEINFTPKKITT--LTGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVQVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L++ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERID 286
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T ++S G+V+ FG +S G+ Y K PQ+VE + + G+ A
Sbjct: 244 GDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKK--RGPQIVERIDGLVSQIDCGGDHTIA 301
Query: 265 VLSREGRVYTFSWG 278
+ G+V +F G
Sbjct: 302 YVHTTGQVVSFGHG 315
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 11/302 (3%)
Query: 151 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAGA 206
IAG +AV K G V++ G N SGQ G+GT EE P+R+L GI I + AA G
Sbjct: 507 IAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGC 566
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAV 265
+ ++ G VY++G + G+ G +K T P++++SL+ + + AA+ +AV
Sbjct: 567 EHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSYHHSAV 625
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+S G + F + +LG + P L+ +L + + ++A G + +A+ SG
Sbjct: 626 VSSNGELLMFGMNDCGQLGLDHTQHQHTPQ-LVDSLSSQVITEVACGLYHTIAIT---SG 681
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
VYS G G+LG G + K P L++ + + V V+ G +H + + G++ T
Sbjct: 682 GEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLIT 741
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG YG LG G+++ ++ + V K + G Y T ++ +G V FG
Sbjct: 742 WGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQ 801
Query: 445 LG 446
LG
Sbjct: 802 LG 803
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 158/322 (49%), Gaps = 36/322 (11%)
Query: 206 AGRT-MLIS----DAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQL-VESLKNIFVVQAA 257
AGRT L+S D ++++ G++++GE G +KL P +++++I A
Sbjct: 454 AGRTERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDI-----A 508
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--GYCY 315
GN AV+ ++G V+T + G+ T V + L I + +AA G +
Sbjct: 509 GGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEH 568
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAA 374
+LA+A S AVYS G G+LG GS + H PR+I+ + A H+A
Sbjct: 569 MLAVA---SDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KYHITTAAVSYHHSA 624
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
VV +G + +G G LG + + + P++V +L+ VA G Y T ++ G+V
Sbjct: 625 VVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEV 684
Query: 435 YSFGCGESASLGHNAIADGQGNRHA-NVLTPQLV-TSLKQVNERVVQISLTNSIYWNAHT 492
YSFG + LG HA N+ P LV TSL + +E++V +S Y+ HT
Sbjct: 685 YSFGKNDYGQLGLG---------HARNMKVPTLVKTSLGESDEKIVAVSCG---YY--HT 730
Query: 493 FALTESGKLYAFGAGDKGQLGI 514
++E GKL +G D GQLGI
Sbjct: 731 VTISEKGKLITWGRNDYGQLGI 752
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 19/290 (6%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSL-QGIRIIQAAAGAG 207
A G H +AV S G VYS+G N GQLG G+T + PR I SL + I AA
Sbjct: 562 AANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 621
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++S G++ FG + G + G+ T+ +PQLV+SL + + + A G + T ++
Sbjct: 622 HSAVVSSNGELLMFGMNDCG--QLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT 679
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 325
G VY+F + +LG N P + +L + +V ++ GY + + ++
Sbjct: 680 SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTIS---EK 736
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVC 383
+ + G G+LG GS+ D K+ Q+ L L + A G +H ++ +GRV
Sbjct: 737 GKLITWGRNDYGQLGIGSK-DHKNS---AQYVPLPLSSKIKTASCGCYHTLILMSNGRVM 792
Query: 384 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVS 429
+G G LG G+ S +P +L + + + +A G Y++++++
Sbjct: 793 VFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 842
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 20/238 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS V+S G + FG N GQLG T+ + P+ + SL I + A G T+ I+
Sbjct: 622 HSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSG 681
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL---KNIFVVQAAIGNFFTAVLSREGRV 272
G+VY+FGK+ +G + G+ + + P LV++ + +V + G + T +S +G++
Sbjct: 682 GEVYSFGKNDYG--QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKL 739
Query: 273 YTFSWGNDARLG----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
T+ + +LG H P PL ++ A+ CY + + V
Sbjct: 740 ITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMV 793
Query: 329 YSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVC 383
+ G G+LG GSRT P + L N + V +AAG + + ++ G+ G C
Sbjct: 794 F--GRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGC 849
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQAAAGAGRTMLI 212
H+IA+TS G VYSFG N GQLG G P +++ G +I+ + G T+ I
Sbjct: 674 HTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTI 733
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S+ G++ +G++ +G+ G + K S Q V + + A+ G + T +L GRV
Sbjct: 734 SEKGKLITWGRNDYGQLGIGSKDHK--NSAQYVPLPLSSKIKTASCGCYHTLILMSNGRV 791
Query: 273 YTFSWGNDARL--GHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
F N +L G T P+ P P+ +L N VV+IAAG+ Y + SG
Sbjct: 792 MVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGF-YSSYILTGRSGE--- 847
Query: 330 SVGCGLGG 337
GCGL G
Sbjct: 848 --GCGLDG 853
>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
Length = 440
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 162/354 (45%), Gaps = 31/354 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT---EEEWRPRPIRSLQGIRIIQAAAG 205
Q +G H++A++ G VY++G N G LG TT EEE++P + + I+ +AG
Sbjct: 83 QVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAG 142
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T +SD G VYA+G + G+Q + P ++ + ++ +++ A GN TA
Sbjct: 143 DSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAA 202
Query: 266 LSREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLLGTLENIPVVQIAAGYC 314
L+ G ++T +LG E +EP L+ + + + + G
Sbjct: 203 LTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEP-ALVRSKKGLKFKDVFCGSF 261
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL----QPVVVAAGA 370
+A +G VY+ G G+LG G P ++ LN + + +A G
Sbjct: 262 ATFVVA--KTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQ 319
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVS 429
H V +G+V G YG LG G+ E+ +P + +L++ VA G+ +F VS
Sbjct: 320 HHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFAVS 379
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQIS 481
+ G++YS+G G LG+ GN +V TP V +L RV+ +S
Sbjct: 380 DKGELYSWGMGSCLQLGN-------GNDEDDVTTPAKVQGKNLNSETHRVLGVS 426
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 180/394 (45%), Gaps = 56/394 (14%)
Query: 164 GVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY--- 219
G + G GQLG G T E +P L+G+ I+Q +G T+ +S G+VY
Sbjct: 45 GQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYTWG 104
Query: 220 -----AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
A G+++ E E Q P +V ++ +V + G+ TA LS +G VY
Sbjct: 105 CNDDGALGRETTSEGEEEFQ-------PGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYA 157
Query: 275 FSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ DA +P+ V+ P ++ T E+ +++IA+G + AL + ++++GC
Sbjct: 158 WGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALTTSGN---LFTLGC 214
Query: 334 GLGGKLG--------HGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 381
G+LG G R + P L+ + L + V G++ VV + G
Sbjct: 215 AEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVF--CGSFATFVVAKTGSD 272
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDV------KAIHVATGDYTTFVVSEDGDVY 435
V WG YG LG G+ + P V++L+ + K I +A G + T V +G VY
Sbjct: 273 VYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVY 332
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
+ G + LG + DG P +TSL NE + +++ + +FA+
Sbjct: 333 ALGRADYGRLG---LGDGA----KETALPAHITSLD--NEVIEKVACGECV-----SFAV 378
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
++ G+LY++G G QLG N++ + P +V
Sbjct: 379 SDKGELYSWGMGSCLQLGNG--NDEDDVTTPAKV 410
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
++GQ G+ G+ G T P + L+ + +VQ G T LS++G+VY
Sbjct: 43 ESGQALTLGQGDVGQLGLGPD-TLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101
Query: 274 TFSWGNDARLGHH-TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
T+ +D LG T + E P ++ +++ +V ++AG + AL+ Q + VY+
Sbjct: 102 TWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGT---VYAW 158
Query: 332 GC--GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G++G +K P +I + + + +A+G H A + G + T G
Sbjct: 159 GTYRDASGQIGLQPDGVKKKPAVILTSESDRI--IKIASGNDHTAALTTSGNLFTLGCAE 216
Query: 390 YGCLGHGNEECESV------------PKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYS 436
G LG +EC S P +V++ +K V G + TFVV++ G DVY+
Sbjct: 217 QGQLGR-VKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYA 275
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFA 494
+G LG + P V SL Q+N E+ I++ N + HT
Sbjct: 276 WGLNNYGQLGTGDVQTWH--------FPVKVKSLSQLNKSEKDKHITIANGQH---HTIV 324
Query: 495 LTESGKLYAFGAGDKGQLGI 514
+GK+YA G D G+LG+
Sbjct: 325 CDPNGKVYALGRADYGRLGL 344
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G+ T G G G LG G + E P V L V + V +G T +S+DG VY+
Sbjct: 43 ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 102
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+GC + +LG ++G+ P +V+ VN +V +S +S HT AL+
Sbjct: 103 WGCNDDGALGRETTSEGE-----EEFQPGVVSMPDDVN--IVMVSAGDS-----HTAALS 150
Query: 497 ESGKLYAFGA--GDKGQLGIE 515
+ G +YA+G GQ+G++
Sbjct: 151 DQGTVYAWGTYRDASGQIGLQ 171
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 42/365 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N SG LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N V+ IA G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESA 443
YG LG GN+ +S P V D + A H A +T+ ++ G VY +G C G+S
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSV 342
Query: 444 SLGHN 448
L H+
Sbjct: 343 ILPHH 347
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Query: 277 W--GNDARLGHHT 287
G L HHT
Sbjct: 336 QCRGQSVILPHHT 348
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
Length = 918
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 155/334 (46%), Gaps = 44/334 (13%)
Query: 147 NSQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
NS+ ++ G +AV + G +Y +G+NS GQLG G + PR +++L G + A
Sbjct: 14 NSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACS 73
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------------------------VT 240
T+ D G YA+G G G+ G + V
Sbjct: 74 QEHTVCCLDDGSAYAWGCALNG--RLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVC 131
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLS----REGRVYTFSWGNDARLGHHTEPNDVEPHP 296
+P+++ESL F+ A G + +A L ++T G + RLGH E + P
Sbjct: 132 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 191
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQ 355
+ LEN+ + IA G + AC S +Y+ G GKLG GS R + P+ +
Sbjct: 192 VH-ALENVNITAIACGAHH---TACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSG 247
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALNDV 413
L N V VA G+ H+A V DG + TWG GR LGH E E +P+ V+AL +
Sbjct: 248 -PLRNKAVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEILPRRVEALLGL 304
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
IHV GD T + E+G+V+++G S LGH
Sbjct: 305 FVIHVVCGDAHTACIVENGNVWAWGT--SRILGH 336
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 48/346 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR + +L+ I + +AG + +++ +G++Y +G +S E + G + + P+LV++
Sbjct: 4 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANS--EGQLGTGDRRDASVPRLVKA 61
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-------------TEPNDVEP 294
L V A T +G Y + + RLG H + P
Sbjct: 62 LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARP 121
Query: 295 HPLLGTLE--NIPVVQIAAGYCYLLALACQP-----------SGMAVYSVGCGLGGKLGH 341
PL V++ GY ++ +AC P ++++ G GL G+LGH
Sbjct: 122 EPLASACAVCTPRVLESLCGY-FIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGH 180
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-C 400
G D P + + +N+ +A GA H A V G + TWG +G LG G+
Sbjct: 181 GDEEDRHLPTAVHALENVNI--TAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGS 238
Query: 401 ESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 459
+ +PK V L + + VA G + V+ DG++Y++G G LGH QG +
Sbjct: 239 QLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEV----QG--ES 290
Query: 460 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
+ + P+ V E ++ + + + + +AHT + E+G ++A+G
Sbjct: 291 DEILPRRV-------EALLGLFVIHVVCGDAHTACIVENGNVWAWG 329
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 51/324 (15%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
+ SP+LV++LKNI + + G AV++ G +Y + ++ +LG + P L+
Sbjct: 1 MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPR-LV 59
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------ 340
L V +A C C + Y+ GC L G+LG
Sbjct: 60 KALHGKVVKAVA---CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 116
Query: 341 HGSRTDEKH-------PRLIEQFQLLNLQPVVVAAGAWHAAVVG---QD-GRVCTWGWGR 389
G+R + PR++E L VA G +H+A +G QD + T G G
Sbjct: 117 TGARPEPLASACAVCTPRVLES--LCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL 174
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LGHG+EE +P V AL +V +A G + T V+ G +Y++G L
Sbjct: 175 NGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKL---- 230
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
G G+ + L P+ V+ + N+ VV ++L + H+ +T G+LY +G G +
Sbjct: 231 ---GLGSTRGSQLLPKHVSGPLR-NKAVVSVALGSQ-----HSACVTTDGELYTWGQGRR 281
Query: 510 GQLGIELVNNQTERGNPERVDIDL 533
LG E V +++ P RV+ L
Sbjct: 282 --LGHE-VQGESDEILPRRVEALL 302
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 109 IFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHS----IAVTSKG 164
+F P T A + L C VL E+ C + GP HS I +
Sbjct: 112 VFSPATGARPEPLASACAVCTPRVL------ESLCGYFIADVACGPYHSAFLGIYEQDRT 165
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
+++ G +G+LGHG E+ P + +L+ + I A GA T ++ AG +Y +G
Sbjct: 166 SLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGA 225
Query: 225 SFGEAEYG-VQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
+FG+ G +G++L+ P+ V L+N VV A+G+ +A ++ +G +YT WG R
Sbjct: 226 AFGKLGLGSTRGSQLL--PKHVSGPLRNKAVVSVALGSQHSACVTTDGELYT--WGQGRR 281
Query: 283 LGHHT--EPNDVEPH 295
LGH E +++ P
Sbjct: 282 LGHEVQGESDEILPR 296
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 21/250 (8%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLIS----DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
PR + SL G I A G + + D ++ G G +G + + + P
Sbjct: 133 PRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHL--PT 190
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLE 302
V +L+N+ + A G TA ++ G +YT+ +LG T + + P + G L
Sbjct: 191 AVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLR 250
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQFQLLN 360
N VV +A G + AC + +Y+ G G +LGH +DE PR +E LL
Sbjct: 251 NKAVVSVALGSQHS---ACVTTDGELYTWGQGR--RLGHEVQGESDEILPRRVEA--LLG 303
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVA 419
L + V G H A + ++G V W WG LGHG+ E + P ++ALN + ++
Sbjct: 304 LFVIHVVCGDAHTACIVENGNV--WAWGTSRILGHGDPEVPPNRPACLRALNGKGVVQLS 361
Query: 420 TGDYTTFVVS 429
+TF V+
Sbjct: 362 CA--STFTVA 369
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 190/448 (42%), Gaps = 87/448 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS + +GV+Y++GS G+LGHG E PR + G+ ++Q A G T+
Sbjct: 311 AGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLA 370
Query: 212 ISDAGQVYAFGKD---SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ G V+A+G FGE E G G +V P+ + ++ V+ A G + +A ++
Sbjct: 371 LTHKGTVFAWGAGLALGFGEGEDGSGG--MVAVPKHLSDIEAA-VLNIAAGPYHSAAVTV 427
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLEN----------IPVVQIAAGYC--- 314
G + + G +RLGH + N +P P + L N + V ++ Y
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQN--QPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLD 485
Query: 315 ---------------YLLALACQPS-------GMAVYSVGCGLGGKLGHGS--RTDEKHP 350
L +L C S AV+ G G+LG G D+ P
Sbjct: 486 VLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEP 545
Query: 351 RLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+E F P+ +A G+ H V Q G V WG G LG G P V A
Sbjct: 546 VKLECFS----TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTA 601
Query: 410 LNDVKAIHVATGD-YTTFVVS-------------EDGDVYSFGCGESASLGHNAIADGQG 455
L +A+ V GD Y+ + S E GD++++G ES LG G+
Sbjct: 602 LR--QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL-----GED 654
Query: 456 NRHANVLTPQLVT-----------SLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
++LTPQ V SL+ Q +RV +S + +H+ A+T G+ YA
Sbjct: 655 VASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYA 714
Query: 504 FGAGDKGQLGIELVNNQTERGNPERVDI 531
+GAG G+LGI N P R D
Sbjct: 715 WGAGYYGRLGIGTTANAY---TPTRCDF 739
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 179/419 (42%), Gaps = 61/419 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-----------RSLQGIRIIQ 201
G H++A++ +G +Y++G S G LG G T + + P + + G+ ++
Sbjct: 189 GADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVR 248
Query: 202 A--------AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
A +AGA +M + G ++ +G G G+ + SP +V+ + + +
Sbjct: 249 ADPVVVTCCSAGAKHSMACTSDGTLWTWGHG--GNGRLGLGHNRGSLSPAVVDYILDRDI 306
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V G+ +A + R+G +YT+ G RLGH + P + G +PV+Q+A G
Sbjct: 307 VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGT 365
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAW 371
+ LAL + + V++ G GL LG G D + L +++ V +AAG +
Sbjct: 366 FHTLALTHKGT---VFAWGAGLA--LGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPY 420
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVV 428
H+A V G + WG G LGHG+++ + PK V L + V + G
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480
Query: 429 SEDGDVY----------------SFGCGESASL---GHNAI------ADGQGNRHANVLT 463
D DV S CGES ++ G A+ DGQ +V
Sbjct: 481 YSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEE 540
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
Q + V + + H A+ + G ++A+GA D GQLG+ +V E
Sbjct: 541 DQ----YEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFE 595
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 76/379 (20%)
Query: 164 GVVYSFGSNSSGQLGH----------------GTTEEE---W---RPRPIRSLQGIRIIQ 201
G VY+FG + G+LG+ G +E+ W +P +R +I +
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIAR 185
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ GA T+ +SD G +YA+G S+G + Q +
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGN------------------------LGQGDTSDS 221
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+T V RVY G++A G E V G + PVV ++AC
Sbjct: 222 YTPV-----RVYL---GSEAGSGKKKENVGV------GKVRADPVVVTCCSAGAKHSMAC 267
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
G +++ G G G+LG G P +++ +L+ V V AG H+A + + G
Sbjct: 268 TSDG-TLWTWGHGGNGRLGLGHNRGSLSPAVVDY--ILDRDIVFVNAGDSHSACIDRQGV 324
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ TWG G +G LGHG++ VP+ V+ V + VA G + T ++ G V+++G G
Sbjct: 325 LYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG- 383
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+LG DG G +V K +++ ++ ++ N H+ A+T G L
Sbjct: 384 -LALGFGEGEDGSGG---------MVAVPKHLSD--IEAAVLNIAAGPYHSAAVTVGGDL 431
Query: 502 YAFGAGDKGQLGIELVNNQ 520
+G G +LG NQ
Sbjct: 432 LVWGVGGSSRLGHGDQQNQ 450
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 168/415 (40%), Gaps = 74/415 (17%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A TS G ++++G +G+LG G P + + I+ AG +
Sbjct: 259 AGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSAC 318
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G +Y +G FG +G QG + P+ VE + V+Q A G F T L+ +G
Sbjct: 319 IDRQGVLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGT 376
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVY 329
V F+WG LG E G + +P + I A +L +A P A
Sbjct: 377 V--FAWGAGLALGFG------EGEDGSGGMVAVPKHLSDIEAA---VLNIAAGPYHSAAV 425
Query: 330 SVG-----CGLGG--KLGHGSRTDEKHP----------------------RLIEQFQLLN 360
+VG G+GG +LGHG + ++ P RL ++ L+
Sbjct: 426 TVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLD 485
Query: 361 LQPVVVAAG----AW----------HAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVP 404
+ V +G +W H + G V WG G LG G EE + P
Sbjct: 486 VLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEP 545
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
++ + +A G V++ GDV+++G ++ LG + P
Sbjct: 546 VKLECFS-TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS--------FEP 596
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFAL-----TESGKLYAFGAGDKGQLGI 514
VT+L+Q + + I ++ TE G L+A+GA + G+LG+
Sbjct: 597 AAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 150/381 (39%), Gaps = 49/381 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTML 211
G H+IA+T G V+ +GSN GQLG G EE + P++ I + A G+ +
Sbjct: 508 GESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLA 567
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G V+A+G + G+ GV + P V +L+ V G+ ++A ++ G
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGV--VRPSFEPAAVTALRQ--AVDVFCGDDYSACITSLGG 623
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+ S G E L G E++ I L Q +V
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKL-GLGEDVASGSI---------LTPQKVVFSVPVC 673
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
C L D + ++ ++ P+ +G H+ + G WG G YG
Sbjct: 674 ACSL----------DSLEMQAYKRVFCVSFSPL--CSGTSHSLAITAQGECYAWGAGYYG 721
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G P V+ VA G + +S DGD++ +G E
Sbjct: 722 RLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC------- 774
Query: 452 DGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
N ++P++ L+ +V IS + H+ A+TE+G+++A+G
Sbjct: 775 -----STTNYMSPRIFMQLEGQGGVPKVKSISASER-----HSLAVTEAGEVFAWGDNKL 824
Query: 510 GQLGIELVNNQTER-GNPERV 529
Q G Q ER PERV
Sbjct: 825 YQTGCG--KRQAERLDRPERV 843
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 49/332 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +AV G V+++G+N +GQLG G + P + +L+ + + G + I
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACI 618
Query: 213 SDAGQVYAFGKDS---------FGEAEYGVQG------TKLVTSPQLV------------ 245
+ G + ++ +G AE G G + + +PQ V
Sbjct: 619 TSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLD 678
Query: 246 ----ESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
++ K +F V + G + ++ +G Y + G RLG T N P
Sbjct: 679 SLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTP-TRC 737
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
+ + + +AAG C+ LAL+ G + G + S T+ PR+ Q +
Sbjct: 738 DFPKGVRLRSVAAGACHSLALSMD--GDLWF-----WGRREDTCSTTNYMSPRIFMQLEG 790
Query: 359 LNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 414
P V ++A H+ V + G V WG + G G + E + P+ V L
Sbjct: 791 QGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSA- 849
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
VATG +F + G+V++ G +S LG
Sbjct: 850 CQWVATGPQGSFFILASGEVFAAGVIKSGRLG 881
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+T++G Y++G+ G+LG GTT + P +G+R+ AAGA ++
Sbjct: 698 SGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLA 757
Query: 212 ISDAGQVYAFGK 223
+S G ++ +G+
Sbjct: 758 LSMDGDLWFWGR 769
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 42/365 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 26 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 60
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N SG LG G + PR + SL G +I + G+G
Sbjct: 61 GSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHI 120
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 121 VLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSD 179
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N V+ IA G + ++A +G VY
Sbjct: 180 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVY 236
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG
Sbjct: 237 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANS 294
Query: 390 YGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESA 443
YG LG GN+ +S P V D + A H A +T+ ++ G VY +G C G+S
Sbjct: 295 YGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSV 351
Query: 444 SLGHN 448
L H+
Sbjct: 352 ILPHH 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 226 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 285
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 286 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 344
Query: 277 W--GNDARLGHHT 287
G L HHT
Sbjct: 345 QCRGQSVILPHHT 357
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 129 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 187
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 188 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 247
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 248 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 292
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 293 NSYGQLGTGNKSNQS 307
>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 166/357 (46%), Gaps = 39/357 (10%)
Query: 148 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L ++ AA G
Sbjct: 56 SCVVSGPCAAHSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACG 115
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T+ ++D G VY+FG++ G+ G Q T V SP L+ S +V+ A G F+ V
Sbjct: 116 RNHTLALTDDGSVYSFGENKLGQLGQGSQ-TYAVLSPALI-SYDGQPLVKVACGAEFSMV 173
Query: 266 LSREGRVYTFSWGNDARLGHHTEPN------------DVEPHPLLGTLENIPVVQIAAGY 313
+ +G +Y+F +LGH+++ ++ P + +E Q+
Sbjct: 174 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVP 233
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+L L Q V+S G G G+LGH + DE PRLI+ F + G +
Sbjct: 234 NVVLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRGASQIYTGYQCS 290
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
V ++G + WG + + + E PKVV L K +A G ++ +++ D
Sbjct: 291 FAVSENGGLFFWG------VTNTSRESTMYPKVVPDLCGWKIRSLACGK-SSIIIAADES 343
Query: 434 VYSFG----CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
++G CGE LG+ N+ + T Q V +L V V + ++S+
Sbjct: 344 TITWGPSPTCGE---LGYG------DNKPKSSTTAQEVKTLDGVYVEKVMMGYSHSL 391
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
VV A H+ ++ +G++ +WG G LGHG+ + PK+++ L D + A G
Sbjct: 58 VVSGPCAAHSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRN 117
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
T +++DG VYSFG + LG QG++ VL+P L++ Q +V+++
Sbjct: 118 HTLALTDDGSVYSFGENKLGQLG-------QGSQTYAVLSPALISYDGQ---PLVKVACG 167
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ + G LY+FG + GQLG
Sbjct: 168 AEF-----SMVVDCKGNLYSFGCPEYGQLG 192
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 34/131 (25%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 442
WG RYGCL NDV+ V +G + +++ +G ++S+G +
Sbjct: 42 WGPHRYGCL-----------------NDVQVSCVVSGPCAAHSLLITAEGKLWSWGRNDK 84
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH G R + P+L+ L + VV + + HT ALT+ G +Y
Sbjct: 85 GQLGH-----GDTKR---LEAPKLIEGL--ADHLVVAAACGRN-----HTLALTDDGSVY 129
Query: 503 AFGAGDKGQLG 513
+FG GQLG
Sbjct: 130 SFGENKLGQLG 140
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 155/301 (51%), Gaps = 17/301 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + G+ K ++ +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQP 323
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 324 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S + G G+L G + + + L NL V ++ GA H AV+ QDG+V
Sbjct: 202 S----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 441
T+G R G LG+ + P++V+ ++ + + V G Y T V G V SFG G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVHTTGQVVSFGHGP 316
Query: 442 S 442
S
Sbjct: 317 S 317
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR---ELQRRRTEGSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G
Sbjct: 6 GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ G T V+++DG V++FG S LG++ + +G PQLV + ++
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---EIID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V Q+ + HT A +G++ +FG G
Sbjct: 287 GLVSQVDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 23/281 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPI-QALETLNVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGELKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P V +LK + VV IS
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGAE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
HT LT+ GK++ FG GQLG + E+ P+ V+I
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLG---YSPTPEKRGPQLVEI 284
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
GA T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVEIIDGL-VSQVDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
Length = 474
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 162/356 (45%), Gaps = 45/356 (12%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ + ++FG N QLGHG T +P + L +IQAA G T+ ++D
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLTDT 176
Query: 216 GQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G VYA G + G+ GV G KL +TSP + S +++ G F+ +L +G ++
Sbjct: 177 GTVYACGDNKSGQC--GV-GNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLH 232
Query: 274 TFSWGNDARLGHHTEPN------------DVEPHPLLGTL-----------ENIPVVQIA 310
TF +LGH+T+ + +P +L + EN+ ++ A
Sbjct: 233 TFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIIDFA 292
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
G + +A+ S YS G G G+LGH + DE PRLI+ F N + + V G+
Sbjct: 293 CGNNHTVAID---SKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGS 349
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
++ + G + +G + E PK VQ L + TG YT+ V+S
Sbjct: 350 SYSLAISDIGSLYLFGQNK------KTGEANMYPKPVQDLAGWNITSIGTG-YTSIVISA 402
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
D + ++G S + G + D Q + TP+ VT ++ + +V + ++S+
Sbjct: 403 DDSLIAWGA--SPTYGELGLGDLQKSSS----TPKEVTRMEGMKIPMVALGYSHSM 452
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 41/300 (13%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA G H++ +T G VY+ G N SGQ G G S G II+ GA
Sbjct: 162 QAACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRISYNGPPIIKVGCGAEF 221
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL----------------------VE 246
++++ G ++ FG +G+ + G V S ++ V
Sbjct: 222 SVILDIKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVL 281
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 305
++N+ ++ A GN T + + R Y++ +G RLGH + +++ P + +N
Sbjct: 282 PIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRK 341
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQP 363
V+++ G Y LA++ G G +T E +P+ ++ N+
Sbjct: 342 VMRVFCGSSYSLAIS-----------DIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITS 390
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVATG 421
+ + + V+ D + WG YG LG G+ ++ S PK V + +K VA G
Sbjct: 391 I---GTGYTSIVISADDSLIAWGASPTYGELGLGDLQKSSSTPKEVTRMEGMKIPMVALG 447
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 47/273 (17%)
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ ++ + +TF ++LGH +P + L + V+Q A G + L L
Sbjct: 118 SVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQV-ADLADFNVIQAACGRNHTLFLTDT 176
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVV-VAAGAWHAAVVGQDG 380
+ VY+ G G+ G G+ K P + ++ N P++ V GA + ++ G
Sbjct: 177 GT---VYACGDNKSGQCGVGN----KLPTITSPTRISYNGPPIIKVGCGAEFSVILDIKG 229
Query: 381 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQA------------LNDVKAI 416
+ T+G YG LGH + E+ P+ V + +V I
Sbjct: 230 NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNII 289
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
A G+ T + YS+G G LGH D + P+L+ N +
Sbjct: 290 DFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDE--------MVPRLIKFFDTQNRK 341
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
V+++ +S ++ A+++ G LY FG K
Sbjct: 342 VMRVFCGSS-----YSLAISDIGSLYLFGQNKK 369
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
A H+ ++ ++ + T+G + LGHG+ P V L D I A G T ++
Sbjct: 115 AAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLT 174
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSI 486
+ G VY+ G +S G GN+ + +P ++ +V + S+ I
Sbjct: 175 DTGTVYACGDNKSGQC-------GVGNKLPTITSPTRISYNGPPIIKVGCGAEFSVILDI 227
Query: 487 YWNAHTFALTESGKL 501
N HTF L E G+L
Sbjct: 228 KGNLHTFGLPEYGQL 242
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LGHG + P + N+ + A G H + G V G + G G GN
Sbjct: 137 QLGHGDTVTCEKPTQVADLADFNV--IQAACGRNHTLFLTDTGTVYACGDNKSGQCGVGN 194
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+ + N I V G + ++ G++++FG E LGHN DG+
Sbjct: 195 KLPTITSPTRISYNGPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHNT--DGRYFV 252
Query: 458 HANVLT------PQLVTSLKQVNER--VVQISLTNSIYW---NAHTFALTESGKLYAFGA 506
++ ++ P+ V + N+ V+ I N I + N HT A+ + Y++G
Sbjct: 253 NSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIIDFACGNNHTVAIDSKNRAYSWGF 312
Query: 507 GDKGQLG 513
G G+LG
Sbjct: 313 GGIGRLG 319
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 155/301 (51%), Gaps = 17/301 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + G+V+A+G S E + G+ K ++ +P+ + +L I ++Q + G++ + LS
Sbjct: 87 SLAVCHKGRVFAWGAGS--EGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALS 144
Query: 268 REGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQP 323
++ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C
Sbjct: 145 KDSQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 324 SGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S + G G+L G + + + L NL V ++ GA H AV+ QDG+V
Sbjct: 202 S----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGE 441
T+G R G LG+ + P++V+ ++ + + V G Y T V G V SFG G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGSYHTLAYVHTTGQVVSFGHGP 316
Query: 442 S 442
S
Sbjct: 317 S 317
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 108/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR---ELQRRRTEGSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G
Sbjct: 6 GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GELKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ G T V+++DG V++FG S LG++ + +G PQLV + ++
Sbjct: 238 VVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---EIID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V Q+ + HT A +G++ +FG G
Sbjct: 287 GLVSQVDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 23/281 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPI-QALETLNVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGELKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P V +LK + VV IS
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGAE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
HT LT+ GK++ FG GQLG + E+ P+ V+I
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLG---YSPTPEKRGPQLVEI 284
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
GA T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVEIIDGL-VSQVDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1042
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 163/363 (44%), Gaps = 46/363 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +L++ G+++++G++S G +G++ V +P+L+++
Sbjct: 289 PKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--VPNPKLIDT 346
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 303
L + + A G T ++ G +YT WG+ A LGH +E + P + G +E
Sbjct: 347 LAGMNIELVACGENHTCAVTFSGDLYT--WGDGAYNCGLLGHGSEASHWIPKRIGGDMEG 404
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V ++ G + A+ S +++ G G G LGHG + PR +E L L+
Sbjct: 405 IHVSYVSCGPWHTAAVT---SVGQLFTFGDGTFGALGHGDHSSATVPREVE--TLRGLRT 459
Query: 364 VVVAAGAWHAAVVGQD---------------GRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
+ V+ G WH A + G++ TWG G LGHG++E P+ V
Sbjct: 460 IRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVV 519
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
AL D VA G T ++ G VY+ G S S G GN A P +V
Sbjct: 520 ALGDENICQVACGHNLTLALTAAGRVYTMG---STSYGQ------LGNPRATGKVPAIVE 570
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 528
++ ++++ S H LT ++Y +G G GQLG + +R P
Sbjct: 571 G--KIAGKIIEEIACGSY----HVAVLTSKAEVYTWGKGTNGQLG---HGDNKDRNQPTV 621
Query: 529 VDI 531
VD
Sbjct: 622 VDF 624
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 26/294 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNS--SGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ AVT G +Y++G + G LGHG+ W P+ I ++GI + + G T
Sbjct: 358 GENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHT 417
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---L 266
++ GQ++ FG +FG +G + T P+ VE+L+ + ++ + G + TA +
Sbjct: 418 AAVTSVGQLFTFGDGTFGALGHGDHSS--ATVPREVETLRGLRTIRVSCGVWHTAAAVEI 475
Query: 267 SRE------------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
+ E G+++T+ G++ RLGH + + P ++ L + + Q+A G+
Sbjct: 476 TTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVA-LGDENICQVACGHN 534
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
LAL + VY++G G+LG+ R K P ++E ++ +A G++H A
Sbjct: 535 LTLALT---AAGRVYTMGSTSYGQLGN-PRATGKVPAIVEG-KIAGKIIEEIACGSYHVA 589
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
V+ V TWG G G LGHG+ + + P VV L D + VA G T ++
Sbjct: 590 VLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAII 643
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+PK +++ + ++A G +V++ G+++S+G LGH AD V
Sbjct: 288 LPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--------VP 339
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
P+L+ +L +N +V HT A+T SG LY +G G
Sbjct: 340 NPKLIDTLAGMNIELVACG-------ENHTCAVTFSGDLYTWGDG 377
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
A G H++ V G + SFG N GQLG G T E P+P+R L GIR+ QA+
Sbjct: 322 HAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYH 381
Query: 209 TMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+++ D G+VY FG++ FG+ G V KL P LVESL+ + A G + T V +
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGSGDVIDRKL---PCLVESLRGQRITTLACGQYHTVVST 438
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
E V + + +LG + + + + G L+ V + GY + + L +
Sbjct: 439 LEIGVQSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEH--- 495
Query: 328 VYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+ G G+LG G T P +IE Q ++ ++AG +H ++ DG + +G
Sbjct: 496 VFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHV--YRISAGCYHTVLIDADGMLFVFG 553
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
+G LG G+ P V + VA G Y T V++
Sbjct: 554 RNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 157/364 (43%), Gaps = 28/364 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
V++ G NS G+LGH T ++ +G ++ AAG T+L+ G+VY G +
Sbjct: 233 VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYND 292
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
G+ G V + ++ + V A G T V+ +G++ +F + +LG
Sbjct: 293 NGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQ 352
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
++ P P+ G L I V Q + Y Y +AC VY+ G G+LG G
Sbjct: 353 GNTSSEPVPKPVRG-LNGIRVTQASCSY-YHSVIACDNG--EVYTFGRNDFGQLGSGDVI 408
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
D K P L+E + + +A G +H V + V + G YG LG E ES K
Sbjct: 409 DRKLPCLVESLRGQRI--TTLACGQYHTVVSTLEIGVQSCGKNDYGQLGL--ESTESQRK 464
Query: 406 VVQA---LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
V L+ + HV G Y T V++ + V+ FG + L G G+ V
Sbjct: 465 FVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQL-------GLGHTTQRVF 517
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P ++ ++ + V +IS Y HT + G L+ FG GQLG + E
Sbjct: 518 GPTIIEGAQE--KHVYRISA--GCY---HTVLIDADGMLFVFGRNHHGQLG---TGDTNE 567
Query: 523 RGNP 526
R +P
Sbjct: 568 RHSP 571
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 10/305 (3%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--EWRPRPIRSLQGIRIIQA 202
RE AG H++ + S G VY+ G N +GQ G GTT+ PI + + A
Sbjct: 264 REVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHA 323
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
G T+++ D GQ+ +FG + G+ G ++ V P+ V L I V QA+ +
Sbjct: 324 YNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPV--PKPVRGLNGIRVTQASCSYYH 381
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ + G VYTF + +LG DV L +E++ +I C
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLG----SGDVIDRKLPCLVESLRGQRITTLACGQYHTVVS 437
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ V S G G+LG S T+ + + + +L Q V G +H V+ + V
Sbjct: 438 TLEIGVQSCGKNDYGQLGLES-TESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHV 496
Query: 383 CTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+G YG LG G+ P +++ + ++ G Y T ++ DG ++ FG
Sbjct: 497 FGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNH 556
Query: 442 SASLG 446
LG
Sbjct: 557 HGQLG 561
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 37/261 (14%)
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
E V+T + LGH ++ + H L+ E VV +AAG + + L S V
Sbjct: 230 EREVWTCGQNSYGELGH-SDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLC---STGEV 285
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---------VVVAAGAWHAAVVGQD 379
Y+ G G+ G G+ ++ +L P V G H VV D
Sbjct: 286 YTAGYNDNGQCGQGT---------TQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDD 336
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G++ ++G+ G LG GN E VPK V+ LN ++ + Y + + ++G+VY+FG
Sbjct: 337 GQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGR 396
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
+ LG + D + P LV SL+ +R+ ++ HT T
Sbjct: 397 NDFGQLGSGDVIDRK--------LPCLVESLR--GQRITTLACGQY-----HTVVSTLEI 441
Query: 500 KLYAFGAGDKGQLGIELVNNQ 520
+ + G D GQLG+E +Q
Sbjct: 442 GVQSCGKNDYGQLGLESTESQ 462
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 100/234 (42%), Gaps = 16/234 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+QA HS+ G VY+FG N GQLG G + P + SL+G RI A G
Sbjct: 373 TQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQY 432
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFT 263
T++ G S G+ +YG G + S + ++K V G + T
Sbjct: 433 HTVV-----STLEIGVQSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHT 487
Query: 264 AVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
VL+ E V+ F + +LG HT P + G E V +I+AG CY L
Sbjct: 488 IVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEK-HVYRISAG-CYHTVL-ID 544
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
GM ++ G G+LG G + P + F L + VAAG +H V+
Sbjct: 545 ADGM-LFVFGRNHHGQLGTGDTNERHSPFPVSTF--LGKRIAKVAAGFYHTIVL 595
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 25/337 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 206
Q + G + V + G V + G S G+LG G +++ I S+QG + Q A
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894
Query: 207 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G T+ ++++G+V+++G +G+ +G + P+ +E+L+ V+Q + G +AV
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQLSCGFKHSAV 1952
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G+++TF G+ RLG T N P ++ LE+ + +A G + L ++ G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTLCVSAD--G 2009
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G G GKLG G+ + P I+ Q ++ VA G + + + G+V TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKK--VACGTQFSVALSKYGKVFTW 2067
Query: 386 GWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
G R +G G C+ P+ V +L+ V G T V++ DGDV+ +G
Sbjct: 2068 GQERL--IGQPDTRGGSNCQ--PQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNS 2123
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
L G G+ ++ V PQLV L N R V
Sbjct: 2124 EGQL-------GLGHTNSPVREPQLVPCLTGKNIRQV 2153
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 131/315 (41%), Gaps = 65/315 (20%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--- 311
Q G T V+ G V G+ RLG +D+ + +++ V Q+A
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNS-DDLHSLTAISSIQGFVVTQLATSVG 1893
Query: 312 --GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
G+ LA SG V+S G G GKLGHG+ ++ PR IE Q + + ++ G
Sbjct: 1894 SDGH----TLAVTESG-EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ--GEEVIQLSCG 1946
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H+AVV DG++ T+G G YG LG G + VP V AL + +VA G T VS
Sbjct: 1947 FKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVS 2006
Query: 430 EDG-DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNS 485
DG +V++FG G+ LG QGN L ++ V ++V Q S+ S
Sbjct: 2007 ADGTNVWAFGDGDFGKLG-------QGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS 2059
Query: 486 IY-----WN------------------------------------AHTFALTESGKLYAF 504
Y W HT LT G ++ +
Sbjct: 2060 KYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGW 2119
Query: 505 GAGDKGQLGIELVNN 519
G+ +GQLG+ N+
Sbjct: 2120 GSNSEGQLGLGHTNS 2134
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 22/234 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT+ G +++FG+ G+LG GTT + P + +L+ +I
Sbjct: 1933 EALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQI 1992
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
A G T+ +S D V+AFG FG+ G K + P +++L+ + + A
Sbjct: 1993 GYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHL--PTKIKALQGHVIKKVAC 2050
Query: 259 GNFFTAVLSREGRVYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ LS+ G+V+T WG D R G + +P +V +L + +
Sbjct: 2051 GTQFSVALSKYGKVFT--WGQERLIGQPDTRGGSNCQPQEV------ASLSGYFIEDVVC 2102
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPV 364
G + L L S V+ G G+LG G + + + P+L+ N++ V
Sbjct: 2103 GAEHTLVLT---SDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKNIRQV 2153
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 431
VV +G V G G YG LG GN + + ++ +AT D T V+E
Sbjct: 1845 VVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTES 1904
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G+V+S+G G+ LGH G +R P+ + +L+ E V+Q+S H
Sbjct: 1905 GEVFSWGDGDYGKLGH-----GNSDRQRR---PRQIEALQ--GEEVIQLSCGFK-----H 1949
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+ +T GKL+ FG GD G+LG+ N+
Sbjct: 1950 SAVVTADGKLFTFGNGDYGRLGLGTTTNK 1978
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 190/448 (42%), Gaps = 87/448 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS + +GV+Y++GS G+LGHG E PR + G+ ++Q A G T+
Sbjct: 311 AGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLA 370
Query: 212 ISDAGQVYAFGKD---SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ G V+A+G FGE E G G +V P+ + ++ V+ A G + +A ++
Sbjct: 371 LTHKGTVFAWGAGLALGFGEGEDGSGG--MVAVPKHLSDIEAA-VLNIAAGPYHSAAVTV 427
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLEN----------IPVVQIAAGYC--- 314
G + + G +RLGH + N +P P + L N + V ++ Y
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQN--QPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLD 485
Query: 315 ---------------YLLALACQPS-------GMAVYSVGCGLGGKLGHGS--RTDEKHP 350
L +L C S AV+ G G+LG G D+ P
Sbjct: 486 VLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEP 545
Query: 351 RLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
+E F P+ +A G+ H V Q G V WG G LG G P V A
Sbjct: 546 VKLECFS----TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTA 601
Query: 410 LNDVKAIHVATGD-YTTFVVS-------------EDGDVYSFGCGESASLGHNAIADGQG 455
L +A+ V GD Y+ + S E GD++++G ES LG G+
Sbjct: 602 LR--QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL-----GED 654
Query: 456 NRHANVLTPQLVT-----------SLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
++LTPQ V SL+ Q +RV +S + +H+ A+T G+ YA
Sbjct: 655 VASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYA 714
Query: 504 FGAGDKGQLGIELVNNQTERGNPERVDI 531
+GAG G+LGI N P R D
Sbjct: 715 WGAGYYGRLGIGTTANAY---TPTRCDF 739
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 179/419 (42%), Gaps = 61/419 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-----------RSLQGIRIIQ 201
G H++A++ +G +Y++G S G LG G T + + P + + G+ ++
Sbjct: 189 GADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVR 248
Query: 202 A--------AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
A +AGA +M + G ++ +G G G+ + SP +V+ + + +
Sbjct: 249 ADPVIVTCCSAGAKHSMACTSDGTLWTWGHG--GNGRLGLGHNRGSLSPAVVDYILDRDI 306
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V G+ +A + R+G +YT+ G RLGH + P + G +PV+Q+A G
Sbjct: 307 VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGT 365
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAW 371
+ LAL + + V++ G GL LG G D + L +++ V +AAG +
Sbjct: 366 FHTLALTHKGT---VFAWGAGLA--LGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPY 420
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYTTFVV 428
H+A V G + WG G LGHG+++ + PK V L + V + G
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480
Query: 429 SEDGDVY----------------SFGCGESASL---GHNAI------ADGQGNRHANVLT 463
D DV S CGES ++ G A+ DGQ +V
Sbjct: 481 YSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEE 540
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
Q + V + + H A+ + G ++A+GA D GQLG+ +V E
Sbjct: 541 DQ----YEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFE 595
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 76/379 (20%)
Query: 164 GVVYSFGSNSSGQLGH----------------GTTEEE---W---RPRPIRSLQGIRIIQ 201
G VY+FG + G+LG+ G +E+ W +P +R +I +
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIAR 185
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ GA T+ +SD G +YA+G S+G + Q +
Sbjct: 186 ISCGADHTLALSDEGALYAWGVGSYGN------------------------LGQGDTSDS 221
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+T V RVY G++A G E V G + PV+ ++AC
Sbjct: 222 YTPV-----RVYL---GSEAGSGKKKENVGV------GKVRADPVIVTCCSAGAKHSMAC 267
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
G +++ G G G+LG G P +++ +L+ V V AG H+A + + G
Sbjct: 268 TSDG-TLWTWGHGGNGRLGLGHNRGSLSPAVVDY--ILDRDIVFVNAGDSHSACIDRQGV 324
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ TWG G +G LGHG++ VP+ V+ V + VA G + T ++ G V+++G G
Sbjct: 325 LYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG- 383
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
+LG DG G +V K +++ ++ ++ N H+ A+T G L
Sbjct: 384 -LALGFGEGEDGSGG---------MVAVPKHLSD--IEAAVLNIAAGPYHSAAVTVGGDL 431
Query: 502 YAFGAGDKGQLGIELVNNQ 520
+G G +LG NQ
Sbjct: 432 LVWGVGGSSRLGHGDQQNQ 450
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 166/411 (40%), Gaps = 66/411 (16%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A TS G ++++G +G+LG G P + + I+ AG +
Sbjct: 259 AGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSAC 318
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G +Y +G FG +G QG + P+ VE + V+Q A G F T L+ +G
Sbjct: 319 IDRQGVLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGT 376
Query: 272 VYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
V F+WG LG E D V L +E V+ IAAG + A+ G
Sbjct: 377 V--FAWGAGLALG-FGEGEDGSGGMVAVPKHLSDIE-AAVLNIAAGPYHSAAVTV---GG 429
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHP----------------------RLIEQFQLLNLQPV 364
+ G G +LGHG + ++ P RL ++ L++ V
Sbjct: 430 DLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDV 489
Query: 365 VVAAG----AW----------HAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQ 408
+G +W H + G V WG G LG G EE + P ++
Sbjct: 490 PGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE 549
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 468
+ +A G V++ GDV+++G ++ LG + P VT
Sbjct: 550 CFS-TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPS--------FEPAAVT 600
Query: 469 SLKQVNERVVQISLTNSIYWNAHTFAL-----TESGKLYAFGAGDKGQLGI 514
+L+Q + + I ++ TE G L+A+GA + G+LG+
Sbjct: 601 ALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 150/381 (39%), Gaps = 49/381 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTML 211
G H+IA+T G V+ +GSN GQLG G EE + P++ I + A G+ +
Sbjct: 508 GESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLA 567
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G V+A+G + G+ GV + P V +L+ V G+ ++A ++ G
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGV--VRPSFEPAAVTALRQ--AVDVFCGDDYSACITSLGG 623
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+ S G E L G E++ I L Q +V
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKL-GLGEDVASGSI---------LTPQKVVFSVPVC 673
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
C L D + ++ ++ P+ +G H+ + G WG G YG
Sbjct: 674 ACSL----------DSLEMQAYKRVFCVSFSPLC--SGTSHSLAITAQGECYAWGAGYYG 721
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G P V+ VA G + +S DGD++ +G E
Sbjct: 722 RLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC------- 774
Query: 452 DGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
N ++P++ L+ +V IS + H+ A+TE+G+++A+G
Sbjct: 775 -----STTNYMSPRIFMQLEGQGGVPKVKSISASER-----HSLAVTEAGEVFAWGDNKL 824
Query: 510 GQLGIELVNNQTER-GNPERV 529
Q G Q ER PERV
Sbjct: 825 YQTGCG--KRQAERLDRPERV 843
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 49/332 (14%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H +AV G V+++G+N +GQLG G + P + +L+ + + G + I
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACI 618
Query: 213 SDAGQVYAFGKDS---------FGEAEYGVQG------TKLVTSPQLV------------ 245
+ G + ++ +G AE G G + + +PQ V
Sbjct: 619 TSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLD 678
Query: 246 ----ESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
++ K +F V + G + ++ +G Y + G RLG T N P
Sbjct: 679 SLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTP-TRC 737
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
+ + + +AAG C+ LAL+ G + G + S T+ PR+ Q +
Sbjct: 738 DFPKGVRLRSVAAGACHSLALSMD--GDLWF-----WGRREDTCSTTNYMSPRIFMQLEG 790
Query: 359 LNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK 414
P V ++A H+ V + G V WG + G G + E + P+ V L
Sbjct: 791 QGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSA- 849
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
VATG +F + G+V++ G +S LG
Sbjct: 850 CQWVATGPQGSFFILASGEVFAAGVIKSGRLG 881
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+T++G Y++G+ G+LG GTT + P +G+R+ AAGA ++
Sbjct: 698 SGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLA 757
Query: 212 ISDAGQVYAFGK 223
+S G ++ +G+
Sbjct: 758 LSMDGDLWFWGR 769
>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
Length = 1061
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 21/282 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP--RPIRSLQGIRIIQAAAGAGRTM 210
G H+ VT +G V+++G S G+LGHG ++ +P R L+G+++ G T
Sbjct: 286 GVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTA 345
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL---- 266
L++ GQ++ FG +FG +G + V P+ VESL + + A G + TA +
Sbjct: 346 LVTSMGQLFTFGDGTFGVLGHGNREN--VAYPREVESLAGLRTIAVACGVWHTAAVVEVI 403
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ G+++T+ G+ RLGH + +EP + L + +IA G+ + L
Sbjct: 404 VTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEP-TCVPALIDYNFHKIACGHSLTVGL 462
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+ V+++G + G+LG+ D K P L+E +L +A GA+H A +
Sbjct: 463 T---TAGHVFTMGSTVYGQLGNPC-ADGKVPCLVED-KLYGESVEEIACGAYHVAALTSR 517
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V TWG G G LGHG+ E P +V+AL D ++A G
Sbjct: 518 NEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVKYIACG 559
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 132/284 (46%), Gaps = 32/284 (11%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGT 300
P+ +ES + V A G A+++R+G V+T+ + RLGH + ++P + G
Sbjct: 269 PRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGP 328
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
LE + Q+A+ C A S +++ G G G LGHG+R + +PR +E L
Sbjct: 329 LEGL---QVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVE--SLAG 383
Query: 361 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
L+ + VA G WH A V + G++ TWG G LGHG++E P V A
Sbjct: 384 LRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPA 443
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L D +A G T ++ G V++ G LG N ADG+ P LV
Sbjct: 444 LIDYNFHKIACGHSLTVGLTTAGHVFTMGSTVYGQLG-NPCADGK--------VPCLVED 494
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
K E V +I+ Y H ALT ++Y +G G G+LG
Sbjct: 495 -KLYGESVEEIAC--GAY---HVAALTSRNEVYTWGKGANGRLG 532
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS G +++FG + G LGHG E PR + SL G+R I A G T +
Sbjct: 340 GPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAV 399
Query: 213 SDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ G+++ +G +G + +L P V +L + + A G+
Sbjct: 400 VEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRL--EPTCVPALIDYNFHKIACGHS 457
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T L+ G V+T +LG+ V P + L V +IA G ++ AL
Sbjct: 458 LTVGLTTAGHVFTMGSTVYGQLGNPCADGKV-PCLVEDKLYGESVEEIACGAYHVAALT- 515
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S VY+ G G G+LGHG D K P ++E + +++ +A GA ++A +
Sbjct: 516 --SRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVK--YIACGANYSAAI 566
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 9/232 (3%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GH AVT G V+++G + G+LGH E P + L G+R ++ A G T+ ++D
Sbjct: 113 GHMAAVTEDGSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD 171
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+V+A+G + G +GT +PQ +ESL+ ++ + G +A LS E VYT
Sbjct: 172 DGRVFAWGNNKTGCVGVSDRGT---CAPQEIESLRGKKIIDISAGMESSAALSAEHEVYT 228
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ N +LG + + TL N+P+VQIA G ++LAL+ VY+ G G
Sbjct: 229 WGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGE---VYAWGQG 285
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
L G+ + + D P +I+ + ++ ++AAG H+AVV GR+ T G
Sbjct: 286 LQGQTANEKKVDTNIPHVIDALKESRVK--MIAAGGSHSAVVDDKGRLFTVG 335
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 17/281 (6%)
Query: 164 GVVYSFGSNSSGQLGHGTTEE---EWRPRPIR-SLQGIRIIQAAAGAGRTMLISDAGQVY 219
GV+++FG S QLGHG T + + PR + + G+ ++ + G +++ G V+
Sbjct: 66 GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G+ +FG + V T + P+ V L + V+ A G+ T L+ +GRV F+WGN
Sbjct: 126 TWGRGTFGRLGHEVHETGI---PEKVPGLDGMRFVKVACGHVHTLALTDDGRV--FAWGN 180
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK- 338
+ + +L ++ I+AG AL+ + VY+ G G+
Sbjct: 181 NKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHE---VYTWGADNYGQL 237
Query: 339 -LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
LG G+R + R+ L N+ V +A G +H + G V WG G G +
Sbjct: 238 GLGQGARYISQPTRI---RTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEK 294
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+ ++P V+ AL + + +A G + VV + G +++ G
Sbjct: 295 KVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 30/368 (8%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +Y++GS GQLG GT +E P+ + + AAGA T I+ G ++ FG+
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73
Query: 224 DSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
+ +G G + V ++ ++ + VV +I + A ++ +G V+T+ G
Sbjct: 74 GDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFG 133
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
RLGH + P + G L+ + V++A G+ + LAL V++ G G +G
Sbjct: 134 RLGHEVHETGI-PEKVPG-LDGMRFVKVACGHVHTLALTDDGR---VFAWGNNKTGCVGV 188
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EEC 400
R P+ IE L + + ++AG +A + + V TWG YG LG G
Sbjct: 189 SDR-GTCAPQEIE--SLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARY 245
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
S P ++ L +V + +A G Y +S G+VY++G G + D N
Sbjct: 246 ISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKVD------TN 299
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+ P ++ +LK+ RV I+ S H+ + + G+L+ G + E+V +
Sbjct: 300 I--PHVIDALKE--SRVKMIAAGGS-----HSAVVDDKGRLFTVGEEED----WEVVRVR 346
Query: 521 TERGNPER 528
TER ER
Sbjct: 347 TERTAGER 354
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 30/308 (9%)
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ G +Y +G FG+ G Q + + PQ+ + + N A G TA +++ G +
Sbjct: 11 KEGGYLYTWGSGQFGQLGIGTQNDESL--PQIAKEIDNEICTFTAAGANTTAAITQGGVL 68
Query: 273 YTFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+TF G+ +LGH N V P + + + VV + ++ A+ S V+
Sbjct: 69 WTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGS---VW 125
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+ G G G+LGH E H I + L ++ V VA G H + DGRV WG
Sbjct: 126 TWGRGTFGRLGH-----EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGN 180
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+ GC+G ++ P+ +++L K I ++ G ++ +S + +VY++G LG
Sbjct: 181 NKTGCVGV-SDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGL 239
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
GQG R+ + P + +L+ V +VQI+ H AL+ +G++YA+G G
Sbjct: 240 -----GQGARY--ISQPTRIRTLRNVP--IVQIACGQY-----HMLALSAAGEVYAWGQG 285
Query: 508 DKGQLGIE 515
+GQ E
Sbjct: 286 LQGQTANE 293
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+ G + TWG G++G LG G + ES+P++ + +++ A G TT +++ G +++F
Sbjct: 12 EGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTF 71
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G+S LGH D +N + P ++V + +S+ N + H A+TE
Sbjct: 72 GQGDSNQLGHGDTGD-----CSNQVLP------REVEDAFDGLSVVNCSICDGHMAAVTE 120
Query: 498 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G ++ +G G G+LG E+ E G PE+V
Sbjct: 121 DGSVWTWGRGTFGRLGHEV----HETGIPEKV 148
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%)
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
A + G +Y+ G G G+LG G++ DE P++ ++ N AAGA A + Q
Sbjct: 8 AQEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEID--NEICTFTAAGANTTAAITQG 65
Query: 380 GRVCTWGWGRYGCLGHGNE-ECES--VPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVY 435
G + T+G G LGHG+ +C + +P+ V+ A + + ++ + D V+EDG V+
Sbjct: 66 GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G G LGH G P+ V L + R V+++ + HT AL
Sbjct: 126 TWGRGTFGRLGHEVHETG---------IPEKVPGLDGM--RFVKVACG-----HVHTLAL 169
Query: 496 TESGKLYAFGAGDKGQLGI 514
T+ G+++A+G G +G+
Sbjct: 170 TDDGRVFAWGNNKTGCVGV 188
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 164/353 (46%), Gaps = 27/353 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ---AAAG 205
Q I G + + + G V + G S G+LG G +++ I +LQG + Q +
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 2715
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 2716 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVVQMSCGFKHSAV 2773
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-------IAAGYCYLLA 318
++ +G+++TF G+ RLG N P + LE + Q +A G + LA
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSYSVACGLNHTLA 2832
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
++ G V++ G G GKLG G+ T + P+ ++ + ++ VA G + + +
Sbjct: 2833 VST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK--VACGTQFSVALTK 2888
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
DG V T+G R L G + P+ V L V VA G T ++ GDVY++G
Sbjct: 2889 DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 2948
Query: 439 CGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
LG H N V P LVT L+ N R + +S W A
Sbjct: 2949 SNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTA 2992
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 30/250 (12%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L+G +I
Sbjct: 2754 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 2813
Query: 200 IQA-------AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
QA A G T+ +S D V+AFG +G+ G K +SPQ V+ L I
Sbjct: 2814 GQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGI 2871
Query: 252 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENI 304
+ + A G F+ L+++G VYTF G D +G +H P V P+L +
Sbjct: 2872 GIKKVACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GV 2923
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+ +A G + LALA S VY+ G G+LG G + P L+ Q N++
Sbjct: 2924 VIEDVAVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ- 2979
Query: 365 VVAAGAWHAA 374
++AG H+A
Sbjct: 2980 -ISAGRCHSA 2988
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 30/331 (9%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 259
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2713
Query: 260 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 2714 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2771
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-----QPVVVAAGAWH 372
A S +++ G G G+LG G+ +++K P + + + + VA G H
Sbjct: 2772 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNH 2829
Query: 373 AAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
V DG V +G G YG LG GN +S P+ V L + VA G + +++D
Sbjct: 2830 TLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 2889
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G VY+F G+ +G + +G+ H PQ V L V V + H
Sbjct: 2890 GHVYTF--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEH 2934
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
T AL +G +YA+G+ +GQLG+ N+ E
Sbjct: 2935 TLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2965
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 37/216 (17%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 387
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 2674 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2733
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 2734 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2791
Query: 448 NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNA---------HTFALT 496
G GN +N P+ VT+L+ Q+ + WN HT A++
Sbjct: 2792 -----GLGNT-SNKKLPERVTALEGYQIGQ-----------AWNKSYSVACGLNHTLAVS 2834
Query: 497 ESGKL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 531
G + +AFG GD G+LG+ N T + +P++VD+
Sbjct: 2835 TDGSMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 2867
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+A G H++ +T G VYS GSN GQLGH + RP+ + L II A G
Sbjct: 38 KAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRK--RPQLVSGLDAYSIINVACGEMH 95
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +S G+V+++G D++G+ + + GT L P+L++SL VVQ A G + L+
Sbjct: 96 SLALSRWGEVFSWGSDNYGQLGHQLGGT-LQIVPKLIKSLAKYQVVQIAAGQRHSVALTN 154
Query: 269 EGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G ++ + + +LG T P + P + +L IP IA G + A++ SG A
Sbjct: 155 AGEIFVWGANDFGQLGLGTITPYESTPTTVC-SLSGIPFALIACGANHTFAVS--KSG-A 210
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+ G + G+LG +K P + L N + ++ G + + DG V + G
Sbjct: 211 VFGWGKNINGQLGLNDTVSKKFPTQLR--TLRNSRVRFISCGDEFSTFLTLDGGVFSCGA 268
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSF 437
G YG LGHG E +P+ V L ++ G ++ V G VYS+
Sbjct: 269 GMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 32/345 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++ +GS G+LG G EEE + P+ + + +++AA GA T+ ++ G+VY+ G
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--A 281
+ +G+ + + PQLV L ++ A G + LSR G V FSWG+D
Sbjct: 61 NDYGQLGHDQPRKR----PQLVSGLDAYSIINVACGEMHSLALSRWGEV--FSWGSDNYG 114
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LGH L+ +L VVQIAAG + +AL + ++ G G+LG
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT---NAGEIFVWGANDFGQLGL 171
Query: 342 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G+ T E P + L + ++A GA H V + G V WG G LG +
Sbjct: 172 GTITPYESTPTTV--CSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVS 229
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ P ++ L + + ++ GD + ++ DG V+S G G LGH +N
Sbjct: 230 KKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGT--------SN 281
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 504
+ P+ V L + + QIS H+ A S G++Y++
Sbjct: 282 EILPRQVLEL--MGSTITQISCGRQ-----HSLAFVPSRGRVYSY 319
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 9/211 (4%)
Query: 121 LKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180
L + GG+ ++V + + ++ + + Q AG HS+A+T+ G ++ +G+N GQLG G
Sbjct: 116 LGHQLGGTLQIVPKLI---KSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172
Query: 181 T-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
T T E P + SL GI A GA T +S +G V+ +GK+ G+ G+ T
Sbjct: 173 TITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQL--GLNDTVSK 230
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
P + +L+N V + G+ F+ L+ +G V++ G +LGH N++ P +L
Sbjct: 231 KFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVL- 289
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
L + QI+ G + LA PS VYS
Sbjct: 290 ELMGSTITQISCGRQHSLAFV--PSRGRVYS 318
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ AV+ G V+ +G N +GQLG T + P +R+L+ R+ + G + +
Sbjct: 198 GANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFL 257
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V++ G +G+ +G GT P+ V L + Q + G + A + GR
Sbjct: 258 TLDGGVFSCGAGMYGQLGHG--GTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGR 315
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG---TLENIPVV 307
VY++ G +LG N P +LG + +PVV
Sbjct: 316 VYSYGLGGAGQLGLRKPSNASTPQVVLGPWVSPSGVPVV 354
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 166/355 (46%), Gaps = 28/355 (7%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSF 226
+G ++ GQLG+G + + P + + + A G T+ + + GQVY+ G +
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
G+ + +GT P V +L + A G + LS +G +Y++ GND +LGH
Sbjct: 64 GQLGHSHEGTH----PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA 119
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RT 345
T + ++ L + Q++ G + LAL +++ G G+LG G+
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALG---DDGQLFTWGQNTHGQLGLGNGFI 176
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ P+ ++ + + L V AG H+ + G V WG G LG +E+ + P
Sbjct: 177 SQSSPQKVKSLEGIPLAQV--TAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPC 234
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V+ L K ++++ G+ T ++++ G +++FG G S LGH+++ N + P+
Sbjct: 235 HVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSL--------HNEINPR 286
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNN 519
V L + V QI+ HT A SG LYAFG GD GQLG NN
Sbjct: 287 RVLEL--MGSEVSQIACGRK-----HTLAFVPSSGTLYAFGCGDLGQLGTGHENN 334
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 146/314 (46%), Gaps = 28/314 (8%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+ +G +FG+ G V+ P V + A G T L +G+VY+ W
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+ +LGH E P + TL + IA G + LAL+ Q + +YS G G G
Sbjct: 61 NGEGQLGHSHEGTHPAP---VATLAEEHIKHIACGQSHSLALSLQGN---LYSWGAGNDG 114
Query: 338 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
+LGH + + PR+I++ +Q + + G H +G DG++ TWG +G LG G
Sbjct: 115 QLGHATVEHYSRIPRIIKKLSQQKIQQM--SCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172
Query: 397 NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
N +S P+ V++L + V G +F +S G V+ +G + LG N D Q
Sbjct: 173 NGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLN---DEQV 229
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
TP V L+ +VV IS HT LT++G L+ FGAG GQLG +
Sbjct: 230 KE-----TPCHVKPLR--THKVVYISCGEE-----HTAILTKAGGLFTFGAGGSGQLGHD 277
Query: 516 LVNNQTERGNPERV 529
++N+ NP RV
Sbjct: 278 SLHNEI---NPRRV 288
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 24/278 (8%)
Query: 141 ACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIR 198
A E+ + IA G HS+A++ +G +YS+G+ + GQLGH T E R PR I+ L +
Sbjct: 79 ATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQK 138
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
I Q + G + + D GQ++ +G+++ G+ G G +SPQ V+SL+ I + Q
Sbjct: 139 IQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG-NGFISQSSPQKVKSLEGIPLAQVTA 197
Query: 259 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-----PNDVEPHPLLGTLENIPVVQIAA 311
G + LS G V F WG ++ +LG + E P V+P L VV I+
Sbjct: 198 GGSHSFALSLSGAV--FGWGKNSAGQLGLNDEQVKETPCHVKP------LRTHKVVYISC 249
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + A+ + G+ ++ G G G+LGH S +E +PR + +L+ + +A G
Sbjct: 250 GEEH-TAILTKAGGL--FTFGAGGSGQLGHDSLHNEINPRRV--LELMGSEVSQIACGRK 304
Query: 372 HA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
H A V G + +G G G LG G+E P VV+
Sbjct: 305 HTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 147/314 (46%), Gaps = 26/314 (8%)
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
A C +E G H++ + G VYS G N GQLGH + E P P+ +L I
Sbjct: 33 ATCVKE---VACGGKHTLFLMEDGQVYSCGWNGEGQLGH--SHEGTHPAPVATLAEEHIK 87
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIG 259
A G ++ +S G +Y++G + G+ + V+ + P++++ L + Q + G
Sbjct: 88 HIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRI--PRIIKKLSQQKIQQMSCG 145
Query: 260 NFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
+ L +G+++T+ +LG + P V+ +LE IP+ Q+ AG
Sbjct: 146 DDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVK------SLEGIPLAQVTAGG 199
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ AL+ SG AV+ G G+LG ++ P ++ L + V ++ G H
Sbjct: 200 SHSFALSL--SG-AVFGWGKNSAGQLGLNDEQVKETPCHVK--PLRTHKVVYISCGEEHT 254
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDG 432
A++ + G + T+G G G LGH + E P+ V L + +A G +T V G
Sbjct: 255 AILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSG 314
Query: 433 DVYSFGCGESASLG 446
+Y+FGCG+ LG
Sbjct: 315 TLYAFGCGDLGQLG 328
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 163/352 (46%), Gaps = 34/352 (9%)
Query: 165 VVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
V+ +FG+ G+LGH E PR +R+L G+ + A G T + D+G VY +G
Sbjct: 4 VLATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGL 63
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ G+ + + ++ V P V + + + A G + T + G V++F +L
Sbjct: 64 NDKGQLGHDSEDSE-VGLPGEVAMPERVVALSA--GYYHTLCVGESGSVWSFGCNGKGQL 120
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G + V L+ +L++ VV +AAG + LAL +G VYS G G+LGHGS
Sbjct: 121 GLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT---AGGEVYSWGNAANGRLGHGS 177
Query: 344 RTDEK--------HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
T + PRL+ F+ L ++ V+AG H+A V G WG+G++ LG
Sbjct: 178 ATPRRLFGSSIEFLPRLVRAFEALRVEQ--VSAGQMHSAAVSTAGDAFLWGYGKFHQLGF 235
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G++E + P V+ L A VA G + + G V ++G ++ LG
Sbjct: 236 GSDEDLAGPTVLPPLKGSTAA-VACGSLHSLALQYGGHVLAWGTNQNGVLGQG------- 287
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
H P+ + + V+ + W H+ A+T SGKLY +G G
Sbjct: 288 --HEKQQQPKRPSKVPGVSAEQIAAG------WK-HSAAVTGSGKLYTWGWG 330
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 148/304 (48%), Gaps = 21/304 (6%)
Query: 149 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+A+A G H+ AV G VY++G N GQLGH + + E P R++ +AG
Sbjct: 40 KAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSE-VGLPGEVAMPERVVALSAGYY 98
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ + ++G V++FG + G+ G + LV P+LV+SL++ VV A G + L+
Sbjct: 99 HTLCVGESGSVWSFGCNGKGQLGLG-KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT 157
Query: 268 REGRVYTFSWGNDA--RLGHHTEP------NDVEPHP-LLGTLENIPVVQIAAGYCYLLA 318
G VY SWGN A RLGH + + +E P L+ E + V Q++AG + A
Sbjct: 158 AGGEVY--SWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAA 215
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
++ + G G +LG GS D P ++ L VA G+ H+ +
Sbjct: 216 VSTAGD---AFLWGYGKFHQLGFGSDEDLAGPTVLPP---LKGSTAAVACGSLHSLALQY 269
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V WG + G LG G+E+ + PK + V A +A G + V+ G +Y++G
Sbjct: 270 GGHVLAWGTNQNGVLGQGHEK-QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWG 328
Query: 439 CGES 442
G S
Sbjct: 329 WGGS 332
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 36/323 (11%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQ 195
L GE AG H++ V G V+SFG N GQLG G R PR ++SLQ
Sbjct: 80 LPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQ 139
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------VQGTKLVTSPQLVESLK 249
+++ AAG ++ ++ G+VY++G + G +G + G+ + P+LV + +
Sbjct: 140 DNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFE 199
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLENIPV 306
+ V Q + G +A +S G + + +G +LG ++ + P PL G+
Sbjct: 200 ALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGS-----T 254
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
+A G + LAL G V + G G LG G EK + ++ + +
Sbjct: 255 AAVACGSLHSLALQY---GGHVLAWGTNQNGVLGQG---HEKQQQPKRPSKVPGVSAEQI 308
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRY--------------GCLGHGNEECESVPKVVQALND 412
AAG H+A V G++ TWGWG G LGHGN+ P V L+
Sbjct: 309 AAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSL 368
Query: 413 VKAIHVATG-DYTTFVVSEDGDV 434
+ VA G ++T +V D V
Sbjct: 369 TETDLVACGMNHTAAIVELDSGV 391
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 135/302 (44%), Gaps = 36/302 (11%)
Query: 225 SFGEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+FG + G G L + P++V +L + + A G TA + G VYT+ +
Sbjct: 7 TFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDK 66
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LGH +E ++V + E VV ++AGY + L C +V+S GC G+LG
Sbjct: 67 GQLGHDSEDSEVGLPGEVAMPER--VVALSAGYYHTL---CVGESGSVWSFGCNGKGQLG 121
Query: 341 HGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-- 397
G + PRL++ Q + + V VAAG H+ + G V +WG G LGHG+
Sbjct: 122 LGKDVVLVREPRLVKSLQ--DNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSAT 179
Query: 398 ------EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
E +P++V+A ++ V+ G + VS GD + +G G+ LG +
Sbjct: 180 PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDE 239
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
D G P ++ LK V SL H+ AL G + A+G G
Sbjct: 240 DLAG--------PTVLPPLKGSTAAVACGSL--------HSLALQYGGHVLAWGTNQNGV 283
Query: 512 LG 513
LG
Sbjct: 284 LG 285
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 382 VCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+ T+G G G LGH E E +P+VV+AL V VA G T V + G VY++G
Sbjct: 5 LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLN 64
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LGH++ D + V P ERVV +L+ Y HT + ESG
Sbjct: 65 DKGQLGHDS-EDSEVGLPGEVAMP----------ERVV--ALSAGYY---HTLCVGESGS 108
Query: 501 LYAFGAGDKGQLGI 514
+++FG KGQLG+
Sbjct: 109 VWSFGCNGKGQLGL 122
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 36/359 (10%)
Query: 161 TSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLISDAGQ 217
TS+G++ ++GS S+ +LG ++E+ +P P R + I ++G+ + +++ G
Sbjct: 596 TSRGLM-TWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGD 654
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
VY +G+ S V G + P +ESL +I VV +IG + +A + G + T
Sbjct: 655 VYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV--SIGFYHSAAVRANGELLT 712
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ G + +LGH N VEP ++ +L + + Q+ G + + C VY+ G
Sbjct: 713 WGVGEEGQLGHGDTQNQVEPK-VIQSLTSFWITQVQCGEKHTI---CLTKNGKVYTWGSS 768
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G T P + + N+ + +A+G+ H AV+ V +G G
Sbjct: 769 EYGQLGLGDTTRYCKPMPVTALEKYNV--LQIASGSTHCAVLTNSKEVLVFGNGA----A 822
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G S+P +V +L + + G Y+T +SE GDVY++G G+ LGH
Sbjct: 823 MGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQE--LGH------- 873
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
GN TP+LV +L+ N+ + QIS HT LT+SG+++ G GQLG
Sbjct: 874 GNNQTES-TPKLVEALR--NQSIRQISC-----GGRHTAFLTDSGRIFTSGKDSFGQLG 924
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 25/272 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS AV + G + ++G GQLGHG T+ + P+ I+SL I Q G T+ ++
Sbjct: 700 HSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKN 759
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+VY +G +G + G+ T P V +L+ V+Q A G+ AVL+ V F
Sbjct: 760 GKVYTWGSSEYG--QLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVF 817
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPSGMAVYSVG-- 332
GN A +G ++ +IP + + Y ++ L C S A+ G
Sbjct: 818 --GNGAAMG-------------AASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDV 862
Query: 333 --CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G +LGHG+ E P+L+E + +++ ++ G H A + GR+ T G +
Sbjct: 863 YTWGTGQELGHGNNQTESTPKLVEALRNQSIR--QISCGGRHTAFLTDSGRIFTSGKDSF 920
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
G LGH + ++ PK +++L I V+ G+
Sbjct: 921 GQLGHQAGD-QNKPKKIESLTKTTFISVSCGE 951
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQ-----LGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
+G +S A+T G VY +G S LG E++ P + SL I ++ + G
Sbjct: 641 SGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV--SIGF 698
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ + G++ +G G+ +G T+ P++++SL + ++ Q G T L
Sbjct: 699 YHSAAVRANGELLTWGVGEEGQLGHG--DTQNQVEPKVIQSLTSFWITQVQCGEKHTICL 756
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
++ G+VYT+ +LG +P P+ LE V+QIA+G + L +
Sbjct: 757 TKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTA-LEKYNVLQIASGSTHCAVLTNSKEVL 815
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
G G +G S P L+ + L++ + G + A + + G V TWG
Sbjct: 816 VF-----GNGAAMGAASIIS--IPTLVPSLKYLHIDKL--CCGHYSTAAISECGDVYTWG 866
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G+ LGHGN + ES PK+V+AL + ++ G T +++ G +++ G LG
Sbjct: 867 TGQE--LGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLG 924
Query: 447 HNA 449
H A
Sbjct: 925 HQA 927
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H+I +T G VY++GS+ GQLG G T +P P+ +L+ ++Q A+G+
Sbjct: 744 TQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGST 803
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+++++ +V FG + + +++ P LV SLK + + + G++ TA +S
Sbjct: 804 HCAVLTNSKEVLVFGNGA------AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAIS 857
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G VYT WG LGH + P L+ L N + QI+ G + L
Sbjct: 858 ECGDVYT--WGTGQELGHGNNQTESTPK-LVEALRNQSIRQISCGGRHTAFLT---DSGR 911
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+++ G G+LGH + D+ P+ IE
Sbjct: 912 IFTSGKDSFGQLGHQA-GDQNKPKKIESL 939
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 39/195 (20%)
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
C LG K+ ++ + P + F + ++ +++G++++A + ++G V WG G
Sbjct: 608 NCKLGFKVASKEQS-QPTPERLPNFNVSDI--CSISSGSYYSAALTENGDVYMWGRGSVK 664
Query: 392 -----CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
LG E + +P +++L D+ + V+ G Y + V +G++ ++G GE LG
Sbjct: 665 NPPVPVLGIPQIEDQLLPIKLESLTDI--VVVSIGFYHSAAVRANGELLTWGVGEEGQLG 722
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW-------NAHTFALTESG 499
H D Q QV +V+Q SLT+ +W HT LT++G
Sbjct: 723 H---GDTQN----------------QVEPKVIQ-SLTS--FWITQVQCGEKHTICLTKNG 760
Query: 500 KLYAFGAGDKGQLGI 514
K+Y +G+ + GQLG+
Sbjct: 761 KVYTWGSSEYGQLGL 775
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 382 VCTWGWGRYGCLGH---GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+ TWG LG E+ + P+ + N +++G Y + ++E+GDVY +G
Sbjct: 600 LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWG 659
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI---SLTNSIYWNA---HT 492
G + P V + Q+ ++++ I SLT+ + + H+
Sbjct: 660 RGSVKN------------------PPVPVLGIPQIEDQLLPIKLESLTDIVVVSIGFYHS 701
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTE 522
A+ +G+L +G G++GQLG NQ E
Sbjct: 702 AAVRANGELLTWGVGEEGQLGHGDTQNQVE 731
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 166/364 (45%), Gaps = 39/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS+AV G V+++G N SGQLG GTT + P + L G ++ AAG+ ++
Sbjct: 189 AGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSG--VVAVAAGSSHSLA 246
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G++S G+ G +L +P V L V A G F + + +G
Sbjct: 247 VRSDGTVWAWGRNSDGQLGDGTTSARL--TPVQVTGLSGGVAVAA--GMFHSLAVRSDGT 302
Query: 272 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG + R LG + + P +G E V AAG + +L + G V+
Sbjct: 303 VW--AWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETH--SLVARSDGT-VW 354
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G + G+ G GS P + VAAG HA V DG V WG
Sbjct: 355 AWGNNIEGQRGDGSAKTSTAPVQVTALS----GGFTVAAGKAHALAVRSDGTVWAWGQNL 410
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G + P V L+ + VA GD + + DG V+++G S LG
Sbjct: 411 FGQLGDGTRMQRTAPVQVTGLS--GGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGT 468
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
A R A P VT L VV ++ S H+ A++ G ++A+G+
Sbjct: 469 TA----QRPA----PVQVTELSG----VVAVAAGTS-----HSLAVSSDGTVWAWGSNAS 511
Query: 510 GQLG 513
GQLG
Sbjct: 512 GQLG 515
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 161/375 (42%), Gaps = 37/375 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA S+ AG HS+A+ G V++ GSN+SGQLG GTT E P + L +
Sbjct: 27 EAGADEGKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVL 86
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AAG+ ++ I G +A+G + GE G T T P V L V A G
Sbjct: 87 V--AAGSSHSLAIRSDGTAWAWGHNGSGELGDGT--TFRRTRPVQVTGLSEAEAVAA--G 140
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ + V+ +G V+ + W +D +LG T P + G V++AAG + LA+
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGG---VKVAAGDGHSLAV 197
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 378
+ V++ G G+LG G+ P Q+ L VV VAAG+ H+ V
Sbjct: 198 CLDGT---VWAWGRNDSGQLGDGTTVQRSAP-----VQVAGLSGVVAVAAGSSHSLAVRS 249
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
DG V WG G LG G P V L+ + VA G + + V DG V+++G
Sbjct: 250 DGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLS--GGVAVAAGMFHSLAVRSDGTVWAWG 307
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LG ++ LTP L + E V H+
Sbjct: 308 QNTRGQLGDGSM--------TASLTPVQAIGLSE-GEAVAAG--------ETHSLVARSD 350
Query: 499 GKLYAFGAGDKGQLG 513
G ++A+G +GQ G
Sbjct: 351 GTVWAWGNNIEGQRG 365
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 162/369 (43%), Gaps = 37/369 (10%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E AG GHS+ V S G V+++G NS GQLG GTT E P + L G ++ AAG
Sbjct: 133 EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSG--GVKVAAG 190
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++ + G V+A+G++ G+ G T ++P V L + V A G+ +
Sbjct: 191 DGHSLAVCLDGTVWAWGRNDSGQLGDGT--TVQRSAPVQVAGLSGVVAVAA--GSSHSLA 246
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +G V+ + +D +LG T + P + G + V AAG + LA+ +
Sbjct: 247 VRSDGTVWAWGRNSDGQLGDGTTSARLTPVQVTGLSGGVAV---AAGMFHSLAVRSDGT- 302
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-QPVVVAAGAWHAAVVGQDGRVCT 384
V++ G G+LG GS T P Q + L + VAAG H+ V DG V
Sbjct: 303 --VWAWGQNTRGQLGDGSMTASLTP-----VQAIGLSEGEAVAAGETHSLVARSDGTVWA 355
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G G G+ + + P V AL+ VA G V DG V+++G
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALS--GGFTVAAGKAHALAVRSDGTVWAWGQNLFGQ 413
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
L G G R P VT L V ++ + H+ L G ++A+
Sbjct: 414 L-------GDGTRMQRT-APVQVTGLSG----GVAVAAGDD-----HSLGLCLDGTVWAW 456
Query: 505 GAGDKGQLG 513
G GQLG
Sbjct: 457 GQNTSGQLG 465
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 160/366 (43%), Gaps = 43/366 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV S G V+++G N GQLG GT + P + L G + AAG ++
Sbjct: 389 AGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGG--VAVAAGDDHSLG 446
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G+++ G+ G + P V+ + VV A G + +S +G
Sbjct: 447 LCLDGTVWAWGQNTSGQLGDGTTAQR----PAPVQVTELSGVVAVAAGTSHSLAVSSDGT 502
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++A +LG T + P + G VV +AAGY + LA+ + V+
Sbjct: 503 VW--AWGSNASGQLGDGTTRARLTPVQVAGL---SGVVAVAAGYFHSLAVRSDGT---VW 554
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G +LG G+ T P + V AAG +H+ V+ DG V WGWG
Sbjct: 555 AWGNNSFFQLGDGTNTQRPTPVRVPGLS----GGVAAAAGYFHSLVLRSDGTV--WGWGN 608
Query: 390 --YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
YG LG+G P V L+ + VA GD+ + V DG V ++G LG
Sbjct: 609 NAYGQLGNGTANASFSPVQVTGLS--GGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGD 666
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ L P V L N + A+ G L+A+G
Sbjct: 667 GTV--------TTRLAPVGVNGLSGGMAVAAG---------NGFSLAVHSGGMLHAWGYN 709
Query: 508 DKGQLG 513
GQLG
Sbjct: 710 TDGQLG 715
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 156/373 (41%), Gaps = 47/373 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA---AAGAGR 208
AG HS+AV S G V+++G N+ GQLG G+ P +Q I + + AAG
Sbjct: 289 AGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTP-----VQAIGLSEGEAVAAGETH 343
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+++ G V+A+G + E + G K T+P V +L F V A G +
Sbjct: 344 SLVARSDGTVWAWGNNI--EGQRGDGSAKTSTAPVQVTALSGGFTVAA--GKAHALAVRS 399
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G V+ +WG + +LG T P + G + V AAG + L L +
Sbjct: 400 DGTVW--AWGQNLFGQLGDGTRMQRTAPVQVTGLSGGVAV---AAGDDHSLGLCLDGT-- 452
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
V++ G G+LG G+ P Q+ L VV VAAG H+ V DG V W
Sbjct: 453 -VWAWGQNTSGQLGDGTTAQRPAP-----VQVTELSGVVAVAAGTSHSLAVSSDGTVWAW 506
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G LG G P V L+ V + VA G + + V DG V+++G L
Sbjct: 507 GSNASGQLGDGTTRARLTPVQVAGLSGV--VAVAAGYFHSLAVRSDGTVWAWGNNSFFQL 564
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G DG + TP V L ++ + H+ L G ++ +G
Sbjct: 565 G-----DGTNTQRP---TPVRVPGLSG------GVAAAAGYF---HSLVLRSDGTVWGWG 607
Query: 506 AGDKGQLGIELVN 518
GQLG N
Sbjct: 608 NNAYGQLGNGTAN 620
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 20/247 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV+S G V+++GSN+SGQLG GTT P + L G ++ AAG ++
Sbjct: 489 AGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLA 546
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +SF + G + +P V L V AA G F + VL +G
Sbjct: 547 VRSDGTVWAWGNNSFFQLGDGTNTQR--PTPVRVPGLSG--GVAAAAGYFHSLVLRSDGT 602
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ WGN+A +LG+ T P + G + V AAG LA+ + V
Sbjct: 603 VW--GWGNNAYGQLGNGTANASFSPVQVTGLSGGVAV---AAGDFQSLAVRSDGT---VR 654
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G + G+LG G+ T P + + VAAG + V G + WG+
Sbjct: 655 AWGDNIYGQLGDGTVTTRLAPVGVNGLS----GGMAVAAGNGFSLAVHSGGMLHAWGYNT 710
Query: 390 YGCLGHG 396
G LGHG
Sbjct: 711 DGQLGHG 717
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A AG HS+ + S G V+ +G+N+ GQLG+GT + P + L G + AAG ++
Sbjct: 587 AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLSG--GVAVAAGDFQS 644
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ + G V A+G + +G+ G T+L +P V L V A GN F+ +
Sbjct: 645 LAVRSDGTVRAWGDNIYGQLGDGTVTTRL--APVGVNGLSGGMAVAA--GNGFSLAVHSG 700
Query: 270 GRVYTFSWGNDARLGH 285
G ++ + + D +LGH
Sbjct: 701 GMLHAWGYNTDGQLGH 716
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 165/334 (49%), Gaps = 30/334 (8%)
Query: 136 LLAGEACCRRENSQA--IAGPGH-SIAVTSKGVVYSF--GSNSSGQLGHGTTEEEWRPRP 190
L+A A R E+ +A ++GP S+ +Y F G + + QLG G + + P+
Sbjct: 145 LVADVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKL 204
Query: 191 IRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+ +L G II + GA I G+++ +G G G++ K V P V+ L
Sbjct: 205 VSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGR--LGLKSGKDVPYPTRVDFL 262
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
K+ +V G + +A +S + +V+T+ G+ +LGH + ++ P + L +IP+VQ
Sbjct: 263 KDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSV-AALHHIPIVQ 321
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ------ 362
+A GY ++ AL+ VY+ G G G+LGHG P+ + LL L+
Sbjct: 322 VALGYEHMAALSLDGD---VYTWGEGEHGQLGHGDLNSCSTPKKL----LLELENTTGEV 374
Query: 363 -----PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKA 415
PV++A GA ++ GR+ ++G +G LG G + + P ++ + ++ +
Sbjct: 375 ADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRF 434
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+H++ GD V+ G+VY++G G ++G A
Sbjct: 435 VHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 130/297 (43%), Gaps = 13/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H A+ S G ++++G G+LG + ++ P + L+ I+ G + I
Sbjct: 221 GADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACI 280
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S +V+ +G S G+ + + + + P+ V +L +I +VQ A+G A LS +G V
Sbjct: 281 SHDMKVFTWGSGSKGQLGHVEKSDEWL--PRSVAALHHIPIVQVALGYEHMAALSLDGDV 338
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-----A 327
YT+ G +LGH + P LL LEN G LLA + +
Sbjct: 339 YTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGR 398
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+ S G G LG G + P LI + + V ++AG H A V G V TWG
Sbjct: 399 LISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQ 458
Query: 388 GRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G +G +G + N P ++ D +A + G T ++S+DG V G
Sbjct: 459 GCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 14/250 (5%)
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 326
R+ +Y F+WG T +P P L+ TL + I Y A +G
Sbjct: 174 RDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTG- 232
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
+++ G G+LG S D +P ++ L + +V V G + +A + D +V TW
Sbjct: 233 KLFTWGLCDHGRLGLKSGKDVPYPTRVD---FLKDEVIVDVTCGMYSSACISHDMKVFTW 289
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G G LGH + E +P+ V AL+ + + VA G +S DGDVY++G GE L
Sbjct: 290 GSGSKGQLGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQL 349
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAF 504
GH G+ ++ +L+ L+ V + + A T LT+ G+L +F
Sbjct: 350 GH-------GDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISF 402
Query: 505 GAGDKGQLGI 514
G + G LG+
Sbjct: 403 GMSEFGALGL 412
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 18/199 (9%)
Query: 318 ALACQP---SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
AL+ QP + +++ GC +LG G + P+L+ L + V+ GA H A
Sbjct: 167 ALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGA 226
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ G++ TWG +G LG + + P V L D + V G Y++ +S D V
Sbjct: 227 AIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKV 286
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
+++G G LGH +D P+ V +L + +VQ++L H A
Sbjct: 287 FTWGSGSKGQLGHVEKSDE--------WLPRSVAALHHIP--IVQVALGYE-----HMAA 331
Query: 495 LTESGKLYAFGAGDKGQLG 513
L+ G +Y +G G+ GQLG
Sbjct: 332 LSLDGDVYTWGEGEHGQLG 350
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLQGI--------RI 199
Q G H A++ G VY++G GQLGHG P+ + L+
Sbjct: 321 QVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSP 380
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAA 257
+ A GA T++++D G++ +FG FG G+ +L P L+ S + V +
Sbjct: 381 VLLACGASVTLILTDYGRLISFGMSEFG--ALGLGEKRLAARPHLITSRIMDKRRFVHLS 438
Query: 258 IGNFFTAVLSREGRVYTF------SWGNDARLGHHTEPNDVEPHPL 297
G+ A ++ +G VYT+ + G AR + P+ +P+ L
Sbjct: 439 AGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKL 484
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 155/339 (45%), Gaps = 35/339 (10%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+P+ S + + A G L++ G+++ +G++S G +GV + V P+LVES
Sbjct: 271 PKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVES 328
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 305
L V A G F T ++ G ++T+ G N LGH T+ + P + G LE +
Sbjct: 329 LAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL- 387
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
Q+A+ C A + +++ G G G LGHG + + +PR +E L L+ +
Sbjct: 388 --QVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVE--SLSGLRTIA 443
Query: 366 VAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
VA G WH A V + G++ TWG G LGHG++E P V AL +
Sbjct: 444 VACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYN 503
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T ++ G V + G LG N +DG+ P V K +
Sbjct: 504 FQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGK--------LPCFVED-KLLG 553
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
E V +I+ Y H LT ++Y +G G G+LG
Sbjct: 554 ECVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 587
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 23/290 (7%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AVT G ++++G ++++G LGHGT W P+ I L+G+++ G T
Sbjct: 340 GEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHT 399
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 268
L++ Q++ FG +FG +G + V P+ VESL + + A G + TA +
Sbjct: 400 ALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGVWHTAAVVEV 457
Query: 269 ----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+++T+ G+ RLGH + ++P + +E ++A G+ +
Sbjct: 458 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE-YNFQKVACGHSLTVG 516
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L SG V ++G + G+LG+ ++D K P +E +LL +A GA+H AV+
Sbjct: 517 LTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E P +V+ L D ++A G +YT +
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 621
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 26/331 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT +G ++++G S G+LGHG + +PR + SL + A G T +
Sbjct: 288 GVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAV 347
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ AG+++ +G + G GT + ++ L+ + V G + TA+++
Sbjct: 348 TMAGELFTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTTTR 406
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--------ACQ 322
+++TF G LGH + N P + +L + + +A G + A+ +
Sbjct: 407 QLFTFGDGTFGVLGHGDKDNVAYPRE-VESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS 465
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDG 380
S +++ G G +LGHG + P + N Q V H+ VG G
Sbjct: 466 VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACG----HSLTVGLTTSG 521
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+VCT G YG LG+ + + V L +A G Y V++ +VY++G G
Sbjct: 522 QVCTMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKG 581
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ LGH I D + TP LV +LK
Sbjct: 582 ANGRLGHGDIEDRK--------TPTLVETLK 604
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 63/395 (15%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
+ S+ V ++G+ GQLG G +++ + +L+ ++ AG+ ++ I + G+++
Sbjct: 1 MASRTCVLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G + G + + TK ++P V++L N+ +VQAAIG + + EGR T++WG
Sbjct: 61 TWGWNQRGTLGHPPE-TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGR--TYAWGG 117
Query: 280 -------------------DARLGHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
++++ H T P P + VV G+ +
Sbjct: 118 NEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWG 177
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
P + SV P ++ + + + +A GA+H + Q
Sbjct: 178 QPWPPGDIKQISV------------------PVRVQGLENVTM----IAVGAFHNLALVQ 215
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V WG YG LG G+ + S P V+ L + + +A G + + ++ DG VY +G
Sbjct: 216 HGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWG 275
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
GE LG G+ ++ + PQ V L E VVQ+S + H+ A T S
Sbjct: 276 RGEHGRLGF-------GDDKSSKMLPQKVHLL--AGEPVVQVSCGGT-----HSVAATIS 321
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 533
G++++FG GD G+LG G+P V + L
Sbjct: 322 GRMFSFGRGDHGRLGY---GGAVTTGHPVEVPVSL 353
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 29/310 (9%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P +++L ++I+QAA G
Sbjct: 44 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-------AAIGNFF 262
+ + + G+ YA+G + +G+ Q + + ++I + Q A G
Sbjct: 104 LAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTH 163
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLA 318
+ VL+ EG V+T+ G P D++ P + G LEN V IA G + LA
Sbjct: 164 SVVLTEEGHVWTW--------GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGAFHNLA 212
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L V++ G G+LG G P ++ L L V +AAG WH+ +
Sbjct: 213 LVQHGE---VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHSMALTP 267
Query: 379 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG V WG G +G LG G+++ + P+ V L + V+ G + + G ++SF
Sbjct: 268 DGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSF 327
Query: 438 GCGESASLGH 447
G G+ LG+
Sbjct: 328 GRGDHGRLGY 337
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN IA G H++A+ G V+++G+N GQLG G T+ P P++ L G+ ++ AA
Sbjct: 198 ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAA 257
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G +M ++ G VY +G+ G +G + +K++ PQ V L VVQ + G +
Sbjct: 258 GGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML--PQKVHLLAGEPVVQVSCGGTHS 315
Query: 264 AVLSREGRVYTFSWGNDARLGH 285
+ GR+++F G+ RLG+
Sbjct: 316 VAATISGRMFSFGRGDHGRLGY 337
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 30/261 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQ----- 201
QA G H +AV +G Y++G N GQ T E++ + + I I Q
Sbjct: 95 QAAIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPR 154
Query: 202 --AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
AAG ++++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 155 LCVAAGGTHSVVLTEEGHVWTWGQ------PWPPGDIKQISVPVRVQGLENVTMI--AVG 206
Query: 260 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
F L + G V+ +WGN+ +LG P P+ G L + +V IAAG + +
Sbjct: 207 AFHNLALVQHGEVW--AWGNNEYGQLGTGDTQPRSSPVPVKG-LTGLVLVDIAAGGWHSM 263
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAV 375
AL P G AVY G G G+LG G D+K +++ Q LL +PVV V+ G H+
Sbjct: 264 ALT--PDG-AVYGWGRGEHGRLGFG---DDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVA 317
Query: 376 VGQDGRVCTWGWGRYGCLGHG 396
GR+ ++G G +G LG+G
Sbjct: 318 ATISGRMFSFGRGDHGRLGYG 338
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 27/241 (11%)
Query: 117 ERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQ 176
E+Q +Q+ G K++ R + + C R AG HS+ +T +G V+++G
Sbjct: 126 EQQTKEQQNKGESKVLHRDITIPQRCAPRLC--VAAGGTHSVVLTEEGHVWTWG------ 177
Query: 177 LGHGTTEEEWRPRPIRSL------QGIR-IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 229
+ W P I+ + QG+ + A GA + + G+V+A+G + +G+
Sbjct: 178 -------QPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQ- 229
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 289
G T+ +SP V+ L + +V A G + + L+ +G VY + G RLG +
Sbjct: 230 -LGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDK 288
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
+ + L PVVQ++ G + ++A SG ++S G G G+LG+G H
Sbjct: 289 SSKMLPQKVHLLAGEPVVQVSCGGTH--SVAATISGR-MFSFGRGDHGRLGYGGAVTTGH 345
Query: 350 P 350
P
Sbjct: 346 P 346
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 45/378 (11%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLISDAGQV 218
TS+G++ ++GS S +LG + E++ +P P R + I + G+ + +++ G V
Sbjct: 540 TSRGLM-TWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDV 598
Query: 219 YAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
Y +G+ S G PQ VESL+ I V+ +IG + +A + G + T+
Sbjct: 599 YMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVI--SIGFYHSAAVKSNGELLTW 656
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVG 332
G D +LGH DV P+ +++I V Q+ G + + C V++ G
Sbjct: 657 GCGEDGQLGH----GDVFNQPIPKVVQSITSHWVTQVQCGEKHTI---CLTKNGKVFTWG 709
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G P L+ ++ + +A GA H AV+ + V +G G
Sbjct: 710 TSEYGQLGLGDTQKNCTPMLVTSLDKYHI--IQIACGATHNAVLTNNREVLVFGNG--AA 765
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
+G N S+P +V +L + ++ G Y+T ++E GDVY++G G+ LGH
Sbjct: 766 MGSAN--IISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQE--LGH----- 816
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G G A+ P+LV +L+ N+ + QIS H LT+SGK+Y G GQL
Sbjct: 817 GHGTSEAH---PKLVETLR--NQSIRQISCGGR-----HMAFLTDSGKIYTSGKDPFGQL 866
Query: 513 GIELVNNQTERGNPERVD 530
G + ++ P+++D
Sbjct: 867 G----HAAGDQNRPKKID 880
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 17/268 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS AV S G + ++G GQLGHG + P+ ++S+ + Q G T+ ++
Sbjct: 643 HSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKN 702
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+V+ +G +G + G+ T+ +P LV SL ++Q A G AVL+ V F
Sbjct: 703 GKVFTWGTSEYG--QLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVF 760
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGCG 334
GN A +G N + ++ +L+ + + +++ G+ AL C VY+ G
Sbjct: 761 --GNGAAMG---SANIISIPIMVPSLKIMNIERLSCGHYSTAALTECG----DVYTWGS- 810
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G +LGHG T E HP+L+E + +++ ++ G H A + G++ T G +G LG
Sbjct: 811 -GQELGHGHGTSEAHPKLVETLRNQSIRQ--ISCGGRHMAFLTDSGKIYTSGKDPFGQLG 867
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGD 422
H + ++ PK + +L + ++ G+
Sbjct: 868 HAAGD-QNRPKKIDSLLKTTFMSISCGE 894
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 15/234 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H+I +T G V+++G++ GQLG G T++ P + SL IIQ A GA
Sbjct: 687 TQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGAT 746
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++++ +V FG + + +++ P +V SLK + + + + G++ TA L+
Sbjct: 747 HNAVLTNNREVLVFGNGA------AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALT 800
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G VYT WG+ LGH ++ P L+ TL N + QI+ G ++ L SG
Sbjct: 801 ECGDVYT--WGSGQELGHGHGTSEAHPK-LVETLRNQSIRQISCGGRHMAFLT--DSG-K 854
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+Y+ G G+LGH + D+ P+ I+ LL + ++ G H A + R
Sbjct: 855 IYTSGKDPFGQLGHAA-GDQNRPKKID--SLLKTTFMSISCGENHNAALFDTTR 905
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 24/314 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSS-----GQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
G +S A+T G VY +G S LG+GT +++ P+ + SLQ I +I + G
Sbjct: 585 GSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVI--SIGFY 642
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ + G++ +G G+ +G + + P++V+S+ + +V Q G T L+
Sbjct: 643 HSAAVKSNGELLTWGCGEDGQLGHGDVFNQPI--PKVVQSITSHWVTQVQCGEKHTICLT 700
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G+V+T+ +LG + P L+ +L+ ++QIA G + A+ +
Sbjct: 701 KNGKVFTWGTSEYGQLGLGDTQKNCTPM-LVTSLDKYHIIQIACGATHN-AVLTNNREVL 758
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+ G +G S P ++ +++N++ ++ G + A + + G V TWG
Sbjct: 759 VFGNGAAMG------SANIISIPIMVPSLKIMNIE--RLSCGHYSTAALTECGDVYTWGS 810
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G+ LGHG+ E+ PK+V+ L + ++ G +++ G +Y+ G LGH
Sbjct: 811 GQE--LGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGH 868
Query: 448 NAIADGQGNRHANV 461
A G NR +
Sbjct: 869 ---AAGDQNRPKKI 879
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 199/463 (42%), Gaps = 45/463 (9%)
Query: 75 EATCSFFRQPANFAPDYQLSISELAALDMCQKR--AIFKPMTEAE------RQDLKQKCG 126
E + + P +F +L ++ L L+ +KR A P E QD G
Sbjct: 805 EVLPEWAKGPEDF---IELFLTTLLMLNHRRKRNEAHLPPKVEKRNLGPESEQDDGVSSG 861
Query: 127 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--E 184
G KL + F G R+ G H A+T G VY++G N SG+LGHG
Sbjct: 862 G--KLNVPF---GGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVP 916
Query: 185 EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 244
+ P+ + + + + G T+ +++G VY +G G+ G + + P
Sbjct: 917 QLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP-- 974
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
+++L+ + V Q A G T V+ + G V F G +LG + + P L+ +
Sbjct: 975 IKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVP----TKLQAM 1030
Query: 305 P-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS--RTDEKHPRLIEQFQLLNL 361
P +VQ A GYC+ L VY+ G + G+LGH + D P+++E +
Sbjct: 1031 PSIVQAACGYCHTALLT---EAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRI 1087
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--------VPKVVQALNDV 413
+ +A G++H + V TWG G G G E P +V+ L
Sbjct: 1088 R--FIACGSFHTIAITDLDNVYTWG-GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGK 1144
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT--PQLVTSLK 471
+ V+ G + + DG+VY + + SL + G G A+ T P LV+++
Sbjct: 1145 RISLVSCGHAHSVATTMDGEVYVW--SSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIP 1202
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ + + ++ T +TE+G LY++G+G GQLG+
Sbjct: 1203 DGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGL 1245
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 94/221 (42%), Gaps = 26/221 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGA 206
QA G H+ +T G VY+ GS SGQLGH + R P+ + L G RI A G+
Sbjct: 1035 QAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGS 1094
Query: 207 GRTMLISDAGQVYAFG----KDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNF 261
T+ I+D VY +G DS G + L +P +V+ L + + G+
Sbjct: 1095 FHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHA 1154
Query: 262 FTAVLSREGRVYTFSWGNDARL---------GHHTEPNDVEPHPLLGTL------ENIPV 306
+ + +G VY W + L G T E L+ + ++ PV
Sbjct: 1155 HSVATTMDGEVYV--WSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPV 1212
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
V+ AA L +G+ +YS G G G+LG G + D
Sbjct: 1213 VKHAAA-GEEFTLVVTENGL-LYSWGSGAFGQLGLGDQGDR 1251
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 167/364 (45%), Gaps = 42/364 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G L+ + +L N V + A G++ + VL+ +
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGLMPC-HISTNLSNKQVTEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESA 443
YG LG GN+ +S P V D + A H+A +T+ ++ G VY +G C G+S
Sbjct: 286 YGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLA---HTSAAKTQGGHVYMWGQCRGQSV 342
Query: 444 SLGH 447
L H
Sbjct: 343 ILPH 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLMPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP +++L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRISALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 42/365 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N SG LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 112 VLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N V+ I+ G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQ--MCSMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P + Q + +Q V A G H V+ +G++ WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESA 443
YG LG GN+ +S P V D + A H A +T+ ++ G VY +G C G+S
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSV 342
Query: 444 SLGHN 448
L H+
Sbjct: 343 ILPHH 347
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 277 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Query: 277 W--GNDARLGHHT 287
G L HHT
Sbjct: 336 QCRGQSVILPHHT 348
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + ++++ G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T G V+S G+N SGQLGH + R + I L QAA GA
Sbjct: 65 QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTK--RLQMIPGLDAFIFKQAACGASH 122
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +++ GQ++ +G ++ G+ G T + +P++V++L VVQ A G T L+
Sbjct: 123 SVAVNNWGQLFCWGSNADGQLGLGTPLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTN 181
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALACQPSGMA 327
G +Y + +D +LG + +E P L T L IP+ IA G + ++ SG A
Sbjct: 182 NGELYAWGSNSDGQLGLGQDVK-IETRPKLITGLATIPIAFIACGGYH--SIVVSKSG-A 237
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+ G G+LG +D+ P L++ L N + VA G + + DG V T G
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLK--TLRNAKVKYVACGEEFSVFLTMDGGVFTCGA 295
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 437
G YG LGHG E +P+ + L ++ G +T +V G VY++
Sbjct: 296 GMYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 161/345 (46%), Gaps = 32/345 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y +GS G+LG G E+E PR + + + Q A G T+LI+ G+V++ G
Sbjct: 28 MYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGN 87
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DA 281
+ G+ + +L Q++ L QAA G + ++ G++ F WG+ D
Sbjct: 88 NDSGQLGHEKPTKRL----QMIPGLDAFIFKQAACGASHSVAVNNWGQL--FCWGSNADG 141
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+LG T ++ L VVQIA G + LAL + +Y+ G G+LG
Sbjct: 142 QLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALT---NNGELYAWGSNSDGQLGL 198
Query: 342 GSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G E P+LI L + +A G +H+ VV + G V WG +G LG +
Sbjct: 199 GQDVKIETRPKLITG--LATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISD 256
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
+ VP +++ L + K +VA G+ + ++ DG V++ G G LGH A ++N
Sbjct: 257 KYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGA--------NSN 308
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 504
+ P+ + L + V QIS HT AL S GK+YA+
Sbjct: 309 EILPRQIIEL--MGSVVTQISCGKR-----HTLALVPSRGKVYAW 346
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 127/242 (52%), Gaps = 13/242 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 206
QA G HS+AV + G ++ +GSN+ GQLG GT PR +++L ++Q A G
Sbjct: 114 KQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGK 173
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T+ +++ G++YA+G +S G+ G Q K+ T P+L+ L I + A G + + V+
Sbjct: 174 KHTLALTNNGELYAWGSNSDGQLGLG-QDVKIETRPKLITGLATIPIAFIACGGYHSIVV 232
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
S+ G V F WG + +LG + + P LL TL N V +A G + + L
Sbjct: 233 SKSGAV--FGWGRNTFGQLGMNDISDKYVP-CLLKTLRNAKVKYVACGEEFSVFLTMDG- 288
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVC 383
V++ G G+ G+LGHG+ ++E PR I +L+ ++ G H A+V G+V
Sbjct: 289 --GVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVTQISCGKRHTLALVPSRGKVY 344
Query: 384 TW 385
W
Sbjct: 345 AW 346
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L P+ +Y G + G+LG G DE PR ++ + ++ + A G H
Sbjct: 15 FHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQI--ACGETH 72
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
++ +DG V + G G LGH E+ +++ L+ A G + V+ G
Sbjct: 73 TVLITKDGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWG 130
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++ +G LG G TP++V +L VVQI+ HT
Sbjct: 131 QLFCWGSNADGQLG-------LGTPLTIAHTPRMVKALG--TSIVVQIACGKK-----HT 176
Query: 493 FALTESGKLYAFGAGDKGQLGI 514
ALT +G+LYA+G+ GQLG+
Sbjct: 177 LALTNNGELYAWGSNSDGQLGL 198
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HSI V+ G V+ +G N+ GQLG +++ P +++L+ ++ A G ++ +
Sbjct: 225 GGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFL 284
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGR 271
+ G V+ G +G+ +G +++ P+ + L V Q + G T A++ G+
Sbjct: 285 TMDGGVFTCGAGMYGQLGHGANSNEIL--PRQIIELMGSVVTQISCGKRHTLALVPSRGK 342
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLG 299
VY + G +LG T + P +LG
Sbjct: 343 VYAWGLGGSGQLGSQTARSVATPQMVLG 370
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G G+LGH T K ++I + A GA H+ V G++ WG
Sbjct: 82 VFSCGNNDSGQLGHEKPT--KRLQMIPGLDAFIFKQA--ACGASHSVAVNNWGQLFCWGS 137
Query: 388 GRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G P++V+AL + +A G T ++ +G++Y++G LG
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLG 197
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
GQ + P+L+T L + + H+ +++SG ++ +G
Sbjct: 198 L-----GQDVKIET--RPKLITGLATIPIAFIACG-------GYHSIVVSKSGAVFGWGR 243
Query: 507 GDKGQLGIELVNNQ 520
GQLG+ ++++
Sbjct: 244 NTFGQLGMNDISDK 257
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 9/275 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
VYS G+N+SG LG G PR + S G +II +AG+G ++++ G VY++G +
Sbjct: 67 VYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHN 126
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
S+ + G GT TSP L+ + VVQ A G+ + L+ EG VYT+ + N ++G
Sbjct: 127 SY--MQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIG 184
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + + N ++ I G L C VYS G G+LG G+
Sbjct: 185 SGSTANQGSPRKVTACIGNKRIIDITCGQTTSL---CVTDSGEVYSWGYNGNGQLGVGNN 241
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ +P + Q + + VV G HA + +G V WG YG LG GN+ P
Sbjct: 242 VNQTNPCRVAALQGVVIAQVV--CGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTP 299
Query: 405 -KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
+V + V + +++ ++ G +Y +G
Sbjct: 300 LQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS+G G LG G + PRL+E F + + +G H V+ QDG V +WG
Sbjct: 67 VYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGP-HVLVLTQDGGVYSWGH 125
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
Y LG+G + P ++ K + +A G + + ++ +G+VY++G +G
Sbjct: 126 NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGS 185
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
+ A+ QG +P+ VT+ N+R++ I+ + + +T+SG++Y++G
Sbjct: 186 GSTAN-QG-------SPRKVTACIG-NKRIIDITCGQTT-----SLCVTDSGEVYSWGYN 231
Query: 508 DKGQLGIELVNNQTERGNPERV 529
GQLG V N + NP RV
Sbjct: 232 GNGQLG---VGNNVNQTNPCRV 250
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 26/292 (8%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYTF 275
+VY+ G ++ G G + L P+L+ES ++ + G+ VL+++G VY
Sbjct: 66 KVYSLGTNTSGCLGVGDNSSSL--EPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVY-- 121
Query: 276 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG+++ +LG+ P L + N VVQIA G + +AL + VY+ G
Sbjct: 122 SWGHNSYMQLGNGGTSPGTSPSLLSRNISN-KVVQIACGSHHSMALTTEGE---VYTWGY 177
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G++G GS ++ PR + + N + + + G + V G V +WG+ G L
Sbjct: 178 NNCGQIGSGSTANQGSPRKVTAC-IGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQL 236
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G GN ++ P V AL V V G ++++G V+ +G L G
Sbjct: 237 GVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQL-------G 289
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GN+ AN TP QV R+ ++ + +++ + A +SG +Y +G
Sbjct: 290 SGNK-ANTCTP------LQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+GP H + +T G VYS+G NS QLG+G T P + +++Q A G+ +M
Sbjct: 107 SGP-HVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 270
++ G+VY +G ++ G+ G + SP+ V + + N ++ G + ++ G
Sbjct: 166 LTTEGEVYTWGYNNCGQIGSGSTANQ--GSPRKVTACIGNKRIIDITCGQTTSLCVTDSG 223
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VY++ + + +LG N P + L+ + + Q+ GY + LAL V+
Sbjct: 224 EVYSWGYNGNGQLGVGNNVNQTNP-CRVAALQGVVIAQVVCGYAHALALT---DNGVVFG 279
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTWG 386
G G+LG G++ + P Q+ VV A H +A Q G + WG
Sbjct: 280 WGANSYGQLGSGNKANTCTP-----LQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 246 ESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
E + +F Q+A FT + + +VY+ LG + +EP LL +
Sbjct: 43 EKINLVFTFGQSATEVIFTTL---DEKVYSLGTNTSGCLGVGDNSSSLEPR-LLESFSGQ 98
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
++ ++AG + + Q G VYS G +LG+G + P L+ + ++ + V
Sbjct: 99 KIISLSAGSGPHVLVLTQDGG--VYSWGHNSYMQLGNGGTSPGTSPSLLSRN--ISNKVV 154
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDY 423
+A G+ H+ + +G V TWG+ G +G G+ + P KV + + + I + G
Sbjct: 155 QIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQT 214
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
T+ V++ G+VYS+G + LG GN + N P V +L+ V + Q+
Sbjct: 215 TSLCVTDSGEVYSWGYNGNGQLG-------VGN-NVNQTNPCRVAALQGV--VIAQV--- 261
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ AH ALT++G ++ +GA GQLG
Sbjct: 262 --VCGYAHALALTDNGVVFGWGANSYGQLG 289
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAG 207
Q G HS+A+T++G VY++G N+ GQ+G G+T + PR + + G RII G
Sbjct: 155 QIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQT 214
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ ++D+G+VY++G + G + GV T+P V +L+ + + Q G L+
Sbjct: 215 TSLCVTDSGEVYSWGYN--GNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272
Query: 268 REGRVYTFSWGNDA--RLGHHTEPNDVEP 294
G V F WG ++ +LG + N P
Sbjct: 273 DNGVV--FGWGANSYGQLGSGNKANTCTP 299
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q + G H++A+T GVV+ +G+NS GQLG G P + + G + AA
Sbjct: 259 AQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTPLQVATRIGRVVCLAATHYS 318
Query: 208 RTMLISD-AGQVYAFGK 223
+ + +G +Y +G+
Sbjct: 319 HSSAARNQSGHIYMWGQ 335
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 46/345 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTSPQL 244
P+ + S + + A G L + G+V+ +G ++G G K+ ++SP++
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWG-----HGKWGRLGQKIDMDISSPKI 349
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGT 300
V+SL + V A G + T L+ G VYT WGND L + P L G+
Sbjct: 350 VDSLNGLHVKNVACGEYHTCALTDSGEVYT--WGNDVCCADLLIEGRTRSQWIPQKLGGS 407
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L+ I + +A G + ++ S +++ G G G LGHG P+ +E L
Sbjct: 408 LDGISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLR 464
Query: 361 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
++ A G+WH A + + G++ TWG G G LGH + + VP V
Sbjct: 465 VRSA--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQ 522
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L D + V+ G T ++ G V++ G + L GN HA + V
Sbjct: 523 LVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL---------GNPHAR---DKAVMV 570
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
Q+ + V++ T S H LT G +Y +G G+ GQLG+
Sbjct: 571 EGQLKQEFVKVISTGSY----HVAVLTSGGSVYTWGRGENGQLGL 611
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 23/291 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSN--SSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ A+T G VY++G++ + L G T +W P+ + SL GI I A G T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHT 423
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
++S G+++ +G +FG +G + +SP+ VESL + V AA G++ TA +
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEV 481
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
S G+++T+ G++ RLGH + + P + L + VQ++ G +A
Sbjct: 482 MFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQLVDYDFVQVSCGRMLTVA 540
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L + V+++G G+LG+ D+ ++ + QL V++ G++H AV+
Sbjct: 541 LT---NMGKVFAMGSAKYGQLGNPHARDKA---VMVEGQLKQEFVKVISTGSYHVAVLTS 594
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G V TWG G G LG G+ E P V+AL D + + G T +S
Sbjct: 595 GGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 25/254 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ V+S G ++++G + G LGHG P+ + SL G+R+ AA G+
Sbjct: 414 SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSW 473
Query: 208 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T I S +G+++ +G G + G+KLV P V L + VQ
Sbjct: 474 HTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV--PTRVTQLVDYDFVQV 531
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQIAAGYCY 315
+ G T L+ G+V+ A+ G P+ + ++ G L+ V I+ G +
Sbjct: 532 SCGRMLTVALTNMGKVFAM---GSAKYGQLGNPHARDKAVMVEGQLKQEFVKVISTGSYH 588
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 370
+ L SG +VY+ G G G+LG G D P +E Q + P AA +
Sbjct: 589 VAVLT---SGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645
Query: 371 WHAAVVGQDGRVCT 384
H + D CT
Sbjct: 646 LHKPISISDQSTCT 659
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H +A+ S G V+++G SG+LG GT P PI L GI I +AG T+
Sbjct: 92 AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITAI--SAGWNHTLA 149
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 270
+ G ++ S+G+ +YG GT T+ + ++ I + + G + V+ +G
Sbjct: 150 LKADGTLW-----SWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDG 204
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+++ N +LG+ T N+ PH + G L I + ++AG + AL + V++
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQISG-LNGI--INVSAGVIHSTALKSDGT---VWN 258
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 389
GC G+L +G++ D P Q L ++ W ++ + DG WG
Sbjct: 259 WGCNFRGELANGNKIDSYIP-----VQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVND 313
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
YG LG+G++ + P V +L+ + AI TG T + DG++++FG
Sbjct: 314 YGQLGNGSKSDVTSPMQVSSLSGITAID--TGATYTVALKTDGNIFAFG 360
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 163/363 (44%), Gaps = 39/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +IA+ + G V+S+G N +G LG GTT P ++ L GI I +AG +
Sbjct: 42 AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAI--SAGWAHFVA 99
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G GE G L T+P + L I + A G T L +G
Sbjct: 100 LKSDGTVWTWGVGYSGELGDGTN--SLRTTPAPINGLTGITAISA--GWNHTLALKADGT 155
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
++ SWG + +LG N P + G I + I++G + L + + V+
Sbjct: 156 LW--SWGQNQYGQLGTGNTTNSNIPLQVPG---QIGITSISSGGGHSLVIKNDGT---VW 207
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S GC G+LG+G+ ++ P I + + V+AG H+ + DG V WG
Sbjct: 208 SWGCNNFGQLGNGTNSNNPTPHQISGLNGI----INVSAGVIHSTALKSDGTVWNWGCNF 263
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G L +GN+ +P LN + AI A ++++ + S DG + +G + LG+ +
Sbjct: 264 RGELANGNKIDSYIPVQANGLNGIIAI-TAGWEFSSAIKS-DGTFWVWGVNDYGQLGNGS 321
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+D V +P V+SL + + T +T AL G ++AFG
Sbjct: 322 KSD--------VTSPMQVSSLSGI--TAIDTGAT-------YTVALKTDGNIFAFGENTY 364
Query: 510 GQL 512
GQL
Sbjct: 365 GQL 367
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+ V+AG + DG V +WG+ + G LG G + P V+ LN + AI +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ DG V+++G G S LG DG + TP + L +
Sbjct: 98 --VALKSDGTVWTWGVGYSGELG-----DGTNSLRT---TPAPINGLTGITAI------- 140
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
S WN HT AL G L+++G GQLG N T P +V
Sbjct: 141 -SAGWN-HTLALKADGTLWSWGQNQYGQLG---TGNTTNSNIPLQV 181
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G GHS+ + + G V+S+G N+ GQLG+GT P I L G II +AG +
Sbjct: 192 SGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNG--IINVSAGVIHSTA 249
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G + GE G + + P L I + A G F++ + +G
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYI--PVQANGLNGIIAITA--GWEFSSAIKSDGT 305
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+ + + +LG+ ++ +DV + +L I I G Y +AL + +++
Sbjct: 306 FWVWGVNDYGQLGNGSK-SDVTSPMQVSSLSGI--TAIDTGATYTVALKTDGN---IFAF 359
Query: 332 GCGLGGKLGHGSRTDEKHPRLIE 354
G G+LG+G+ T P L+
Sbjct: 360 GENTYGQLGNGTTTGSTTPELVS 382
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L G + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LND+K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L +++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P V +LK + VV IS + A
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD-----A 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT+ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 46/388 (11%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
+ S+ V ++G+ GQLG G +++ + +L+ ++ AG+ ++ I + G+++
Sbjct: 1 MASRTCVLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLF 60
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G + G + + TK ++P V++L N+ +VQAAIG + + EGR T++WG
Sbjct: 61 TWGWNQRGTLGHPPE-TKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGR--TYAWGG 117
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+ G E + G + + C Q + +SV
Sbjct: 118 N-EYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSV-------- 168
Query: 340 GHGSRTDEKH---------PRLIEQF----QLLNLQPV-VVAAGAWHAAVVGQDGRVCTW 385
T+E H P I+Q ++ L+ V ++A GA+H + Q G V W
Sbjct: 169 ---VLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAW 225
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G YG LG G+ + S P V+ L + + +A G + + ++ DG VY +G GE L
Sbjct: 226 GNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRL 285
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G G+ ++ + PQ V L E VVQ+S + H+ A T SG++++FG
Sbjct: 286 GF-------GDDKSSKMLPQKVHLL--AGEPVVQVSCGGT-----HSVAATISGRMFSFG 331
Query: 506 AGDKGQLGIELVNNQTERGNPERVDIDL 533
GD G+LG + G+P V + L
Sbjct: 332 RGDHGRLGY---SGAVTTGHPVEVPVSL 356
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 147/317 (46%), Gaps = 36/317 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH T+ E P +++L ++I+QAA G
Sbjct: 44 VAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHC 103
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGT------------KLVTSPQLVESLKNIFVVQAA 257
+ + + G+ YA+G + +G+ Q + +T PQ + V Q
Sbjct: 104 LAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQ--RCAPRLCVRQLT 161
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGY 313
G + VL+ EG V+T+ G P D++ P + G LEN V IA G
Sbjct: 162 AGGTHSVVLTEEGHVWTW--------GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGA 210
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LAL V++ G G+LG G P ++ L L V +AAG WH+
Sbjct: 211 FHNLALVQHGE---VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHS 265
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ DG V WG G +G LG G+++ + P+ V L + V+ G + + G
Sbjct: 266 MALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISG 325
Query: 433 DVYSFGCGESASLGHNA 449
++SFG G+ LG++
Sbjct: 326 RMFSFGRGDHGRLGYSG 342
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN IA G H++A+ G V+++G+N GQLG G T+ P P++ L G+ ++ AA
Sbjct: 201 ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAA 260
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G +M ++ G VY +G+ G +G + +K++ PQ V L VVQ + G +
Sbjct: 261 GGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML--PQKVHLLAGEPVVQVSCGGTHS 318
Query: 264 AVLSREGRVYTFSWGNDARLGH 285
+ GR+++F G+ RLG+
Sbjct: 319 VAATISGRMFSFGRGDHGRLGY 340
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 174/385 (45%), Gaps = 42/385 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HSIA+ S G V ++G N GQLG GT + P ++ L + I A GA
Sbjct: 62 QVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTAI--AGGAWH 119
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ ++ G V+ +G + G+ G TK P V +LKNI + + L
Sbjct: 120 SVALTSDGTVWTWGSNWAGQLGDGT--TKSRNKPVQVNNLKNITAIASK--GLHNLALKS 175
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G V+T WG + +LG T + P + T ++ IA G + LA Q +
Sbjct: 176 DGTVWT--WGRNIYGQLGDGTTTDRNTP---VQTRSLNTIISIAGGGYHSLA---QKADG 227
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+++ G G+LG G+ T+ P L+ + +++ + G H+ V+ +G + WG
Sbjct: 228 TIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSM----IRCGGDHSIVLKNNGTIWIWG 283
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ ++G LG + + S P + L ++ I GD+ + ++ DG V+++G E+ LG
Sbjct: 284 FNQHGQLGDRSTDNRSTPVPMGDLKNIMTID-GGGDH-SLILKSDGTVWTWGNNENGQLG 341
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
DG A TP ++L V H+ AL G ++A+G+
Sbjct: 342 -----DGTTMSRA---TPIQASTLSNVTAIASG---------EQHSIALKSDGTIWAWGS 384
Query: 507 GDKGQLGIELVNNQTERGNPERVDI 531
GQLG ++N R P V I
Sbjct: 385 NRNGQLGDGSISN---RSTPVLVKI 406
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 149/308 (48%), Gaps = 19/308 (6%)
Query: 146 ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
N AIAG HS+A+TS G V+++GSN +GQLG GTT+ +P + +L+ I I A+
Sbjct: 108 NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAI-ASK 166
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G L SD G V+ +G++ +G+ G + +P SL I + A G + +
Sbjct: 167 GLHNLALKSD-GTVWTWGRNIYGQLGDGTTTDR--NTPVQTRSLNTIISI--AGGGYHSL 221
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+G ++T+ +LG T N P L+ ++++ +++ + +L +
Sbjct: 222 AQKADGTIWTWGLNQYGQLGDGTITNRTIP-VLVNGIKDVSMIRCGGDHSIVL-----KN 275
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
++ G G+LG S + P + L N+ + + G H+ ++ DG V T
Sbjct: 276 NGTIWIWGFNQHGQLGDRSTDNRSTP--VPMGDLKNI--MTIDGGGDHSLILKSDGTVWT 331
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LG G + P L++V AI A+G+ + + DG ++++G +
Sbjct: 332 WGNNENGQLGDGTTMSRATPIQASTLSNVTAI--ASGEQHSIALKSDGTIWAWGSNRNGQ 389
Query: 445 LGHNAIAD 452
LG +I++
Sbjct: 390 LGDGSISN 397
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 17/264 (6%)
Query: 146 ENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+N AIA G H++A+ S G V+++G N GQLG GTT + P RSL II A
Sbjct: 158 KNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN--TIISIAG 215
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ G ++ +G + +G+ G + + P LV +K++ +++ G +
Sbjct: 216 GGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTI--PVLVNGIKDVSMIRC--GGDHSI 271
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
VL G ++ + + +LG + N P P+ G L+NI + + +L S
Sbjct: 272 VLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPM-GDLKNIMTIDGGGDHSLIL-----KS 325
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V++ G G+LG G+ P I+ L N+ +A+G H+ + DG +
Sbjct: 326 DGTVWTWGNNENGQLGDGTTMSRATP--IQASTLSNV--TAIASGEQHSIALKSDGTIWA 381
Query: 385 WGWGRYGCLGHGNEECESVPKVVQ 408
WG R G LG G+ S P +V+
Sbjct: 382 WGSNRNGQLGDGSISNRSTPVLVK 405
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 31/270 (11%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++Q + G+F + L +G V T+ +LG T + P + L N V IA G
Sbjct: 60 ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQ-VKDLNN--VTAIAGG 116
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAW 371
+ +AL + V++ G G+LG G+ P Q+ NL+ + +A+
Sbjct: 117 AWHSVALTSDGT---VWTWGSNWAGQLGDGTTKSRNKP-----VQVNNLKNITAIASKGL 168
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H + DG V TWG YG LG G + P ++LN + I +A G Y + D
Sbjct: 169 HNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTI--ISIAGGGYHSLAQKAD 226
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G ++++G + LG I N P LV +K V+ +++ H
Sbjct: 227 GTIWTWGLNQYGQLGDGTI--------TNRTIPVLVNGIKDVS--MIRCG-------GDH 269
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQT 521
+ L +G ++ +G GQLG +N++
Sbjct: 270 SIVLKNNGTIWIWGFNQHGQLGDRSTDNRS 299
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ S G V+++G N GQLG GTT + P +++L G+ I AAG G ++
Sbjct: 74 AGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGGHSLA 131
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + +G+ G + T+P V++L + V A G+ L +G
Sbjct: 132 LKSDGTVWAWGYNGYGQLGDGTITNR--TTPVQVKNLTGVVAVAAGGGHSL--ALKSDGT 187
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + +LG T N P ++N+ VV IAAG + LAL S V++
Sbjct: 188 VWAWGYNGYGQLGDGTTMNRYTPV----QVQNLTGVVAIAAGSSHSLALK---SDGTVWA 240
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T+ P ++ + V +AAG H+ + DG V TWGW
Sbjct: 241 WGNNGYGQLGDGTTTNRTTPVRVQGLTDV----VAIAAGNEHSLALKSDGTVWTWGWNYS 296
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G P VQ L V AI A G + + DG V+++G + LG
Sbjct: 297 GQLGDGTTTNRYTPVQVQNLTGVVAI--AAGGGHSLALKSDGTVWAWGNNDWGELGDGTR 354
Query: 451 ADGQGNRHANV 461
D RH V
Sbjct: 355 TD----RHTPV 361
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 173/393 (44%), Gaps = 55/393 (13%)
Query: 138 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI 197
AG + AG S+A+ S G V+++G P P+++L G+
Sbjct: 25 AGADISTGSQVKIAAGGARSLAIKSDGTVWAWGGT---------------PVPVQNLTGV 69
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
++A G+ ++ + G V+A+G + +G+ G + +P V++L + + A
Sbjct: 70 VAVEA--GSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRY--TPVQVQNLTGVVAIAAG 125
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+ L +G V+ + + +LG T N P ++N+ +A
Sbjct: 126 GGHSL--ALKSDGTVWAWGYNGYGQLGDGTITNRTTPV----QVKNL-TGVVAVAAGGGH 178
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 376
+LA + G V++ G G+LG G+ + P Q+ NL VV +AAG+ H+ +
Sbjct: 179 SLALKSDGT-VWAWGYNGYGQLGDGTTMNRYTP-----VQVQNLTGVVAIAAGSSHSLAL 232
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
DG V WG YG LG G + P VQ L DV AI A G+ + + DG V++
Sbjct: 233 KSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAI--AAGNEHSLALKSDGTVWT 290
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G S LG NR+ TP V +L VV I+ H+ AL
Sbjct: 291 WGWNYSGQLGDGTTT----NRY----TPVQVQNLT----GVVAIAAGG-----GHSLALK 333
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
G ++A+G D G+LG +T+R P +V
Sbjct: 334 SDGTVWAWGNNDWGELGD---GTRTDRHTPVQV 363
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 130/263 (49%), Gaps = 22/263 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS+A+ S G V+++G N GQLG GT P +++L ++ AAG G ++
Sbjct: 124 AGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLT--GVVAVAAGGGHSLA 181
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + +G+ G + +P V++L + + A G+ + L +G
Sbjct: 182 LKSDGTVWAWGYNGYGQLGDGTTMNRY--TPVQVQNLTGVVAIAA--GSSHSLALKSDGT 237
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WGN+ +LG T N P + G + VV IAAG + LAL S V+
Sbjct: 238 VW--AWGNNGYGQLGDGTTTNRTTPVRVQGLTD---VVAIAAGNEHSLALK---SDGTVW 289
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ T+ P Q+ NL VV +AAG H+ + DG V WG
Sbjct: 290 TWGWNYSGQLGDGTTTNRYTP-----VQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNN 344
Query: 389 RYGCLGHGNEECESVPKVVQALN 411
+G LG G P V LN
Sbjct: 345 DWGELGDGTRTDRHTPVQVSGLN 367
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 154/307 (50%), Gaps = 16/307 (5%)
Query: 144 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
R + + I+ G HS +T G +Y+FGSN GQLG G + +P ++SL+ +
Sbjct: 34 RNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV 93
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G T++ + AG++Y+FG S + + G + TSPQL+ + + + +A G
Sbjct: 94 ACGRSHTIVCTKAGRLYSFGAGS--DGQLGTGDAQCATSPQLINLPEQKYKLLSA-GTDH 150
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A L+ +G +Y + G++ +LG + P L + V ++ GY Y A+
Sbjct: 151 SAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL---KFHSSVSWVSCGY-YHTAIVTD 206
Query: 323 PSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
+Y+ G GKLG D P+ +E + + +VA G H AV+ G
Sbjct: 207 DG--KLYTFGEKEFGKLGLTEDQLEDTTTPKHVES---ITEKIKLVACGGAHTAVISDVG 261
Query: 381 RVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
+ T+G G +G LG+G + S+P+ V L++ K +V+ GD T V++E G +Y+FG
Sbjct: 262 NLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGD 321
Query: 440 GESASLG 446
G LG
Sbjct: 322 GRHGKLG 328
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 168/353 (47%), Gaps = 38/353 (10%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G +++FG + + + W IR+ + + I + G + +I+++G++Y FG
Sbjct: 13 GAIFTFGKS---RFADNLPSKFW----IRNDKAMHI---SCGDEHSAIITESGRLYTFGS 62
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ +G+ G+ K T P V+SLK V A G T V ++ GR+Y+F G+D +L
Sbjct: 63 NDWGQ--LGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQL 120
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G T P L L ++AG + AL + +Y G G G+LG G+
Sbjct: 121 G--TGDAQCATSPQLINLPEQKYKLLSAGTDHSAALTTDGT---LYMWGSGSEGQLGLGN 175
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-- 401
+ P+ ++ ++ V+ G +H A+V DG++ T+G +G LG ++ E
Sbjct: 176 TDSVETPKELKFHSSVSW----VSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDT 231
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
+ PK V+++ + K VA G T V+S+ G++Y+FG G LG+ G +
Sbjct: 232 TTPKHVESITE-KIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGN-------GPSLLQL 283
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
PQ V L + + V + HT +TE G +Y FG G G+LGI
Sbjct: 284 SLPQKVARLSEHKCKYVSCG-------DNHTAVITEKGAMYTFGDGRHGKLGI 329
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 144 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
++E +A G H+I T G +YSFG+ S GQLG G + P+ I +L +
Sbjct: 86 KQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQKYKLL 144
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+AG + ++ G +Y +G S E + G+ T V +P+ ++ ++ V + G +
Sbjct: 145 SAGTDHSAALTTDGTLYMWGSGS--EGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYH 200
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
TA+++ +G++YTF +LG + + P + E I +V + +++
Sbjct: 201 TAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDV 260
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
+Y+ G G+ G+LG+G +K RL E + V+ G H AV
Sbjct: 261 GN-----LYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEH------KCKYVSCGDNHTAV 309
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEE 399
+ + G + T+G GR+G LG E+
Sbjct: 310 ITEKGAMYTFGDGRHGKLGISEED 333
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LND+K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L +++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P V +LK + VV IS + A
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD-----A 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT+ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 172/386 (44%), Gaps = 42/386 (10%)
Query: 96 SELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG 155
S L LD+ K IF +E E Q ++Q C G
Sbjct: 38 SSLKMLDV-GKWPIFSLCSEEELQLVRQAC------------------------VFGSAG 72
Query: 156 HSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLIS 213
+ + T+ ++ G+N G LG G + PR + SL G +I + G+G +L +
Sbjct: 73 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLAT 132
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G V+
Sbjct: 133 TEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVF 191
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ + N ++G + N P + G L+N VV IA G + ++A +G VY G
Sbjct: 192 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQ--MCSMAVVDTG-EVYVWGY 248
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG L
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQL 306
Query: 394 GHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
G GN+ +S P V D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 307 GTGNKSNQSYPTPVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPH 363
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQV 473
+ A TP + L V
Sbjct: 364 LTHFSSTDDVFACFATPAVTWRLLSV 389
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 137 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 195
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 255
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G G N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 256 L-----GSG---GNQPTPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 300
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 301 NSYGQLGTGNKSNQS 315
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 22/289 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H +A+ S G V+++G SG+LG GT P PI L GI I +AG T+
Sbjct: 92 AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITAI--SAGWNHTLA 149
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREG 270
+ G ++ S+G+ +YG GT T+ + ++ I + + G + V+ +G
Sbjct: 150 LKADGTLW-----SWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDG 204
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+++ N +LG+ T N+ PH + G L I + ++AG + AL + V++
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQISG-LNGI--INVSAGVIHSTALKSDGT---VWN 258
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGR 389
GC G+L +G++ D P Q L ++ W ++ + DG WG
Sbjct: 259 WGCNFRGELANGNKIDSYIP-----VQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVND 313
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
YG LG+G++ + P V +L+ + AI TG T + DG++++FG
Sbjct: 314 YGQLGNGSKSDVTSPMQVSSLSGITAID--TGATYTVALKTDGNIFAFG 360
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 162/363 (44%), Gaps = 39/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +IA+ + G V+S+G N +G LG GTT P ++ L GI I +AG +
Sbjct: 42 AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAI--SAGWAHFVA 99
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G GE G L T+P + L I + A G T L +G
Sbjct: 100 LKSDGTVWTWGVGYSGELGDGTN--SLRTTPAPINGLTGITAISA--GWNHTLALKADGT 155
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
++ SWG + +LG N P + G I + I++G + L + + V+
Sbjct: 156 LW--SWGQNQYGQLGTGNTTNSNIPLQVPG---QIGITSISSGGGHSLVIKNDGT---VW 207
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
S GC G+LG+G+ ++ P I + + V+AG H+ + DG V WG
Sbjct: 208 SWGCNNFGQLGNGTNSNNPTPHQISGLNGI----INVSAGVIHSTALKSDGTVWNWGCNF 263
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G L +GN+ +P LN + AI A ++++ + DG + +G + LG+ +
Sbjct: 264 RGELANGNKIDSYIPVQANGLNGIIAI-TAGWEFSS-AIKSDGTFWVWGVNDYGQLGNGS 321
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+D V +P V+SL + + T +T AL G ++AFG
Sbjct: 322 KSD--------VTSPMQVSSLSGI--TAIDTGAT-------YTVALKTDGNIFAFGENTY 364
Query: 510 GQL 512
GQL
Sbjct: 365 GQL 367
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+ V+AG + DG V +WG+ + G LG G + P V+ LN + AI +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ DG V+++G G S LG DG + TP + L +
Sbjct: 98 --VALKSDGTVWTWGVGYSGELG-----DGTNSLRT---TPAPINGLTGITAI------- 140
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
S WN HT AL G L+++G GQLG N T P +V
Sbjct: 141 -SAGWN-HTLALKADGTLWSWGQNQYGQLG---TGNTTNSNIPLQV 181
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 21/297 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L I+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ VV I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313
Query: 387 WGRYGCLGHGNEECES----VPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSF 437
G + E + + ++ A + DV+ H+ G Y FV + + F
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQVSIILF 370
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LND+K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 310
++QAA G + +L RV S G+++R LG P P+ LE + V ++
Sbjct: 25 LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 369
G + LA+ C V++ G G G+LG G + P+ I L +++ + V+ G
Sbjct: 82 CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCG 136
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S G SFG G S S G A++ +N P V +LK + VV IS +
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
AHT LT+ GK++ FG GQLG + ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 10/286 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N SG LG G + PR + SL +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
+ + G LV Q+ +L N V++ A G++ + VL+ +G VY + + N ++G
Sbjct: 103 GYTQLGNGTTNHGLVPC-QVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 162 SGSTANQAIPRRVTGCLQNKVVVNIACG--QMCSVAVVDTG-EVYVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 K-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
VV + + I +T+ ++ G VY +G C G+S L H
Sbjct: 277 TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 127/244 (52%), Gaps = 18/244 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H I T++G V+++G N QLG+GTT P + + L ++I+ A G+ ++
Sbjct: 83 SGP-HIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSL 141
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VYA+G ++ G+ G + + P+ V L+N VV A G + +
Sbjct: 142 VLTSDGEVYAWGYNNSGQVGSGSTANQAI--PRRVTGCLQNKVVVNIACGQMCSVAVVDT 199
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A G+ + L L + V
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQ---V 254
Query: 329 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTW 385
Y+ G G+LG G+++++ +P ++E+ +++ + A + H +A Q G V W
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE----IAACHSTHTSAAKTQGGHVYMW 310
Query: 386 GWGR 389
G R
Sbjct: 311 GQCR 314
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 147 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 202
N Q I G HS+ +TS G VY++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 127 NKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNI 186
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G ++ + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 187 ACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGFAH 244
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 291
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LG+G+ P + L N Q + VA G++H+ V+ DG V WG+ G +G G+
Sbjct: 106 QLGNGTTNHGLVPCQVST-NLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS 164
Query: 398 EECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+++P+ V L + +++A G + V + G+VY +G + LG +
Sbjct: 165 TANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS------- 217
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
N TP V +L+ + + V AHT LT+ G++YA+GA GQLG
Sbjct: 218 -SGNQPTPCRVAALQGIRVQRVACGF-------AHTLVLTDEGQVYAWGANSYGQLGTGN 269
Query: 517 VNNQT 521
+NQ+
Sbjct: 270 KSNQS 274
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 310
++QAA G + +L RV S G+++R LG P P+ LE + V ++
Sbjct: 25 LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLTVDLVS 81
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 369
G + LA+ C V++ G G G+LG G + P+ I L ++ + V+ G
Sbjct: 82 CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S G SFG G ++S G A++ +N P V +LK + VV IS +
Sbjct: 197 SLCGT--SFGWGSNSS-GQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
AHT LT+ GK++ FG GQLG + ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNSSGQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG-NDARLGHHTE 288
A + G+V +F G +D H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326
>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 1149
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 183/412 (44%), Gaps = 74/412 (17%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AGP H +A+TS G VYS+G +G+LGHG + E R R I +L I+ A+ G T +
Sbjct: 558 AGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTAV 617
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ GQVY FG++SFG + G++G + P++V K VV + G T +L +G
Sbjct: 618 LTKHGQVYVFGENSFG--QLGLKGQQPRLLPEVVPLPKRAIVV--SCGREHTCILLEDGD 673
Query: 272 VYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC--QPS 324
+ + +G + P + + L+ ++ + + IA+G + L P
Sbjct: 674 LMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTMTLTAVQTPQ 733
Query: 325 GMAV-----------------------------------YSVGCGLGGKLGHGSRTDEKH 349
G V +++GCG G+LG G T +
Sbjct: 734 GSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLGSGDDTPAQR 793
Query: 350 PRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESV--P 404
L + + + + V V G A +G G + +WGW +G LGHG E ESV P
Sbjct: 794 -NLFRRVVVPDFEDVCAVDCGFSFAIAIGSSGALYSWGWNTHGQLGHGLAVELGESVFTP 852
Query: 405 K---VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
K VV+ L+ V I VA G +++ G+VY++ GE+A GH G G
Sbjct: 853 KEISVVKTLSQV--IQVACGGTFVVALTQCGEVYTW--GEAAFCGH-----GNGVEKF-F 902
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L P+ + SL+ ++ + H AL+ +YA+G G G G
Sbjct: 903 LCPKRLASLQDISAVAAG---------DRHAAALSYDHTIYAWGNGPVGNGG 945
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 185/413 (44%), Gaps = 73/413 (17%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEE----------EWRPR----PIRSLQGIRIIQAAAG 205
+T+ V+S G++ QLG G ++E E + R P+RS G I + AG
Sbjct: 386 LTADNKVFSCGNDDWSQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRS--GDHICKLTAG 443
Query: 206 AGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFT 263
+ I + ++Y +G++SFG+ ++G+ V++P V+ VV A G+F+
Sbjct: 444 SAFAAAIGLQSRRMYLWGQNSFGQCL--MEGSLTVSTPVAVDIPGQYSEVVDVACGSFYA 501
Query: 264 AVLSREGRVYTFSWGNDARLGHHT---------EPNDVEPHPLLGTLE--NIPVVQIAAG 312
A+ G V T WG L PN+ + + + N VV + AG
Sbjct: 502 AIAFSCGSVGT--WGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVALRAG 559
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAW 371
+ LA+ S AVYS G G+LGHG +E+ R+I+ L+ +V A+ G +
Sbjct: 560 PFHCLAIT---SSGAVYSWGMERNGRLGHGDNKNEERMRVIDA---LSSHVIVDASCGCF 613
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
H AV+ + G+V +G +G LG ++ +P+VV +AI V+ G T ++ ED
Sbjct: 614 HTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREHTCILLED 671
Query: 432 GDVYSFGCGESASLGHN----------------AIADGQGNRHA------------NVLT 463
GD+ + G S+ +G ++ G+ HA V T
Sbjct: 672 GDLMACGSVRSSGVGVGFGARFSVPRRILQNFLIMSVASGDLHAIASGTLRTMTLTAVQT 731
Query: 464 PQ---LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
PQ + ++ ++NE V + L + L E+G+ +A G G GQLG
Sbjct: 732 PQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLG 784
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 159/388 (40%), Gaps = 60/388 (15%)
Query: 162 SKGVVYSFGSNSSGQLGH----GTTEEEWRPR-------PIRSLQGIRIIQAAAGAGRTM 210
SKGVV+++G+ +S + G + W P P R + ++ + GA
Sbjct: 325 SKGVVFTWGNVASVKTGKKLQLSSPSNSWDPPQGSYTLIPTRMAIPVPVLSFSCGAYSCY 384
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---ESLKNIF---------VVQAAI 258
++ +V++ G D + ++ G +K + S +V E +F + +
Sbjct: 385 FLTADNKVFSCGNDDW--SQLGAGKSKELRSSSVVRHGEGKYRLFRVPLRSGDHICKLTA 442
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-----VVQIAAGY 313
G+ F A + + R + WG ++ E + P+ +IP VV +A G
Sbjct: 443 GSAFAAAIGLQSR-RMYLWGQNSFGQCLMEGSLTVSTPVA---VDIPGQYSEVVDVACGS 498
Query: 314 CYL-LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP------RLIEQFQLLNLQPVVV 366
Y +A +C G + V L K+ D P + I F+ N + V +
Sbjct: 499 FYAAIAFSCGSVG--TWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNKKVVAL 556
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
AG +H + G V +WG R G LGHG+ + E +V+ AL+ + + G + T
Sbjct: 557 RAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVIVDASCGCFHTA 616
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
V+++ G VY FG LG GQ P+L+ + + +R + +S
Sbjct: 617 VLTKHGQVYVFGENSFGQLG----LKGQ--------QPRLLPEVVPLPKRAIVVSCGRE- 663
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLGI 514
HT L E G L A G+ +G+
Sbjct: 664 ----HTCILLEDGDLMACGSVRSSGVGV 687
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 157/417 (37%), Gaps = 83/417 (19%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A G H+ +T G VY FG NS GQLG + P + + R I + G T
Sbjct: 608 ASCGCFHTAVLTKHGQVYVFGENSFGQLGLKGQQPRLLPEVVPLPK--RAIVVSCGREHT 665
Query: 210 MLISDAGQVYAFGKDS-------FGEAEYGVQGTKL------------------------ 238
++ + G + A G FG A + V L
Sbjct: 666 CILLEDGDLMACGSVRSSGVGVGFG-ARFSVPRRILQNFLIMSVASGDLHAIASGTLRTM 724
Query: 239 ----VTSPQ----------LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
V +PQ L E +K + +G F +L+ G + G++ +LG
Sbjct: 725 TLTAVQTPQGSPVDDNMSKLNEMVKRHGLRSLCVGKDFAVILAETGEAFAIGCGSNGQLG 784
Query: 285 HHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+D L +P V + G+ + +A+ S A+YS G G+LG
Sbjct: 785 ---SGDDTPAQRNLFRRVVVPDFEDVCAVDCGFSFAIAIG---SSGALYSWGWNTHGQLG 838
Query: 341 HGSRTDEKH----PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
HG + P+ I + L+ Q + VA G + Q G V TWG + G+G
Sbjct: 839 HGLAVELGESVFTPKEISVVKTLS-QVIQVACGGTFVVALTQCGEVYTWGEAAFCGHGNG 897
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
E+ PK + +L D+ A VA GD +S D +Y++G G + G +
Sbjct: 898 VEKFFLCPKRLASLQDISA--VAAGDRHAAALSYDHTIYAWGNGPVGNGGAAGVM----- 950
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V TP + + V + +TF +T+ G LY +G GQ G
Sbjct: 951 ----VPTPVALNFVHPVRQLFCG---------QVNTFVITDVGDLYVWGLNTSGQCG 994
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRY-----------GCLGHGNEECESVPKVVQALND 412
V VA G+++AA+ G V TWG N++C + + N
Sbjct: 492 VDVACGSFYAAIAFSCGSVGTWGVSTMLATKVAKDQLRDADAPNNQKCAKTINLFKPFNK 551
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
K + + G + ++ G VYS+G + LGH + + R + L+ ++
Sbjct: 552 -KVVALRAGPFHCLAITSSGAVYSWGMERNGRLGHGDNKNEERMRVIDALSSHVI----- 605
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
+ + + HT LT+ G++Y FG GQLG++ Q R PE V +
Sbjct: 606 -------VDASCGCF---HTAVLTKHGQVYVFGENSFGQLGLK---GQQPRLLPEVVPL 651
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPI-QALETLTVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G ++S G A++ +N P V +LK + VV IS + A
Sbjct: 199 CGT--SFGWGSNSS-GQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD-----A 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT+ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNSSGQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG-NDARLGHHTE 288
A + G+V +F G +D H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 310
++QAA G + +L RV S G+++R LG P P+ LE + V ++
Sbjct: 25 LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLTVDLVS 81
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 369
G + LA+ C V++ G G G+LG G + P+ I L ++ + V+ G
Sbjct: 82 CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCG 136
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
S G SFG G ++S G A++ +N P V +LK + VV IS +
Sbjct: 197 SLCGT--SFGWGSNSS-GQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
AHT LT+ GK++ FG GQLG + ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNSSGQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG-NDARLGHHTE 288
A + G+V +F G +D H+E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHSE 326
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 25/291 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV +G V+++G+ S GQLG G + + P+ I++L GI+IIQ + G ++
Sbjct: 54 GQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLA 113
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 114 LSEGGQVFSWGKNSQGQLGLGKEFPS-QDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGT 172
Query: 272 VYTFSWGND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+F WGN+ A G++ +P +G L N+ V+ I+ GY + L
Sbjct: 173 --SFGWGNNSAGQLALSGNNVPVQSYKPRS-IGALRNLGVIYISCGYEHTAVLT---QNG 226
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTW 385
V++ G G+LGH ++ P+L+E+ L Q + G++H A V G+V ++
Sbjct: 227 KVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQ---IDCGSYHTLAYVYTTGQVVSF 283
Query: 386 GWGRYGCLG---HGNEECE----SVPKVVQALNDVKAIHVATGDYTTFVVS 429
G G C H + E S + L DV+ H+ G Y FV +
Sbjct: 284 GRGP-SCRSSSTHPEAQIENFDISCLLSAEDLVDVQVKHIFAGTYANFVTT 333
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 11/264 (4%)
Query: 183 EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTS 241
EE P PIR+L+ +R+ + G ++ + G+V+A+G S G+ G V+G +
Sbjct: 32 EETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINF--T 89
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLG 299
P+ +++L I ++Q + G++ + LS G+V FSWG +++ LG E + +
Sbjct: 90 PKKIKTLTGIKIIQVSCGDYHSLALSEGGQV--FSWGKNSQGQLGLGKEFPSQDSPQRVR 147
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
+LE IP+ Q+AAG + AL+ + + G G+ PR I L
Sbjct: 148 SLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG--ALR 205
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
NL + ++ G H AV+ Q+G+V T+G G LGH + P++V+ ++ + + +
Sbjct: 206 NLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVS-QID 264
Query: 420 TGDYTTFV-VSEDGDVYSFGCGES 442
G Y T V G V SFG G S
Sbjct: 265 CGSYHTLAYVYTTGQVVSFGRGPS 288
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V+S+G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 103 QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGA 162
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ +S +G + +G +S G+ VQ K P+ + +L+N+ V+ + G
Sbjct: 163 HSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYK----PRSIGALRNLGVIYISCGYEH 218
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
TAVL++ G+V+TF + +LGH D P L+ ++ + V QI G + LA
Sbjct: 219 TAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQ-LVERIDGL-VSQIDCGSYHTLAY--- 273
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQL 358
VY+ G + G R+ HP IE F +
Sbjct: 274 -----VYTTGQVVSFGRGPSCRSSSTHPEAQIENFDI 305
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVP 404
+ K+P I + L + +V+ G H+ V GRV WG G G LG G + P
Sbjct: 33 ETKNPEPIRTLETLRVS--LVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTP 90
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
K ++ L +K I V+ GDY + +SE G V+S+G L G G + +P
Sbjct: 91 KKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQL-------GLGKEFPSQDSP 143
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
Q V SL+ I L AH+FAL+ SG + +G GQL + N +
Sbjct: 144 QRVRSLE-------GIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSY 196
Query: 525 NPERV 529
P +
Sbjct: 197 KPRSI 201
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLG 299
+P+ + +L+ + V + G + + GRV+ + G++ +LG + + P +
Sbjct: 36 NPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKI-K 94
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQL 358
TL I ++Q++ G + LAL+ G V+S G G+LG G + P+ + +
Sbjct: 95 TLTGIKIIQVSCGDYHSLALS---EGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEG 151
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG--CLGHGNEECESV-PKVVQALNDVKA 415
+ L VAAG H+ + G WG G L N +S P+ + AL ++
Sbjct: 152 IPL--AQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGV 209
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
I+++ G T V++++G V++FG LGH+ A +G PQLV ++++
Sbjct: 210 IYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG--------PQLV---ERIDG 258
Query: 476 RVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
V QI + HT A + +G++ +FG G
Sbjct: 259 LVSQIDCG-----SYHTLAYVYTTGQVVSFGRG 286
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRL 352
P P+ TLE + V ++ G + LA+ C V++ G G G+LG G + P+
Sbjct: 37 PEPI-RTLETLRVSLVSCGQEHSLAV-CHRG--RVFAWGAGSEGQLGTGEVKGINFTPKK 92
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALN 411
I+ L ++ + V+ G +H+ + + G+V +WG G LG G E + P+ V++L
Sbjct: 93 IKT--LTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLE 150
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ VA G +F +S G SFG G +++ +A N P+ + +L+
Sbjct: 151 GIPLAQVAAGGAHSFALSVSGT--SFGWGNNSA---GQLALSGNNVPVQSYKPRSIGALR 205
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N V+ IS HT LT++GK++ FG GQLG
Sbjct: 206 --NLGVIYISCGYE-----HTAVLTQNGKVFTFGDNSCGQLG 240
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +G+NS+GQL G+ + ++PR I +L+ + +I +
Sbjct: 155 AQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISC 214
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG +S G + G + PQLVE + + V Q G++ T
Sbjct: 215 GYEHTAVLTQNGKVFTFGDNSCG--QLGHSPSAQDRGPQLVERIDGL-VSQIDCGSYHTL 271
Query: 264 AVLSREGRVYTFSWGNDAR 282
A + G+V +F G R
Sbjct: 272 AYVYTTGQVVSFGRGPSCR 290
>gi|357436203|ref|XP_003588377.1| Regulator of chromosome condensation family protein [Medicago
truncatula]
gi|355477425|gb|AES58628.1| Regulator of chromosome condensation family protein [Medicago
truncatula]
Length = 433
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 182/390 (46%), Gaps = 45/390 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRT 209
AG H++ + G VYS+G + G+LG G+ +++ P ++ S + IRI+ AAGA +
Sbjct: 19 AGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIVGIAAGAYHS 78
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL------------VESLKNIFVVQAA 257
+ ++D G V+ +G + +G Y V L +L VE + ++
Sbjct: 79 LALADDGSVWCWGYNLYG--YYSVVPCLLNKFLELHPPDSSTLLLEEVEGKAQLKIISIK 136
Query: 258 IGNFFTAVLSREGRVYTFSWGN---DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
G + + G ++ WGN ++ G + ++ P P+ VV++A G
Sbjct: 137 AGGMMSLSIDNLGALWM--WGNCPHQSKEGIFSIVSNFTPTPVW-DFHGHTVVKVACGNE 193
Query: 315 YLLALAC-------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF-QLLNLQPVVV 366
+++AL + + YS G G+LG G D +P +++ F Q + +
Sbjct: 194 HIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDSHWSIYEI 253
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 425
A GA+H A V T+G G G LGHG + S+P++VQ L V + V G + T
Sbjct: 254 ACGAFHTAFV-----CWTFGLGENGQLGHGTTQSTSIPELVQELPQFVNLVSVDCGLFHT 308
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTN 484
VVS DGDV+S+G LG A G ++ L+P +V++ + VQ++
Sbjct: 309 CVVSSDGDVWSWGM--EKGLGLYPDARVVGEYSSDALSPLVVSNPYEAKFLEPVQVACG- 365
Query: 485 SIYWNAHTFALTESG-KLYAFGAGDKGQLG 513
AHT + + G K+++ G G G LG
Sbjct: 366 ----AAHTIIVAQEGYKVWSLGRGRSGVLG 391
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 32/245 (13%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVV-YSFGSNSSGQLGHGTTEEEWRPRPIRSLQ--- 195
+ C E+ A+ G S + ++ YS+G+N+ GQLG G TE+ P +++
Sbjct: 187 KVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDS 246
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVV 254
I + A GA T + + FG G+ +G T+ + P+LV+ L + +V
Sbjct: 247 HWSIYEIACGAFHTAFV-----CWTFGLGENGQLGHGT--TQSTSIPELVQELPQFVNLV 299
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH------PLLGT----LENI 304
G F T V+S +G V+ SWG + LG + + V + PL+ + + +
Sbjct: 300 SVDCGLFHTCVVSSDGDVW--SWGMEKGLGLYPDARVVGEYSSDALSPLVVSNPYEAKFL 357
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------EKHPRLIEQFQL 358
VQ+A G + + +A + G V+S+G G G LG+G+ D P L+E F
Sbjct: 358 EPVQVACGAAHTIIVAQE--GYKVWSLGRGRSGVLGNGNVVDCYIPTLVLWPPLVEDFHF 415
Query: 359 LNLQP 363
+P
Sbjct: 416 KQEEP 420
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 46/252 (18%)
Query: 303 NIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
N+P V +AAG + L LA VYS G G G+LG GS D+ P ++ +
Sbjct: 9 NLPFKVTAVAAGEAHTLLLAGDGR---VYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQES 65
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG------CL------GHGNEECESVPKVVQ 408
++ V +AAGA+H+ + DG V WG+ YG CL H + + + V+
Sbjct: 66 IRIVGIAAGAYHSLALADDGSVWCWGYNLYGYYSVVPCLLNKFLELHPPDSSTLLLEEVE 125
Query: 409 ALNDVKAIHVATGDYTTFVVSEDGDVYSFG-CGESASLGHNAIADGQGNRHANVLTPQLV 467
+K I + G + + G ++ +G C + G +I TP V
Sbjct: 126 GKAQLKIISIKAGGMMSLSIDNLGALWMWGNCPHQSKEGIFSIVSN--------FTPTPV 177
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGK----------LYAFGAGDKGQLGIELV 517
VV+++ N H AL G+ Y++G + GQLG+
Sbjct: 178 WDFH--GHTVVKVACGNE-----HIIALVSVGESYNGENDDLICYSWGNNNHGQLGL--- 227
Query: 518 NNQTERGNPERV 529
+ +R NPE V
Sbjct: 228 GDTEDRPNPEMV 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 140/335 (41%), Gaps = 51/335 (15%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
++ AAG T+L++ G+VY++G+ + G G + +L + S ++I +V
Sbjct: 12 FKVTAVAAGEAHTLLLAGDGRVYSWGRGTLGRLGLGSEQDQLFPAQVKFGSQESIRIVGI 71
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP----NDVEPHP------LLGTLE---N 303
A G + + L+ +G V+ WG + + P +E HP LL +E
Sbjct: 72 AAGAYHSLALADDGSVWC--WGYNLYGYYSVVPCLLNKFLELHPPDSSTLLLEEVEGKAQ 129
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ ++ I AG +++L+ G C K G S P + F +
Sbjct: 130 LKIISIKAG--GMMSLSIDNLGALWMWGNCPHQSKEGIFSIVSNFTPTPVWDFHGHTV-- 185
Query: 364 VVVAAGAWHAAV---VGQ------DGRVC-TWGWGRYGCLGHGNEECESVPKVVQALND- 412
V VA G H VG+ D +C +WG +G LG G+ E P++V+ +
Sbjct: 186 VKVACGNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQD 245
Query: 413 --VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
+A G + T V ++FG GE+ LGH + P+LV L
Sbjct: 246 SHWSIYEIACGAFHTAFV-----CWTFGLGENGQLGHGTT--------QSTSIPELVQEL 292
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
Q V +S+ ++ HT ++ G ++++G
Sbjct: 293 PQF---VNLVSVDCGLF---HTCVVSSDGDVWSWG 321
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 14/316 (4%)
Query: 127 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 185
G W + F L + + + G G+ + +T V+ G+NSSG LG G +
Sbjct: 5 GKWPI---FALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI 61
Query: 186 WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 243
PR I L G RI+ + G+G ++++ G+VY++G +++ ++ G T SP Q
Sbjct: 62 LEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
+ +L N + A G+ + VL+ +G VY + + N ++G + N P + L+N
Sbjct: 120 VSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
V+ IA G + ++A +G VY+ G G+LG GS ++ P I Q + ++
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 422
VV G H + +G + WG YG LG GN+ +S P +V+ + I
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294
Query: 423 YTTFVVSEDGDVYSFG 438
+T+ S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G +LG+GS P + L+N + + VA G+ H+ V+ DG V WG+
Sbjct: 95 VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAISVACGSHHSMVLTCDGEVYAWGY 153
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P KV L + I +A G ++ V ++G+VY++G + LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV Q+ + AHT ALT+ G +YA+GA
Sbjct: 214 LGS--------SGNQPTPCRIAALQGI--RVEQV-----VCGYAHTLALTDEGVMYAWGA 258
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P +V +D
Sbjct: 259 NSYGQLG---TGNKSNQSYPVQVIVD 281
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 133/282 (47%), Gaps = 18/282 (6%)
Query: 132 VLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 191
+++ L +A RR G HS+A+TS G VYS+GS G+LGHG + PR I
Sbjct: 283 LVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKI 342
Query: 192 RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LK 249
+L RI + G T ++SD V+ FG+ G G+ TK +PQ V + +
Sbjct: 343 MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNG--RLGLGDTKCHDTPQEVPTWGFR 400
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIP 305
+++ G FT LS EGRV FSWG + LG + +++ P + L+N
Sbjct: 401 KQRIIKVVCGWNFTIALSLEGRV--FSWGKQSEGQCGLG-FCDQDELSPCLIEKLLDN-R 456
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQP 363
+V +A GY + LAL Q V S G G G+LG G + P I+Q F P
Sbjct: 457 IVDVACGYTHSLALTSQ---HEVLSWGLGEYGQLGRGI-VYQPSPESIDQSLFACEGGHP 512
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+ GA+H+ + + WG YG G G+ +P+
Sbjct: 513 QRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPE 554
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 137/311 (44%), Gaps = 36/311 (11%)
Query: 232 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 291
G T + +PQ V+ L + + A G LS G VY+ D + TEP +
Sbjct: 221 GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS---SEDHAIST-TEPTN 276
Query: 292 VEPHPLL-------GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ P L L P++ IA G + +AL S VYS G G G+LGHG
Sbjct: 277 MLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALT---SAGEVYSWGSGEDGRLGHGEM 333
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
D PR I LL + V+ G H AVV V T+G GR G LG G+ +C P
Sbjct: 334 RDRNVPRKI--MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP 391
Query: 405 KVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+ V + I V G T +S +G V+S+G G G + L
Sbjct: 392 QEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCG-------LGFCDQDEL 444
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+P L+ L ++ R+V ++ + H+ ALT ++ ++G G+ GQLG +V
Sbjct: 445 SPCLIEKL--LDNRIVDVACGYT-----HSLALTSQHEVLSWGLGEYGQLGRGIVY---- 493
Query: 523 RGNPERVDIDL 533
+ +PE +D L
Sbjct: 494 QPSPESIDQSL 504
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 15/270 (5%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE- 246
P+ + L G I + A G + +S AG VY+ + E T ++ +PQLV+
Sbjct: 231 PQKVDVLPGQSIAEIACGGNHILYLSSAGDVYSSEDHAISTTE----PTNMLQTPQLVKE 286
Query: 247 -----SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
+L ++ A G + L+ G VY++ G D RLGH + P ++ L
Sbjct: 287 LTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALL 346
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+ + ++ G + ++ Q V++ G G G+LG G P+ + +
Sbjct: 347 RH-RIEYVSCGGSHTAVVSDQN---LVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQ 402
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVAT 420
+ + V G + +GRV +WG G G G ++ E P +++ L D + + VA
Sbjct: 403 RIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVAC 462
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G + ++ +V S+G GE LG +
Sbjct: 463 GYTHSLALTSQHEVLSWGLGEYGQLGRGIV 492
>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 1106
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 178/382 (46%), Gaps = 42/382 (10%)
Query: 164 GVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G V+S G + G + T + + P+P+ S + + Q A G L++ G+V+ +
Sbjct: 236 GEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWE 295
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---- 278
+++ G +G+Q V P+LVE L + A G + T +S G ++T WG
Sbjct: 296 EEAGGRLGHGIQVD--VCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFT--WGDGIH 351
Query: 279 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
N LGH ++ + P + G +E + V+ +A G + ALA + +++ G G G
Sbjct: 352 NVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG-TWHSALAT--ANGKLFTFGDGAFGV 408
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA----VVGQDG------RVCTWGWG 388
LGHG R +P+ ++ L L+ + VA G WH V+ Q G ++ TWG G
Sbjct: 409 LGHGDRESVSYPKEVK--MLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDG 466
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
LGHGN+E +P V +L D +A G T ++ G V++ G LG +
Sbjct: 467 DKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLG-S 525
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ +DG+ P LV + V E V +IS + H LT +++ +G G
Sbjct: 526 SNSDGK--------LPCLVQD-RLVGEFVEEISCGDH-----HVAVLTSRSEVFTWGKGS 571
Query: 509 KGQLGIELVNNQTERGNPERVD 530
G+LG ++ +R P V+
Sbjct: 572 NGRLG---HGDKDDRKTPTLVE 590
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 154/322 (47%), Gaps = 43/322 (13%)
Query: 212 ISDAGQVYAFGKD-SFGEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVL 266
I G VY +G+ S G + GV + V P+ +ES + V Q A G A++
Sbjct: 226 IESLGDVYVWGEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALV 285
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSG 325
+R+G V+T+ RLGH + + P + L NI V A G + A++ +
Sbjct: 286 TRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFV--ACGEYHTCAVS---TS 340
Query: 326 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+++ G G+ G LGHGS P+ + + LQ + VA G WH+A+ +G++
Sbjct: 341 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG-PVEGLQVLSVACGTWHSALATANGKLF 399
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGD 433
T+G G +G LGHG+ E S PK V+ L+ +K + VA G + T + E
Sbjct: 400 TFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRK 459
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
++++G G+ LGH GN+ +L P V+SL ++ QI+ HTF
Sbjct: 460 LFTWGDGDKNRLGH-------GNKETYLL-PTCVSSL--IDYNFNQIAC-------GHTF 502
Query: 494 --ALTESGKLYAFGAGDKGQLG 513
ALT SG ++ G GQLG
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLG 524
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 140/346 (40%), Gaps = 35/346 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS T+ G +++FG + G LGHG E P+ ++ L G++ ++ A G T+ I
Sbjct: 385 GTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444
Query: 213 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + +++ +G +G + T L+ P V SL + Q A G+ F
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL--PTCVSSLIDYNFNQIACGHTF 502
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T + +LG + P + L V +I+ G ++ L
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQDRLVGEFVEEISCGDHHVAVLT-- 559
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG-----AWHAAVVG 377
S V++ G G G+LGHG + D K P L+E + +++ + + H V G
Sbjct: 560 -SRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSICIHKWVSG 618
Query: 378 QDGRVCT-------WGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTT 425
D VC+ + R+ C G C + K A K V YT
Sbjct: 619 ADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTK 678
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
E G Y+ S DG G ++ + +++ S K
Sbjct: 679 LKAGESG--YNSNVANRNSTTPTRSLDGTGRPDRDIRSSRILLSPK 722
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 147/341 (43%), Gaps = 37/341 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H VT +G V+++ + G+LGHG + RP+ + L I A G
Sbjct: 274 QIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYH 333
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLKNIFVVQAAIG 259
T +S +G ++ +G G G+ G K V+ P VE L+ V+ A G
Sbjct: 334 TCAVSTSGDLFTWGD---GIHNVGLLGHGSDLSHWIPKRVSGP--VEGLQ---VLSVACG 385
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ +A+ + G+++TF G LGH + P + L + +++A G + +A+
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKE-VKMLSGLKTLKVACGVWHTVAI 444
Query: 320 A-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
S +++ G G +LGHG++ P + N +A G
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQ--IACGHTF 502
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSED 431
+ G V T G +G LG N + + +P +VQ L ++ GD+ V++
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNSDGK-LPCLVQDRLVGEFVEEISCGDHHVAVLTSR 561
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+V+++G G + LGH D + TP LV +L++
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRK--------TPTLVEALRE 594
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 166/363 (45%), Gaps = 40/363 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C F AG
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC--------VFGSAGN----------- 56
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTM 210
+ T ++ G+N G LG G + PR + +L G +I + G+G +
Sbjct: 57 ----EVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIV 112
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
L + G+V+ +G +++ + G LV + +L N V + A G++ + VL+ +G
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDG 171
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + N ++G + N P + G L+N VV IA G + ++A +G VY
Sbjct: 172 EVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYV 228
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG Y
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRV--ACGYAHTLVLTDEGQVYAWGANSY 286
Query: 391 GCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESAS 444
G LG GN+ +S P V D + A H A +T+ ++ G VY +G C G+S
Sbjct: 287 GQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVV 343
Query: 445 LGH 447
L H
Sbjct: 344 LPH 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + + V AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRIAALQGIRIQRVACGY-------AHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 10/292 (3%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA-G 216
+ VT V++ G+N SG LG G T+ PR + +L G +I + G+G ++++ A G
Sbjct: 35 LYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEG 94
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+VY +G +++ + G L+ Q+ +L N V + A G+ + +L+ +G VYT+
Sbjct: 95 EVYTWGHNAYSQLGNGTTNNSLLPC-QISTNLVNKKVTEVACGSHHSMILTSDGEVYTWG 153
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+ N ++G + N P + L+N V IA G + ++A +G VY G
Sbjct: 154 YNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACG--QMCSMAVVENG-EVYVWGYNGN 210
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LG G+ ++ P I Q + +Q VA G H V+ +G++ WG YG LG G
Sbjct: 211 GQLGLGNSGNQPTPCRIAALQGIRVQR--VACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268
Query: 397 NEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASL 445
N +S P + D V I +T+ ++ VY +G C G+S +L
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSITL 320
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 157/329 (47%), Gaps = 31/329 (9%)
Query: 185 EWRPRPIRSLQGIRIIQAA----AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240
+W RS + +++I+ A + + +++ +V+A G + G GV T+
Sbjct: 6 KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGC--LGVGDTQNSV 63
Query: 241 SPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 296
P+ +++L K I + G V + EG VYT WG++A +LG+ T N + P
Sbjct: 64 EPRRLDTLCGKKITCLSYGSGPH-VVVATAEGEVYT--WGHNAYSQLGNGTTNNSLLPCQ 120
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ L N V ++A G + + L S VY+ G G++G GS ++ PR +
Sbjct: 121 ISTNLVNKKVTEVACGSHHSMILT---SDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSC 177
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L N V +A G + V ++G V WG+ G LG GN + P + AL ++
Sbjct: 178 -LQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQ 236
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
VA G T V++++G +Y++G L G GNR +N P +T K +R
Sbjct: 237 RVACGYAHTLVLTDEGQMYAWGANSYGQL-------GTGNR-SNQSYPVPITVDK---DR 285
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFG 505
V++I+ +S + +A A T+ ++Y +G
Sbjct: 286 VIEIAACHSAHTSA---AKTQGSQVYMWG 311
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 28/249 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T++G VY++G N+ QLG+GTT P I + L ++ + A G+ +M
Sbjct: 83 SGP-HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSM 141
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VY +G ++ G+ G + + P+ V S L+N V A G + +
Sbjct: 142 ILTSDGEVYTWGYNNSGQVGSGSTANQAI--PRRVTSCLQNKIAVNIACGQMCSMAVVEN 199
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG N +P P + L+ I V ++A GY + L L + +
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---M 254
Query: 329 YSVGCGLGGKLGHGSRTDEKHP--------RLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
Y+ G G+LG G+R+++ +P R+IE + A +A Q
Sbjct: 255 YAWGANSYGQLGTGNRSNQSYPVPITVDKDRVIE---------IAACHSAHTSAAKTQGS 305
Query: 381 RVCTWGWGR 389
+V WG R
Sbjct: 306 QVYMWGQCR 314
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ + P I L+N + VA G+ H+ ++ DG V TWG+
Sbjct: 96 VYTWGHNAYSQLGNGTTNNSLLPCQIST-NLVNKKVTEVACGSHHSMILTSDGEVYTWGY 154
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ +++P+ V L + A+++A G + V E+G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
GN N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQMYAWGA 259
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P + +D
Sbjct: 260 NSYGQLG---TGNRSNQSYPVPITVD 282
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAA 203
++ ++ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ + A
Sbjct: 128 KKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIA 187
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G +M + + G+VY +G + G+ G G + +P + +L+ I V + A G T
Sbjct: 188 CGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQ--PTPCRIAALQGIRVQRVACGYAHT 245
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
VL+ EG++Y + + +LG N P P+ T++ V++IAA
Sbjct: 246 LVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPI--TVDKDRVIEIAA 291
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 21/297 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L I+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ VV I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313
Query: 387 WGRYGCLGHGNEECES----VPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSF 437
G + E + + ++ A + DV+ H+ G Y FV + + F
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQVSIILF 370
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG + P ++
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LND+K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQ-ALETLIVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L +++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P V +LK N VV IS + A
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALK--NLGVVYISCGD-----A 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT+ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 25/272 (9%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+I G +L+S+ G VY V T+ + P+++E+ I V Q A
Sbjct: 76 KIEAVGCGDDEVILLSEKGSVYR------------VDVTQALYLPRMLEAFCRIPVSQVA 123
Query: 258 IGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
G+ T L++EG+VYT WG ++R LG + + + +L +P+VQ++AG +
Sbjct: 124 CGSRHTVALTKEGQVYT--WGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDH 181
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
AL+ S V+ G G+LG G D P ++ LNL+ ++ G H A
Sbjct: 182 SFALSVSGS---VFGWGRNDCGQLGLGDSQDRCTPTSVDS---LNLKKTTSISCGKDHTA 235
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
++ + G V T+G G++G LGH + E P++V L K +A G Y T V+ E+ +
Sbjct: 236 ILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKI 295
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
YSFGC + LG + D + VL PQ+
Sbjct: 296 YSFGCNDQNQLGRS--NDSHPSVPLPVLLPQV 325
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 10/212 (4%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIR 198
EA CR SQ G H++A+T +G VY++G NS GQLG G P+ +RSL G+
Sbjct: 112 EAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMP 171
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++Q +AG + +S +G V+ +G++ G+ G+ ++ +P V+SL +
Sbjct: 172 LVQVSAGGDHSFALSVSGSVFGWGRNDCGQL--GLGDSQDRCTPTSVDSLNLKKTTSISC 229
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G TA+L++ G V+TF G +LGH++ N++ P L+ L V +IA G + L
Sbjct: 230 GKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPR-LVAELWGAKVTRIACGRYHTLV 288
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
L +YS GC +LG R+++ HP
Sbjct: 289 LQ---ENNKIYSFGCNDQNQLG---RSNDSHP 314
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 25/220 (11%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 355
+L IPV Q+A G + +AL + VY+ G G+LG G + P+ +
Sbjct: 110 MLEAFCRIPVSQVACGSRHTVALTKEGQ---VYTWGQNSRGQLGLGKKGCSISSPQCVRS 166
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDV 413
+ L V V+AG H+ + G V +GWGR C LG G+ + P V +LN
Sbjct: 167 LSGMPL--VQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
K ++ G T ++++ G V++FG G+ LGHN+ N L P+LV L
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNS--------SRNELRPRLVAEL--W 272
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+V +I+ HT L E+ K+Y+FG D+ QLG
Sbjct: 273 GAKVTRIACGR-----YHTLVLQENNKIYSFGCNDQNQLG 307
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS A++ G V+ +G N GQLG G +++ P + SL + + G
Sbjct: 174 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDH 233
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T +++ G V+ FG FG+ + +L P+LV L V + A G + T VL
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHNSSRNEL--RPRLVAELWGAKVTRIACGRYHTLVLQE 291
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLL 298
++Y+F + +LG + + P P+L
Sbjct: 292 NNKIYSFGCNDQNQLGRSNDSHPSVPLPVL 321
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 29/197 (14%)
Query: 328 VYSVGCG-----LGGKLGHGSRTDEKH----PRLIEQFQLLNLQPVV-VAAGAWHAAVVG 377
+ +VGCG L + G R D PR++E F + PV VA G+ H +
Sbjct: 77 IEAVGCGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRI---PVSQVACGSRHTVALT 133
Query: 378 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
++G+V TWG G LG G + C S P+ V++L+ + + V+ G +F +S G V+
Sbjct: 134 KEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFG 193
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G + LG + D Q + TP V SL ++ IS HT LT
Sbjct: 194 WGRNDCGQLG---LGDSQ-----DRCTPTSVDSLNL--KKTTSISCGKD-----HTAILT 238
Query: 497 ESGKLYAFGAGDKGQLG 513
+ G ++ FG+G GQLG
Sbjct: 239 KHGTVFTFGSGQFGQLG 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
+P++++A + VA G T ++++G VY++G LG G + ++
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLG-------LGKKGCSIS 159
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+PQ V SL + +VQ+S H+FAL+ SG ++ +G D GQLG+ + +
Sbjct: 160 SPQCVRSLSGMP--LVQVSAGGD-----HSFALSVSGSVFGWGRNDCGQLGL---GDSQD 209
Query: 523 RGNPERVD 530
R P VD
Sbjct: 210 RCTPTSVD 217
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 155/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G R G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG + P ++
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 124 -TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P V AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LND+K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNPERV 529
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQ-ALETLIVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L +++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G + +G S S G A++ +N P V +LK N VV IS + A
Sbjct: 199 CGTSFGWG---SNSAGQLALSGRNVPVQSN--KPLSVGALK--NLGVVYISCGD-----A 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT+ GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P + +L+ + ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
Length = 575
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 57/389 (14%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGRTMLISDA 215
I+V K VY++G+N QLG +E+ P + + ++ AG G T ++++
Sbjct: 173 ISVEKKTTVYAWGANRYSQLGGINLKEDTVLVPTVNEIMSNLKPNMMTAGLGCTFIVTND 232
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G +Y G G G ++ P ++ +F+ + A L+ G
Sbjct: 233 GCIYVCGHGQDGRLGLGTVNHVVIPRPIHLK----VFITKVASFYCGQHALALTGNGIVL 288
Query: 276 SWGND--ARLGHH------------------TEPND---------VEPHPLLGTLENIPV 306
SWG++ +LGH ++P +E + ++ T+ + +
Sbjct: 289 SWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVIDTISSKHI 348
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V IA G + A +++ GCG G LGHG K P+ +E F+ ++ V
Sbjct: 349 VDIACG---SDSSAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEAFKDYHVSK--V 403
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
A G WH + R+ +WG G YG LG+G P +V+ L + V G +F
Sbjct: 404 ACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWDISF 463
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTN 484
+S+DG ++S+ G+N D N + ++ PQL+ L ++++V + +
Sbjct: 464 ALSQDGYIWSW--------GYN--GDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGAS- 512
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLG 513
N H AL G+LY +GA DKG+LG
Sbjct: 513 ----NCHCVALAADGELYLWGANDKGRLG 537
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 37/293 (12%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHG--------------------------TTEEEWRPR 189
H++A+T G+V S+GSN GQLGHG W
Sbjct: 277 HALALTGNGIVLSWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMES 336
Query: 190 --PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
I ++ I+ A G+ + ISD+G+++ +G G +G T+ P+ VE+
Sbjct: 337 YMVIDTISSKHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGHG--DTETYKLPKKVEA 394
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
K+ V + A G + + + R++++ G+ +LG+ N ++P L+ L +I
Sbjct: 395 FKDYHVSKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQP-ILVEQLPHILWA 453
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
++ G+ AL+ ++S G + SR P+L+ + + + V +
Sbjct: 454 KVICGWDISFALS---QDGYIWSWGYNGDFMVNECSRLIVDEPQLLYRLADQDKKIVDLG 510
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHV 418
A H + DG + WG G LG+G++ +C + PK AL DVK H+
Sbjct: 511 ASNCHCVALAADGELYLWGANDKGRLGNGSDIKDC-NFPKPCTALADVKLTHL 562
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G H +A+ ++ ++S+G GQLG+G + +P + L I + G
Sbjct: 401 SKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWD 460
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAV 265
+ +S G ++++G + G+ +V PQL+ L ++ +V N
Sbjct: 461 ISFALSQDGYIWSWGYN--GDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGASNCHCVA 518
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVE-PHP 296
L+ +G +Y + + RLG+ ++ D P P
Sbjct: 519 LAADGELYLWGANDKGRLGNGSDIKDCNFPKP 550
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G HS A+T+ G V ++G G+LGHG +E++ RP+ + +L G R I A G+G +T+
Sbjct: 9 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 68
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
I+D V+++G +G+ G G KL P +ESL + VV+ G+ F+ L++
Sbjct: 69 CITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKS 125
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VYT+ G+ RLGH + + P + L+ ++ IA G + +AC SG VY
Sbjct: 126 GAVYTWGKGDFHRLGHGSVDHVRRPKK-VAALQGKKIISIATGSLH--CVACSDSG-EVY 181
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ G G+LG G+ T + PRL+ Q
Sbjct: 182 TWGDNDEGQLGDGTVTAIQRPRLVAALQ 209
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
V A G+ +A ++ G V T+ G RLGH + + P L+ L + IA G
Sbjct: 3 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACG 61
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
L C V+S G G GKLG G K P IE L L V V G+
Sbjct: 62 SGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVKVECGSQF 118
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ + + G V TWG G + LGHG+ + PK V AL K I +ATG S+ G
Sbjct: 119 SVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 178
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+VY++G + LG + Q P+LV +L+ + +V+++ +AHT
Sbjct: 179 EVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-----SAHT 223
Query: 493 FALTES 498
AL+ S
Sbjct: 224 LALSTS 229
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 19/188 (10%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTW 385
V + G G G+LGHG D+ P+L+E LL + + +A G+ A + D V +W
Sbjct: 22 VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSW 79
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G YG LG G + +P +++L + + V G + +++ G VY++G G+ L
Sbjct: 80 GDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRL 139
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
GH ++ +V P+ V +L+ ++++ I+ T S+ H A ++SG++Y +G
Sbjct: 140 GHGSV--------DHVRRPKKVAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWG 184
Query: 506 AGDKGQLG 513
D+GQLG
Sbjct: 185 DNDEGQLG 192
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S+A+T G VY++G +LGHG+ + RP+ + +LQG +II A G+ +
Sbjct: 115 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 174
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
SD+G+VY +G + E + G + P+LV +L+ +V+ G+ T LS
Sbjct: 175 SDSGEVYTWGDND--EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 227
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ +T V+S+G G+LG G ++ P I SL G+ +++ G+ ++
Sbjct: 62 SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 121
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ +G VY +GK F +G V P+ V +L+ ++ A G+ S G
Sbjct: 122 LTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 179
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
VYT+ ++ +LG T P L+ L+ +V++ G + LAL+
Sbjct: 180 VYTWGDNDEGQLGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALS 227
>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
Length = 1088
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 43/344 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + + G LI+ G+++++G+ G + + + P+LV+S
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMD--LDHPKLVDS 348
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVE---PHPLLGTLE 302
L I A G + T L++ G VYT WG D+R G E N P L G L+
Sbjct: 349 LNGIAAKSVACGEYQTCALTKAGEVYT--WG-DSRFGADFDCEENSRSRWLPQKLSGPLK 405
Query: 303 NIPVVQIAAGYCYLLAL-ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
I + +A G + + AC +++ G G G LGHG+ P+ +E L +
Sbjct: 406 GISISNVACGEWHTAVVSACG----RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCV 461
Query: 362 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ V A G+WH A + G++ TWG G G LGHG+ E + +P V L
Sbjct: 462 KSV--ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 519
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
D V+ G T ++ G VY+ G LG+ + +R A+V +
Sbjct: 520 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLS------SRDASVAIVE----- 568
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
++ E V+ ++++ Y H +LT +G++Y +G G GQLG+
Sbjct: 569 GKLKEEFVK-AISSGSY---HVASLTSTGRVYTWGKGAHGQLGL 608
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 32/295 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQL--GHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G + A+T G VY++G + G + W P+ + L+GI I A G T
Sbjct: 360 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 419
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
++S G+++ +G +FG +G ++ P+ VESL + V A G++ TA +
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHG--NLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDI 477
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
S G+++T+ G+ +LGH + P + L + Q++ G +
Sbjct: 478 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLP-TCVAPLVDCDFAQVSCGRMLTVG 536
Query: 319 LACQPSGMA-VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHA 373
L + M VY++G + G+LG+ S D +L E+F +++G++H
Sbjct: 537 L----TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEF------VKAISSGSYHV 586
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + GRV TWG G +G LG G+ + ++P V+AL D + +A G T +
Sbjct: 587 ASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAI 641
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G ++ +T+ G VY+ GS+ GQLG+ ++ + L+ + ++G+
Sbjct: 525 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSY 584
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ G+VY +GK + G+ G + + P VE+L + V A G+ FTA +
Sbjct: 585 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNL--PTFVEALGDKQVESIACGSNFTAAI 641
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
A+ G ++++ +Y+ GK S+G + L P+ +E+LKN ++ + G
Sbjct: 81 ASLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYE 140
Query: 262 FTAVLSREGRVYTFSWGNDAR---------------LGHHTEPNDVEPHPLLGTLENIPV 306
+ V + +G FSWG + + + ++P ++ T NI
Sbjct: 141 HSIVTTDKG---LFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSD--STFRNIK- 194
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPV 364
++ +G + L L + VYS G G G G G + + P I QF +L N +
Sbjct: 195 -KVCSGSDHSLVLNKDGT---VYSWGHGYFGATGLGKKDNVATPTKI-QFNKELENKLVL 249
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIH-VATG 421
+A G +H+ ++ D + ++GWG YG LGH + ++ PK ++++N I V G
Sbjct: 250 DIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFAG 309
Query: 422 DY-TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
+ T+F V E GDVYS+G GE +LG D Q NV P V SL + +
Sbjct: 310 SHATSFYVDEKGDVYSWGWGEGGTLG---FGDNQ-----NVYVPTQVKSLSNIKKIAAGF 361
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
HT ALT ++Y FG GQLG
Sbjct: 362 ---------KHTLALTNDNQVYVFGDNTFGQLG 385
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 147/319 (46%), Gaps = 25/319 (7%)
Query: 158 IAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+ +T +YS G S G LG + E P+ I +L+ II ++G +++ +D
Sbjct: 89 LMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDK 148
Query: 216 GQVYAFGKDSFGEAEYGVQGTKL------VTSPQLVESLKNIF--VVQAAIGNFFTAVLS 267
G ++++G+ G+ G +++ + PQ +++ + F + + G+ + VL+
Sbjct: 149 G-LFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLN 207
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLALACQPSG 325
++G VY++ G G + N P + LEN V+ IA G + L L S
Sbjct: 208 KDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILT---SD 264
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+YS G G G+LGH S D K+ P+ IE V A + V + G V
Sbjct: 265 NEIYSFGWGEYGQLGH-SENDTKNYYSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDV 323
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WGWG G LG G+ + VP V++L+++K I A G T ++ D VY FG
Sbjct: 324 YSWGWGEGGTLGFGDNQNVYVPTQVKSLSNIKKI--AAGFKHTLALTNDNQVYVFGDNTF 381
Query: 443 ASLG---HNAIADGQGNRH 458
LG +N D Q +
Sbjct: 382 GQLGSKQNNVFEDPQNDNQ 400
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 136 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI---R 192
+ R + +G HS+ + G VYS+G G G G + P I +
Sbjct: 182 FIKNSDSTFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNK 241
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
L+ ++ A G +++++ ++Y+FG +G+ + TK SP+ +ES+ +
Sbjct: 242 ELENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSST 301
Query: 253 VVQAAI-GNFFTAV-LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
+++ G+ T+ + +G VY++ WG LG N P + +L NI +IA
Sbjct: 302 KIKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVP-TQVKSLSNIK--KIA 358
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
AG+ + LAL VY G G+LG
Sbjct: 359 AGFKHTLALTNDNQ---VYVFGDNTFGQLG 385
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 14/316 (4%)
Query: 127 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 185
G W + F L + + + G G+ + +T V+ G+NSSG LG G +
Sbjct: 5 GKWPI---FALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI 61
Query: 186 WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 243
PR I L G RI+ + G+G ++++ G+VY++G +++ ++ G T SP Q
Sbjct: 62 IEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
+ +L N + A G+ + VL+ +G VY + + N ++G + N P + L+N
Sbjct: 120 VSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
V+ IA G + ++A +G VY+ G G+LG GS ++ P I Q + ++
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 422
VV G H + +G + WG YG LG GN+ +S P +V+ + I
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294
Query: 423 YTTFVVSEDGDVYSFG 438
+T+ S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G +LG+GS P + L+N + + VA G+ H+ V+ DG V WG+
Sbjct: 95 VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAISVACGSHHSMVLTCDGEVYAWGY 153
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P KV L + I +A G ++ V ++G+VY++G + LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV Q+ + AHT ALT+ G +YA+GA
Sbjct: 214 LGS--------SGNQPTPCRIAALQGI--RVEQV-----VCGYAHTLALTDEGVMYAWGA 258
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P +V +D
Sbjct: 259 NSYGQLG---TGNKSNQSYPVQVIVD 281
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 165/364 (45%), Gaps = 42/364 (11%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHI 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V + A G++ + VL+ +
Sbjct: 112 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N V IA G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESA 443
YG LG GN+ +S P V D + A H A +T+ ++ G VY +G C G+S
Sbjct: 286 YGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSV 342
Query: 444 SLGH 447
L H
Sbjct: 343 VLPH 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + A+++A G + V G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
[Arabidopsis thaliana]
Length = 1028
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 162/366 (44%), Gaps = 41/366 (11%)
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
+G + TTE+ P+ + S + A G +L++ G+++++G+ G+ +G+
Sbjct: 264 TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 323
Query: 234 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 289
+ P+ + S++ + A G+F T +++ G +Y SWG+ LGH E
Sbjct: 324 ETD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 379
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
+ P + G L+ + V +A G + +A S +++ G G G LGHG R
Sbjct: 380 SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSV 436
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 396
PR +E L+ L VA G WH A V G+V TWG G G LGHG
Sbjct: 437 PREVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 494
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ + + +P+ V +L + VA G T + G VY+ G LG N A G
Sbjct: 495 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN-- 551
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
P+ +V +V+ S+ + H LT ++Y +G G GQLG
Sbjct: 552 ------FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGN 599
Query: 517 VNNQTE 522
V N+ E
Sbjct: 600 VENKRE 605
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ A+T G +YS+G +++ LGHG W P+ + LQG+ + A G T
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 406
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
+++ +GQ++ FG +FG +G + + V P+ VESL + V + A G + TA
Sbjct: 407 AVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEV 464
Query: 265 --------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
V S G+V+T+ G +LGH + P ++ +L N + Q+A G+
Sbjct: 465 TNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-SLTNENICQVACGHSLT 523
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
++ + S VY++G G+LG+ + P +E ++ +A G++H AV+
Sbjct: 524 VS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVEASVEEIACGSYHVAVL 578
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+ TWG G G LGHGN E + P VV L + + + G T V+
Sbjct: 579 TSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 630
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 44/338 (13%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQ---LVESLKNIFVVQA---AIGNFFTAVLSRE 269
G V+ +G +S + G L ++ + L ++L++ V+ A A G +++++
Sbjct: 247 GDVFVWG-ESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQ 305
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G ++++ G +LGH E + +P + ++ + +A G + A+ Q + +
Sbjct: 306 GEIFSWGEGKGGKLGHGLETDAQKPK-FISSVRGLGFKSLACGDFHTCAIT-QSGDLYSW 363
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G LGHG+ + P+ + L L VA G WH AVV G++ T+G G
Sbjct: 364 GDGTHNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGDGT 422
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-------------SEDGDVYS 436
+G LGHG+ SVP+ V++L + VA G + T V S G V++
Sbjct: 423 FGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFT 482
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G GE LGH G+ +L P+ V SL NE + Q++ +S+ T + T
Sbjct: 483 WGDGEKGQLGH-------GDNDTKLL-PECVISL--TNENICQVACGHSL-----TVSRT 527
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVDIDL 533
G +Y G+ GQLG N T +GN PERV+ D+
Sbjct: 528 SRGHVYTMGSTAYGQLG-----NPTAKGNFPERVEGDI 560
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
++Q IA G H++ VT +G ++S+G G+LGHG + +P+ I S++G+ A G
Sbjct: 288 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACG 347
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 264
T I+ +G +Y++G + G P+ V L+ ++V A G + TA
Sbjct: 348 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTA 407
Query: 265 VLSREGRVYTFSWGNDA--RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
V++ G++ F++G+ LGH + P +VE L+G + V ++A G +
Sbjct: 408 VVASSGQL--FTFGDGTFGALGHGDRRSTSVPREVE--SLIGLI----VTKVACGVWHTA 459
Query: 318 ALA----------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
A+ S V++ G G G+LGHG + P + L N VA
Sbjct: 460 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVA 517
Query: 368 AGAWHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
G H+ V + R V T G YG LG+ + +V + + +A G Y
Sbjct: 518 CG--HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHV 575
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQ 454
V++ ++Y++G G + LGH + + +
Sbjct: 576 AVLTSKSEIYTWGKGLNGQLGHGNVENKR 604
>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
Length = 1077
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 43/344 (12%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + + G LI+ G+++++G+ G + + + P+LV+S
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMD--LDHPKLVDS 368
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVE---PHPLLGTLE 302
L I A G + T L++ G VYT WG D+R G E N P L G L+
Sbjct: 369 LNGIAAKSVACGEYQTCALTKAGEVYT--WG-DSRFGADFDCEENSRSRWLPQKLSGPLK 425
Query: 303 NIPVVQIAAGYCYLLAL-ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
I + +A G + + AC +++ G G G LGHG+ P+ +E L +
Sbjct: 426 GISISNVACGEWHTAVVSACG----RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCV 481
Query: 362 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ V A G+WH A + G++ TWG G G LGHG+ E + +P V L
Sbjct: 482 KSV--ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 539
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 470
D V+ G T ++ G VY+ G LG+ + +R A+V +
Sbjct: 540 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLS------SRDASVAIVE----- 588
Query: 471 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
++ E V+ ++++ Y H +LT +G++Y +G G GQLG+
Sbjct: 589 GKLKEEFVK-AISSGSY---HVASLTSTGRVYTWGKGAHGQLGL 628
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 32/295 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQL--GHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G + A+T G VY++G + G + W P+ + L+GI I A G T
Sbjct: 380 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 439
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
++S G+++ +G +FG +G ++ P+ VESL + V A G++ TA +
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHG--NLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDI 497
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
S G+++T+ G+ +LGH + P + L + Q++ G +
Sbjct: 498 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLP-TCVAPLVDCDFAQVSCGRMLTVG 556
Query: 319 LACQPSGMA-VYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHA 373
L + M VY++G + G+LG+ S D +L E+F +++G++H
Sbjct: 557 L----TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEF------VKAISSGSYHV 606
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
A + GRV TWG G +G LG G+ + ++P V+AL D + +A G T +
Sbjct: 607 ASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAI 661
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G ++ +T+ G VY+ GS+ GQLG+ ++ + L+ + ++G+
Sbjct: 545 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSY 604
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ G+VY +GK + G+ G + + P VE+L + V A G+ FTA +
Sbjct: 605 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNL--PTFVEALGDKQVESIACGSNFTAAI 661
>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1041
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 162/366 (44%), Gaps = 41/366 (11%)
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
+G + TTE+ P+ + S + A G +L++ G+++++G+ G+ +G+
Sbjct: 277 TGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 336
Query: 234 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 289
+ P+ + S++ + A G+F T +++ G +Y SWG+ LGH E
Sbjct: 337 ETD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 392
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
+ P + G L+ + V +A G + +A S +++ G G G LGHG R
Sbjct: 393 SCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSV 449
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 396
PR +E L+ L VA G WH A V G+V TWG G G LGHG
Sbjct: 450 PREVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHG 507
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ + + +P+ V +L + VA G T + G VY+ G LG N A G
Sbjct: 508 DNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN-- 564
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
P+ +V +V+ S+ + H LT ++Y +G G GQLG
Sbjct: 565 ------FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGN 612
Query: 517 VNNQTE 522
V N+ E
Sbjct: 613 VENKRE 618
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 24/292 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ A+T G +YS+G +++ LGHG W P+ + LQG+ + A G T
Sbjct: 360 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHT 419
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----- 264
+++ +GQ++ FG +FG +G + + V P+ VESL + V + A G + TA
Sbjct: 420 AVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIVTKVACGVWHTAAVVEV 477
Query: 265 --------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
V S G+V+T+ G +LGH + P ++ +L N + Q+A G+
Sbjct: 478 TNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-SLTNENICQVACGHSLT 536
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
++ + S VY++G G+LG+ + P +E ++ +A G++H AV+
Sbjct: 537 VS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVEASVEEIACGSYHVAVL 591
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+ TWG G G LGHGN E + P VV L + + + G T V+
Sbjct: 592 TSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 643
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 44/338 (13%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQ---LVESLKNIFVVQA---AIGNFFTAVLSRE 269
G V+ +G +S + G L ++ + L ++L++ V+ A A G +++++
Sbjct: 260 GDVFVWG-ESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQ 318
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G ++++ G +LGH E + +P + ++ + +A G + A+ Q + +
Sbjct: 319 GEIFSWGEGKGGKLGHGLETDAQKPK-FISSVRGLGFKSLACGDFHTCAIT-QSGDLYSW 376
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G LGHG+ + P+ + L L VA G WH AVV G++ T+G G
Sbjct: 377 GDGTHNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGDGT 435
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-------------SEDGDVYS 436
+G LGHG+ SVP+ V++L + VA G + T V S G V++
Sbjct: 436 FGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFT 495
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G GE LGH G+ +L P+ V SL NE + Q++ +S+ T + T
Sbjct: 496 WGDGEKGQLGH-------GDNDTKLL-PECVISL--TNENICQVACGHSL-----TVSRT 540
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVDIDL 533
G +Y G+ GQLG N T +GN PERV+ D+
Sbjct: 541 SRGHVYTMGSTAYGQLG-----NPTAKGNFPERVEGDI 573
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
++Q IA G H++ VT +G ++S+G G+LGHG + +P+ I S++G+ A G
Sbjct: 301 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACG 360
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 264
T I+ +G +Y++G + G P+ V L+ ++V A G + TA
Sbjct: 361 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTA 420
Query: 265 VLSREGRVYTFSWGNDA--RLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
V++ G++ F++G+ LGH + P +VE L+G + V ++A G +
Sbjct: 421 VVASSGQL--FTFGDGTFGALGHGDRRSTSVPREVE--SLIGLI----VTKVACGVWHTA 472
Query: 318 ALA----------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
A+ S V++ G G G+LGHG + P + L N VA
Sbjct: 473 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV--ISLTNENICQVA 530
Query: 368 AGAWHAAVVGQDGR--VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
G H+ V + R V T G YG LG+ + +V + + +A G Y
Sbjct: 531 CG--HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHV 588
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQ 454
V++ ++Y++G G + LGH + + +
Sbjct: 589 AVLTSKSEIYTWGKGLNGQLGHGNVENKR 617
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 13/313 (4%)
Query: 144 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
++E+ Q ++ G HS+ + G + S G N GQLG R I SL+ I+
Sbjct: 32 KKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNS--RIEQISSLEAQTIVDV 89
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ G ++ + D G +Y++G S G+ G +K T P+ + L N ++Q + GNF
Sbjct: 90 SCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFT-PKRITGLLNRKIIQISCGNFH 148
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
+ L+ +GRV FSWG + +LG ++ + L+ +L+ IP+VQ+ AG AL+
Sbjct: 149 SVALAEDGRV--FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALS 206
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
SG V++ G G+LG + + + L +L ++ G H AV+ +DG
Sbjct: 207 M--SG-TVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDG 263
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGC 439
V T+G YG LG + SVP+ ++ + + VA G Y T + V + SFG
Sbjct: 264 IVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSR-QVSQVACGRYHTLLYVFTCNRIVSFGK 322
Query: 440 GESASLGHNAIAD 452
G G++ +D
Sbjct: 323 GSQRQQGNDESSD 335
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAA 203
R+ Q G HS+A+ G V+S+G N GQLG G+ + P+ ++SL+GI ++Q
Sbjct: 137 RKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVT 196
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG +T +S +G V+A+G+++ G+ + K P V+SL+++ V + G T
Sbjct: 197 AGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHT 256
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
AVL+++G VYTF +LG + P + + V + L C
Sbjct: 257 AVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCN- 315
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQP 363
+ S G G + G+ +D+ + +L F + +L P
Sbjct: 316 ---RIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVP 353
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 23/298 (7%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+Y +G + FG+ + ++V + K V + +IG + L ++G + +
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
+LG + +E + +LE +V ++ G + +A+ + + +YS G G G
Sbjct: 61 NPYGQLGRKGNNSRIEQ---ISSLEAQTIVDVSCGTNHSVAMCDEGN---IYSWGDGSEG 114
Query: 338 KLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
+LG G + + P+ I LLN + + ++ G +H+ + +DGRV +WG + G LG G
Sbjct: 115 QLGTGKFSSKNFTPKRITG--LLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG 172
Query: 397 NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
++ ++ P++V++L + + V G TF +S G V+++G + LG +
Sbjct: 173 SQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGF------KN 226
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ P V SL+ + V IS HT L + G +Y FG GQLG
Sbjct: 227 DAKKGTFKPYAVDSLRDLG--VAYISCGEE-----HTAVLNKDGIVYTFGDDTYGQLG 277
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 29/198 (14%)
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+ G+ SR IEQ L Q +V V+ G H+ + +G + +WG G G LG
Sbjct: 67 GRKGNNSR--------IEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGT 118
Query: 396 GNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G ++ PK + L + K I ++ G++ + ++EDG V+S+G + LG
Sbjct: 119 GKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLG-------L 171
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
G++ N TPQLV SLK + +VQ++ S TFAL+ SG ++A+G + GQLG
Sbjct: 172 GSQIINQATPQLVKSLKGI--PLVQVTAGGS-----QTFALSMSGTVFAWGRNNAGQLGF 224
Query: 515 ELVNNQTERG--NPERVD 530
+ N ++G P VD
Sbjct: 225 K---NDAKKGTFKPYAVD 239
>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 22/241 (9%)
Query: 276 SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG + LGH + N+ P P+ +L+ V+Q+A G + AL S +YS G
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIK-SLKEKGVIQVAVGPQHCSALC---SSGQIYSWGI 56
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
GL G+LGHG+ D P+++ + N V +A GA H+A + QDG++ +WG G G L
Sbjct: 57 GLNGRLGHGNIQDSSAPKMLASTKK-NCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGEL 115
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G+G + P +V L D+ +VA G TTF + G ++S+G G+ L G
Sbjct: 116 GNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCL-------G 168
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G+R + L P LV ++ +R+++++ H ALTE GKL+ +G G G G
Sbjct: 169 LGDRE-DRLEPSLVRLREE--DRIIRVACGEH-----HCLALTEDGKLWGWGRGTGGCHG 220
Query: 514 I 514
+
Sbjct: 221 L 221
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 24/268 (8%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P+ ++SLK V+Q A+G + L G++Y++ G + RLGH + P L T
Sbjct: 21 PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTK 80
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+N VQIA G + L +YS G GL G+LG+G R D+ P L+ +L +L
Sbjct: 81 KNCTAVQIACGAAHSAYLT---QDGKLYSWGRGLNGELGNGERHDQWTPNLV--LRLRDL 135
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
VA G G + +WG G++GCLG G+ E P +V+ + + I VA G
Sbjct: 136 VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACG 195
Query: 422 DYTTFVVSEDGDVYSFGCGESA--SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
++ ++EDG ++ +G G LGH + VL+P L +R +
Sbjct: 196 EHHCLALTEDGKLWGWGRGTGGCHGLGHT----------SEVLSPH---KLPMPEDRTI- 241
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAG 507
+S++ + H+ LT G ++ FG+G
Sbjct: 242 VSMSCGRW---HSAYLTIRGDIFCFGSG 266
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 11/276 (3%)
Query: 168 SFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
S+G+ + LGHG+ E P+PI+SL+ +IQ A G + +GQ+Y++G G
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60
Query: 228 EAEYG-VQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
+G +Q + ++P+++ S KN VQ A G +A L+++G++Y++ G + LG+
Sbjct: 61 RLGHGNIQDS---SAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGN 117
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
+ P+ +L L ++ V +A G AC G+ ++S G G G LG G R
Sbjct: 118 GERHDQWTPNLVL-RLRDLVVSYVACG--TNTTFACTGGGL-LFSWGSGKHGCLGLGDRE 173
Query: 346 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 405
D P L+ + + + VA G H + +DG++ WG G GC G G+ P
Sbjct: 174 DRLEPSLVRLREEDRI--IRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPH 231
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ D + ++ G + + ++ GD++ FG G
Sbjct: 232 KLPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSGR 267
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 207
Q GP H A+ S G +YS+G +G+LGHG ++ P+ + S + +Q A GA
Sbjct: 34 QVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAA 93
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++ G++Y++G+ GE G + + +P LV L+++ V A G T +
Sbjct: 94 HSAYLTQDGKLYSWGRGLNGELGNGERHDQW--TPNLVLRLRDLVVSYVACGTNTTFACT 151
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G ++++ G LG + +EP L+ E ++++A G + LAL
Sbjct: 152 GGGLLFSWGSGKHGCLGLGDREDRLEP-SLVRLREEDRIIRVACGEHHCLALT---EDGK 207
Query: 328 VYSVGCGLGG--KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++ G G GG LGH S H + + + + V ++ G WH+A + G + +
Sbjct: 208 LWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTI----VSMSCGRWHSAYLTIRGDIFCF 263
Query: 386 GWGR 389
G GR
Sbjct: 264 GSGR 267
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G + A T G+++S+GS G LG G E+ P +R + RII+ A G
Sbjct: 138 SYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEH 197
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ G+++ +G+ + G +G+ T V SP + ++ +V + G + +A L+
Sbjct: 198 HCLALTEDGKLWGWGRGTGG--CHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLT 255
Query: 268 REGRVYTFSWGNDAR 282
G ++ F G R
Sbjct: 256 IRGDIFCFGSGRGFR 270
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 108 bits (269), Expect = 1e-20, Method: Composition-based stats.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 31/289 (10%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHP 296
P +V+ +I +++ + GN FT LS+EG VY++ GN LG + PN ++
Sbjct: 243 PSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQK 302
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--- 353
+NI IA G ++L+L Q G+ VYS G G GG+LGHG T E P+ I
Sbjct: 303 NGHLFQNIK--DIACGSNHVLSLDHQ--GI-VYSWGNGQGGRLGHGDETGENIPKEIIGL 357
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
Q+++L ++ AG +A + + WG G +G LG G P +++ L D
Sbjct: 358 RQYKIL-----MIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQ 412
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
K +A G + + +G +G + LG D N P+ + +L +
Sbjct: 413 KVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALD------RNFTQPKELVTLDK- 465
Query: 474 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
E++ QI+ H+ ALTE+G++Y+FG G+LG + + +
Sbjct: 466 -EKLYQIAAG-----PFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQ 508
Score = 104 bits (260), Expect = 1e-19, Method: Composition-based stats.
Identities = 95/398 (23%), Positives = 177/398 (44%), Gaps = 64/398 (16%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEE-------------WRPRPIRSLQGIRIIQAAAGAGRTM 210
G+V+++G + G+LG E+E ++P ++ I II+ + G T+
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ----AAIGNFFTAVL 266
+S G VY++G + G G Q + +P +++ KN + Q A G+ L
Sbjct: 266 ALSQEGHVYSWGLGNSGGLGQGEQNVSM--TPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G VY++ G RLGH E + P ++G L ++ I AG A++ +
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKNE-- 380
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
++ G GL G+LG G + P ++E + ++ +A G+ H+ + ++G+ WG
Sbjct: 381 -LFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVED--IALGSNHSLCILRNGKAMCWG 437
Query: 387 WGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+ G LG + + PK + L+ K +A G + + ++E+G++YSFG +
Sbjct: 438 SSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGK 497
Query: 445 LGHNAIADGQGNRHANVLTPQLVTS-------------------LKQVNERVVQIS---- 481
LG++ I NV P+ +T+ Q ++++ IS
Sbjct: 498 LGYDEI-------KGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQ 550
Query: 482 ------LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ +N+ F L + G++Y G+ GQLG
Sbjct: 551 LGGCEVIQAQCGFNSTVFLLND-GQMYVCGSNKYGQLG 587
Score = 90.1 bits (222), Expect = 3e-15, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 42/285 (14%)
Query: 268 REGRVYTFSWG--NDARLG--------HHTEPNDVEPHPLLGTL----ENIPVVQIAAGY 313
R G F+WG N+ RLG + E + E P ++ +I +++++ G
Sbjct: 202 RCGNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGN 261
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ------FQLLNLQPVVVA 367
+ LAL+ + VYS G G G LG G + P +I+ FQ N++ + A
Sbjct: 262 SFTLALSQEGH---VYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQ--NIKDI--A 314
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
G+ H + G V +WG G+ G LGHG+E E++PK + L K + + G+ ++
Sbjct: 315 CGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAA 374
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
+S +++ +G G LG + ANVL P ++ LK +++V I+L ++
Sbjct: 375 ISIKNELFIWGVGLHGRLG--------TGKTANVLKPVMLEDLK--DQKVEDIALGSN-- 422
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
H+ + +GK +G+ G+LG+E ++ E V +D
Sbjct: 423 ---HSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLD 464
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 105/427 (24%), Positives = 173/427 (40%), Gaps = 83/427 (19%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+N + IA G H +++ +G+VYS+G+ G+LGHG E P+ I L+ +I+ A
Sbjct: 308 QNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEA 367
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G G + IS +++ +G G G T V P ++E LK+ V A+G+ +
Sbjct: 368 GEGSSAAISIKNELFIWGVGLHG--RLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSL 425
Query: 265 VLSREGRVYTFSWGNDARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ R G+ + D +LG T + N +P L+ TL+ + QIAAG + +AL
Sbjct: 426 CILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELV-TLDKEKLYQIAAGPFHSIALT-- 482
Query: 323 PSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+YS G GKLG+ + + + PR I + A G + R
Sbjct: 483 -ENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIF-------------ARKTGLNDR 528
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+Y +++ +V Q L + I G +T + DG +Y G +
Sbjct: 529 R-----DKYQLFNQFDDQM-TVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNK 582
Query: 442 SASLGHNAIADGQ---GNR-------------------------------------HANV 461
LG + A G+ GN+ +V
Sbjct: 583 YGQLGFSKRAGGKDKDGNKMLINSNNDGNQGGMSGANDNDNDDDDNGIGGGFLQQNSDDV 642
Query: 462 LTPQLVTSLKQVNE-RVVQISLTNSIYWNA-------------HTFALTESGKLYAFGAG 507
L PQL L ++ + + V+ +IY +A H A+T G + +G
Sbjct: 643 LPPQLKKKLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRN 702
Query: 508 DKGQLGI 514
D GQLG+
Sbjct: 703 DNGQLGM 709
Score = 72.0 bits (175), Expect = 8e-10, Method: Composition-based stats.
Identities = 85/361 (23%), Positives = 154/361 (42%), Gaps = 51/361 (14%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
H +AVT +G + +G N +GQLG G + +P I+SLQ II A+G ++ +SD
Sbjct: 686 HVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSD 745
Query: 215 AGQVYAFGKDSFGEAEYGVQG-------------------------TKLVTSPQLVESLK 249
G+V G + FGE G+ TK+ +P++++ L+
Sbjct: 746 LGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGLE 805
Query: 250 NIFVVQAAIGNFFTAVLS---REGRVYTFSWGN--DARLGHHTEPNDVEPHPL-LGTLEN 303
+I + AA N A+ + +E + F+WG + GH + ND P + + L++
Sbjct: 806 SIGFI-AAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKD 864
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNL 361
+Q + G + +AL +G + G +G DEK P +E +
Sbjct: 865 TKFIQASCGSKHTIAL--DTTGHIWF---FGYKPSVGIEDFNDEKQFMPARLETPSKIQE 919
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV----QALNDVKAIH 417
+++G H V Q G V +G+G+ + N + S K Q N+ KA+
Sbjct: 920 PFKFISSGEEHNLAVTQSGLV--YGFGK-----NTNTKINSSHKEYLYFDQVENEEKAVL 972
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
A G + ++ G Y++G + G D ++ P ++ +K + ++
Sbjct: 973 TACGANHSVLIDTKGVPYTWGFVGNGRCGLKLEKDDAQQEQESLSAPTVIYFMKTLFQKE 1032
Query: 478 V 478
+
Sbjct: 1033 I 1033
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 115/494 (23%), Positives = 180/494 (36%), Gaps = 156/494 (31%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPI---------------- 191
Q AGP HSIA+T G +YSFG++ G+LG+ + + PR I
Sbjct: 470 QIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRR 529
Query: 192 -------------------RSLQGIRIIQAAAGAGRTMLISDAGQVY------------- 219
+ L G +IQA G T+ + + GQ+Y
Sbjct: 530 DKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLGFS 589
Query: 220 --AFGKDSFGEA----------EYGVQGTKL---------------------VTSPQLVE 246
A GKD G + G+ G V PQL +
Sbjct: 590 KRAGGKDKDGNKMLINSNNDGNQGGMSGANDNDNDDDDNGIGGGFLQQNSDDVLPPQLKK 649
Query: 247 SLKNIFVVQ---------------------AAIGNFFTAVLSREGRVYTFSWG--NDARL 283
L + +Q + G F ++ EG TF WG ++ +L
Sbjct: 650 KLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGA--TFGWGRNDNGQL 707
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA------CQPSGMAVY-SVGCGLG 336
G + V + +L++ ++ A+G + L L+ C SG + +G GL
Sbjct: 708 GMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLC--SGFNEFGELGIGLN 765
Query: 337 GKLGHGSRT-------DEKHPR-LIEQFQLLNLQPVVV---------AAGAWHAAVVGQD 379
G + DE + R LIE + L P ++ AAG H+ +
Sbjct: 766 STSGGADKKENPDEIYDENYQRQLIET--KIELTPKIIKGLESIGFIAAGKNHSIAIRTY 823
Query: 380 GR------VCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSED 431
R + TWG G +G GHG+ + + +P++V+ L D K I + G T +
Sbjct: 824 KRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTT 883
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G ++ FG S+G D + A + TP ++ E IS H
Sbjct: 884 GHIWFFG--YKPSVGIEDFNDEKQFMPARLETPS------KIQEPFKFISSGEE-----H 930
Query: 492 TFALTESGKLYAFG 505
A+T+SG +Y FG
Sbjct: 931 NLAVTQSGLVYGFG 944
>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
Length = 479
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 168/370 (45%), Gaps = 56/370 (15%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHSI ++++G YSFG NS GQLG G T P PI +L+G II AA G ++ ++D
Sbjct: 121 GHSILISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSLFVTD 180
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVLSREG 270
G VYA G + + G T+PQ++ + + +V+ G F+ +L G
Sbjct: 181 TGTVYACGDNKSAQCGLG------HTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNG 234
Query: 271 RVYTFSWGNDARLGHHTEPN------------DVEPHPL-----------LGTLENIPVV 307
+++F +LGH+T+ ++ P + + ++++ +V
Sbjct: 235 ALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVDIV 294
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
+ G + +A+ S YS G G G+LGH + DE PRLI+ F V
Sbjct: 295 DFSCGNNHTVAID---SKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVH 351
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
GA ++ V + G + +G + E PK VQ L V T + T+ V
Sbjct: 352 CGATYSLAVNEHGALFMFGQTKR------TGEANMYPKPVQDLTGWNIRSVGTSN-TSIV 404
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
++ D + ++G S + G G G+ + + P+ VT ++ +N + Q+++ S
Sbjct: 405 IAADDSLIAWGV--SPTYGEL----GTGDINKSTARPKEVTRMEGLN--ITQVAMGYS-- 454
Query: 488 WNAHTFALTE 497
HT L++
Sbjct: 455 ---HTLLLSD 461
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 63/359 (17%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
Q R+I + AG ++LIS G+ Y+FG++S G+ +G T+ + P+ + +LK ++
Sbjct: 109 QKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNII 166
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
AA+G + ++ G VY A+ G HT P + P + T P+V++ G
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVRYT--GAPIVKVGCGA 224
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----PRLIEQFQLL---------- 359
+ + L C A++S G G+LGH TD K+ +L F+++
Sbjct: 225 EFSMILDCN---GALHSFGLPEYGQLGH--NTDGKYFVTSTKLSYHFEMVPKHIAFFFEK 279
Query: 360 ----------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
++ V + G H + R +WG+G +G LGH + ESVP++++
Sbjct: 280 SKDGHVSPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKY 339
Query: 410 LND----VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
+ V+++H G + V+E G ++ FG + G+ N + P+
Sbjct: 340 FDSQARGVRSVHC--GATYSLAVNEHGALFMFGQTKRT---------GEAN-----MYPK 383
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK-GQLGIELVNNQTER 523
V L N R V S T + + L A+G G+LG +N T R
Sbjct: 384 PVQDLTGWNIRSVGTSNT--------SIVIAADDSLIAWGVSPTYGELGTGDINKSTAR 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 45/312 (14%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAG 207
A G HS+ VT G VY+ G N S Q G G TT + P +R G I++ GA
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAE 225
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL----------------------V 245
+M++ G +++FG +G+ + G VTS +L V
Sbjct: 226 FSMILDCNGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHV 285
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+K++ +V + GN T + + R Y++ +G RLGH + ++ P L+ ++
Sbjct: 286 SPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPR-LIKYFDSQA 344
Query: 306 --VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNL 361
V + G Y LA+ G G RT E +P+ ++ N+
Sbjct: 345 RGVRSVHCGATYSLAVNEH-----------GALFMFGQTKRTGEANMYPKPVQDLTGWNI 393
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVA 419
+ V + + V+ D + WG YG LG G+ + + PK V + + VA
Sbjct: 394 RSVGTSNT---SIVIAADDSLIAWGVSPTYGELGTGDINKSTARPKEVTRMEGLNITQVA 450
Query: 420 TGDYTTFVVSED 431
G T ++S+D
Sbjct: 451 MGYSHTLLLSDD 462
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 345 TDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
+ + HP L +F + +V A H+ ++ +G ++G G LG G+ +
Sbjct: 93 SKKTHPNLYTFHKFTEQKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRN 152
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHAN 460
+P+ + L IH A G + V++ G VY+ G +SA LGH
Sbjct: 153 IPEPIPTLKGFNIIHAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHT------------ 200
Query: 461 VLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TPQ++ T ++ +V++ + L +G L++FG + GQLG
Sbjct: 201 --TPQILVPTRVRYTGAPIVKVGCGAEF-----SMILDCNGALHSFGLPEYGQLG 248
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RTM 210
G HS A+T+ G V ++G G+LGHG +E++ RP+ + +L G R I A G+G +T+
Sbjct: 27 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 86
Query: 211 LISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
I+D V+++G +G+ G G KL P +ESL + VV+ G+ F+ L++
Sbjct: 87 CITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKS 143
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VYT+ G+ RLGH + + P + L+ ++ IA G + +AC SG VY
Sbjct: 144 GAVYTWGKGDFHRLGHGSVDHVRRPKK-VAALQGKKIISIATGSLH--CVACSDSG-EVY 199
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ G G+LG G+ T + PRL+ Q
Sbjct: 200 TWGDNDEGQLGDGTVTAIQWPRLVTALQ 227
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 119/257 (46%), Gaps = 19/257 (7%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P+LVE L + V A G+ +A ++ G V T+ G RLGH + + P L+ L
Sbjct: 10 PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEAL 68
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+ IA G L C V+S G G GKLG G K P IE L L
Sbjct: 69 LGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGL 125
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
V V G+ + + + G V TWG G + LGHG+ + PK V AL K I +ATG
Sbjct: 126 GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATG 185
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
S+ G+VY++G + LG + Q P+LVT+L+ + +V+++
Sbjct: 186 SLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------WPRLVTALQ--GKHIVKVT 235
Query: 482 LTNSIYWNAHTFALTES 498
+AHT AL+ S
Sbjct: 236 CG-----SAHTLALSTS 247
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 22/219 (10%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L+ L + V IA G + + A SG V + G G G+LGHG D+ P+L+E
Sbjct: 12 LVEHLNGMSVADIACGSAH--SAAITASG-HVLTWGKGRYGRLGHGDSEDQLRPKLVE-- 66
Query: 357 QLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
LL + + +A G+ A + D V +WG G YG LG G + +P +++L +
Sbjct: 67 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 126
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ V G + +++ G VY++G G+ LGH ++ +V P+ V +L+
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--G 176
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++++ I+ T S+ H A ++SG++Y +G D+GQLG
Sbjct: 177 KKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 210
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 10/253 (3%)
Query: 179 HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 238
HG RP+ + L G+ + A G+ + I+ +G V +GK +G +G +L
Sbjct: 1 HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL 60
Query: 239 VTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
P+LVE+L + A G+ T ++ + V+++ G+ +LG P+
Sbjct: 61 --RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK 118
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ +L + VV++ G + +AL SG AVY+ G G +LGHGS + P+ +
Sbjct: 119 -IESLAGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDFHRLGHGSVDHVRRPKKVAAL 174
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
Q + + +A G+ H G V TWG G LG G P++V AL +
Sbjct: 175 Q--GKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIV 232
Query: 417 HVATGDYTTFVVS 429
V G T +S
Sbjct: 233 KVTCGSAHTLALS 245
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G S+A+T G VY++G +LGHG+ + RP+ + +LQG +II A G+ +
Sbjct: 133 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 192
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
SD+G+VY +G + E + G + P+LV +L+ +V+ G+ T LS
Sbjct: 193 SDSGEVYTWGDND--EGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLALS 245
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G ++ +T V+S+G G+LG G ++ P I SL G+ +++ G+ ++
Sbjct: 80 SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 139
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ +G VY +GK F +G V P+ V +L+ ++ A G+ S G
Sbjct: 140 LTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 197
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
VYT+ ++ +LG T P L+ L+ +V++ G + LAL+
Sbjct: 198 VYTWGDNDEGQLGDGTVTAIQWPR-LVTALQGKHIVKVTCGSAHTLALS 245
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
HGN PK+V+ LN + +A G + ++ G V ++G G LGH D
Sbjct: 1 HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ- 59
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L P+LV +L + R + I+ + +A T +T+ ++++G GD G+LG
Sbjct: 60 -------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKLG 106
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 42/381 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG H++ + S G V+++G NSSGQLG G T +P + L I + A G G ++
Sbjct: 417 VAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSV 474
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G ++A+G + G+ G+ T+ + P L +I + A G+ + L G
Sbjct: 475 AVGSDGGIWAWGDNRRGQLGIGITATREI--PVQATGLASISALAA--GDSHSLALRGNG 530
Query: 271 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+T WG++A +LG T + + G + + +AAG + LAL + V
Sbjct: 531 SVWT--WGSNAYGQLGDGTAIDRATAAQVPGLTD---ITALAAGNHHSLALRNDGT---V 582
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ T K P + + V AG H+ V +G V WG
Sbjct: 583 WVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMR----AVEAGPAHSVAVHLNGTVWVWGNN 638
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G ++P V L V A VA G Y + + DG ++++G LG+
Sbjct: 639 DFGQLGDGTVTSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNG 696
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
T + ++ QV I+L N H+ AL G ++ +GA
Sbjct: 697 --------------TSGIQSTPAQVPGLTGVIALAAG---NGHSLALRTDGTVWGWGANS 739
Query: 509 KGQLGIELVNNQTERGNPERV 529
GQLG T R P +V
Sbjct: 740 FGQLGD---GTTTPRSTPTQV 757
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 166/407 (40%), Gaps = 56/407 (13%)
Query: 137 LAG-EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 195
LAG A N +A HS+A+ S G V+++G NS+GQLG GTT E R P++ L
Sbjct: 243 LAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTE--RATPVQVLG 300
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
+ AAGA ++ + D G V+A+G +S G+ G T +P V L ++ V
Sbjct: 301 LTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT--TTARPTPVQVPGLTSVIAVA 358
Query: 256 AAIGN-------FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
A G+ + L +G V+ + + + G P + V +
Sbjct: 359 AGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTP---------VQVSE 409
Query: 309 IAAGYCY----LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+ G L A+ + G V++ G G+LG G P + +
Sbjct: 410 LTGGTALVAGDLHAVVLKSDGT-VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAI----T 464
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G H+ VG DG + WG R G LG G +P L + A+ A GD
Sbjct: 465 ALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLASISAL--AAGDSH 522
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISL 482
+ + +G V+++G LG D R P L +T+L N
Sbjct: 523 SLALRGNGSVWTWGSNAYGQLGDGTAID----RATAAQVPGLTDITALAAGNH------- 571
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+ AL G ++ +G+ D GQLG V T R P +V
Sbjct: 572 --------HSLALRNDGTVWVWGSNDFGQLGDGTV---TSRKTPVQV 607
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 177/407 (43%), Gaps = 69/407 (16%)
Query: 135 FLLAGEACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 193
F L AC + A++ G H++A+ G V+++G N SGQLG+GT + R P++
Sbjct: 137 FTLTANACP----APAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATD--RATPVQV 190
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
++ AA ++ + G V+A+G + +G+ G + + T+P V L +
Sbjct: 191 PGLTSVMAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQR--TTPVQVLGLAGVTA 248
Query: 254 VQAAIGNFFTAVLS-------REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 304
+ AA GN T +S +G V+ +WG+++ +LG T P +LG
Sbjct: 249 L-AAGGNGTTVAISAHSLALRSDGTVW--AWGDNSAGQLGDGTTTERATPVQVLGLTS-- 303
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V +AAG + LAL + V++ G G+LG G+ T P Q+ L V
Sbjct: 304 -VTALAAGAFHSLALRDDGT---VWAWGNNSSGQLGDGTTTARPTP-----VQVPGLTSV 354
Query: 365 V-VAAGAW---------HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+ VAAG H+ + DG V WG+ G G + P V L
Sbjct: 355 IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGT 414
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
A+ GD V+ DG V+++G S LG +TP V
Sbjct: 415 AL--VAGDLHAVVLKSDGTVWAWGDNSSGQLGEG-------------VTP--------VR 451
Query: 475 ERVVQIS----LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
+ +Q+S +T + H+ A+ G ++A+G +GQLGI +
Sbjct: 452 AKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGIT 498
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 159/372 (42%), Gaps = 46/372 (12%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-- 213
HS+A+ S G V+++G N GQLG GT + P + L G+ + AA G G T+ IS
Sbjct: 205 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTAL-AAGGNGTTVAISAH 263
Query: 214 -----DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
G V+A+G +S G+ G T +P V L ++ + A G F + L
Sbjct: 264 SLALRSDGTVWAWGDNSAGQLGDGT--TTERATPVQVLGLTSVTALAA--GAFHSLALRD 319
Query: 269 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL-----LALAC 321
+G V+ +WGN++ +LG T P + G L ++ V G L +LA
Sbjct: 320 DGTVW--AWGNNSSGQLGDGTTTARPTPVQVPG-LTSVIAVAAGGGDDSLGMRGDHSLAL 376
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+ G V++ G L + G G P + + + AG HA V+ DG
Sbjct: 377 KSDGT-VWAWGYNLSRQFGDGMPATRTTPVQVSELT----GGTALVAGDLHAVVLKSDGT 431
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G LG G + P V L + A+ ATGD + V DG ++++G
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSVAVGSDGGIWAWGDNR 489
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LG A + P T L ++ ++H+ AL +G +
Sbjct: 490 RGQLGIGITATRE--------IPVQATGLASISALAAG---------DSHSLALRGNGSV 532
Query: 502 YAFGAGDKGQLG 513
+ +G+ GQLG
Sbjct: 533 WTWGSNAYGQLG 544
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 157/364 (43%), Gaps = 39/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+++GSN+ GQLG GT + + L I + AAG ++
Sbjct: 518 AGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITAL--AAGNHHSLA 575
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G + FG+ G ++ +P V L + V+A G + + G
Sbjct: 576 LRNDGTVWVWGSNDFGQLGDGTVTSR--KTPVQVSGLSAMRAVEA--GPAHSVAVHLNGT 631
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ WGN+ +LG T + P + G V +A G + LAL + ++
Sbjct: 632 VWV--WGNNDFGQLGDGTVTSRAMPVQVSGLTG---VTAVAVGVYHSLALRNDGT---LW 683
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+G+ + P + + + +AAG H+ + DG V WG
Sbjct: 684 AWGYNNVGQLGNGTSGIQSTPAQVPGLTGV----IALAAGNGHSLALRTDGTVWGWGANS 739
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G S P V L +V A++ G + T + + V+ +G + LG
Sbjct: 740 FGQLGDGTTTPRSTPTQVPGLTNVIALNA--GAFYTVALRSERSVWEWGSKSAGQLGDGT 797
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+ TP V+ L V NAH AL ++A+G +
Sbjct: 798 VT--------QKTTPVQVSGLTDVTALAAG---------NAHALALRTDRTVWAWGGNQR 840
Query: 510 GQLG 513
GQ+G
Sbjct: 841 GQIG 844
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 167/420 (39%), Gaps = 92/420 (21%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG---- 207
AG HS+A+ G V+++G+NSSGQLG GTT RP P++ +I AAG G
Sbjct: 309 AGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGGDDSL 366
Query: 208 -----RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
++ + G V+A+G + + G+ T+ T+P V L + A G+
Sbjct: 367 GMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATR--TTPVQVSELTGGTALVA--GDLH 422
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG--------------------- 299
VL +G V+ +WG+++ +LG P +P + G
Sbjct: 423 AVVLKSDGTVW--AWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDG 480
Query: 300 ------------------TLENIPV--------VQIAAGYCYLLALACQPSGMAVYSVGC 333
IPV +AAG + LAL S V++ G
Sbjct: 481 GIWAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGS---VWTWGS 537
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG G+ D + + +AAG H+ + DG V WG +G L
Sbjct: 538 NAYGQLGDGTAIDRATAAQVPGLTDI----TALAAGNHHSLALRNDGTVWVWGSNDFGQL 593
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G P V L+ ++A+ G + V +G V+ +G + LG DG
Sbjct: 594 GDGTVTSRKTPVQVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLG-----DG 646
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
A P V+ L V V +Y H+ AL G L+A+G + GQLG
Sbjct: 647 TVTSRA---MPVQVSGLTGVTAVAV------GVY---HSLALRNDGTLWAWGYNNVGQLG 694
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AGP HS+AV G V+ +G+N GQLG GT P + L G+ + A G ++
Sbjct: 618 AGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYHSLA 675
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G ++A+G ++ G+ G G + ++P V L + + A GN + L +G
Sbjct: 676 LRNDGTLWAWGYNNVGQLGNGTSGIQ--STPAQVPGLTGVIALAA--GNGHSLALRTDGT 731
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T P + G L N V+ + AG Y +AL + S V+
Sbjct: 732 VWGWGANSFGQLGDGTTTPRSTPTQVPG-LTN--VIALNAGAFYTVALRSERS---VWEW 785
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T + P Q+ L V +AAG HA + D V WG +
Sbjct: 786 GSKSAGQLGDGTVTQKTTP-----VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQR 840
Query: 391 GCLGHGNEECESVP 404
G +G G P
Sbjct: 841 GQIGDGTASIMPAP 854
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 33/372 (8%)
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGV 165
K IF +EAE Q ++Q C + G A + T
Sbjct: 6 KWPIFSLCSEAELQLVRQAC-----------VFGSA------------SNELLYTTVNDE 42
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N VV IA G + ++A +G V+ G G+LG GS
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 K-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 461
VV + + I +T+ ++ G VY +G C G+S +L H + A
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336
Query: 462 LTPQLVTSLKQV 473
TP + L V
Sbjct: 337 ATPAVTWRLLSV 348
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V G+V+ +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ GN+ TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 27/351 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY++GSNSS QL +++ P+ ++S ++++A G T +S G V + GK S
Sbjct: 286 VYAWGSNSSHQLAELGSDKIVFPKKVKSFGNSQMLEA--GQYCTFAVSGDGCVRSCGKGS 343
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLG 284
+G G + + + + I + ++ G + T L+ EG ++++ G+ +LG
Sbjct: 344 YGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGDGDYGKLG 403
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
H + P + G L VV ++AGY + AC +++ G G G+LG G
Sbjct: 404 HGSSLTHKSPKIIEGPLARRIVVCVSAGYRHS---ACVTQEGQLFTWGEGDYGRLGLGDN 460
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESV 403
T P L++ V G+ H V+ QDG V ++G G G LGHG+
Sbjct: 461 TSRNVPVLVKDIA----SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYR 516
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
PKV++++N + + G + +++ G V+S+GCG G G+ A +
Sbjct: 517 PKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACL---------GCGSPDATFMK 567
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P L+ L RVV I+ + H ALT + ++Y +G GQ G+
Sbjct: 568 PTLIDELTFT--RVVDIT-----SGDGHCMALTHNNEVYCWGNNAMGQCGL 611
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 16/281 (5%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQ-AA 203
R+ S + GH++A+T++G ++S+G G+LGHG++ P+ I RI+ +
Sbjct: 370 RKISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVS 429
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG + ++ GQ++ +G+ +G G ++ V P LV+ + + V G+ T
Sbjct: 430 AGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNV--PVLVKDIASAGSV--VCGSSHT 485
Query: 264 AVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
VL+++G V++F G++ +LGH P ++ ++ + ++ AG Y LAL
Sbjct: 486 LVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRP-KVIESINGMMFYKLCAGSQYSLAL--N 542
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
SG V+S GCG G T K P LI++ + V + +G H + + V
Sbjct: 543 DSGQ-VFSWGCGACLGCGSPDATFMK-PTLIDELTFTRV--VDITSGDGHCMALTHNNEV 598
Query: 383 CTWGWGRYG-C-LGHGNEECESVPKVVQALNDVKAIHVATG 421
WG G C LGH N SVP VQ LN+V ++ G
Sbjct: 599 YCWGNNAMGQCGLGHTNSPI-SVPTQVQQLNNVTIHQISAG 638
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 150 AIAGPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ G H++ + G+ V+SFG+ +G+LGHG T +RP+ I S+ G+ + AG+
Sbjct: 478 VVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQY 537
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ ++D+GQV+++G G P L++ L VV G+ L+
Sbjct: 538 SLALNDSGQVFSWG---CGACLGCGSPDATFMKPTLIDELTFTRVVDITSGDGHCMALTH 594
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
VY WGN+A LGH P V + L N+ + QI+AG + +A PS
Sbjct: 595 NNEVYC--WGNNAMGQCGLGHTNSPISVPTQ--VQQLNNVTIHQISAGTSHSIAYTAMPS 650
Query: 325 GMAVYS 330
V S
Sbjct: 651 DRHVIS 656
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 37 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 96
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 97 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 154
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 155 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 211
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 212 IYSFGLGGNGQLGTGSTSNRKSP 234
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 12/225 (5%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
R R I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 23 RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 81
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 304
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 82 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 138
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 139 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 193
Query: 365 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 194 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 356
+ +L +I +VQ+A GY + LAL+ V+ G G+LG G+ ++ P+L++
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 82
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL + + VAAG H+ V+ G + WG ++G LG +E VP ++++L K +
Sbjct: 83 -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 141
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
++ G+ T ++++G V++FG G LGHN+ + R L +VT + +
Sbjct: 142 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ- 200
Query: 477 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 525
HT A SG++Y+FG G GQLG +N+ T +GN
Sbjct: 201 --------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 240
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 302
++SL +I +VQ A G + + LS+ V F WG + +LG T+ LL +L
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 84
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
IP +Q+AAG + L SG A++ G G+LG D P L++ L + +
Sbjct: 85 GIPFMQVAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQK 139
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 421
V + G H A + ++G V T+G G YG LGH + E P+ V L +A G
Sbjct: 140 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGR 199
Query: 422 DYTTFVVSEDGDVYSFGCGESASLG 446
+T+ V G +YSFG G + LG
Sbjct: 200 QHTSAFVPSSGRIYSFGLGGNGQLG 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 90 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 149
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 150 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 207
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG + N P + G
Sbjct: 208 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 239
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 186/419 (44%), Gaps = 45/419 (10%)
Query: 100 ALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA 159
++D ++ + +A +L + L LR L R N+ A AG S A
Sbjct: 189 SVDRTVPEGVYNLIVQASSGNLTRTA----PLTLRVL--------RANTLA-AGGYFSAA 235
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
+ G V+S+G N+ GQLG TT P ++ + + G + +++ G+V
Sbjct: 236 IKPNGQVWSWGDNTYGQLGRATTSPS-DSTPTQASLINDAVSISLGEYHAIALTNDGRVV 294
Query: 220 AFGKDSFGEAEYG---VQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYT 274
G+D +G+ G GT T+P L +++ I V G + + L+ EG VY
Sbjct: 295 TLGRDDYGQLGDGPGDSSGTH--TAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYA 352
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + +LG T E L+ L + V+ +AAG + LAL S V++ G
Sbjct: 353 WGRNDVGQLGLGTITAPQESPALIPGLSD--VIALAAGDDHTLALKADGS---VWAWGDN 407
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G T P + + +AAG H+ + DG V TWG+ +G LG
Sbjct: 408 PNGELGTGDITPYSVPTAVSNLPGVK----AIAAGGNHSVALLADGTVRTWGYNNHGQLG 463
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+G+ +VP V L DV + +A G T V +G V ++G +S LG+ A Q
Sbjct: 464 NGSNTNSNVPVPVTGLTDV--VGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQ 521
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP V + R V+ LT I+ H AL + G + A+G+ +GQLG
Sbjct: 522 -------TTPVDVQGIP--TGRSVR-GLTAGIF---HALALLDDGSMVAWGSNVQGQLG 567
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
AG HS+A+TS+G VY++G N GQLG GT T + P I L +I AAG T+
Sbjct: 336 AGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALIPGLS--DVIALAAGDDHTL 393
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+A+G + GE G + P V +L + + AA GN A+L+ +G
Sbjct: 394 ALKADGSVWAWGDNPNGE--LGTGDITPYSVPTAVSNLPGVKAI-AAGGNHSVALLA-DG 449
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V T+ + N +LG+ + N P P+ G + VV IAAGY + LA+ S V +
Sbjct: 450 TVRTWGYNNHGQLGNGSNTNSNVPVPVTGLTD---VVGIAAGYEFTLAVLSNGS---VKA 503
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G +LG+G+ T ++ + Q + AG +HA + DG + WG
Sbjct: 504 WGHDDSFQLGNGATTGDQTTPVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQ 563
Query: 391 GCLGHGNEECESVPKVVQ 408
G LG G K V
Sbjct: 564 GQLGDGTPNSSDTAKPVS 581
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVA 419
L+ +AAG + +A + +G+V +WG YG LG +S P +ND A+ ++
Sbjct: 221 LRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLIND--AVSIS 278
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G+Y ++ DG V + G + LG DG G+ P L ++ + V
Sbjct: 279 LGEYHAIALTNDGRVVTLGRDDYGQLG-----DGPGDSSGTHTAPNLRDNILPAGIKAVA 333
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
+ H+ ALT G +YA+G D GQLG+ + E
Sbjct: 334 VQ-----AGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQE 371
>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
coralloides DSM 2259]
gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
2259]
Length = 827
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 174/390 (44%), Gaps = 43/390 (11%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAA 203
E S AG HS+A+ + G V+++G NS LG G E P P++ L G+R + A
Sbjct: 478 EASLVAAGKTHSLALLADGTVWAWGDNSFSALGLG-DEPGASPTPVQVPKLAGVRSL--A 534
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG ++ + G V A+G FG + G + + P+ + L I V A+G++++
Sbjct: 535 AGENSSLAVLANGTVMAWGYGLFG--QLGSESASIFQIPEPIFGLSGITAV--AMGHWYS 590
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
L +G V+++ + +LG T P + G + V IAAG + LAL
Sbjct: 591 LALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQ---VTAIAAGASHALALRADG 647
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ V++ G G LG G++T P ++ + + VAAG +H+ + +DG V
Sbjct: 648 T---VWAWGSNALGTLGDGTQTSRSTPVQVQGLTGV----IAVAAGEYHSLALREDGTVW 700
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG G LG P V L V+ +A G+ E G + +FG S
Sbjct: 701 SWGNNNEGQLGDVTASSRQSPGQVPGLAGVQ--RIAAGEKHALAAVEGGPLVAFGKNTSG 758
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
L G G R N + + SL+ N R + + AHT A+ G ++A
Sbjct: 759 QL-------GLGERKENQSRGE-IASLR--NPRGIAAGI-------AHTLAVAADGTVWA 801
Query: 504 FGAGDKGQLGIELVNNQTERGNPERVDIDL 533
+GA GQLG N +P+ + + L
Sbjct: 802 WGANATGQLG-----NGEAANSPQPITVKL 826
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 167/418 (39%), Gaps = 82/418 (19%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA------------- 202
+++A+ G V S+G+N SGQLG GT P P+ L G+ + A
Sbjct: 388 YAVALMGDGTVRSWGNNDSGQLGDGTYIRH-TPTPVPGLTGVTAVSAGEDHVVAVLSDGS 446
Query: 203 ------------------------------------AAGAGRTMLISDAGQVYAFGKDSF 226
AAG ++ + G V+A+G +SF
Sbjct: 447 PRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGDNSF 506
Query: 227 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 286
+ G+ G + SP V+ K V A G + + G V + +G +LG
Sbjct: 507 --SALGL-GDEPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQLGSE 563
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
+ P P+ G L I +A G+ Y LAL + V+S G G+LG G+ TD
Sbjct: 564 SASIFQIPEPIFG-LSGI--TAVAMGHWYSLALREDGT---VWSWGYNASGQLGDGT-TD 616
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
E+ PR + L Q +AAGA HA + DG V WG G LG G + S P
Sbjct: 617 ER-PRPGQVAGLT--QVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQ 673
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
VQ L V I VA G+Y + + EDG V+S+G LG + Q +P
Sbjct: 674 VQGLTGV--IAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQ--------SPGQ 723
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 524
V L V +R+ H A E G L AFG GQLG+ RG
Sbjct: 724 VPGLAGV-QRIAAG--------EKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRG 772
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 175/475 (36%), Gaps = 129/475 (27%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--------------------------- 184
AG H++A+ + G V+++GSN +GQLG GT
Sbjct: 182 AGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAGYSSLALR 241
Query: 185 ---------------------EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
E R P++ L +R+ AAG G ++ + G V A+G
Sbjct: 242 KDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGA 301
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ +G + G G L +P+ V K VV A + + +G V ++ D L
Sbjct: 302 NIYG--QLGDGGFSLEGNPRPVAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGSNVDGAL 359
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G N P + G + V ++ G Y +AL + V S G G+LG G+
Sbjct: 360 GVEQRSNSRVPSKVFGLTD---VATVSVGGYYAVALMGDGT---VRSWGNNDSGQLGDGT 413
Query: 344 ------------------RTDEKH---------PRLIEQFQLLNL----------QPV-- 364
E H PR+ Q + L PV
Sbjct: 414 YIRHTPTPVPGLTGVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQV 473
Query: 365 -------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
+VAAG H+ + DG V WG + LG G+E S P VQ
Sbjct: 474 PGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPGAS-PTPVQVPKLAGVRS 532
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
+A G+ ++ V +G V ++G G LG + S+ Q+ E +
Sbjct: 533 LAAGENSSLAVLANGTVMAWGYGLFGQLGSES------------------ASIFQIPEPI 574
Query: 478 VQISLTNSI---YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+S ++ +W ++ AL E G ++++G GQLG + ER P +V
Sbjct: 575 FGLSGITAVAMGHW--YSLALREDGTVWSWGYNASGQLGDGTTD---ERPRPGQV 624
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 120/287 (41%), Gaps = 35/287 (12%)
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT 287
E+G+ + + V L ++ V A GN L +G V+ +WG++ +LG T
Sbjct: 156 EWGLSYLRFDGGVRPVPGLTDVRAVSA--GNEHALALRTDGTVW--AWGSNFAGQLGDGT 211
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ + P ++G E I V AAGY +LA + G V++ G G+LG G+
Sbjct: 212 KTSRSTPVQVVGLTEVIAVS--AAGYS---SLALRKDGT-VWAWGDNESGQLGDGTMEGR 265
Query: 348 KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
P Q+L+L V +AAG H+ V DG V WG YG LG G E P+
Sbjct: 266 LTP-----VQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRP 320
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
V + VA +F V DG V S+G +LG + +N P
Sbjct: 321 VAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGV--------EQRSNSRVPSK 372
Query: 467 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V L V V + AL G + ++G D GQLG
Sbjct: 373 VFGLTDVATVSVG---------GYYAVALMGDGTVRSWGNNDSGQLG 410
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
A G + + ++ +G V WG L + V P P L V ++AG +
Sbjct: 139 AAGRYHSLMVRPDGTV--LEWG----LSYLRFDGGVRPVPGL-----TDVRAVSAGNEHA 187
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 375
LAL + V++ G G+LG G++T P Q++ L V+ V+A + +
Sbjct: 188 LALRTDGT---VWAWGSNFAGQLGDGTKTSRSTP-----VQVVGLTEVIAVSAAGYSSLA 239
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ +DG V WG G LG G E P VQ L+ V+ +A G + V DG V
Sbjct: 240 LRKDGTVWAWGDNESGQLGDGTMEGRLTP--VQVLDLVRVTGLAAGRGHSLAVLADGTVR 297
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G LG + +GN P V+ L V V ++ + S+ +FA+
Sbjct: 298 AWGANIYGQLGDGGFSL-EGNPR-----PVAVSKLTDV----VSVAASTSL-----SFAV 342
Query: 496 TESGKLYAFGAGDKGQLGIELVNN 519
G + ++G+ G LG+E +N
Sbjct: 343 HSDGTVSSWGSNVDGALGVEQRSN 366
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 72/190 (37%), Gaps = 61/190 (32%)
Query: 366 VAAGAWHAAVVGQDGRVCTWG--------------------------------------- 386
VAAG +H+ +V DG V WG
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYLRFDGGVRPVPGLTDVRAVSAGNEHALALRTDGTVW 197
Query: 387 -WGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG G LG G + S P V L +V A+ A Y++ + +DG V+++G ES
Sbjct: 198 AWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAA--GYSSLALRKDGTVWAWGDNESG 255
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG + +G+ LTP V L +V T H+ A+ G + A
Sbjct: 256 QLGDGTM-EGR-------LTPVQVLDLVRV---------TGLAAGRGHSLAVLADGTVRA 298
Query: 504 FGAGDKGQLG 513
+GA GQLG
Sbjct: 299 WGANIYGQLG 308
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 191
GE R AG H++AV + G V+++G+N++GQLG+G E P+PI
Sbjct: 772 GEIASLRNPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNG--EAANSPQPI 822
>gi|406602412|emb|CCH46028.1| Regulator of chromosome condensation [Wickerhamomyces ciferrii]
Length = 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 180/405 (44%), Gaps = 76/405 (18%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHG---TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
A T + ++ FGS S +LG G +E RPR L+ I+ A G T+ + D
Sbjct: 43 AKTQQLDIFVFGSGSMCELGLGPAAKNKEVKRPRLNPYLKDKGIVDFAVGGMHTLALDDK 102
Query: 216 GQVYAFGKDSFGEAEYGVQGTK---------------------LVTSPQLVESL-KNIFV 253
QV+++G + G K ++P LVE L K++ V
Sbjct: 103 NQVWSWGGNDSGVLGRDTSKVKEQLKDMDDAGSDDDEDGDLNEAESTPGLVEGLPKDLKV 162
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIP-VVQ 308
VQ A + +AVL G VY +WG N+ LG ND+ ++ + Q
Sbjct: 163 VQLAATDNLSAVLLENGEVY--AWGTFRCNEGILGFK---NDITKQSTPVKIDEFKEITQ 217
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP----- 363
+A+G ++L L + V++ G G +LG R+ E+ +L L+P
Sbjct: 218 LASGKDHILGLDTKG---VVFAWGNGQQLQLGR---------RISERNKLKTLEPREFGL 265
Query: 364 ---VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAI 416
V +++G +H + +DG+V TWG +YG G +E + SVP V+ L D K +
Sbjct: 266 ADVVYISSGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIV 325
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLG-------HNAIADGQGNRHANVLTPQLVTS 469
+A G++ T +SEDG VY+FG + +G + D GN + V P + +
Sbjct: 326 QIAAGEHHTLALSEDGSVYAFGRIDMFEIGIAKKDLPESTFRDVHGNARS-VPVPTKIPN 384
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
L + N + H+ A+TE G ++A+G G+ +G+
Sbjct: 385 LPKTR---------NIAVGSHHSLAITEDGVVFAWGFGETYAIGL 420
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAA 203
+E +Q +G H + + +KGVV+++G+ QLG +E + + R ++ +
Sbjct: 213 KEITQLASGKDHILGLDTKGVVFAWGNGQQLQLGRRISERNKLKTLEPREFGLADVVYIS 272
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+G I+ G+V +G + +G+ ++ L++ P VE L + +VQ A G
Sbjct: 273 SGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIVQIAAGEH 332
Query: 262 FTAVLSREGRVYTF 275
T LS +G VY F
Sbjct: 333 HTLALSEDGSVYAF 346
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLQGIRIIQAAAGAG 207
+G H A+T G V ++G N GQ G + E+ P + L +I+Q AAG
Sbjct: 273 SGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGSLISVPTEVEDLADKKIVQIAAGEH 332
Query: 208 RTMLISDAGQVYAFGK-DSFGEAEYGVQGTKL--------------VTSPQLVESL---K 249
T+ +S+ G VYAFG+ D F E G+ L V P + +L +
Sbjct: 333 HTLALSEDGSVYAFGRIDMF---EIGIAKKDLPESTFRDVHGNARSVPVPTKIPNLPKTR 389
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 293
NI A+G+ + ++ +G V+ + +G +G DVE
Sbjct: 390 NI-----AVGSHHSLAITEDGVVFAWGFGETYAIGLGPAGEDVE 428
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG GT +++ P+ ++SL GI +Q AAG
Sbjct: 31 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGA 90
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 91 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 148
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V +IA G + A PS
Sbjct: 149 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFV--PSSGR 205
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 206 IYSFGLGGNGQLGTGSTSNRKSP 228
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 12/225 (5%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
R R I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G K TSPQL++
Sbjct: 17 RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLK 75
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 304
SL I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L +
Sbjct: 76 SLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQ 132
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+V I G + AL + V++ G G G+LGH S + E +PR + F+L+
Sbjct: 133 KIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVT 187
Query: 365 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
+A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 188 EIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 356
+ +L +I +VQ+A GY + LAL+ V+ G G+LG G+ ++ P+L++
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 76
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL + + VAAG H+ V+ G + WG ++G LG +E VP ++++L K +
Sbjct: 77 -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 135
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
++ G+ T ++++G V++FG G LGHN+ + R L +VT + +
Sbjct: 136 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ- 194
Query: 477 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 525
HT A SG++Y+FG G GQLG +N+ T +GN
Sbjct: 195 --------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 234
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 245 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 302
++SL +I +VQ A G + + LS+ V F WG + +LG T+ LL +L
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 78
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
IP +Q+AAG + L SG A++ G G+LG D P L++ L + +
Sbjct: 79 GIPFMQVAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQK 133
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 421
V + G H A + ++G V T+G G YG LGH + E P+ V L +A G
Sbjct: 134 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGR 193
Query: 422 DYTTFVVSEDGDVYSFGCGESASLG 446
+T+ V G +YSFG G + LG
Sbjct: 194 QHTSAFVPSSGRIYSFGLGGNGQLG 218
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 84 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 143
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 144 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 201
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG + N P + G
Sbjct: 202 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 233
>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 671
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 174/375 (46%), Gaps = 52/375 (13%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
+AVT G ++++G N G+LG G T ++ P + L ++ A G ++ +S G
Sbjct: 1 MAVTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS--NVVSLAGGEKHSLAVSGDGS 58
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
V+++G +S G+ G + +T ++ + ++ G+ F +G
Sbjct: 59 VWSWGSNSAGQL-----GVESLTPASVLAPVHALYS-----GDDFHLFYDTDGDGT---- 104
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
D +P P L G +P+ +AAG + L L + V+S GC
Sbjct: 105 -GDICDDCPYDPFKTAPG-LSGCGNAVPM--LAAGTQFSLGLKTDGT---VWSWGCNTYA 157
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
LG G R D P+ +E V +AAG H + +DG V +WGW G LG G+
Sbjct: 158 TLGLGDRVDRNTPQKVEALS----NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGS 213
Query: 398 ---EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
+ ES PK V+A+++V AI T Y T ++ DG+V+S+G + LG Q
Sbjct: 214 IHEDTYESTPKKVEAISNVTAIAAQT--YHTQALTRDGNVWSWGSNDFGQLGMGD----Q 267
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+R A PQ V +L VV I+ + H+ A+T G+++A+G +GQLG+
Sbjct: 268 NDRDA----PQKVEALS----NVVAINAGGN-----HSLAVTRDGQVWAWGENSEGQLGL 314
Query: 515 ELVNNQTERGNPERV 529
+ +R P++V
Sbjct: 315 ---GDLWDRDAPQKV 326
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 17/241 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S+ + + G V+S+G N+ LG G + P+ + +L + AAG T+
Sbjct: 134 AGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALS--NAVALAAGDDHTLA 191
Query: 212 ISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ G V+++G + G+ G + ++P+ VE++ N+ + A + T L+R+G
Sbjct: 192 LTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQT--YHTQALTRDG 249
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+++ + +LG + ND + + L N VV I AG + LA+ V++
Sbjct: 250 NVWSWGSNDFGQLGMGDQ-NDRDAPQKVEALSN--VVAINAGGNHSLAVTRDGQ---VWA 303
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G D P+ +E + V + AG H + +DG V W WG+
Sbjct: 304 WGENSEGQLGLGDLWDRDAPQKVEALSNV----VAINAGGDHTLALTRDGSV--WAWGKN 357
Query: 391 G 391
G
Sbjct: 358 G 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 25/199 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE---EWRPRPIRSLQGIRIIQAAAGAGR 208
AG H++A+T G V+S+G N +GQLG G+ E E P+ + ++ + I AA
Sbjct: 184 AGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAI--AAQTYH 241
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T ++ G V+++G + FG+ G Q + +PQ VE+L N+ + A GN AV +R
Sbjct: 242 TQALTRDGNVWSWGSNDFGQLGMGDQNDR--DAPQKVEALSNVVAINAG-GNHSLAV-TR 297
Query: 269 EGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+G+V+ + ++ +LG P VE L N VV I AG + LAL
Sbjct: 298 DGQVWAWGENSEGQLGLGDLWDRDAPQKVE------ALSN--VVAINAGGDHTLALTRDG 349
Query: 324 SGMAVYSVGCGLGGKLGHG 342
S V++ G G++G G
Sbjct: 350 S---VWAWGKNGRGQIGTG 365
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AVT G V+++G NS GQLG G + P+ + +L + I AG T+
Sbjct: 287 AGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALSNVVAIN--AGGDHTLA 344
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFV 253
++ G V+A+GK+ G+ G +G L P ++ S +N ++
Sbjct: 345 LTRDGSVWAWGKNGRGQIGTG-EGQSLYNEPVHVIYSDENFYL 386
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 152/362 (41%), Gaps = 35/362 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+ T G V ++G N+SGQLG GTT + P + L G + +AG ++
Sbjct: 52 SGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAG--AVAVSAGGEYSLA 109
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V A+G +++G+ G T SP V L + + A GN L +G
Sbjct: 110 LLGDGTVRAWGNNTYGQLGDGT--TPHRASPGAVPGLSGVVAIAA--GNNHALALLSDGT 165
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V + + +LG T P +LG VV IAAG + LA+ + V +
Sbjct: 166 VRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG---VVAIAAGENHSLAVLADGT---VRAW 219
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P L+ + +AAGA H+ V DG V WG+ G
Sbjct: 220 GNNTYGRLGDGTTTQRTSPVLVSSLTGV----TAIAAGANHSLAVLADGTVRAWGYNASG 275
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G + P V L V I G + + DG ++G S LG +
Sbjct: 276 RLGDGTTTQRATPVAVPGLTGVTEISAGGGH--SLALLADGTARAWGSNVSGQLGDGTV- 332
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+N +P LV+SL V H+ AL G A+GA GQ
Sbjct: 333 -------SNRTSPVLVSSLTGVTALSAG---------GNHSLALLADGTARAWGANVSGQ 376
Query: 512 LG 513
LG
Sbjct: 377 LG 378
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 171/364 (46%), Gaps = 38/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G ++G+N SGQLG GTT + P + L G+ + AAG ++
Sbjct: 352 AGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAAL--AAGGYHSLA 409
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V A+G +++G+ G T T+P +V +L + + A G + L +G
Sbjct: 410 VLANGTVRAWGHNTYGQ--LGDGSTAQRTAPVVVPALTGVVSLTA--GYDHSLALLSDGT 465
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V +WGN+A +LG T P + G L N VV ++ G Y ALA G V
Sbjct: 466 VR--AWGNNASGQLGDGTTNQRGTPVQVSG-LTN--VVALSGGKLYH-ALALLSDGT-VR 518
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G + G+LG GS ++ P + L N+ V +AAG ++ + +G V +WG+G
Sbjct: 519 AWGYNMNGQLGDGSTSNRWTPVAVSG--LTNV--VAIAAGGDYSLALQSNGTVQSWGYGV 574
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LG + PK V + +V AI A G + DG VY++G + LG
Sbjct: 575 YGPLGRDYDTYSPTPKAVPGVTNVVAI--AAGANHVLALRADGTVYAWGRNDFGQLGDGT 632
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
R+ V P L VV I + W+ H+ AL G +YA+G
Sbjct: 633 TVQ----RNTPVQVPGLT--------NVVAI----ATGWD-HSLALRADGTVYAWGYNYA 675
Query: 510 GQLG 513
QLG
Sbjct: 676 RQLG 679
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 167/371 (45%), Gaps = 38/371 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV + G V ++G+N+ G+LG GTT + P + SL G+ I AAGA ++
Sbjct: 202 AGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAI--AAGANHSLA 259
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V A+G ++ G G T +P V L + + A G+ + R
Sbjct: 260 VLADGTVRAWGYNASGRLGDGT--TTQRATPVAVPGLTGVTEISAGGGHSLALLADGTAR 317
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+WG++ +LG T N P L+ +L V ++AG + LAL + A
Sbjct: 318 ----AWGSNVSGQLGDGTVSNRTSP-VLVSSLTG--VTALSAGGNHSLALLADGTARA-- 368
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G + G+LG G+ T P + + +AAG +H+ V +G V WG
Sbjct: 369 -WGANVSGQLGDGTTTQRTLPVGLPGLTGV----AALAAGGYHSLAVLANGTVRAWGHNT 423
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LG G+ + P VV AL V + + G + + DG V ++G S LG
Sbjct: 424 YGQLGDGSTAQRTAPVVVPALTGV--VSLTAGYDHSLALLSDGTVRAWGNNASGQLG--- 478
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG N+ TP V+ L V ++L+ + H AL G + A+G
Sbjct: 479 --DGTTNQRG---TPVQVSGLTNV------VALSGGKLY--HALALLSDGTVRAWGYNMN 525
Query: 510 GQLGIELVNNQ 520
GQLG +N+
Sbjct: 526 GQLGDGSTSNR 536
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 168/363 (46%), Gaps = 35/363 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV + G V ++G N+ GQLG G+T + P + +L G+ + AG ++
Sbjct: 402 AGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGV--VSLTAGYDHSLA 459
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV-LSREG 270
+ G V A+G ++ G+ G T +P V L N+ + G + A+ L +G
Sbjct: 460 LLSDGTVRAWGNNASGQLGDGT--TNQRGTPVQVSGLTNVVALSG--GKLYHALALLSDG 515
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V + + + +LG + N P + G L N VV IAAG Y LAL Q +G V S
Sbjct: 516 TVRAWGYNMNGQLGDGSTSNRWTPVAVSG-LTN--VVAIAAGGDYSLAL--QSNGT-VQS 569
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+ G LG T P+ + + V +AAGA H + DG V WG +
Sbjct: 570 WGYGVYGPLGRDYDTYSPTPKAVPGVTNV----VAIAAGANHVLALRADGTVYAWGRNDF 625
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G + P V L +V AI ATG + + DG VY++G + LG +
Sbjct: 626 GQLGDGTTVQRNTPVQVPGLTNVVAI--ATGWDHSLALRADGTVYAWGYNYARQLGDGST 683
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
A+ + TP V L VV ++ + + AL SG ++A+G G
Sbjct: 684 ANYR-------QTPAPVPGLTN----VVAVTAGGN-----QSLALLSSGAVHAWGDNSHG 727
Query: 511 QLG 513
+LG
Sbjct: 728 ELG 730
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 153/342 (44%), Gaps = 40/342 (11%)
Query: 184 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
E + RP+RS R ++ A+G ++L + G V A+G ++ G+ G T +SP
Sbjct: 33 EAVQARPLRSGS-PRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGT--TTQRSSPT 89
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTL 301
V L V A G ++ L +G V +WGN+ +LG T P+ P + G
Sbjct: 90 AVPGLAGAVAVSA--GGEYSLALLGDGTVR--AWGNNTYGQLGDGTTPHRASPGAVPGLS 145
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
VV IAAG + LAL + V + G G+LG G+ T + P +L L
Sbjct: 146 G---VVAIAAGNNHALALLSDGT---VRAWGYNAYGQLGDGTTTQRRTP-----VAVLGL 194
Query: 362 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
VV +AAG H+ V DG V WG YG LG G + P +V +L V AI A
Sbjct: 195 TGVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAI--AA 252
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G + V DG V ++G S LG DG + A TP V L V E I
Sbjct: 253 GANHSLAVLADGTVRAWGYNASGRLG-----DGTTTQRA---TPVAVPGLTGVTE----I 300
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
S H+ AL G A+G+ GQLG V+N+T
Sbjct: 301 SAGG-----GHSLALLADGTARAWGSNVSGQLGDGTVSNRTS 337
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 166/411 (40%), Gaps = 82/411 (19%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV + G V ++G N+SG+LG GTT + P + L G+ I +AG G ++
Sbjct: 252 AGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTGVTEI--SAGGGHSLA 309
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G A+G + G+ G + TSP LV SL + + A GN A+L+ +G
Sbjct: 310 LLADGTARAWGSNVSGQLGDGTVSNR--TSPVLVSSLTGVTALSAG-GNHSLALLA-DGT 365
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL----------------LGTLEN------------ 303
+ +LG T P L L L N
Sbjct: 366 ARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGHNTYG 425
Query: 304 ---------------IP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+P VV + AGY + LAL + V + G G+LG G+
Sbjct: 426 QLGDGSTAQRTAPVVVPALTGVVSLTAGYDHSLALLSDGT---VRAWGNNASGQLGDGTT 482
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
P Q+ L VV +G +HA + DG V WG+ G LG G+
Sbjct: 483 NQRGTP-----VQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRW 537
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P V L +V AI A GDY + + +G V S+G G LG +
Sbjct: 538 TPVAVSGLTNVVAI-AAGGDY-SLALQSNGTVQSWGYGVYGPLGR--------DYDTYSP 587
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
TP+ V + VV I+ + H AL G +YA+G D GQLG
Sbjct: 588 TPKAVPGVTN----VVAIAAGAN-----HVLALRADGTVYAWGRNDFGQLG 629
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ S G V ++G N +GQLG G+T W P + L ++ AAG ++ +
Sbjct: 507 HALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL--TNVVAIAAGGDYSLALQSN 564
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V S+G YG G T +P+ V + N+ + A + L +G V
Sbjct: 565 GTV-----QSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAIAAGANHVL--ALRADGTV 617
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
Y + + +LG T P + G L N VV IA G+ + LAL + VY+ G
Sbjct: 618 YAWGRNDFGQLGDGTTVQRNTPVQVPG-LTN--VVAIATGWDHSLALRADGT---VYAWG 671
Query: 333 CGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
+LG GS + + P + L N+ V V AG + + G V WG +G
Sbjct: 672 YNYARQLGDGSTANYRQTPAPVPG--LTNV--VAVTAGGNQSLALLSSGAVHAWGDNSHG 727
Query: 392 CLGHGNEECESVPKVVQAL 410
LG+G+ P V L
Sbjct: 728 ELGNGSTLTPPAPVAVTGL 746
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 16/290 (5%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N SG LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N V+ IA G + ++A +G VY G G+LG GS
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q V A G H V+ +G++ WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHN 448
V D + A H A +T+ ++ G VY +G C G+S L H+
Sbjct: 277 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVILPHH 323
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 16/243 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T+ G V+++G N+ QLG+GTT P I + L ++I+ A G+ ++
Sbjct: 83 SGP-HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 141
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 269
+++ G+V+A+G ++ G+ G + + P+ V L+N V+ A G + +
Sbjct: 142 VLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKVVMNIACGQMCSMAVVDT 199
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + +
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ---I 254
Query: 329 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
Y+ G G+LG G+++++ +P ++E+ +++ + A +A Q G V WG
Sbjct: 255 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE---IAACHSAHTSAAKTQGGHVYMWG 311
Query: 387 WGR 389
R
Sbjct: 312 QCR 314
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 147 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 202
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 127 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI 186
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G +M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 187 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRVAALQGIRVQRVACGYAH 244
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
T VL+ EG++Y + + +LG + N P P++ +E +++IAA
Sbjct: 245 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVV--VEKDRIIEIAA 291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+AV G VY +G N +GQLG G++ + P + +LQGIR+ + A G T++++D G
Sbjct: 193 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 252
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
Q+YA+G +S+G+ G + + +P +VE I + A +A ++ G VY +
Sbjct: 253 QIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 277 W--GNDARLGHHT 287
G L HHT
Sbjct: 312 QCRGQSVILPHHT 324
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 259
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 48/380 (12%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
VY FG+ +G + P+ + S + + + + G L++ G+V+ +G+ S
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGS 335
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--- 282
G + V + +P++VESL + V + G + T L+ G +YT WG++
Sbjct: 336 GGXLGHKVNMD--MGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYT--WGDNGSGID 391
Query: 283 -LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
+G + + P L G L + +A G ++ ++ + +++ G G G LGH
Sbjct: 392 LVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVS---TSGQLFTYGDGTFGVLGH 448
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRY 390
G P+ +E L ++ A G WH A + + G++ TWG G
Sbjct: 449 GKLESISQPKEVESLSGLWVK--AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDK 506
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LGHG++E + +P V L D + V+ G T ++ G VY+ G LG+
Sbjct: 507 GRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQA 566
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D + K +E V +IS + H ALT G LY +G G G
Sbjct: 567 KD----------KSIAIVGGKLKDEFVKEISSG-----SYHVAALTSKGSLYTWGMGANG 611
Query: 511 QLGIELVNNQTERGNPERVD 530
QLG+ + +R +P V+
Sbjct: 612 QLGL---GDTEDRNSPAVVE 628
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 30/287 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSG--QLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G + A+T G +Y++G N SG +G +W P + L G I A G
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
++S +GQ++ +G +FG +G + ++ P+ VESL ++V AA G + TA +
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLGHG--KLESISQPKEVESLSGLWVKAAACGPWHTAAIVEV 484
Query: 267 --------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
++ G+++T+ G+ RLGH + + P + L + VQ++ G +
Sbjct: 485 RADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP-TCVAQLVDHDFVQVSCGRMLTVG 543
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQFQLLNLQPVVVAAGAWHAA 374
L C + VY++G + G+LG+ D+ +L ++F +++G++H A
Sbjct: 544 LTCLGT---VYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEF------VKEISSGSYHVA 594
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+ G + TWG G G LG G+ E + P VV+AL D + +A G
Sbjct: 595 ALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACG 641
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 20/313 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT G V+ +G S G LGH + P+ + SL G+ + + G +T +
Sbjct: 315 GGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCAL 374
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ +G++Y +G + G G + + P +L L + A G + A++S G+
Sbjct: 375 THSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQ 434
Query: 272 VYTFSWGNDARLGHH-----TEPNDVEPHPLL-------GTLENIPVVQIAAGYCYLLAL 319
++T+ G LGH ++P +VE L G +V++ A L
Sbjct: 435 LFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRAD-----RL 489
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
G +++ G G G+LGHG + + P + Q L++ V V+ G +
Sbjct: 490 KFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQ--LVDHDFVQVSCGRMLTVGLTCL 547
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G V T G +G LG+ + +S+ V L D +++G Y ++ G +Y++G
Sbjct: 548 GTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWGM 607
Query: 440 GESASLGHNAIAD 452
G + LG D
Sbjct: 608 GANGQLGLGDTED 620
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G H A+TSKG +Y++G ++GQLG G TE+ P + +L+ ++ A G+G T
Sbjct: 588 SGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAA 647
Query: 212 I 212
I
Sbjct: 648 I 648
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G ++ +T G VY+ GS GQLG+ +++ L+ + + ++G+
Sbjct: 533 QVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYH 592
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
++ G +Y +G + G + G+ T+ SP +VE+L++ V A G+ FTA +
Sbjct: 593 VAALTSKGSLYTWGMGANG--QLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAI 648
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 35/347 (10%)
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS-KG 164
K IF +EAE Q ++Q C G+ + T+
Sbjct: 6 KWPIFSLCSEAELQLIRQAC------------------------VFGSAGNEVLYTTVND 41
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 223
++ G+N G LG G + PR + L G +I + G+G +L + G+V+ +G
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGH 101
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++
Sbjct: 102 NAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 160
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G + N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 161 GSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGS 217
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S
Sbjct: 218 SGNQPTPCRVSALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 275
Query: 404 PK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
P VV + + I +T+ ++ G VY +G C G+S L H
Sbjct: 276 PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP V++L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRVSALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 15 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 74
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ + + V P L++SL++ +V G TA L+
Sbjct: 75 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALT 132
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 133 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 189
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 190 IYSFGLGGNGQLGTGSTSNRKSP 212
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 12/223 (5%)
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
R I+SL I+I+Q A G ++ +S A +V+ +G++ +G+ G+ K TSPQL++SL
Sbjct: 3 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSL 61
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPV 306
I +Q A G + VL+ G + F WG + +LG + E + P+ LL +L + +
Sbjct: 62 LGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKI 118
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V I G + AL + V++ G G G+LGH S + E +PR + F+L+ +
Sbjct: 119 VYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQI 173
Query: 367 AAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
A G H +A V GR+ ++G G G LG G+ P V+
Sbjct: 174 ACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 26/234 (11%)
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 356
+ +L +I +VQ+A GY + LAL+ V+ G G+LG G ++ P+LI+
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS- 60
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL + + VAAG H+ V+ G + WG ++G LG +E VP ++++L K +
Sbjct: 61 -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 119
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
++ G+ T ++++G V++FG G LGHN+ + R L +VT
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT-------- 171
Query: 477 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 525
QI+ HT A SG++Y+FG G GQLG +N+ T +GN
Sbjct: 172 --QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 218
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 68 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 127
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 128 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 185
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 186 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 218
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 10/262 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+ + VV S+G GQLGHG T++ P + + G I+ GA T+
Sbjct: 19 AGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVA 78
Query: 212 ISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
S +G+ VY++G FG +G + P + +L+ + + Q + G+ ++ E
Sbjct: 79 RSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMEN 136
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+V ++ + LG T + P +L E I + +AAG + +A+ +Y
Sbjct: 137 KVLSWGRNQNGELGLGTTKDSHVPQKIL-AFEGIRIKMVAAGAEHSVAITEDGD---LYG 192
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G G LG G D P E+ + + V+V+ G H + G + T GW +Y
Sbjct: 193 WGWGRYGNLGLGDTNDRLIP---EKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249
Query: 391 GCLGHGNEECESVPKVVQALND 412
G LGHG+ E VP+ VQAL+D
Sbjct: 250 GQLGHGDFEDCLVPRKVQALSD 271
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 21/261 (8%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
V+ + G T L V ++ G D +LGH + + P L + +V + G
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKL-SAFDGQDIVSVTCG 72
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
Y +A + SG VYS G G G+LGHG +D P I Q L ++ + + G H
Sbjct: 73 ADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI--SCGDCH 128
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
V + +V +WG + G LG G + VP+ + A ++ VA G + ++EDG
Sbjct: 129 CLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 188
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
D+Y +G G +LG D L P+ V +++V +S W HT
Sbjct: 189 DLYGWGWGRYGNLGLGDTND--------RLIPEKVNI---DGDKIVMVSCG----WR-HT 232
Query: 493 FALTESGKLYAFGAGDKGQLG 513
+++ SG LY G GQLG
Sbjct: 233 ISISSSGGLYTHGWSKYGQLG 253
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V+ I+AG + +AL +G V S G G G+LGHG D P + F ++ V
Sbjct: 14 VLLISAGASHTVALL---TGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VS 68
Query: 366 VAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
V GA + + G+ V +WGWG +G LGHG+ +P ++AL ++ ++ GD
Sbjct: 69 VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCH 128
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
V+ + V S+G ++ LG D PQ + + + + ++V
Sbjct: 129 CLAVTMENKVLSWGRNQNGELGLGTTKDSH--------VPQKILAFEGIRIKMVAAG--- 177
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
H+ A+TE G LY +G G G LG+ + +R PE+V+ID
Sbjct: 178 ----AEHSVAITEDGDLYGWGWGRYGNLGL---GDTNDRLIPEKVNID 218
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H +AVT + V S+G N +G+LG GTT++ P+ I + +GIRI AAGA
Sbjct: 121 QISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEH 180
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I++ G +Y +G +G G +L+ ++ K +V + G T +S
Sbjct: 181 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK---IVMVSCGWRHTISISS 237
Query: 269 EGRVYTFSWGNDARLGH 285
G +YT W +LGH
Sbjct: 238 SGGLYTHGWSKYGQLGH 254
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 138/269 (51%), Gaps = 30/269 (11%)
Query: 138 AGEACCRREN--SQAIA---GPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--EEEWRPRP 190
AGE +R+ SQA G H +T +GV Y++G G+LGHG + + P P
Sbjct: 853 AGEVPVKRKPPLSQAAVVSCGQQHVALLTEEGV-YTWGKPHQGRLGHGQLLGDSGYVP-P 910
Query: 191 IR----SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
+R S+Q ++++ A G T+ + D G VYA+G ++G+ G+ T P LV
Sbjct: 911 MRVETLSIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQ--LGLGDWDRQTHPTLVT 967
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 306
LK++F V A G + +A L EGRV+ + WG +LG N +PH L+ ++N
Sbjct: 968 QLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPH-LVAAVQN--A 1024
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
VQ++ GY + L SG V++ GCGL G+LGHG+ P ++ Q + + V
Sbjct: 1025 VQVSTGYAHTAVLT--RSG-EVFTFGCGLHGQLGHGATDKVSIP---QRVQGIMGKVAQV 1078
Query: 367 AAGAWHAAVVGQDGRVCTWG-----WGRY 390
A G +H VV +V T+G W +Y
Sbjct: 1079 ACGLFHTVVVTSSQQVYTFGRHPQVWKQY 1107
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 40/262 (15%)
Query: 255 QAAI---GNFFTAVLSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLEN 303
QAA+ G A+L+ EG VYT+ + RLGH + P VE +++
Sbjct: 866 QAAVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVET----LSIQR 920
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ V+ +A G + LAL VY+ G G+LG G + HP L+ Q + ++
Sbjct: 921 VQVMAVACGQEHTLALC----DNGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLK--DVFC 974
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
V VA G +H+A + +GRV WGWG +G LG GN E + P +V A+ + A+ V+TG
Sbjct: 975 VAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQN--AVQVSTGYA 1032
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
T V++ G+V++FGCG LGH A V PQ V + + +V Q++
Sbjct: 1033 HTAVLTRSGEVFTFGCGLHGQLGHGAT--------DKVSIPQRV---QGIMGKVAQVAC- 1080
Query: 484 NSIYWNAHTFALTESGKLYAFG 505
++ HT +T S ++Y FG
Sbjct: 1081 -GLF---HTVVVTSSQQVYTFG 1098
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 157/345 (45%), Gaps = 45/345 (13%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVE--SLKNIFVVQAAIG 259
+ G L+++ G VY +GK G +G + G P VE S++ + V+ A G
Sbjct: 871 SCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACG 929
Query: 260 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYL 316
T L G ++WG+ +LG D + HP L T L+++ V +A G +
Sbjct: 930 QEHTLALCDNG---VYAWGSSTYGQLG--LGDWDRQTHPTLVTQLKDVFCVAVATGQYHS 984
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
AL + V+ G G+ G+LG G+ + P L+ Q V V+ G H AV+
Sbjct: 985 AALDGEGR---VWMWGWGVHGQLGQGNAENLNKPHLVAAVQ----NAVQVSTGYAHTAVL 1037
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ G V T+G G +G LGHG + S+P+ VQ + K VA G + T VV+ VY+
Sbjct: 1038 TRSGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYT 1096
Query: 437 FG---------CGESASLGHNAIADGQG-NRHANVLTPQLVTSLK---QVNERVVQIS-- 481
FG S + + Q +HA L+ +L L +V R+ Q+
Sbjct: 1097 FGRHPQVWKQYLQNSRRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAG 1156
Query: 482 ------LTNSIYWNA----HTFALTESGKLYAFGAGDKGQLGIEL 516
LT+S+ A + A+ SGK++ +G GQLGI++
Sbjct: 1157 AVHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQLGIDM 1201
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 14/316 (4%)
Query: 127 GSWKLVLRFLLAGEACCRRENSQAIAGPGHSIA-VTSKGVVYSFGSNSSGQLGHGTTEEE 185
G W + F L + + + G G+ + +T V+ G+NSSG LG G +
Sbjct: 5 GKWPI---FALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI 61
Query: 186 WRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-Q 243
PR I L G RI+ + G+G ++++ G+VY++G +++ ++ G T SP Q
Sbjct: 62 IEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY--SQLGNGSTNQALSPCQ 119
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
+ +L N A G+ + VL+ +G VY + + N ++G + N P + L+N
Sbjct: 120 VSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
V+ IA G + ++A +G VY+ G G+LG GS ++ P I Q + ++
Sbjct: 180 KTVIGIACG--QMSSMAVVDNG-EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGD 422
VV G H + +G + WG YG LG GN+ +S P +V+ + I
Sbjct: 237 VV--CGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294
Query: 423 YTTFVVSEDGDVYSFG 438
+T+ S+ G VY +G
Sbjct: 295 HTSAAKSQSGQVYMWG 310
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VYS G +LG+GS P + L+N + VA G+ H+ V+ DG V WG+
Sbjct: 95 VYSWGHNAYSQLGNGSTNQALSPCQVST-NLINKKAHSVACGSHHSMVLTCDGEVYAWGY 153
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P KV L + I +A G ++ V ++G+VY++G + LG
Sbjct: 154 NNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG 213
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV Q+ + AHT ALT+ G +YA+GA
Sbjct: 214 LGS--------SGNQPTPCRIAALQGI--RVEQV-----VCGYAHTLALTDEGVMYAWGA 258
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P +V +D
Sbjct: 259 NSYGQLG---TGNKSNQSYPVQVIVD 281
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 211
G HS+ +T G VY++G N+SGQ+G G+T + PR + S LQ +I A G +M
Sbjct: 135 GSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ D G+VYA+G + G+ G G + +P + +L+ I V Q G T L+ EG
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+Y + + +LG + N + +P+ ++ +V+IAA + + A SG VY
Sbjct: 253 MYAWGANSYGQLGTGNKSN--QSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQ-VYMW 309
Query: 332 GCGLGGK-----LGHGSRTDE-----KHPRLIEQFQLLNLQP 363
G G L H S TD+ P ++ ++LL+++P
Sbjct: 310 GQCRGQSVITPHLTHFSCTDDVFACFSTPAIM--WRLLSVEP 349
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 56/349 (16%)
Query: 184 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
+ + P+ ++S + + G +L++ GQ+Y++G++S G +GV V P+
Sbjct: 283 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPK 340
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLG 299
L++ V A G F T ++ G +Y +WG N LG + + +P +LG
Sbjct: 341 LIDEFNGSTVELADCGEFHTCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILG 398
Query: 300 TLENIPVVQIAAGYCYLLALACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
+E I Y+ A++C P S +++ G G G LGHG R PR
Sbjct: 399 QMEGI----------YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPRE 448
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+E L + + A G WH+A V G++ TWG G G LGHG+ EC +P
Sbjct: 449 VE--ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 506
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V L+ VA G T +S G VY+ G + + H V P
Sbjct: 507 CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPS--------------HDIVRAPS 552
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 513
+ E + S + H A L ++Y +G G GQLG
Sbjct: 553 CI-------EGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLG 594
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGA 206
A G H+ AVT+ G +Y++G +++G LG G+ W+P R + ++GI + + G
Sbjct: 353 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 412
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T ++ G+++ FG +FG +G + + + P+ VE+L ++AA G + +A +
Sbjct: 413 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRTIKAACGVWHSAAV 470
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 316
+ G+++T+ G+D RLGH D+E + + L+ Q+A G
Sbjct: 471 VSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDTTSFQQVACGQSIT 526
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL+ SG VY++G S + P IE L VA G H AV+
Sbjct: 527 VALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFVQEVACGFHHIAVL 576
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E +P +V+AL + V G +YT +
Sbjct: 577 NSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 628
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)
Query: 236 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 290
+ L+T L + LK+ + A + G + +++++G++Y SWG ++ RLGH
Sbjct: 278 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 333
Query: 291 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
PHP L N V++A + + + G G LG GS P
Sbjct: 334 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 393
Query: 351 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
R++ Q + + ++ ++ G WH A V +G++ T+G G +G LGHG+ ++P+ V+A
Sbjct: 394 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 451
Query: 410 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
LN + I A G + + V + G ++++G G+ LGH I L
Sbjct: 452 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI--------ECRL 503
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
P VT L + Q++ SI T AL+ SG++YA G D
Sbjct: 504 IPSCVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTAD 542
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 27/246 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS+G +++FG + G LGHG PR + +L G R I+AA G + +
Sbjct: 411 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAV 470
Query: 213 -------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ +G+++ +G G +G +L+ P V L Q A G T
Sbjct: 471 VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVA 528
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G+VY +G +D+ P + G L V ++A G+ ++ L
Sbjct: 529 LSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN--- 577
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQ 378
S VY+ G G G+LGHG P L++ + ++ VV A H + G
Sbjct: 578 SKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGT 637
Query: 379 DGRVCT 384
D C+
Sbjct: 638 DSTKCS 643
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 149 QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q +A H IAV SK VY++G S+GQLGHG TE P +++L+G ++ + G+
Sbjct: 564 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 623
Query: 208 RTMLI 212
T I
Sbjct: 624 YTATI 628
>gi|392423407|ref|YP_006464398.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus acidiphilus SJ4]
gi|391357873|gb|AFM43571.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Desulfosporosinus acidiphilus SJ4]
Length = 1910
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 26/336 (7%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
LA S AG GH++AV S V+S GSN+ GQLG+ +T P + L
Sbjct: 323 LAQPVQIDATKSTIAAGSGHTLAVRSDSTVWSAGSNTFGQLGNNSTANSSTPVQVSGLS- 381
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
I+ +AG +M + G V+ +G+ + G+ G ++P V L NI V
Sbjct: 382 -SIVGVSAGDSTSMALRSDGIVFVWGRGTEGQLGNGTYSNS--STPVQVPGLSNI--VSI 436
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCY 315
+ G + L ++G V+ + +G + LG++T P ++N+P + I AG +
Sbjct: 437 SCGGYHCMALRKDGAVFVWGYGYNGELGNNTYSCSATPL----QVQNLPKITCIGAGAYH 492
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
LA+A + +S G G+LG G+ T+ P ++ + N + V+ G +H+ +
Sbjct: 493 CLAVAYDGT---CWSWGYNNYGQLGDGTTTNRSIP--VQVIGITNAK--FVSGGMYHSVL 545
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
DG WGW YG LG G+ VP + + ++I VA G Y+T ++ D VY
Sbjct: 546 QSTDGSFYGWGWNAYGQLGKGDNGDSYVPAGMVGWSG-QSI-VACG-YSTTIIGNDNTVY 602
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
S G G LG +G N ++ L+ +L+
Sbjct: 603 STGYGGDGQLG-----NGTNNTSYTFVSTGLINTLR 633
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 212/488 (43%), Gaps = 64/488 (13%)
Query: 42 ESTPGEFPLAASPSIVLHVLTACNLDPQDLA---KLEATCSFFRQPANFAPDYQLSISEL 98
ST + A ++ LHV +D Q+L + PA+ A + ++ +
Sbjct: 49 RSTQSAASVRAGETVTLHVTA---VDAQNLTLHFSWTSNIGTLGSPADTATESEVVWTAP 105
Query: 99 AALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIA-GPGHS 157
+ C + +T + L S F+L+ C + A+A G H+
Sbjct: 106 S----CVPSGVTPTVTATVQNALGLSASAS------FVLSSSPTCI---APAVAVGTQHT 152
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTMLISDA 215
+ + G V+++G N GQLG GTT RP P++ L GIR + AA + ++ + D
Sbjct: 153 LLLRPDGTVWAWGPNDYGQLGDGTTTN--RPVPVQVGGLSGIRAV--AASSDHSLAVRDD 208
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G +S G+ G +L +P V L +I V A G+ ++ + +G V+ +
Sbjct: 209 GTVWAWGINSSGQLGDGTTNDRL--TPVQVAGLSSIKRVAA--GDGYSLAVHGDGTVWAW 264
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA----LACQPSGMAVYSV 331
+ +LG T + + P + G E VV+++A LL LA + G V++
Sbjct: 265 GINSSGQLGDGTTTDRLTPGRVKGLSE---VVEVSAAKYSLLGSAHVLAVRGDGT-VWAW 320
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQ------LLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
G G+LG G+ TD P + + + N P+ + G++ AV G DG V W
Sbjct: 321 GNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRG-DGTVWAW 379
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G G LG G S P V AL+ + A+ A+ D+ + +DG V+S+G + L
Sbjct: 380 GSNSTGQLGDGTTISRSRPAQVNALSGITAVS-ASSDH-ALAMRDDGTVWSWGKNTNGKL 437
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G A+ L P V L V S H+ ++ E GK +A+G
Sbjct: 438 GDETT--------AHRLIPVQVHGLSGVRSVAAGES---------HSVSVREDGKAWAWG 480
Query: 506 AGDKGQLG 513
G LG
Sbjct: 481 YRGMGLLG 488
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 18/296 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+AV + G ++++GSNS GQLG G+T P P+ L+ ++ AAA ++
Sbjct: 560 AGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLE--NVVGAAASFSVSLA 617
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G T ++P V L +I V + G+ L +G
Sbjct: 618 LRSDGTVWAWGLNSVGQ--LGDGSTINRSTPGPVGGLVHIVGVATSGGHSL--ALRNDGT 673
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +D +LG T N +P + G + + A +++ A V++
Sbjct: 674 VWAWGGNHDGQLGDGTTTNQPKPVQVSG------LSGVKAVAAAIVSSAVVRDNGTVWAW 727
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ TD P L+ + +A+G H + DG V WG Y
Sbjct: 728 GDNYSGQLGDGTTTDRLTPVLVSGLSGVK----ALASGNHHFLALRNDGTVWAWGDNYYS 783
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
LG G S P V+ L+DVK I A G+ + V +DG V+++G S LG+
Sbjct: 784 QLGDGTRTQRSTPVQVRGLSDVKLI--AAGENHSMAVRKDGTVWTWGLNTSGQLGN 837
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 54/398 (13%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
+AG + +R AG G+S+AV G V+++G NSSGQLG GTT + P ++ L
Sbjct: 236 VAGLSSIKR----VAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSE 291
Query: 197 IRIIQAAA----GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
+ + AA G+ + + G V+A+G + G+ G +L +P V L +
Sbjct: 292 VVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRL--TPVQVSELDGVK 349
Query: 253 VVQAAIGNFF-------TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 303
+ A+GN F + L+ G ++WG+++ +LG T + P + L
Sbjct: 350 AI--AVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQ-VNALSG 406
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I V ++ + ALA + G V+S G GKLG DE + Q+ L
Sbjct: 407 ITAVSASSDH----ALAMRDDGT-VWSWGKNTNGKLG-----DETTAHRLIPVQVHGLSG 456
Query: 364 V-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
V VAAG H+ V +DG+ WG+ G LG G VP VQ + +A+
Sbjct: 457 VRSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVP--VQTMGLTATAQIASHG 514
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+ V ED ++ +G S+SLG G G+ A+ + ++ +K V
Sbjct: 515 NRSLAVKEDNTLWVWG---SSSLGDL----GDGSTGAHPVPSSILDDVKAVAAG------ 561
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
N ++ A+ +G L+A+G+ GQLG N+
Sbjct: 562 ------NDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNR 593
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 164/386 (42%), Gaps = 50/386 (12%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA------ 203
++ G H +AV G V+++G+N SGQLG GTT + P + L G++ I
Sbjct: 301 SLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLS 360
Query: 204 -AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ ++ + G V+A+G +S G+ G ++ + P V +L I V A+ +
Sbjct: 361 NSNGSYSLAVRGDGTVWAWGSNSTGQLGDGTTISR--SRPAQVNALSGITAVSASSDHAL 418
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLAL 319
+ +G V+++ + +LG T + + P H L G V +AAG + +++
Sbjct: 419 --AMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSG------VRSVAAGESHSVSV 470
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQ 378
A G GL LG G+ P Q + L +A+ + V +
Sbjct: 471 REDGKAWAWGYRGMGL---LGDGAMFLSFVP-----VQTMGLTATAQIASHGNRSLAVKE 522
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
D + WG G LG G+ VP + L+DVKA VA G+ + V +G ++++G
Sbjct: 523 DNTLWVWGSSSLGDLGDGSTGAHPVPSSI--LDDVKA--VAAGNDYSLAVRNNGSLWAWG 578
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
LG + N LTP V L+ V S+ + AL
Sbjct: 579 SNSIGQLGDGST--------TNRLTPVPVNGLENVVGAAASFSV---------SLALRSD 621
Query: 499 GKLYAFGAGDKGQLGIELVNNQTERG 524
G ++A+G GQLG N++ G
Sbjct: 622 GTVWAWGLNSVGQLGDGSTINRSTPG 647
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 169/364 (46%), Gaps = 39/364 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
S+AV ++ +GS+S G LG G+T P P L ++ + AAG ++ + +
Sbjct: 516 RSLAVKEDNTLWVWGSSSLGDLGDGSTGAH--PVPSSILDDVKAV--AAGNDYSLAVRNN 571
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G ++A+G +S G+ G +L +P V L+N VV AA + L +G V+ +
Sbjct: 572 GSLWAWGSNSIGQLGDGSTTNRL--TPVPVNGLEN--VVGAAASFSVSLALRSDGTVWAW 627
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ +LG + N P P +G L +I V + G+ +LA + G V++ G
Sbjct: 628 GLNSVGQLGDGSTINRSTPGP-VGGLVHIVGVATSGGH----SLALRNDGT-VWAWGGNH 681
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLG 394
G+LG G+ T++ P Q+ L V A A ++ V +D G V WG G LG
Sbjct: 682 DGQLGDGTTTNQPKP-----VQVSGLSGVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLG 736
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G P +V L+ VKA+ A+G++ + DG V+++G + LG DG
Sbjct: 737 DGTTTDRLTPVLVSGLSGVKAL--ASGNHHFLALRNDGTVWAWGDNYYSQLG-----DGT 789
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ + TP V L V +++ H+ A+ + G ++ +G GQLG
Sbjct: 790 RTQRS---TPVQVRGLSDV--KLIAAG-------ENHSMAVRKDGTVWTWGLNTSGQLGN 837
Query: 515 ELVN 518
L++
Sbjct: 838 GLLD 841
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 39/366 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+S+AV G V+++GSNS+GQLG GTT RP + +L GI + A+ + + + D
Sbjct: 366 YSLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVNALSGITAVSAS--SDHALAMRDD 423
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+++GK++ G+ +L+ P V L + V A G + + +G+ + +
Sbjct: 424 GTVWSWGKNTNGKLGDETTAHRLI--PVQVHGLSGVRSVAA--GESHSVSVREDGKAWAW 479
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ LG P +G QIA+ LA+ + ++ G
Sbjct: 480 GYRGMGLLGDGAMFLSFVPVQTMGL---TATAQIASHGNRSLAVKEDNT---LWVWGSSS 533
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G LG GS P I L V VAAG ++ V +G + WG G LG
Sbjct: 534 LGDLGDGSTGAHPVPSSI-------LDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLG 586
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G+ P V L +V + A + + DG V+++G LG +
Sbjct: 587 DGSTTNRLTPVPVNGLENV--VGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGST---- 640
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
N TP V L +V ++ + H+ AL G ++A+G GQLG
Sbjct: 641 ----INRSTPGPVGGLVH----IVGVATS-----GGHSLALRNDGTVWAWGGNHDGQLGD 687
Query: 515 ELVNNQ 520
NQ
Sbjct: 688 GTTTNQ 693
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 16/190 (8%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHS+A+ + G V+++G N GQLG GTT + +P + L G++ + AA + + ++ D
Sbjct: 663 GHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIVS--SAVVRD 720
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G V+A+G + G+ G +L +P LV L + + A GN L +G V+
Sbjct: 721 NGTVWAWGDNYSGQLGDGTTTDRL--TPVLVSGLSGVKAL--ASGNHHFLALRNDGTVW- 775
Query: 275 FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+WG++ ++LG T P + G L ++ + IAAG + ++A + G V++ G
Sbjct: 776 -AWGDNYYSQLGDGTRTQRSTPVQVRG-LSDVKL--IAAGENH--SMAVRKDGT-VWTWG 828
Query: 333 CGLGGKLGHG 342
G+LG+G
Sbjct: 829 LNTSGQLGNG 838
>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
Length = 409
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 148/327 (45%), Gaps = 25/327 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFG-----SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAA 203
Q AG H VT + +Y++ ++ +GQLGHG T P+ + +L I + Q +
Sbjct: 25 QVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVS 84
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNF 261
G T+ ++D G VY+FG D +G G QG SP LV N V+Q + G+
Sbjct: 85 CGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRPVLQVSCGDA 144
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYLLALA 320
L++EG VYT+ G RLG TE + P + I V ++L
Sbjct: 145 HVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVHAGPDGSFILR-- 202
Query: 321 CQPSGMAVYSVGCGLGGKLG-----HGSRTDEKHPRLIEQFQLLNLQP------VVVAAG 369
+ + S G KLG G R+ + + + ++P V V+ G
Sbjct: 203 ---TNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKYNIVAVSPG 259
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVV 428
H+AV+ G + T+G +YG LG G+ +E ++V V +L VA GD +T +
Sbjct: 260 QTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACGDRSTVIA 319
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQG 455
+ D +YS G E+ LG A G+G
Sbjct: 320 TSDNLIYSCGFSENGRLGFAAGETGKG 346
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 141/306 (46%), Gaps = 44/306 (14%)
Query: 231 YGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-------AR 282
Y G KL +PQ +E K +Q + G+ AV++ E +YT W N +
Sbjct: 2 YSWGGGKL--TPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYT--WANAQGLTSMAGQ 57
Query: 283 LGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
LGH + P VE L+ I V Q++ G + + C AVYS G G
Sbjct: 58 LGHGDTASYKAPKRVEA------LDKIAVNQVSCGEDFTV---CVTDDGAVYSFGSDYYG 108
Query: 338 KLGHGSRTDEKH----PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
LG+G + D + P L+ F +N + V+ G H + ++G V TWG G +G L
Sbjct: 109 CLGNGDQGDGEDCACSPSLVSFF--VNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRL 166
Query: 394 GHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
G G E+ S P+ V + + ++++H G +F++ +G + S G E LG N+ A
Sbjct: 167 GIGTEDDHSSPQKVATRGRHGIRSVHA--GPDGSFILRTNGRLQSCGSNEHNKLGLNSCA 224
Query: 452 DGQGNRHANVLTP--QLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
G ++ + P T++K +++ +V +S + H+ + G L FG+
Sbjct: 225 KGLRSKQVSYDIPCNYNFTTVKPLSKYNIVAVSPGQT-----HSAVIDGFGHLITFGSNK 279
Query: 509 KGQLGI 514
GQLG+
Sbjct: 280 YGQLGV 285
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 167/378 (44%), Gaps = 39/378 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A TS G V+ +G N GQLG GTT + P + L G+ I AAG T
Sbjct: 373 AGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAI--AAGNYHTC 430
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ + V+ +G + +G+ G T ++P V L + V A GN+ T L+ G
Sbjct: 431 ALTGSDGVWCWGDNFYGQLGDGT--TTNRSTPGAVSGLPS-GVTAIAAGNYHTCALTSSG 487
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAV 328
V+ + + +LG T N P G + +P V IAAG + AL S V
Sbjct: 488 GVWCWGRNDSGQLGDGTTTNRSTP----GAVGGLPSGVTAIAAGDYHTCALM---SSGGV 540
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGW 387
+ G G+LG GS TD P + L + +AAG +H A+ G DG C WG
Sbjct: 541 WCWGLNNRGQLGDGSYTDSSTPVAVGG---LPSGVMAIAAGNYHTCALTGSDGVWC-WGT 596
Query: 388 GRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G S P V L + V AI A G+Y T ++ G V+ +G S LG
Sbjct: 597 NSDGQLGDGTTTNRSTPVAVSGLPSGVTAI--AAGNYHTCALTSSGGVWCWGYNLSGQLG 654
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
N TP V+ L V I+ + HT ALT SG ++ +G
Sbjct: 655 DGTTT--------NRSTPGAVSGLP---SGVTAIAAGDE-----HTCALTGSGGVWCWGD 698
Query: 507 GDKGQLGIELVNNQTERG 524
GQLG N++ G
Sbjct: 699 NYYGQLGDGTTTNRSTPG 716
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 162/378 (42%), Gaps = 39/378 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+TS G V+ +G N SGQLG G+ + P + L G+ I AAG T
Sbjct: 322 AGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAI--AAGGAHTC 379
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ +G V+ +G + +G+ G T ++P V L + V A GN+ T L+
Sbjct: 380 ARTSSGGVWCWGGNFYGQLGDGT--TTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSD 436
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 326
V+ WG++ +LG T N P G + +P V IAAG + AL S
Sbjct: 437 GVW--CWGDNFYGQLGDGTTTNRSTP----GAVSGLPSGVTAIAAGNYHTCALT---SSG 487
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+ G G+LG G+ T+ P + L +AAG +H + G V WG
Sbjct: 488 GVWCWGRNDSGQLGDGTTTNRSTPGAVGG---LPSGVTAIAAGDYHTCALMSSGGVWCWG 544
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G+ S P V L + +A G+Y T ++ V+ +G LG
Sbjct: 545 LNNRGQLGDGSYTDSSTPVAVGGLPS-GVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLG 603
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
N TP V+ L V I+ N HT ALT SG ++ +G
Sbjct: 604 DGTT--------TNRSTPVAVSGLP---SGVTAIAAG-----NYHTCALTSSGGVWCWGY 647
Query: 507 GDKGQLGIELVNNQTERG 524
GQLG N++ G
Sbjct: 648 NLSGQLGDGTTTNRSTPG 665
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 157/377 (41%), Gaps = 41/377 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG ++ A+TS G V+ +G N SGQLG G+ P + L G+ I AAG T
Sbjct: 271 AGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSGVTAI--AAGGAHTC 328
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+ +G + G+ G + ++P V L + V A G T + G
Sbjct: 329 ALTSSGGVWCWGGNDSGQLGDGSYTDR--STPGAVSGLPS-GVTAIAAGGAHTCARTSSG 385
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 326
V+ WG + +LG T + P G + +P V IAAG + AL
Sbjct: 386 GVW--CWGGNFYGQLGDGTTTDRSTP----GAVSGLPSGVTAIAAGNYHTCALTGSD--- 436
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+ G G+LG G+ T+ P + L +AAG +H + G V WG
Sbjct: 437 GVWCWGDNFYGQLGDGTTTNRSTPGAVSG---LPSGVTAIAAGNYHTCALTSSGGVWCWG 493
Query: 387 WGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G LG G S P V L + V AI A GDY T + G V+ +G L
Sbjct: 494 RNDSGQLGDGTTTNRSTPGAVGGLPSGVTAI--AAGDYHTCALMSSGGVWCWGLNNRGQL 551
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G + D TP V L V+ I+ N HT ALT S ++ +G
Sbjct: 552 GDGSYTDSS--------TPVAVGGLP---SGVMAIAAG-----NYHTCALTGSDGVWCWG 595
Query: 506 AGDKGQLGIELVNNQTE 522
GQLG N++
Sbjct: 596 TNSDGQLGDGTTTNRST 612
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 158/380 (41%), Gaps = 36/380 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+T G V+ +G N SGQLG G+ + P + L G+ I AAG T
Sbjct: 67 AGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAI--AAGGAHTC 124
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V +G + FG+ G + ++P V L + V A G T L G
Sbjct: 125 ALTSSGGVMCWGGNYFGQLGDGSYTDR--STPVAVSGLPS-GVTAIAAGGAHTCALMSSG 181
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + +LG + + P + G V IAAGY + AL V+
Sbjct: 182 GVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSE--VTAIAAGYAHTCALTGS---GGVWC 236
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS TD P + L +AAG + + G V WG
Sbjct: 237 WGDNGFGQLGDGSFTDSSTPAAVGG---LPSGVTAIAAGGRYTCALTSSGGVWCWGRNDS 293
Query: 391 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G+ S P V L + V AI A G T ++ G V+ +G +S LG +
Sbjct: 294 GQLGDGSFTNRSTPGAVGGLPSGVTAI--AAGGAHTCALTSSGGVWCWGGNDSGQLGDGS 351
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
D TP V+ L V I+ AHT A T SG ++ +G
Sbjct: 352 YTDRS--------TPGAVSGLP---SGVTAIAAG-----GAHTCARTSSGGVWCWGGNFY 395
Query: 510 GQLGIELVNNQTERGNPERV 529
GQLG T+R P V
Sbjct: 396 GQLGD---GTTTDRSTPGAV 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 154/364 (42%), Gaps = 33/364 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+T V+ +G N GQLG GTT P + L G+ I AAG T
Sbjct: 424 AGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGNYHTC 481
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+ +G++ G+ G T ++P V L + V A G++ T L G
Sbjct: 482 ALTSSGGVWCWGRNDSGQLGDGT--TTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSG 538
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG + + P + G V+ IAAG + AL V+
Sbjct: 539 GVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG--VMAIAAGNYHTCALTGSD---GVWC 593
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T+ P + L +AAG +H + G V WG+
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSG---LPSGVTAIAAGNYHTCALTSSGGVWCWGYNLS 650
Query: 391 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G S P V L + V AI A GD T ++ G V+ +G LG
Sbjct: 651 GQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGDEHTCALTGSGGVWCWGDNYYGQLGDGT 708
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
N TP V+ L V I+ +Y HT ALT SG + +G
Sbjct: 709 T--------TNRSTPGAVSGLP---SGVTAIAA--GVY---HTCALTGSGGVMCWGNNGD 752
Query: 510 GQLG 513
GQLG
Sbjct: 753 GQLG 756
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 143/339 (42%), Gaps = 39/339 (11%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
LQG+ I AAG+ T ++ +G+V+ +G + G+ G + ++P V L + V
Sbjct: 59 LQGVTAI--AAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDR--STPVAVSGLPS-GV 113
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
A G T L+ G V WG + +LG + + P + G V IAA
Sbjct: 114 TAIAAGGAHTCALTSSGGV--MCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG--VTAIAA 169
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + AL S V+ G L G+LG GS P + L + +AAG
Sbjct: 170 GGAHTCALM---SSGGVWCWGYNLSGQLGDGSTIYHITPVAVSG---LPSEVTAIAAGYA 223
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSE 430
H + G V WG +G LG G+ S P V L + V AI A G YT + S
Sbjct: 224 HTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAI-AAGGRYTCALTSS 282
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G V+ +G +S LG + N TP V L V I+ A
Sbjct: 283 -GGVWCWGRNDSGQLGDGSF--------TNRSTPGAVGGLP---SGVTAIAAG-----GA 325
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT ALT SG ++ +G D GQLG + T+R P V
Sbjct: 326 HTCALTSSGGVWCWGGNDSGQLGD---GSYTDRSTPGAV 361
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 18/256 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+ S G V+ +G N+ GQLG G+ + P + L G+ I AAG T
Sbjct: 526 AGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMAI--AAGNYHTC 583
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ + V+ +G +S G+ G T ++P V L + V A GN+ T L+ G
Sbjct: 584 ALTGSDGVWCWGTNSDGQLGDGT--TTNRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSG 640
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAV 328
V+ + + +LG T N P G + +P V IAAG + AL V
Sbjct: 641 GVWCWGYNLSGQLGDGTTTNRSTP----GAVSGLPSGVTAIAAGDEHTCALTGS---GGV 693
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ T+ P + L +AAG +H + G V WG
Sbjct: 694 WCWGDNYYGQLGDGTTTNRSTPGAVSG---LPSGVTAIAAGVYHTCALTGSGGVMCWGNN 750
Query: 389 RYGCLGHGNEECESVP 404
G LG G + P
Sbjct: 751 GDGQLGDGRPLYRTTP 766
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+TS G V+ +G N SGQLG GTT P + L G+ I AAG T
Sbjct: 628 AGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGDEHTC 685
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+ +G + +G+ G T ++P V L + V A G + T L+ G
Sbjct: 686 ALTGSGGVWCWGDNYYGQLGDGT--TTNRSTPGAVSGLPS-GVTAIAAGVYHTCALTGSG 742
Query: 271 RVYTFSWGN--DARLG-----HHTEPNDV 292
V WGN D +LG + T P DV
Sbjct: 743 GV--MCWGNNGDGQLGDGRPLYRTTPVDV 769
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 14/310 (4%)
Query: 116 AERQDLKQKCGGSWKLVLRFLLAGEACCRRENS---QAIAGPGHSIAVTSKGVVYSFGSN 172
A +L +C G+ LV++ L+ +E+S Q AG H++ +++ G +Y+ GSN
Sbjct: 7 ATHHELCIECPGNLDLVIKPTLSK----WKESSHIQQISAGEFHTLYLSNNGHLYTCGSN 62
Query: 173 SSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 231
GQLG T + P + + +G + A G +M + + GQ +++G DS G+
Sbjct: 63 EVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGS 122
Query: 232 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 291
+ G+ P+++++L V+Q A G++ T VL+ G +Y + + + G N
Sbjct: 123 NL-GSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNK 181
Query: 292 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 351
L ++ IP+ IA G + AL+ SG AV+ G G+LG R +P
Sbjct: 182 ETTPQALSSILGIPIALIACGSNHTFALS--QSG-AVFGWGKNSHGQLGLQDRESRCYPT 238
Query: 352 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
++ L N++ ++ G A + DG V T G G YG GHGN + E VP+ V L
Sbjct: 239 HLK--TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELM 296
Query: 412 DVKAIHVATG 421
VA G
Sbjct: 297 GSTVTQVACG 306
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 15/251 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGA 206
S G HS+A+ G +S+GS+S GQLG + + +P+ I++L +IQ A G+
Sbjct: 91 STIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGS 150
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T+++++ G +YA+G +S+G+ G + K T+PQ + S+ I + A G+ T L
Sbjct: 151 YHTVVLTNNGDLYAWGANSYGQCGLGNRSNK-ETTPQALSSILGIPIALIACGSNHTFAL 209
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
S+ G V F WG ++ +LG + P L TL N+ V I+ G + L
Sbjct: 210 SQSGAV--FGWGKNSHGQLGLQDRESRCYPTH-LKTLRNVKVCHISCGEDFTAFLTLDG- 265
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVC 383
V++ G G G+ GHG+ DE PR + +L+ VA G H VG+ R+
Sbjct: 266 --GVFTCGAGEYGQTGHGNTKDELVPRKV--MELMGSTVTQVACGRRHMLCRVGE--RIL 319
Query: 384 TWGWGRYGCLG 394
G+G G LG
Sbjct: 320 ACGYGARGQLG 330
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 150/332 (45%), Gaps = 31/332 (9%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLV 245
+P + + I Q +AG T+ +S+ G +Y G + G+ G Q TSP LV
Sbjct: 25 KPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQL--GRQTNSADGTSPVLV 82
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 303
++ K + A G + L G+ FSWG+D+ +LG + + + ++ TL
Sbjct: 83 DTFKGCTLSTIACGLQHSMALDEWGQ--PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLAT 140
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQ 362
V+Q+A G + + L + +Y+ G G+ G G+R++ E P+ + +L +
Sbjct: 141 KNVIQVACGSYHTVVLT---NNGDLYAWGANSYGQCGLGNRSNKETTPQALSS--ILGIP 195
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
++A G+ H + Q G V WG +G LG + E P ++ L +VK H++ G+
Sbjct: 196 IALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGE 255
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T ++ DG V++ G GE GH D L P+ V L + V Q++
Sbjct: 256 DFTAFLTLDGGVFTCGAGEYGQTGHGNTKDE--------LVPRKVMEL--MGSTVTQVAC 305
Query: 483 TNSIYWNAHTFALTESG-KLYAFGAGDKGQLG 513
L G ++ A G G +GQLG
Sbjct: 306 -------GRRHMLCRVGERILACGYGARGQLG 330
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLN 360
E+ + QI+AG + L L+ + +Y+ G G+LG + + D P L++ F+
Sbjct: 33 ESSHIQQISAGEFHTLYLS---NNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCT 89
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVA 419
L +A G H+ + + G+ +WG G LG + PK+++ L I VA
Sbjct: 90 LS--TIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVA 147
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G Y T V++ +GD+Y++G G GNR TPQ ++S+ + ++
Sbjct: 148 CGSYHTVVLTNNGDLYAWGANSYGQCG-------LGNRSNKETTPQALSSILGIPIALIA 200
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
+ HTFAL++SG ++ +G GQLG++
Sbjct: 201 CG-------SNHTFALSQSGAVFGWGKNSHGQLGLQ 229
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 28/281 (9%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
LV P L + ++ + Q + G F T LS G +YT +LG T D L
Sbjct: 22 LVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVL 81
Query: 298 LGTLENIPVVQIAAGYCYLLALA--CQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLI 353
+ T + + IA G + +AL QP +S G G+LG GS +K P++I
Sbjct: 82 VDTFKGCTLSTIACGLQHSMALDEWGQP-----FSWGSDSMGQLGSNLGSHAQDK-PKII 135
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALND 412
+ N+ + VA G++H V+ +G + WG YG G GN E+ P+ + ++
Sbjct: 136 KTLATKNV--IQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILG 193
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ +A G TF +S+ G V+ +G LG + D + + P + +L+
Sbjct: 194 IPIALIACGSNHTFALSQSGAVFGWGKNSHGQLG---LQDRESRCY-----PTHLKTLRN 245
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +V IS T LT G ++ GAG+ GQ G
Sbjct: 246 V--KVCHISCGEDF-----TAFLTLDGGVFTCGAGEYGQTG 279
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 31/373 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS+A+ S G +Y++G NSSGQLG+ + P + + G+ Q +AGA
Sbjct: 52 TQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGAD 111
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTA 264
++ + G YA+G+++ G G V P LV + + + Q G F +
Sbjct: 112 HSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSV--PLLVSAGAVPSGVTISQVMAGGFHSL 169
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAGYCYLLALA 320
+ G +Y++ + +LG T PL + +P Q++AG + LA+
Sbjct: 170 AVGSNGDIYSWGYNRSGQLGDGTTL--ASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIG 227
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
Y+ G GG+LG GS + P L+ ++ V+AG H+ VG DG
Sbjct: 228 SNGK---TYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQ--VSAGDLHSLAVGSDG 282
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+ WG G LG+ P +V + + V+ G + + DG+ Y++G
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLN 342
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
+ LG+N I P +VT+ V ++ H+
Sbjct: 343 VNGQLGNNTITTST--------VPVMVTAPDGVTFTRIEAG-------GLHSLTAASDEN 387
Query: 501 LYAFGAGDKGQLG 513
Y +GA GQLG
Sbjct: 388 TYTWGANSFGQLG 400
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 15/266 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS---LQGIRIIQAAA 204
SQ +AG HS+AV S G +YS+G N SGQLG GTT P + + G+ Q +A
Sbjct: 159 SQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ I G+ YA+G+ G+ G+ +P LV + + Q + G+ +
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQ--LGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSL 276
Query: 265 VLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ +G+ Y +WGN+ +LG+ T + + P L+ + + V Q++AG + LA+
Sbjct: 277 AVGSDGKAY--AWGNNDSGQLGNATTTSSLAP-VLVSPMGGLAVTQVSAGADHSLAIGAD 333
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ Y+ G + G+LG+ + T P ++ + + AG H+ D
Sbjct: 334 GN---AYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRI--EAGGLHSLTAASDENT 388
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQ 408
TWG +G LG+G + VP +
Sbjct: 389 YTWGANSFGQLGNGTSDGSLVPVAIS 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 139/333 (41%), Gaps = 27/333 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L G+ Q +AG ++ + G +YA+G +S G + G + P LV + +
Sbjct: 46 LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSG--QLGNNSILNSSVPVLVSTPDGVTF 103
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQI 309
Q + G + + +G Y + D RLG+ T PLL + +P + Q+
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTG--SSVPLLVSAGAVPSGVTISQV 161
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAA 368
AG + LA+ +YS G G+LG G+ P + + + V+A
Sbjct: 162 MAGGFHSLAVGSNGD---IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G H+ +G +G+ WG R G LG G+ P +V A V V+ GD + V
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAV 278
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
DG Y++G +S LG+ + L P LV+ + + V Q+S
Sbjct: 279 GSDGKAYAWGNNDSGQLGNATT--------TSSLAPVLVSPMGGL--AVTQVSAGAD--- 325
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
H+ A+ G YA+G GQLG + T
Sbjct: 326 --HSLAIGADGNAYAWGLNVNGQLGNNTITTST 356
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS---LQGIRIIQAAA 204
+Q AG HS+AV S G Y++G N+ G+LG+GT+ P + + G+ I Q A
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMA 163
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIGN 260
G ++ + G +Y++G + G+ GT L +S L S + Q + G+
Sbjct: 164 GGFHSLAVGSNGDIYSWGYNRSGQLG---DGTTLASSVPLKVSAGAVPAGVTFSQVSAGD 220
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
+ + G+ Y + +LG + P L+ + Q++AG + LA+
Sbjct: 221 RHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAP-ALVSAPAGVSFTQVSAGDLHSLAVG 279
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
Y+ G G+LG+ + T P L+ L + V +AGA H+ +G DG
Sbjct: 280 SDGK---AYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQV--SAGADHSLAIGADG 334
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
WG G LG+ +VP +V A + V + G + + D + Y++G
Sbjct: 335 NAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGAN 394
Query: 441 ESASLGHNAIADGQ 454
LG N +DG
Sbjct: 395 SFGQLG-NGTSDGS 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 20/219 (9%)
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G L + Q++AG + LA+ + +Y+ G G+LG+ S + P L+
Sbjct: 44 GVLPGVVFTQVSAGINHSLAMGSDGN---IYAWGYNSSGQLGNNSILNSSVPVLVSTPDG 100
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA---LNDVKA 415
+ V +AGA H+ VG DG WG G LG+G SVP +V A + V
Sbjct: 101 VTFTQV--SAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTI 158
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
V G + + V +GD+YS+G S LG G A+ + ++
Sbjct: 159 SQVMAGGFHSLAVGSNGDIYSWGYNRSGQLG-------DGTTLASSVPLKVSAGAVPAGV 211
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
Q+S + H+ A+ +GK YA+G GQLGI
Sbjct: 212 TFSQVSAGDR-----HSLAIGSNGKTYAWGEARGGQLGI 245
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 174/399 (43%), Gaps = 41/399 (10%)
Query: 135 FLLAGEACCR---RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 191
+L G C R + AG HS+ V G ++G N GQLG GT+ + + P P+
Sbjct: 428 MILEGGTPCAPSPRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPV 487
Query: 192 RSLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 250
+ +QG+ A +A A T+ ++ G V+ +G + G+ V ++ +P + L
Sbjct: 488 Q-VQGLTGATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAP--LPGLTG 544
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 310
+ + A G + + L ++G V+ + N +LG T + E P+ G + V +A
Sbjct: 545 VTAL--ASGTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTD---VTALA 599
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 370
A + LAL + V++ G G+LG G+ P + ++ +AAG
Sbjct: 600 ASTYHSLALKQDGT---VWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVS----AIAAGL 652
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + QDG V WG G LG+G VP VQ L V AI A G Y + + +
Sbjct: 653 VHSLALKQDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGLTGVSAI--AAGSYHSLALKQ 710
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
DG +S+G + LG+ I LTP V L V +A
Sbjct: 711 DGTAWSWGRNGTGQLGNETI--------TGSLTPVQVQGLTAVTALAGG---------DA 753
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+ AL G ++ +G +G+LG +R P RV
Sbjct: 754 HSMALLRDGTVWTWGYNAEGELGD---GTTLDRTAPVRV 789
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 16/255 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ G V+++G N+ GQLG GTT P+ L + + AA ++ +
Sbjct: 554 HSLALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTDVTAL--AASTYHSLALKQD 611
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+ +G +S G+ G ++L +P V L + + A G + L ++G V+ +
Sbjct: 612 GTVWTWGYNSSGQLGDGTTASRL--TPAQVPGLTGVSAIAA--GLVHSLALKQDGTVWAW 667
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
D +LG+ N P + G V IAAG + LAL + G A +S G
Sbjct: 668 GRNTDGQLGNGAAVNSPVPVQVQGLTG---VSAIAAGSYHSLAL--KQDGTA-WSWGRNG 721
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG+ + T P ++ + +A G H+ + +DG V TWG+ G LG
Sbjct: 722 TGQLGNETITGSLTPVQVQGLTAVT----ALAGGDAHSMALLRDGTVWTWGYNAEGELGD 777
Query: 396 GNEECESVPKVVQAL 410
G + P VQ L
Sbjct: 778 GTTLDRTAPVRVQGL 792
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ G V+++G NSSGQLG GTT P + L G+ I AAG ++ +
Sbjct: 604 HSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVSAI--AAGLVHSLALKQD 661
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G+++ G+ G V SP V+ V A G++ + L ++G +++
Sbjct: 662 GTVWAWGRNTDGQLGNGAA----VNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSW 717
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+LG+ T + P + G V +A G + +AL + V++ G
Sbjct: 718 GRNGTGQLGNETITGSLTPVQVQGLTA---VTALAGGDAHSMALLRDGT---VWTWGYNA 771
Query: 336 GGKLGHGSRTDEKHPRLIEQFQL 358
G+LG G+ D P ++ L
Sbjct: 772 EGELGDGTTLDRTAPVRVQGLVL 794
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 168/363 (46%), Gaps = 37/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G N +GQLG+G + P+ L I ++ +AG ++
Sbjct: 303 AGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGL--IDVVALSAGYSHSLA 360
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G T SP V L ++ + A G+ + L +G
Sbjct: 361 LRTDGTVWAWGYNSLGQLGDGT--TIPRPSPVQVPDLTDVVALSA--GDSHSLALRTDGT 416
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V + +LG T + + P + + VV ++AG + LAL + V++
Sbjct: 417 VRAWGVNYSGQLGDGTTTHRLSP---VQVPDLTDVVALSAGGNHTLALRTNGT---VWAW 470
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T PRL Q+L L VV ++AG +H+ V DG V WG
Sbjct: 471 GSNSDGQLGDGTTT----PRL-SPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSD 525
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G P V L DV A+ + GD + + DG V+++G S+ LG
Sbjct: 526 GQLGDGTTTHRLTPVQVPGLTDVVAL--SAGDSHSLALRTDGTVWAWGSNSSSQLGDGTT 583
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
R + V P L VV +S AH+ AL G ++A+G+ G
Sbjct: 584 TP----RGSPVQVPGLT--------DVVALSAG-----GAHSLALRTDGTVWAWGSNYYG 626
Query: 511 QLG 513
QLG
Sbjct: 627 QLG 629
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 37/363 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++GSNSSGQLG GTT R P++ ++ +AG +
Sbjct: 3 AGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTP--RGSPVQVPGLTDVVALSAGNHHCLA 60
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G +L S V L ++ + A G+ +T L +G
Sbjct: 61 LRTDGTVWAWGSNSSGQLGDGTTTPRL--SSVQVPGLTDVVALSA--GSSYTLALRTDGT 116
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T + P + G + VV +++G + LAL + V++
Sbjct: 117 VWAWGYNFYGQLGDGTTTPRLAPVQVPGLTD---VVALSSGIYHSLALRTDGT---VWAW 170
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T R + Q+ L VV ++AG +H+ V DG V WG
Sbjct: 171 GDNASGQLGDGTAT-----RRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSNFS 225
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G P V L +V A+ + D T + DG V+++G LG
Sbjct: 226 GQLGDGTATPRLSPVQVSGLTNVVAL--SADDSYTLALRTDGTVWAWGYNSYGQLG---- 279
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
DG TP+L S QV ++L+ +H+ AL G ++A+G G
Sbjct: 280 -DG-------TTTPRL--SPVQVPGLTNVVALSAGY---SHSLALRTDGTVWAWGYNYNG 326
Query: 511 QLG 513
QLG
Sbjct: 327 QLG 329
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 167/364 (45%), Gaps = 39/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G NS GQLG GTT RP P++ ++ +AG ++
Sbjct: 353 AGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIP--RPSPVQVPDLTDVVALSAGDSHSLA 410
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V A+G + G+ G +L SP V L ++ + A G T L G
Sbjct: 411 LRTDGTVRAWGVNYSGQLGDGTTTHRL--SPVQVPDLTDVVALSA--GGNHTLALRTNGT 466
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +D +LG T + P +LG L N VV ++AGY + LA+ + V++
Sbjct: 467 VWAWGSNSDGQLGDGTTTPRLSPVQMLG-LTN--VVALSAGYYHSLAVHTDGT---VWAW 520
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T P Q+ L VV ++AG H+ + DG V WG
Sbjct: 521 GSNSDGQLGDGTTTHRLTP-----VQVPGLTDVVALSAGDSHSLALRTDGTVWAWGSNSS 575
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG G P V L DV A+ + G + + DG V+++G LG
Sbjct: 576 SQLGDGTTTPRGSPVQVPGLTDVVAL--SAGGAHSLALRTDGTVWAWGSNYYGQLG---- 629
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDK 509
DG TP+L L V ++ T+++Y A H+ AL G A+G
Sbjct: 630 -DG-------TTTPRLFPVL------VSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYG 675
Query: 510 GQLG 513
GQLG
Sbjct: 676 GQLG 679
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 20/301 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V ++G N SGQLG GTT R P++ ++ +AG T+
Sbjct: 403 AGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTH--RLSPVQVPDLTDVVALSAGGNHTLA 460
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S G+ G +L SP + L N+ + A G + + + +G
Sbjct: 461 LRTNGTVWAWGSNSDGQLGDGTTTPRL--SPVQMLGLTNVVALSA--GYYHSLAVHTDGT 516
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + +D +LG T + + P + G + VV ++AG + LAL + V++
Sbjct: 517 VWAWGSNSDGQLGDGTTTHRLTPVQVPGLTD---VVALSAGDSHSLALRTDGT---VWAW 570
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G +LG G+ T P Q+ L VV ++AG H+ + DG V WG Y
Sbjct: 571 GSNSSSQLGDGTTTPRGSP-----VQVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYY 625
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G P +V L ++ G + + DG ++G LG
Sbjct: 626 GQLGDGTTTPRLFPVLVSNLTGTSNLYAGAGH--SLALRTDGTGRAWGNNYGGQLGDGTS 683
Query: 451 A 451
A
Sbjct: 684 A 684
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 48/383 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +++A+ + G V+++G N GQLG GTT P + L ++ ++G ++
Sbjct: 103 AGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGL--TDVVALSSGIYHSLA 160
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G ++ G+ G +L SP V L ++ + A G + + + +G
Sbjct: 161 LRTDGTVWAWGDNASGQLGDGTATRRL--SPVQVPGLTDVVALSA--GGYHSLAVRTDGT 216
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T + P + G L N VV ++A Y LAL + V+
Sbjct: 217 VW--AWGSNFSGQLGDGTATPRLSPVQVSG-LTN--VVALSADDSYTLALRTDGT---VW 268
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ T PRL Q+ L VV ++AG H+ + DG V WG+
Sbjct: 269 AWGYNSYGQLGDGTTT----PRL-SPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYN 323
Query: 389 RYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG+G + S+P V L DV A+ + G + + DG V+++G LG
Sbjct: 324 YNGQLGNGIPTQRSPSIP--VFGLIDVVAL--SAGYSHSLALRTDGTVWAWGYNSLGQLG 379
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
R + V P L VV +S +S H+ AL G + A+G
Sbjct: 380 DGTTIP----RPSPVQVPDLT--------DVVALSAGDS-----HSLALRTDGTVRAWGV 422
Query: 507 GDKGQLGIELVNNQTERGNPERV 529
GQLG T R +P +V
Sbjct: 423 NYSGQLGD---GTTTHRLSPVQV 442
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 140/312 (44%), Gaps = 35/312 (11%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
AAG ++ + G V+A+G +S G+ G T SP V L ++ + A GN
Sbjct: 2 AAGYSHSLALHTDGTVWAWGSNSSGQLGDGT--TTPRGSPVQVPGLTDVVALSA--GNHH 57
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
L +G V+ + + +LG T + + G + VV ++AG Y LAL
Sbjct: 58 CLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD---VVALSAGSSYTLALRTD 114
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 381
+ V++ G G+LG G+ T PRL Q+ L VV +++G +H+ + DG
Sbjct: 115 GT---VWAWGYNFYGQLGDGTTT----PRL-APVQVPGLTDVVALSSGIYHSLALRTDGT 166
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G LG G P V L DV A+ + G Y + V DG V+++G
Sbjct: 167 VWAWGDNASGQLGDGTATRRLSPVQVPGLTDVVAL--SAGGYHSLAVRTDGTVWAWGSNF 224
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
S LG DG L+P V+ L VV +S +S +T AL G +
Sbjct: 225 SGQLG-----DGTATPR---LSPVQVSGLTN----VVALSADDS-----YTLALRTDGTV 267
Query: 502 YAFGAGDKGQLG 513
+A+G GQLG
Sbjct: 268 WAWGYNSYGQLG 279
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV + G V+++GSNS GQLG GTT P + L ++ +AG ++
Sbjct: 503 AGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL--TDVVALSAGDSHSLA 560
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S ++ G T SP V L ++ + A G + L +G
Sbjct: 561 LRTDGTVWAWGSNS--SSQLGDGTTTPRGSPVQVPGLTDVVALSA--GGAHSLALRTDGT 616
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T + P L+ L + AG+ LAL +G A
Sbjct: 617 VW--AWGSNYYGQLGDGTTTPRLFP-VLVSNLTGTSNLYAGAGHS--LALRTDGTGRA-- 669
Query: 330 SVGCGLGGKLGHGSRTDEKHP 350
G GG+LG G+ HP
Sbjct: 670 -WGNNYGGQLGDGTSAFFLHP 689
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 19/148 (12%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+AAG H+ + DG V WG G LG G P V L DV A+ + G++
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTDVVAL--SAGNHHC 58
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ DG V+++G S LG R ++V P L VV +S +S
Sbjct: 59 LALRTDGTVWAWGSNSSGQLGDGTTTP----RLSSVQVPGLT--------DVVALSAGSS 106
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
+T AL G ++A+G GQLG
Sbjct: 107 -----YTLALRTDGTVWAWGYNFYGQLG 129
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 56/349 (16%)
Query: 184 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
+ + P+ ++S + + G +L++ GQ+Y++G++S G +GV V P+
Sbjct: 286 DSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPK 343
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLG 299
L++ V A G F T ++ G +Y +WG N LG + + +P +LG
Sbjct: 344 LIDEFNGSTVELADCGEFHTCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILG 401
Query: 300 TLENIPVVQIAAGYCYLLALACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
+E I Y+ A++C P S +++ G G G LGHG R PR
Sbjct: 402 QMEGI----------YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPRE 451
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPK 405
+E L + + A G WH+A V G++ TWG G G LGHG+ EC +P
Sbjct: 452 VE--ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 509
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V L+ VA G T +S G VY+ G + + H V P
Sbjct: 510 CVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPS--------------HDIVRAPS 555
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 513
+ E + S + H A L ++Y +G G GQLG
Sbjct: 556 CI-------EGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLG 597
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 30/292 (10%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQAAAGA 206
A G H+ AVT+ G +Y++G +++G LG G+ W+P R + ++GI + + G
Sbjct: 356 ADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP 415
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
T ++ G+++ FG +FG +G + + + P+ VE+L ++AA G + +A +
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRTIKAACGVWHSAAV 473
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYL 316
+ G+++T+ G+D RLGH D+E + + L+ Q+A G
Sbjct: 474 VSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDTTSFQQVACGQSIT 529
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+AL+ SG VY++G S + P IE L VA G H AV+
Sbjct: 530 VALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFVQEVACGFHHIAVL 579
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
V TWG G G LGHG+ E +P +V+AL + V G +YT +
Sbjct: 580 NSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)
Query: 236 TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 290
+ L+T L + LK+ + A + G + +++++G++Y SWG ++ RLGH
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 336
Query: 291 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
PHP L N V++A + + + G G LG GS P
Sbjct: 337 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 396
Query: 351 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
R++ Q + + ++ ++ G WH A V +G++ T+G G +G LGHG+ ++P+ V+A
Sbjct: 397 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 454
Query: 410 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
LN + I A G + + V + G ++++G G+ LGH I L
Sbjct: 455 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI--------ECRL 506
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
P VT L + Q++ SI T AL+ SG++YA G D
Sbjct: 507 IPSCVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTAD 545
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 27/246 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
GP H+ VTS+G +++FG + G LGHG PR + +L G R I+AA G + +
Sbjct: 414 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAV 473
Query: 213 -------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+ +G+++ +G G +G +L+ P V L Q A G T
Sbjct: 474 VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVA 531
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
LS G+VY +G +D+ P + G L V ++A G+ ++ L
Sbjct: 532 LSMSGQVYA--------MGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLN--- 580
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-----VAAGAWHAAVVGQ 378
S VY+ G G G+LGHG P L++ + ++ VV A H + G
Sbjct: 581 SKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGT 640
Query: 379 DGRVCT 384
D C+
Sbjct: 641 DSTKCS 646
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 149 QAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q +A H IAV SK VY++G S+GQLGHG TE P +++L+G ++ + G+
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 626
Query: 208 RTMLI 212
T I
Sbjct: 627 YTATI 631
>gi|294935314|ref|XP_002781381.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
50983]
gi|239891962|gb|EER13176.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
50983]
Length = 359
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 164/375 (43%), Gaps = 47/375 (12%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G VY+FGS +SGQLGHG +E +P + SL IR++ A G T+ + G V+ G
Sbjct: 3 DGRVYTFGSGTSGQLGHGVLRDEPQPLLVSSLSRIRLVAVACGDRHTLFLGVTGLVFGTG 62
Query: 223 KDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+++FG + + +SP+ V+S +I + G + VL GRV F W
Sbjct: 63 RNTFG--QLACDDLRDFSSPRRIDVDSFGSI-PIDVRCGGDHSMVLLANGRVVAFGWNAF 119
Query: 281 ARLG---HH--TEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLALACQPSGMAVYS 330
+LG H T P P TL N P V ++ G+ + L LA SG VYS
Sbjct: 120 GQLGIGISHLGTSPVSAISSP---TLVNPPGPSVRFVSVSCGFAHSLLLA--DSGR-VYS 173
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGR 389
G G G+LG+ R+ P LI + V+ G H+ V+ G G V +G G
Sbjct: 174 CGMGTHGQLGNDERSHCWVPTLIPTISRCTM----VSCGGHHSLVLCGPMGEVYAFGSGS 229
Query: 390 YGCLGHGNEECE-SVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G++ + S+P KV L V A+ G ++ + + +Y FG G LG
Sbjct: 230 TGKLGRGDDMGDTSIPVKVSGQLPPVAAV-CCGGAHSLVITRDKSALYGFGMGRRGQLG- 287
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
DG H P V + + HT A ES FG
Sbjct: 288 ----DGLRRSHPLPTGP-------------VAVGVKCIAGGGYHTLAALESRGFIVFGRS 330
Query: 508 DKGQLGIELVNNQTE 522
+GQLG+ V + ++
Sbjct: 331 TRGQLGVGFVEDVSD 345
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 133/311 (42%), Gaps = 30/311 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 214
H++ + G+V+ G N+ GQL + PR I G I G +M++
Sbjct: 48 HTLFLGVTGLVFGTGRNTFGQLACDDLRDFSSPRRIDVDSFGSIPIDVRCGGDHSMVLLA 107
Query: 215 AGQVYAFGKDSFGEAEYGVQ--GT---KLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSR 268
G+V AFG ++FG+ G+ GT ++SP LV ++ V + G + +L+
Sbjct: 108 NGRVVAFGWNAFGQLGIGISHLGTSPVSAISSPTLVNPPGPSVRFVSVSCGFAHSLLLAD 167
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV----QIAAGYCYLLALACQPS 324
GRVY+ G +LG ND H + TL IP + ++ G + L L C P
Sbjct: 168 SGRVYSCGMGTHGQLG-----NDERSHCWVPTL--IPTISRCTMVSCGGHHSLVL-CGPM 219
Query: 325 GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQD-GR 381
G VY+ G G GKLG G D P + L PV V G H+ V+ +D
Sbjct: 220 G-EVYAFGSGSTGKLGRGDDMGDTSIPVKVSG----QLPPVAAVCCGGAHSLVITRDKSA 274
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ +G GR G LG G +P A+ VK I A G Y T E FG
Sbjct: 275 LYGFGMGRRGQLGDGLRRSHPLPTGPVAVG-VKCI--AGGGYHTLAALESRGFIVFGRST 331
Query: 442 SASLGHNAIAD 452
LG + D
Sbjct: 332 RGQLGVGFVED 342
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 106/263 (40%), Gaps = 31/263 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--------QGIRIIQAAAGAG 207
HS+ + + G V +FG N+ GQLG G + P S +R + + G
Sbjct: 101 HSMVLLANGRVVAFGWNAFGQLGIGISHLGTSPVSAISSPTLVNPPGPSVRFVSVSCGFA 160
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++L++D+G+VY+ G + G + G P L+ ++ +V G+ +
Sbjct: 161 HSLLLADSGRVYSCGMGTHG--QLGNDERSHCWVPTLIPTISRCTMVSCG-GHHSLVLCG 217
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G VY F G+ +LG + D P + G L PV + G + L + S
Sbjct: 218 PMGEVYAFGSGSTGKLGRGDDMGDTSIPVKVSGQLP--PVAAVCCGGAHSLVITRDKS-- 273
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGR 381
A+Y G G G+LG G R HP L PV V A G +H +
Sbjct: 274 ALYGFGMGRRGQLGDGLR--RSHP--------LPTGPVAVGVKCIAGGGYHTLAALESRG 323
Query: 382 VCTWGWGRYGCLGHGNEECESVP 404
+G G LG G E S P
Sbjct: 324 FIVFGRSTRGQLGVGFVEDVSDP 346
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 40/335 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLQGIRIIQAAAGAGRTM 210
G H+ +T+ +VYS GSN++GQLG G + + P + +L + I A GA T+
Sbjct: 124 GDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTL 183
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAV 265
+ ++ G VY++G+ FG G + + P+L+ + ++Q + G F+A+
Sbjct: 184 VCTERGDVYSWGQGIFGALGAGNLDDQFL--PKLIHISHDQLSTKSQMIQVSAGMRFSAI 241
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQP 323
L + GRVYT + +LG D E P+ +++ P V IA G +LL L Q
Sbjct: 242 LDQSGRVYTCGQNDAGQLG--IGGRDQENIPI--SIKKFPERVSMIACGQMHLLMLTKQG 297
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ VYS G G+LG ++ + P LI+ + ++ VAAG++ A++ G +
Sbjct: 298 T---VYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMR--YVAAGSFSASISYDSGDLY 352
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
WG G +G P V+ + + + V+ G++ V++DG VYS+G S
Sbjct: 353 LWGSGVFGEF--------LTPHRVKTIKGM-TVSVSIGNHFGIAVNQDGIVYSWGHNNSG 403
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
LG + TPQ++ Q+N+++V
Sbjct: 404 ELGQGDFDER--------PTPQIIN---QLNDKIV 427
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 158/355 (44%), Gaps = 39/355 (10%)
Query: 166 VYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
++S+GS+ +GQLG G ++ + P P I I + G I+ VY+ G +
Sbjct: 84 IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSN 143
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
+ G+ G K+ SP LVE+L + + A G T V + G VY++ G LG
Sbjct: 144 TNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALG 203
Query: 285 HHTEPNDVEP------HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+ P H L T ++Q++AG + L SG VY+ G G+
Sbjct: 204 AGNLDDQFLPKLIHISHDQLSTKS--QMIQVSAGMRFSAILD--QSG-RVYTCGQNDAGQ 258
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
LG G R E P I++F + ++A G H ++ + G V + G +G LG N+
Sbjct: 259 LGIGGRDQENIPISIKKFPE---RVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNK 315
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
S P ++Q ++ + +VA G ++ + + GD+Y +G G
Sbjct: 316 RNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEF------------- 362
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
LTP V ++K + V +S+ N A+ + G +Y++G + G+LG
Sbjct: 363 ---LTPHRVKTIKGM---TVSVSIGNHF-----GIAVNQDGIVYSWGHNNSGELG 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 328 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
++S G G+LG G S+ + +P + ++ N+ V+ G HAA + V + G
Sbjct: 84 IFSWGSDQAGQLGLGQSQIGKSYP--VPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMG 141
Query: 387 WGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G LG G+ + ++ P +V+AL D K I +A G T V +E GDVYS+G G +
Sbjct: 142 SNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGA 201
Query: 445 LGHNAIADGQGNRHANVLTPQLV-TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG + D P+L+ S Q++ + I ++ + ++A L +SG++Y
Sbjct: 202 LGAGNLDDQ--------FLPKLIHISHDQLSTKSQMIQVSAGMRFSA---ILDQSGRVYT 250
Query: 504 FGAGDKGQLGI 514
G D GQLGI
Sbjct: 251 CGQNDAGQLGI 261
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H + +T +G VYS G+NS GQLG P I+ + I + AAG+ +
Sbjct: 286 GQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASIS 345
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
D+G +Y +G FGE +P V+++K + V +IGN F ++++G V
Sbjct: 346 YDSGDLYLWGSGVFGE----------FLTPHRVKTIKGM-TVSVSIGNHFGIAVNQDGIV 394
Query: 273 YTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLAL 319
Y++ N LG D P P ++ L + V ++ G + +AL
Sbjct: 395 YSWGHNNSGELGQGDF--DERPTPQIINQLNDKIVTLVSCGRNFSIAL 440
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 42/381 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG H++ + S G V+++G NSSGQLG G T +P + L I + A G G ++
Sbjct: 416 VAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSV 473
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G ++A+G + G+ G+ T+ + P L +I + A G+ + L G
Sbjct: 474 AVGSDGGIWAWGDNRRGQLGIGITATREI--PVQATGLASISALAA--GDSHSLALRGNG 529
Query: 271 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+T WG++A +LG T + + G + + +AAG + LAL + V
Sbjct: 530 SVWT--WGSNAYGQLGDGTAIDRATAAQVPGLTD---ITALAAGNHHSLALRNDGT---V 581
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ T K P + + V AG H+ V +G V WG
Sbjct: 582 WVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMR----AVEAGPAHSVAVHLNGTVWVWGNN 637
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G ++P V L V A VA G Y + + DG ++++G LG+
Sbjct: 638 DFGQLGDGTVTSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNG 695
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
T + ++ QV I+L N H+ AL G ++ +GA
Sbjct: 696 --------------TSGIQSTPAQVPGLTGVIALAAG---NGHSLALRTDGTVWGWGANS 738
Query: 509 KGQLGIELVNNQTERGNPERV 529
GQLG T R P +V
Sbjct: 739 FGQLGD---GTTTPRSTPTQV 756
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 166/407 (40%), Gaps = 56/407 (13%)
Query: 137 LAG-EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 195
LAG A N +A HS+A+ S G V+++G NS+GQLG GTT E R P++ L
Sbjct: 242 LAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTE--RATPVQVLG 299
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
+ AAGA ++ + D G V+A+G +S G+ G T +P V L ++ V
Sbjct: 300 LTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT--TTARPTPVQVPGLTSVIAVA 357
Query: 256 AAIGN-------FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 308
A G+ + L +G V+ + + + G P + V +
Sbjct: 358 AGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTP---------VQVSE 408
Query: 309 IAAGYCY----LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
+ G L A+ + G V++ G G+LG G P + +
Sbjct: 409 LTGGTALVAGDLHAVVLKSDGT-VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAI----T 463
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G H+ VG DG + WG R G LG G +P L + A+ A GD
Sbjct: 464 ALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLASISAL--AAGDSH 521
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISL 482
+ + +G V+++G LG D R P L +T+L N
Sbjct: 522 SLALRGNGSVWTWGSNAYGQLGDGTAID----RATAAQVPGLTDITALAAGNH------- 570
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
H+ AL G ++ +G+ D GQLG V T R P +V
Sbjct: 571 --------HSLALRNDGTVWVWGSNDFGQLGDGTV---TSRKTPVQV 606
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 177/407 (43%), Gaps = 69/407 (16%)
Query: 135 FLLAGEACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 193
F L AC + A++ G H++A+ G V+++G N SGQLG+GT + R P++
Sbjct: 136 FTLTANACP----APAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATD--RATPVQV 189
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
++ AA ++ + G V+A+G + +G+ G + + T+P V L +
Sbjct: 190 PGLTSVMAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQR--TTPVQVLGLAGVTA 247
Query: 254 VQAAIGNFFTAVLS-------REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 304
+ AA GN T +S +G V+ +WG+++ +LG T P +LG
Sbjct: 248 L-AAGGNGTTVAISAHSLALRSDGTVW--AWGDNSAGQLGDGTTTERATPVQVLGLTS-- 302
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V +AAG + LAL + V++ G G+LG G+ T P Q+ L V
Sbjct: 303 -VTALAAGAFHSLALRDDGT---VWAWGNNSSGQLGDGTTTARPTP-----VQVPGLTSV 353
Query: 365 V-VAAGAW---------HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+ VAAG H+ + DG V WG+ G G + P V L
Sbjct: 354 IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGT 413
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
A+ GD V+ DG V+++G S LG +TP V
Sbjct: 414 AL--VAGDLHAVVLKSDGTVWAWGDNSSGQLGEG-------------VTP--------VR 450
Query: 475 ERVVQIS----LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
+ +Q+S +T + H+ A+ G ++A+G +GQLGI +
Sbjct: 451 AKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGIT 497
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 159/372 (42%), Gaps = 46/372 (12%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLIS-- 213
HS+A+ S G V+++G N GQLG GT + P + L G+ + AA G G T+ IS
Sbjct: 204 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTAL-AAGGNGTTVAISAH 262
Query: 214 -----DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
G V+A+G +S G+ G T +P V L ++ + A G F + L
Sbjct: 263 SLALRSDGTVWAWGDNSAGQLGDGT--TTERATPVQVLGLTSVTALAA--GAFHSLALRD 318
Query: 269 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL-----LALAC 321
+G V+ +WGN++ +LG T P + G L ++ V G L +LA
Sbjct: 319 DGTVW--AWGNNSSGQLGDGTTTARPTPVQVPG-LTSVIAVAAGGGDDSLGMRGDHSLAL 375
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+ G V++ G L + G G P + + + AG HA V+ DG
Sbjct: 376 KSDGT-VWAWGYNLSRQFGDGMPATRTTPVQVSELT----GGTALVAGDLHAVVLKSDGT 430
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
V WG G LG G + P V L + A+ ATGD + V DG ++++G
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITAL--ATGDGHSVAVGSDGGIWAWGDNR 488
Query: 442 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 501
LG A + P T L ++ ++H+ AL +G +
Sbjct: 489 RGQLGIGITATRE--------IPVQATGLASISALAAG---------DSHSLALRGNGSV 531
Query: 502 YAFGAGDKGQLG 513
+ +G+ GQLG
Sbjct: 532 WTWGSNAYGQLG 543
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 157/364 (43%), Gaps = 39/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+++GSN+ GQLG GT + + L I + AAG ++
Sbjct: 517 AGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDITAL--AAGNHHSLA 574
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G V+ +G + FG+ G ++ +P V L + V+A G + + G
Sbjct: 575 LRNDGTVWVWGSNDFGQLGDGTVTSR--KTPVQVSGLSAMRAVEA--GPAHSVAVHLNGT 630
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ WGN+ +LG T + P + G V +A G + LAL + ++
Sbjct: 631 VWV--WGNNDFGQLGDGTVTSRAMPVQVSGLTG---VTAVAVGVYHSLALRNDGT---LW 682
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+G+ + P + + + +AAG H+ + DG V WG
Sbjct: 683 AWGYNNVGQLGNGTSGIQSTPAQVPGLTGV----IALAAGNGHSLALRTDGTVWGWGANS 738
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+G LG G S P V L +V A++ G + T + + V+ +G + LG
Sbjct: 739 FGQLGDGTTTPRSTPTQVPGLTNVIALNA--GAFYTVALRSERSVWEWGSKSAGQLGDGT 796
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+ TP V+ L V NAH AL ++A+G +
Sbjct: 797 VT--------QKTTPVQVSGLTDVTALAAG---------NAHALALRTDRTVWAWGGNQR 839
Query: 510 GQLG 513
GQ+G
Sbjct: 840 GQIG 843
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 167/420 (39%), Gaps = 92/420 (21%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG---- 207
AG HS+A+ G V+++G+NSSGQLG GTT RP P++ +I AAG G
Sbjct: 308 AGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGGDDSL 365
Query: 208 -----RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
++ + G V+A+G + + G+ T+ T+P V L + A G+
Sbjct: 366 GMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATR--TTPVQVSELTGGTALVA--GDLH 421
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG--------------------- 299
VL +G V+ +WG+++ +LG P +P + G
Sbjct: 422 AVVLKSDGTVW--AWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDG 479
Query: 300 ------------------TLENIPV--------VQIAAGYCYLLALACQPSGMAVYSVGC 333
IPV +AAG + LAL S V++ G
Sbjct: 480 GIWAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGS---VWTWGS 536
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG G+ D + + +AAG H+ + DG V WG +G L
Sbjct: 537 NAYGQLGDGTAIDRATAAQVPGLTDI----TALAAGNHHSLALRNDGTVWVWGSNDFGQL 592
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G G P V L+ ++A+ G + V +G V+ +G + LG DG
Sbjct: 593 GDGTVTSRKTPVQVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLG-----DG 645
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
A P V+ L V V +Y H+ AL G L+A+G + GQLG
Sbjct: 646 TVTSRA---MPVQVSGLTGVTAVAV------GVY---HSLALRNDGTLWAWGYNNVGQLG 693
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AGP HS+AV G V+ +G+N GQLG GT P + L G+ + A G ++
Sbjct: 617 AGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYHSLA 674
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ + G ++A+G ++ G+ G G + ++P V L + + A GN + L +G
Sbjct: 675 LRNDGTLWAWGYNNVGQLGNGTSGIQ--STPAQVPGLTGVIALAA--GNGHSLALRTDGT 730
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG T P + G L N V+ + AG Y +AL + S V+
Sbjct: 731 VWGWGANSFGQLGDGTTTPRSTPTQVPG-LTN--VIALNAGAFYTVALRSERS---VWEW 784
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T + P Q+ L V +AAG HA + D V WG +
Sbjct: 785 GSKSAGQLGDGTVTQKTTP-----VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQR 839
Query: 391 GCLGHGNEECESVP 404
G +G G P
Sbjct: 840 GQIGDGTASIMPAP 853
>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
magnipapillata]
Length = 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 153/344 (44%), Gaps = 34/344 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH---GTTEEEWRPRPIRSLQGIRIIQAAAG 205
Q G H+I V+ G VYS+G N G LG GT EE+ PR + QGIR++ A+AG
Sbjct: 76 QVTCGGMHTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAG 135
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-----SLKNIFVVQAAIGN 260
+ ++D G+V+A+G + G+ + ++++ + V+ GN
Sbjct: 136 DSHSAALTDDGRVFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGN 195
Query: 261 FFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVE----PHPLLGTLENIPVVQI 309
T +L+ EG +YT G +LG H +E P + +
Sbjct: 196 DHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIF 255
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---VVV 366
A +C A VY+ G G+LG G+ + +P +I+ + + +
Sbjct: 256 AGSFC---TFALSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQI 312
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTT 425
G H+ V +G+ + G YG LG G + E S+PK + +L + +A G+ +
Sbjct: 313 HGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIACGEAVS 372
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
F V++ G +YS+G G S LG + D + ++ P LV S
Sbjct: 373 FAVTDKGHLYSWGLGTSLQLG---VGDDE-----DIFDPSLVQS 408
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 54/385 (14%)
Query: 160 VTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
V G + + G GQLG G E RP I+ ++G+ IQ G T+ +S+ G+V
Sbjct: 34 VQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGEV 93
Query: 219 YAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
Y++G + G G G + + P+ V + I VV A+ G+ +A L+ +GRV F
Sbjct: 94 YSWGCNDDGALGRPTEGTDGEEFI--PRKVLLPQGIRVVYASAGDSHSAALTDDGRV--F 149
Query: 276 SWG-----------NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+WG A +G E + P G + P V++ +G + + L +
Sbjct: 150 AWGAYRDASGQIGLTAASIGKKNEVIKIYPK---GDQIDDPAVKVVSGNDHTVILTSEG- 205
Query: 325 GMAVYSVGCGLGGKLGH-----GSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAV 375
+Y+ G G G+LG G R + +I Q++ + + AG++
Sbjct: 206 --LIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFA 263
Query: 376 VGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA-----IHVATGDYTTFVVS 429
+ +D V WG YG LG G E P+V+Q+L++++ + + G + + V
Sbjct: 264 LSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVAD 323
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+G YS G E L G G P+ + SL++ E VV+I+ ++
Sbjct: 324 GNGKTYSIGRSEYGRL-------GLGKDAKETSLPKKIDSLEK--ENVVKIACGEAV--- 371
Query: 490 AHTFALTESGKLYAFGAGDKGQLGI 514
+FA+T+ G LY++G G QLG+
Sbjct: 372 --SFAVTDKGHLYSWGLGTSLQLGV 394
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ + G + T G+ +LG + + ++ +E + +Q+ G + + ++
Sbjct: 33 LVQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGE 92
Query: 325 GMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
VYS GC G LG G+ +E PR + Q ++ V +AG H+A + DGR
Sbjct: 93 ---VYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQ--GIRVVYASAGDSHSAALTDDGR 147
Query: 382 VCTWGWGR---------YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
V WG R +G NE + PK Q D A+ V +G+ T +++ +G
Sbjct: 148 VFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQI--DDPAVKVVSGNDHTVILTSEG 205
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHAN-----VLTPQLVTSLKQVNERVVQISLTNSIY 487
+Y+ G GE LG I + G+R +L+PQ+V R + + I+
Sbjct: 206 LIYTSGTGEQGQLGR--IKECFGHRGGRRGLEIILSPQVV--------RFRKKQFFSDIF 255
Query: 488 WNAH-TFALT-ESGKLYAFGAGDKGQLG 513
+ TFAL+ ++ +YA+G + GQLG
Sbjct: 256 AGSFCTFALSRDTNDVYAWGLNNYGQLG 283
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-----------EEEWRPRPIRSLQGI 197
+ ++G H++ +TS+G++Y+ G+ GQLG E P+ +R +
Sbjct: 190 KVVSGNDHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQVVRFRKKQ 249
Query: 198 RIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF---- 252
AG+ T +S D VYA+G +++G+ G T+ +P++++SL I
Sbjct: 250 FFSDIFAGSFCTFALSRDTNDVYAWGLNNYGQLGSGT--TENFFNPEVIQSLSEIREHAN 307
Query: 253 -VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
+Q G + V G+ Y+ RLG + + + +LE VV+IA
Sbjct: 308 GYLQIHGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKENVVKIAC 367
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAG 369
G A+ + +YS G G +LG G D P L++ L Q V V+AG
Sbjct: 368 GEAVSFAVTDKGH---LYSWGLGTSLQLGVGDDEDIFDPSLVQSNNLTLAQDEVLAVSAG 424
Query: 370 AWHAAVV 376
H A++
Sbjct: 425 GQHTAIL 431
>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
Length = 1867
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 155/328 (47%), Gaps = 38/328 (11%)
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
I A G L++ G+V+ +G+++ G +G+Q V+ P+LVE L + A G
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVD--VSRPKLVEFLALTNIDFVACG 1141
Query: 260 NFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ T +S G ++T WG N LGH ++ + P + G +E + V+ +A G +
Sbjct: 1142 EYHTCAVSTSGDLFT--WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG-TW 1198
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA- 374
ALA + +++ G G G LGHG R +P+ ++ L L+ + VA G WH
Sbjct: 1199 HSALAT--ANGKLFTFGDGAFGVLGHGDRESVSYPKEVKM--LSGLKTMKVACGVWHTVA 1254
Query: 375 ---VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
V+ Q G ++ TWG G LGHGN+E +P V +L D +A G T
Sbjct: 1255 IVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLT 1314
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
++ G V++ G LG ++ +DG+ P LV + V E V +IS +
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLG-SSNSDGK--------LPCLVQD-RLVGEFVEEISCGDH 1364
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
H LT +++ +G G G+LG
Sbjct: 1365 -----HVAVLTSRSEVFTWGKGSNGRLG 1387
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 149/282 (52%), Gaps = 23/282 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRT 209
G H+ AV++ G ++++G ++ G LGHG+ W P+ + ++G++++ A G +
Sbjct: 1141 GEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHS 1200
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA----V 265
L + G+++ FG +FG +G + + V+ P+ V+ L + ++ A G + T V
Sbjct: 1201 ALATANGKLFTFGDGAFGVLGHGDRES--VSYPKEVKMLSGLKTMKVACGVWHTVAIVEV 1258
Query: 266 LSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+++ G +++T+ G+ RLGH + + P + +L + QIA G+ +AL
Sbjct: 1259 MNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLIDYNFQQIACGHTLTVAL 1317
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG V+++G G+LG S +D K P L+ Q +L+ ++ G H AV+
Sbjct: 1318 TT--SGH-VFTMGGTSHGQLG-SSNSDGKLPCLV-QDRLVGEFVEEISCGDHHVAVLTSR 1372
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVA 419
V TWG G G LGHG++E P +V+AL + VK+I A
Sbjct: 1373 SEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 37/351 (10%)
Query: 139 GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR 198
G CR G H VT +G V+++G + G+LGHG + RP+ + L
Sbjct: 1075 GTVNCRTVKIDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTN 1134
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLK 249
I A G T +S +G ++ +G G G+ G K V+ P VE L+
Sbjct: 1135 IDFVACGEYHTCAVSTSGDLFTWGD---GIHNVGLLGHGSDLSHWIPKRVSGP--VEGLQ 1189
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
V+ A G + +A+ + G+++TF G LGH + P + L + +++
Sbjct: 1190 ---VLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEV-KMLSGLKTMKV 1245
Query: 310 AAGYCYLLALA-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
A G + +A+ S +++ G G +LGHG++ P + N Q
Sbjct: 1246 ACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQ 1305
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATG 421
+ A G + G V T G +G LG N + + +P +VQ L ++ G
Sbjct: 1306 QI--ACGHTLTVALTTSGHVFTMGGTSHGQLGSSNSDGK-LPCLVQDRLVGEFVEEISCG 1362
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
D+ V++ +V+++G G + LGH D + TP LV +LK+
Sbjct: 1363 DHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRK--------TPTLVEALKE 1405
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q +W
Sbjct: 22 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQ----AW--------------------VF 56
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G
Sbjct: 57 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHI 116
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 117 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSD 175
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVY 232
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G+ ++ P + Q + +Q VA G H V+ +G+V WG
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANS 290
Query: 390 YGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ +S P V D + I +T+ ++ G VY +G C G+S L
Sbjct: 291 YGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILP 350
Query: 447 H 447
H
Sbjct: 351 H 351
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 251
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 47 LQLIRQAWVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 103
Query: 252 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 104 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 161
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 162 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 217
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 218 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 278 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 326
Query: 489 NAHTFALTESGKLYAFG 505
+A A T+ G +Y +G
Sbjct: 327 SA---AKTQGGHVYMWG 340
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
GN N TP V +L+ + + V AHT LT+ G++YA+GA
Sbjct: 244 -------LGNS-GNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 288
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 16/288 (5%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 215
++ VT V++ G+N SG LG G + PR I L G +I+ + G G ++I+ A
Sbjct: 43 ALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATAD 102
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+VYA+G + + + G L +P LV + L + V + A G+ T L+ +G VY
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGL--TPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYA 160
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + N ++G + N P + L+N VV IA G L ++A +G +Y G
Sbjct: 161 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDNG-EIYGWGYN 217
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G+ +++ P I Q +N+ V VA G H + +G V WG YG LG
Sbjct: 218 CNGQLGLGNNGNQQTPCRIAALQGVNI--VQVACGYAHTLALTDEGFVYAWGANSYGQLG 275
Query: 395 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GN+ +++P + + + +V A H + +T+ ++ G V +G
Sbjct: 276 TGNKSNQALPTPINTDKERIVEVAACHTS---HTSAAKTQSGQVLMWG 320
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 25/289 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 211
GP H + T+ G VY++G N QLG+GTT P + + L R+ + A G+ T+
Sbjct: 93 GP-HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIA 151
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 270
++ G+VYA+G ++ G+ G + +P+ V S L+N VV A G + + G
Sbjct: 152 LTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNG 209
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y + + + +LG N P + L+ + +VQ+A GY + LAL G VY+
Sbjct: 210 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNIVQVACGYAHTLALT--DEGF-VYA 265
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH----AAVVGQDGRVCTWG 386
G G+LG G+++++ P I + +V A H +A Q G+V WG
Sbjct: 266 WGANSYGQLGTGNKSNQALPTPIN-----TDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
R G + +DV A AT T ++S DGD Y
Sbjct: 321 QCR------GQAVASPHLTHFSSTDDVFAC-FATPAVTWHLLSVDGDDY 362
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 206
++ G H+IA+T+ G VY++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 140 TEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQ 199
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+M + D G++Y +G + G+ G G + +P + +L+ + +VQ A G T L
Sbjct: 200 LCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGVNIVQVACGYAHTLAL 257
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
+ EG VY + + +LG + N P P+ E I V++AA
Sbjct: 258 TDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKERI--VEVAA 300
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P L+ LL+ + VA G+ H + DG V WG+
Sbjct: 105 VYAWGHNGYSQLGNGTTNHGLTPALVST-NLLSKRVTEVACGSHHTIALTTDGEVYAWGY 163
Query: 388 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 444
G +G G+ + P+ V + L + +++A G + V ++G++Y +G C
Sbjct: 164 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLG 223
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+N GN+ TP + +L+ VN +VQ++ AHT ALT+ G +YA+
Sbjct: 224 LGNN------GNQQ----TPCRIAALQGVN--IVQVACGY-----AHTLALTDEGFVYAW 266
Query: 505 GAGDKGQLGIELVNNQTERGNPERVDID 532
GA GQLG N++ + P ++ D
Sbjct: 267 GANSYGQLG---TGNKSNQALPTPINTD 291
>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
Length = 267
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 34/265 (12%)
Query: 275 FSWG--NDARLGHHTEPND--------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
F WG +D +LG T P + + P G LE +I A Y +++ + +
Sbjct: 24 FVWGCSDDWQLGIETGPKNYQISDPVQITPDYWQGKLE-----KIYAQSNYSMSIDTKGN 78
Query: 325 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
V+S G G G+LG+ +K+P++IE F + N+ +A G H+A G++
Sbjct: 79 ---VFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLY 135
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG G G LGHG+ + E +PK V+ D++ + +A GD T + VY +G ++
Sbjct: 136 TWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAG 195
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG + + V P+ + Q + VVQI H+ ALT G++Y+
Sbjct: 196 QLGFQDL--------SRVNLPKKIMFFNQ--KEVVQIQCGKK-----HSIALTVEGQVYS 240
Query: 504 FGAGDKGQLGIELVNNQTERGNPER 528
+G+ + GQLGI+L + PE+
Sbjct: 241 WGSNEYGQLGIQLGKQSGKMTCPEQ 265
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQ 255
++ + A + +M I G V+++G FG Y + K P+++E S++NI V +
Sbjct: 59 KLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGY-EKDVKYQKYPKIIETFSIQNIIVTK 117
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
A+G +A + +G++YT+ G + +LGH + N+ P + ++I V++IA G +
Sbjct: 118 IALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKK-VKEFQDIRVLEIACGDSH 176
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 374
+A+ SG VY G G+LG + P+ I N + VV + G H+
Sbjct: 177 TMAII---SGNLVYGWGFNQAGQLGFQDLSRVNLPKKI---MFFNQKEVVQIQCGKKHSI 230
Query: 375 VVGQDGRVCTWGWGRYGCLG 394
+ +G+V +WG YG LG
Sbjct: 231 ALTVEGQVYSWGSNEYGQLG 250
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS A T++G +Y++G +GQLGHG+ + E P+ ++ Q IR+++ A G TM I
Sbjct: 121 GTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAI 180
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
VY +G + G+ G Q V P+ + VVQ G + L+ EG+V
Sbjct: 181 ISGNLVYGWGFNQAGQL--GFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQV 238
Query: 273 YTFSWGND 280
Y SWG++
Sbjct: 239 Y--SWGSN 244
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIR--SLQGIRIIQAAAGAGR 208
A +S+++ +KG V+S+GS G+LG+ + + P+ I S+Q I + + A G
Sbjct: 65 AQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHH 124
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G++Y +G+ G+ +G + + P+ V+ ++I V++ A G+ T +
Sbjct: 125 SAACTNQGKLYTWGQGVNGQLGHGSNQNEEI--PKKVKEFQDIRVLEIACGDSHTMAIIS 182
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
VY + + +LG P ++ VVQI G + +AL + V
Sbjct: 183 GNLVYGWGFNQAGQLGFQDLSRVNLPKKIM-FFNQKEVVQIQCGKKHSIALTVEGQ---V 238
Query: 329 YSVGCGLGGKLG 340
YS G G+LG
Sbjct: 239 YSWGSNEYGQLG 250
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ S +VY +G N +GQLG P+ I ++Q G ++ +
Sbjct: 173 GDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIAL 232
Query: 213 SDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLV 245
+ GQVY++G + +G+ + G Q K+ Q +
Sbjct: 233 TVEGQVYSWGSNEYGQLGIQLGKQSGKMTCPEQQI 267
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 38/367 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+ A +G H++ + + G ++++G N GQLG+GT ++ P P+ +I A+G
Sbjct: 402 ADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTD---VISVASGYR 458
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T + G V+ +G + FG+ G + P V+ + V A G+ + L
Sbjct: 459 HTAALRSDGTVWTWGMNRFGQLGEGT----VTDRPTPVQVVGLGGVTAIATGDNHSLALR 514
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G V+ + + +LG T + +P G L NI V IAAG + LAL +
Sbjct: 515 SNGTVWAWGFNRYGQLGDGTAVDRRQPVQASG-LSNI--VAIAAGGSHSLALRSDGT--- 568
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG+G+RT P Q + L VV +AAG+ ++ + DG V WG
Sbjct: 569 VWAFGYNFDGQLGNGTRTWTLVP-----VQAVGLSSVVSLAAGSLYSLALRADGTVWAWG 623
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ G LG G + + P V L+ + +I A G Y + + DG V+++G LG
Sbjct: 624 YNASGQLGVGTTQGSAQPLQVPGLSGITSI--AAGSYHSLALRSDGWVWAWGFNFEGQLG 681
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ TP+L L V I I + H+ A+ G ++A+G
Sbjct: 682 N------------GTSTPRLSPGLVAGMSNAVAI-----IAGDQHSLAMKADGTVWAWGL 724
Query: 507 GDKGQLG 513
KGQLG
Sbjct: 725 NIKGQLG 731
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 168/370 (45%), Gaps = 48/370 (12%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LQGIRIIQAAAGAGR 208
+AG HS+AV + G V+++G N QLG G P P+++ G+ ++ AG
Sbjct: 305 VAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSS--PLPLQAGMTGGVTLV---AGYRH 359
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G +++G + FG+ G + +P V L + A G T +L
Sbjct: 360 SVALGADGTAWSWGDNVFGQ--LGDTTFEPRMAPVQVSGLA-LGRADATSGQLHTVMLGA 416
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
GR++ +WG++ +LG+ T+ + P P+ V+ +A+GY + AL +
Sbjct: 417 NGRLW--AWGDNQQGQLGNGTQQDSSLPLPV----NLTDVISVASGYRHTAALRSDGT-- 468
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
V++ G G+LG G+ TD P Q++ L V +A G H+ + +G V W
Sbjct: 469 -VWTWGMNRFGQLGEGTVTDRPTP-----VQVVGLGGVTAIATGDNHSLALRSNGTVWAW 522
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G+ RYG LG G P L+++ AI A G + + DG V++FG L
Sbjct: 523 GFNRYGQLGDGTAVDRRQPVQASGLSNIVAI--AAGGSHSLALRSDGTVWAFGYNFDGQL 580
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT-NSIYWNAHTFALTESGKLYAF 504
G+ G R L P L V +SL S+Y + AL G ++A+
Sbjct: 581 GN-------GTRTW-TLVPVQAVGLSSV------VSLAAGSLY----SLALRADGTVWAW 622
Query: 505 GAGDKGQLGI 514
G GQLG+
Sbjct: 623 GYNASGQLGV 632
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 171/392 (43%), Gaps = 54/392 (13%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV S G V+++G N GQLG GT+ ++ P + L ++ AAG ++ +
Sbjct: 61 HSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL--TQVTSVAAGDQYSLALDAD 118
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G ++ G+ G ++L+ PQ V +L N VV A G L +G V+ +
Sbjct: 119 GAVWAWGDNASGQLGDGTLTSRLL--PQRVSALSN--VVSLASGFAHVLALRADGTVWAW 174
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
+ +LG T P + G VV + AG LAL + +++ G
Sbjct: 175 GDNRNNQLGDGTLTRSSVPLQVPGL---SGVVAVVAGGSSSLALRADGT---LWAWGDNR 228
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G+ R I Q+ +L V V+ GA+HA + DG V WG YG LG
Sbjct: 229 YGQLGDGTTV-----RRITPVQVASLDSVVSVSVGAYHALALRADGTVWAWGHNAYGQLG 283
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI---- 450
G + P V +L DV+ + G+Y + V DG V+++G LG +
Sbjct: 284 DGTNTQRTQPVSV-SLTDVRTL--VAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSP 340
Query: 451 ------------------------ADGQGNRHANVLTPQLVTSLKQVNERVVQIS----- 481
ADG + + QL + + VQ+S
Sbjct: 341 LPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALG 400
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
++ HT L +G+L+A+G +GQLG
Sbjct: 401 RADATSGQLHTVMLGANGRLWAWGDNQQGQLG 432
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 39/364 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG S+A+ + G ++++G N GQLG GTT P + SL ++ + GA +
Sbjct: 206 VAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLD--SVVSVSVGAYHAL 263
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+A+G +++G+ G + T P V SL ++ + A GN+ + + +G
Sbjct: 264 ALRADGTVWAWGHNAYGQLGDGTNTQR--TQPVSV-SLTDVRTLVA--GNYHSLAVRTDG 318
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ +WG++ T P PL + V + AGY + +AL + +S
Sbjct: 319 AVW--AWGDNRYRQLGTGNLTSSPLPLQAGMTG--GVTLVAGYRHSVALGADGT---AWS 371
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G + G+LG PR+ Q L L +G H ++G +GR+ WG +
Sbjct: 372 WGDNVFGQLGD----TTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQ 427
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG+G ++ S+P V L DV I VA+G T + DG V+++G LG
Sbjct: 428 QGQLGNGTQQDSSLPLPVN-LTDV--ISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGT 484
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+ D TP V L V + H+ AL +G ++A+G
Sbjct: 485 VTDRP--------TPVQVVGLGGVTAIATG---------DNHSLALRSNGTVWAWGFNRY 527
Query: 510 GQLG 513
GQLG
Sbjct: 528 GQLG 531
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 43/361 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ + G V+++G N+ GQLG GT + +P + SL +R + AG ++ +
Sbjct: 261 HALALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSV-SLTDVRTL--VAGNYHSLAVRTD 317
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G + + + G L +SP +++ V A G + L +G +
Sbjct: 318 GAVWAWGDNRYRQLGTG----NLTSSPLPLQAGMTGGVTLVA-GYRHSVALGADGTAW-- 370
Query: 276 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
SWG++ +LG T + P + G + +G + + L +++ G
Sbjct: 371 SWGDNVFGQLGDTTFEPRMAPVQVSGLA--LGRADATSGQLHTVMLGANGR---LWAWGD 425
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG+G++ D P + NL V+ VA+G H A + DG V TWG R+G
Sbjct: 426 NQQGQLGNGTQQDSSLPLPV------NLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQ 479
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG G P V L V AI ATGD + + +G V+++G LG D
Sbjct: 480 LGEGTVTDRPTPVQVVGLGGVTAI--ATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVD 537
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+ A+ L+ +V I+ S H+ AL G ++AFG GQL
Sbjct: 538 RRQPVQASGLS------------NIVAIAAGGS-----HSLALRSDGTVWAFGYNFDGQL 580
Query: 513 G 513
G
Sbjct: 581 G 581
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 150 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
AIA G HS+A+ S G V+++G N GQLG GT + R +P+++ I+ AAG
Sbjct: 502 AIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVD--RRQPVQASGLSNIVAIAAGGSH 559
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G V+AFG + G+ G + LV V+++ VV A G+ ++ L
Sbjct: 560 SLALRSDGTVWAFGYNFDGQLGNGTRTWTLVP----VQAVGLSSVVSLAAGSLYSLALRA 615
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G V+ + + +LG T +P + G L I IAAG + LAL S V
Sbjct: 616 DGTVWAWGYNASGQLGVGTTQGSAQPLQVPG-LSGI--TSIAAGSYHSLAL---RSDGWV 669
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
++ G G+LG+G+ T P L+ V + AG H+ + DG V WG
Sbjct: 670 WAWGFNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAGDQHSLAMKADGTVWAWGLN 725
Query: 389 RYGCLGHGNEECESVPKVVQALN 411
G LG G+ P VQ ++
Sbjct: 726 IKGQLGTGDTTEAWFPVQVQGIH 748
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 139 GEACCRRENSQA---------IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
G A RR+ QA AG HS+A+ S G V++FG N GQLG+GT W
Sbjct: 533 GTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGT--RTWTLV 590
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
P++++ ++ AAG+ ++ + G V+A+G ++ G + GV T+ P V L
Sbjct: 591 PVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASG--QLGVGTTQGSAQPLQVPGLS 648
Query: 250 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
I + A G++ + L +G V+ + + + +LG+ T + P L+ + N V I
Sbjct: 649 GITSIAA--GSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG-LVAGMSN--AVAI 703
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
AG + LA+ + V++ G + G+LG G T+ P ++
Sbjct: 704 IAGDQHSLAMKADGT---VWAWGLNIKGQLGTGDTTEAWFPVQVQ 745
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V+ A+G + + + +G V+ + + +LG T + P + G + V +AAG
Sbjct: 53 VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQ---VTSVAAGD 109
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
Y LAL AV++ G G+LG G+ T P+ + V +A+G H
Sbjct: 110 QYSLALDADG---AVWAWGDNASGQLGDGTLTSRLLPQRVSALS----NVVSLASGFAHV 162
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 433
+ DG V WG R LG G SVP V L+ V + V G ++ + DG
Sbjct: 163 LALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGV--VAVVAGGSSSLALRADGT 220
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 493
++++G LG DG R +TP V SL V + Y H
Sbjct: 221 LWAWGDNRYGQLG-----DGTTVRR---ITPVQVASLDSVVSV------SVGAY---HAL 263
Query: 494 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
AL G ++A+G GQLG T+R P V +
Sbjct: 264 ALRADGTVWAWGHNAYGQLGD---GTNTQRTQPVSVSL 298
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
L PV +A G +H+ V DG V WG+ R G LG G ++ P V L V + VA
Sbjct: 50 LPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQVTS--VAA 107
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
GD + + DG V+++G S LG + + L PQ V++L V +
Sbjct: 108 GDQYSLALDADGAVWAWGDNASGQLGDGTL--------TSRLLPQRVSALSNV------V 153
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
SL + AH AL G ++A+G QLG
Sbjct: 154 SLASGF---AHVLALRADGTVWAWGDNRNNQLG 183
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 15/292 (5%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+Y++G ++G LGHG +E P + +L G I + A GA T+ +S G+V+++G
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGY 268
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL---SREGRVYTFSWGNDAR 282
G G + +P + L+++ + Q A F +A + S++G +++F + +
Sbjct: 269 GGRLGQGHLRDRF--TPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQ 326
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LG + + +L + ++A G + ALA S ++ GC G+LG+G
Sbjct: 327 LGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGS---LWLWGCNESGQLGNG 383
Query: 343 SRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEEC 400
+ T P L+E L V+ VA G H+A + + GR+ G YG LG H N+
Sbjct: 384 NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQ 443
Query: 401 E-----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+ +V V+ D + +HVA GD T VV++ G+++++G G+ LGH
Sbjct: 444 DDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGH 495
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 22/306 (7%)
Query: 214 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
DA +Y +G+ + G +G + P +VE+L + + A G T LS++G V+
Sbjct: 205 DACDIYTWGEGTNGMLGHGEDTQE--AHPHVVEALLGKDIRKVACGATHTLALSKDGEVF 262
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-ACQPSGMAVYSVG 332
++ G RLG + P + G LE++ + Q+A + A+ AC G A++S G
Sbjct: 263 SWGSGYGGRLGQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQG-ALFSFG 320
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 391
G+LG D+ I+ L+ + VA G++H+A + + G + WG G
Sbjct: 321 ENDYGQLG--IPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESG 378
Query: 392 CLGHGNEECESVPKVVQALNDVK---AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
LG+GN S+P +++A ND++ + VA GD + +++ G + F CG++
Sbjct: 379 QLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRM--FCCGDNTY---- 432
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERV-VQISLTNSIYWNAHTFALTESGKLYAFGAG 507
GQ H N VT V RV + ++HT +T+ G+++ +G G
Sbjct: 433 ----GQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRG 488
Query: 508 DKGQLG 513
G+LG
Sbjct: 489 KGGRLG 494
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 15/279 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA ++ + G H++A++ G V+S+GS G+LG G + + P I L+ + +
Sbjct: 235 EALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNL 294
Query: 200 IQAAAGAGRTMLI---SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 255
Q A + + S G +++FG++ +G + G+ KL+TS Q V SL + +
Sbjct: 295 TQVACNEFHSAAVCACSKQGALFSFGENDYG--QLGIPEDKLLTSYIQCVSSLSEHKISR 352
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG--TLENIPVVQIAAGY 313
A G+F +A L+ G ++ + +LG+ + P L L + V+++A G
Sbjct: 353 VACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGD 412
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQL---LNLQPVVVAAG 369
+ A + M + G G+LG H + + H ++ + + V VA G
Sbjct: 413 QH-SAFITKKGRM--FCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACG 469
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
H AVV G + TWG G+ G LGHG+ +P ++
Sbjct: 470 DSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIE 508
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 22/255 (8%)
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+YT+ G + LGH + + PH ++ L + ++A G + LAL+ V+S
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPH-VVEALLGKDIRKVACGATHTLALS---KDGEVFSW 264
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---GQDGRVCTWGWG 388
G G GG+LG G D P I + LNL V A +H+A V + G + ++G
Sbjct: 265 GSGYGGRLGQGHLRDRFTPIRICGLESLNLTQV--ACNEFHSAAVCACSKQGALFSFGEN 322
Query: 389 RYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
YG LG ++ S + V +L++ K VA G + + ++E G ++ +GC ES LG+
Sbjct: 323 DYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGN 382
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
GN + L L ++ V++++ + H+ +T+ G+++ G
Sbjct: 383 -------GNYTSTSLPSLLEAGNDLRHDAVMEVACGDQ-----HSAFITKKGRMFCCGDN 430
Query: 508 DKGQLGIELVNNQTE 522
GQLG L +NQ +
Sbjct: 431 TYGQLGAHLNDNQDD 445
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
KL+ ++ + + S+ G HS A+ G ++ +G N SGQLG+G P
Sbjct: 333 KLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPS 392
Query: 190 PIRSLQGIR---IIQAAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQL 244
+ + +R +++ A G + I+ G+++ G +++G+ A VT
Sbjct: 393 LLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVA 452
Query: 245 VESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 302
V + V A G+ TAV++ G ++T+ G RLGH N P + +E
Sbjct: 453 VRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGME 512
Query: 303 NIPVVQIAAG 312
V ++ G
Sbjct: 513 GKHVRGVSCG 522
>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1073
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 162/378 (42%), Gaps = 45/378 (11%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAG 205
SQ AG S+A+ S GV+YS+G+NS GQLG T+ + RP R G +Q +AG
Sbjct: 75 SQFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAG 134
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTA 264
+ I +Y++G + G+A G+ + + Q++ S+ VQ + G +
Sbjct: 135 DDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVL 194
Query: 265 VLSREGRVYTFSWGNDA--RLGH-------HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ +G VY SWG+++ +LG H P + P L + + + Q+ AG
Sbjct: 195 AVCSDGTVY--SWGDNSSGQLGREVGGTMTHYGPGNPNPVSL---PKGVKITQVTAGGKA 249
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
LALA S VYS G G+LG E R + + ++AG H
Sbjct: 250 SLALASDGS---VYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILA 306
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
V DG +WG+G S P V + ++ ++ G + V + DG++Y
Sbjct: 307 VDSDGNTYSWGYG-----------GTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIY 355
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
S+G S LG + + N+ +TP VT T +I H A+
Sbjct: 356 SWGDNSSGQLGQDTGGE-TTNQPGKAVTPDGVT-------------YTQAIAGYRHILAM 401
Query: 496 TESGKLYAFGAGDKGQLG 513
G LY +G QLG
Sbjct: 402 GSDGYLYGWGDNSSSQLG 419
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 153/347 (44%), Gaps = 21/347 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGA 206
+QA AG ++A+ S G VY++G+N+ QLG T P + GI + AG
Sbjct: 655 TQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNAPDKVTPPAGIHYTRVYAGD 714
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ + G +YA+G +S G G G +P V + + I Q G VL
Sbjct: 715 CFALALGSDGNLYAWGDNSAGALGQGRIGAT-SRNPLRVVAPEGITFTQVFTGPSSKHVL 773
Query: 267 S--REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE---NIPVVQIAAGYCYLLALAC 321
+ +G +Y++ + + +LG PL G ++ I Q + G + LAL
Sbjct: 774 ALGSDGNLYSWGYDDSFQLGRQRNALTALGDPLPGKVQAPAGITFTQASTGLNFSLALG- 832
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
S +YS G GL +LG+ ++ +P + +N V AG + A G DG
Sbjct: 833 --SDNNLYSWGNGLKSQLGN-AQMISMYPSNVIMPSGINFTRFV--AGRYFAIAAGSDGN 887
Query: 382 VCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+ +WG+ YG LG +++ + +P ++A + I GD + + DG+ YS+G
Sbjct: 888 LYSWGYNDYGQLGRDISDKSDYMPTKLEAPAGITLIQPQAGDNHSSAIGSDGNTYSWGKS 947
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
LG + D Q + V+ P + ++VQ T+ IY
Sbjct: 948 ADGVLGRDTSGD-QDSHPGKVIFPGVGI------PKLVQFGDTSGIY 987
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 140/343 (40%), Gaps = 47/343 (13%)
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESL 248
P + +GIR +GA ++ + G +Y++G Y Q G P +VE+
Sbjct: 596 PPQGTRGIRFSWIQSGADFSLALGSDGNLYSWG------INYDYQLGHTTSDKPVVVETP 649
Query: 249 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG------HHTEPNDVEPHPLLGT 300
+ QAA G F L +G VYT WGN+ +LG +H P+ V P
Sbjct: 650 AGVRYTQAAAGQKFALALGSDGYVYT--WGNNTYDQLGRSTFGNNHNAPDKVTPP----- 702
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLL 359
I ++ AG C+ LAL + +Y+ G G LG G ++P + + +
Sbjct: 703 -AGIHYTRVYAGDCFALALGSDGN---LYAWGDNSAGALGQGRIGATSRNPLRVVAPEGI 758
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC----ESVPKVVQALNDVKA 415
V + H +G DG + +WG+ LG + +P VQA +
Sbjct: 759 TFTQVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNALTALGDPLPGKVQAPAGITF 818
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
+TG + + D ++YS+G G + LG+ + +NV+ P + + V
Sbjct: 819 TQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMIS---MYPSNVIMPSGINFTRFVAG 875
Query: 476 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
R I A G LY++G D GQLG ++ +
Sbjct: 876 RYFAI-------------AAGSDGNLYSWGYNDYGQLGRDISD 905
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH--GTTEEEW---RPRPIRSLQGIRIIQAA 203
Q GP + +AV S G VYS+G NSSGQLG G T + P P+ +G++I Q
Sbjct: 185 QVSTGPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVT 244
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NF- 261
AG ++ ++ G VY++G +S G+ L +P E + + A G NF
Sbjct: 245 AGGKASLALASDGSVYSWGDNSSGQ---------LGRTPSASEPANRAYKMTTADGMNFS 295
Query: 262 -----FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ +L+ + T+SWG G ++P+ V + I I+AG+ Y
Sbjct: 296 QISAGYRHILAVDSDGNTYSWG----YGGTSQPSKVA------LPDGIRTRLISAGHDYS 345
Query: 317 LALACQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 374
L A + +YS G G+LG G T + + + + Q + AG H
Sbjct: 346 LVTASDGN---IYSWGDNSSGQLGQDTGGETTNQPGKAVTPDGVTYTQAI---AGYRHIL 399
Query: 375 VVGQDGRVCTWGWGRYGCLGHG 396
+G DG + WG LG G
Sbjct: 400 AMGSDGYLYGWGDNSSSQLGTG 421
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 34/348 (9%)
Query: 94 SISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAG 153
++S L LD+ K +F +E E Q ++Q C
Sbjct: 19 TLSSLKMLDV-GKWPMFSLCSEEELQLIRQAC------------------------VFGS 53
Query: 154 PGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTML 211
G+ + T+ ++ G+N G LG G + PR + SL G +I + G+G +L
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVL 113
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + N ++G + N P + G L+N +V IA G + ++A +G V+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQ--MCSMAVVDTG-EVFVW 229
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG GS ++ P I Q + +Q V A G H V+ +G+V WG YG
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 392 CLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
LG GN+ +S P VV + V I +T+ ++ G VY +G
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + + +A G + V + G+V+ +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 167/359 (46%), Gaps = 31/359 (8%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
+ V K VY +GSNSS QL G E+ P++S ++ Q AG T I G
Sbjct: 342 VGVYEKSDVYVWGSNSSHQLAEGNQEKIL--MPVKSKMFTQVQQVEAGQYCTFAIHWDGS 399
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
V A GK S+G G + + L++ +K + + + G+ T L+ G VY++
Sbjct: 400 VSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGH--TLALAETGVVYSWG 457
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G+ +LGH +P + G + I AGY + + A G +Y+ G G
Sbjct: 458 DGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRH--SAAVTDDG-KLYTWGEGDH 514
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGR-VCTWGWGRYGCLG 394
G+LGHG P Q+ L V VA G+ H VV +DG+ V ++G G +G LG
Sbjct: 515 GRLGHGDSNARYVPT-----QVAGLAEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLG 569
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G P+VV+AL + V G + + ++ G+VY++G G AI G+
Sbjct: 570 TGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSG--------AIL-GK 620
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G+ A V P V L Q R+V IS ++ H ALT+ +++A+G GQ G
Sbjct: 621 GSADAIVNLPMYVEDLAQY--RIVDISAGDN-----HCLALTDEHEVFAWGTNSMGQCG 672
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 27/348 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-G 207
Q AG + A+ G V + G S G+LG G + + P+ I ++ + ++ G+ G
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDG 442
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKNIFVVQAAIGNFFT 263
T+ +++ G VY++G +G+ +G T + +T P L +++K I G +
Sbjct: 443 HTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHA-----GYRHS 497
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
A ++ +G++YT+ G+ RLGH P + G E V +A G + L ++
Sbjct: 498 AAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAE---VGSVACGSSHTLVVS--K 552
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
G V+S G G GKLG G P+++E Q L +Q V AG W + + G V
Sbjct: 553 DGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKV--CAGTWFSMALTTAGEVY 610
Query: 384 TWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
TWG G LG G+ + ++P V+ L + + ++ GD ++++ +V+++G +
Sbjct: 611 TWGSG--AILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWG---T 665
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
S+G GQG+ + + P V L+ V+ R + ++S+ W +
Sbjct: 666 NSMGQC----GQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 24/348 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA-- 206
+ I G + + S G V + G S G+LG G +++ I SLQG I A
Sbjct: 3361 KIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGS 3420
Query: 207 -GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++ ++++G+V+++G FG+ +G + P+ +E+L+ VVQ A G +AV
Sbjct: 3421 DGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ--RRPRQIEALQTEQVVQVACGFKHSAV 3478
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-QPS 324
++ +G+++TF G+ +LG + N P ++ LE + Q+A G L AC
Sbjct: 3479 VTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMA-LEGYRIGQVACG---LNHTACVSTD 3534
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
GM V++ G G GKLG G T + P+ +E + NL V G + +DG+V
Sbjct: 3535 GMTVWTFGEGDYGKLGLGYATMKLLPQKVE--TVCNLGIKKVGCGTHLTLFLTKDGKVFV 3592
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G R E P+++ +L+D +A G ++ G V +G
Sbjct: 3593 CGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQ 3652
Query: 445 LG--HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
LG H ++ RH P+++T L R + T+S W+A
Sbjct: 3653 LGLPHVSLV-----RH-----PEIITELSDKGIRQISTGRTHSAAWSA 3690
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 155/359 (43%), Gaps = 36/359 (10%)
Query: 163 KGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVY 219
K Y +GS+ GQL G+ + P + S R I G T +I G V
Sbjct: 3326 KCKAYMWGSDRHGQLAELGYSAS----VPVQVESFSIARKI--ICGQNCTFVIQSDGTVL 3379
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFS 276
A G+ S+G G + + S ++ SL+ + A + + L+ G V+++
Sbjct: 3380 ACGEGSYGRLGQG--NSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWG 3437
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G+ +LGH P + L+ VVQ+A G+ + A S +++ G G
Sbjct: 3438 DGDFGKLGHGNPDRQRRPRQI-EALQTEQVVQVACGFKHS---AVVTSDGKLFTFGNGDF 3493
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGH 395
GKLG GS ++K P + + + V A G H A V DG V T+G G YG LG
Sbjct: 3494 GKLGLGSVANKKLPERVMALEGYRIGQV--ACGLNHTACVSTDGMTVWTFGEGDYGKLGL 3551
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G + +P+ V+ + ++ V G + T +++DG V F CG H+
Sbjct: 3552 GYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKV--FVCGIDRMPWHSLF----- 3604
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
R V PQ++TSL S+ + H LT GK+ +G +GQLG+
Sbjct: 3605 -RERAVFKPQIMTSLSDY-------SIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL 3655
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 34/253 (13%)
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G+ + WG+D R G E LG ++PV Q+ + + Q +
Sbjct: 3325 GKCKAYMWGSD-RHGQLAE---------LGYSASVPV-QVESFSIARKIICGQNCTFVIQ 3373
Query: 330 SVG----CGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRV 382
S G CG G G+LG G+ D +I Q + + + G+ H+ + + G V
Sbjct: 3374 SDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEV 3433
Query: 383 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WG G +G LGHGN + + P+ ++AL + + VA G + VV+ DG +++FG G+
Sbjct: 3434 FSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDF 3493
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KL 501
LG ++A+ + P+ V +L+ R+ Q++ + HT ++ G +
Sbjct: 3494 GKLGLGSVANKK--------LPERVMALE--GYRIGQVACGLN-----HTACVSTDGMTV 3538
Query: 502 YAFGAGDKGQLGI 514
+ FG GD G+LG+
Sbjct: 3539 WTFGEGDYGKLGL 3551
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 13/221 (5%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA + Q G HS VTS G +++FG+ G+LG G+ + P + +L+G RI
Sbjct: 3459 EALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRI 3518
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q A G T +S D V+ FG+ +G+ G KL+ PQ VE++ N+ + +
Sbjct: 3519 GQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLL--PQKVETVCNLGIKKVGC 3576
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHT---EPNDVEPHPLLGTLENIPVVQIAAGYCY 315
G T L+++G+V F G D R+ H+ E +P ++ +L + + +A G +
Sbjct: 3577 GTHLTLFLTKDGKV--FVCGID-RMPWHSLFRERAVFKPQ-IMTSLSDYSIEDLAVGTEH 3632
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+L L + V G G+LG + +HP +I +
Sbjct: 3633 VLFLT---TCGKVLGWGMTGEGQLGLPHVSLVRHPEIITEL 3670
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 142 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRII 200
C ++ S + GH++A+ GVVYS+G G+LGHG +P I G I
Sbjct: 429 CVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIK 488
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
AG + ++D G++Y +G+ G +G + V P V L + V A G+
Sbjct: 489 YIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYV--PTQVAGLAEVGSV--ACGS 544
Query: 261 FFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
T V+S++G+ V++F G +LG E V ++ L+ + + ++ AG + +AL
Sbjct: 545 SHTLVVSKDGKTVWSFGSGEHGKLG-TGELGKVYRPQVVEALQGLTIQKVCAGTWFSMAL 603
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
+ VY+ G G LG GS + P +E L + V ++AG H +
Sbjct: 604 T---TAGEVYTWGS--GAILGKGSADAIVNLPMYVE--DLAQYRIVDISAGDNHCLALTD 656
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ V WG G G G+ C + + ++ +
Sbjct: 657 EHEVFAWGTNSMGQCGQGH-TCSPITRPLKVI 687
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 431
V+ DG V G G YG LG GN + V+ +L +AT D + ++E
Sbjct: 3371 VIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAES 3430
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G+V+S+G G+ LGH G +R P+ + +L+ E+VVQ++ H
Sbjct: 3431 GEVFSWGDGDFGKLGH-----GNPDRQRR---PRQIEALQ--TEQVVQVACGFK-----H 3475
Query: 492 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+ +T GKL+ FG GD G+LG+ V N + PERV
Sbjct: 3476 SAVVTSDGKLFTFGNGDFGKLGLGSVAN---KKLPERV 3510
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 149/351 (42%), Gaps = 50/351 (14%)
Query: 171 SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 230
SN +G++GHG E+ PR + +L G + A GA T + AG +Y +G G+
Sbjct: 152 SNDNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGA---GQGR 208
Query: 231 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 290
G + P V +L VVQAA G TA ++ GRVYT+ G LGH E
Sbjct: 209 LGHDHERDRFIPLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESA 268
Query: 291 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGLGGKLGHGSRTDEK 348
P + +Q+ ++ +A +G + VY+ G G+LG G RT
Sbjct: 269 CSTPREVASL-----ALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRTPRM 323
Query: 349 HPRLIEQFQLLN------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
P L+ ++ LQ + A + R+ TWG G G LGHG EE E
Sbjct: 324 SPALLADLSSISRIACTYLQSNLPVKRRHRARQLMM--RMWTWGDGASGQLGHGTEEEEL 381
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
VP+ V AL V I VA G T ++ G+V+++G G LGH A
Sbjct: 382 VPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAI-------LRYC 434
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P L+ SLK +SG LYA+G +G LG
Sbjct: 435 KPLLIESLK-------------------------DSGHLYAWGNSRRGALG 460
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 33/281 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAG 207
QA G H+ A+T G VY++G G LGHG PR + SL + ++
Sbjct: 233 QAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASLALQVIVVVIVVVVV 292
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ +G VYA+G + G+ +G + ++ SP L+ L +I + V
Sbjct: 293 AAVVAGGSGTVYAWGGNEKGQLGFGDRTPRM--SPALLADLSSISRIACTYLQSNLPVKR 350
Query: 268 REG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
R R++T+ G +LGH TE ++ P ++ LE + ++ +AAG + AL
Sbjct: 351 RHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVM-ALEQVNIIAVAAGKAHTAALTS 409
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
Q V++ G G G+LGHG+ L +P+++ + + G
Sbjct: 410 QGE---VWTWGDGSDGQLGHGAAI------------LRYCKPLLIES-------LKDSGH 447
Query: 382 VCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 421
+ WG R G LG G EE SVP+ V+A+ K VA G
Sbjct: 448 LYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACG 488
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 151/321 (47%), Gaps = 16/321 (4%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA-GQVY 219
T V+ G+N SG LG G + PR I SL G +I + G+G ++++ A G+VY
Sbjct: 232 TENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVY 291
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G +++ + G L+ + +L N VV+ A G+ + VL+ +G VY + + N
Sbjct: 292 TWGHNAYSQLGNGTTNHGLIPC-HVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNN 350
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
++G + N P + L+N IA G + ++A SG VY G G+L
Sbjct: 351 SGQVGSGSTANQPIPRRVTSCLQNKIATNIACG--QMCSMAVVESG-EVYVWGYNGNGQL 407
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G GS ++ P I Q + +Q V G H V+ +G++ WG YG LG GN+
Sbjct: 408 GLGSSGNQPTPCRIAALQGIRVQR--VTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKS 465
Query: 400 CESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADG 453
+S P V D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 466 NQSYPIPVPVEKDRIIEIAACHSA---HTSAAKTQSGHVYMWGQCRGQSVTLPHLTHFSC 522
Query: 454 QGNRHANVLTPQLVTSLKQVN 474
+ A TP + L V+
Sbjct: 523 TDDVFACFATPAVTWRLLSVD 543
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T++G VY++G N+ QLG+GTT P + + L ++++ A G+ ++
Sbjct: 277 SGP-HVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSL 335
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 269
+++ G+VYA+G ++ G+ G + + P+ V S L+N A G + +
Sbjct: 336 VLTSDGEVYAWGYNNSGQVGSGSTANQPI--PRRVTSCLQNKIATNIACGQMCSMAVVES 393
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++ GY + L L + +
Sbjct: 394 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQ---L 448
Query: 329 YSVGCGLGGKLGHGSRTDEKHP--------RLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
Y+ G G+LG G+++++ +P R+IE + A +A Q G
Sbjct: 449 YAWGANSYGQLGTGNKSNQSYPIPVPVEKDRIIE---------IAACHSAHTSAAKTQSG 499
Query: 381 RVCTWGWGR 389
V WG R
Sbjct: 500 HVYMWGQCR 508
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P + L+N + V VA G+ H+ V+ DG V WG+
Sbjct: 290 VYTWGHNAYSQLGNGTTNHGLIPCHVST-NLVNKKVVEVACGSHHSLVLTSDGEVYAWGY 348
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + A ++A G + V E G+VY +G + LG
Sbjct: 349 NNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLG 408
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +++ AHT LT+ G+LYA+GA
Sbjct: 409 LGS--------SGNQPTPCRIAALQGI--RVQRVTCG-----YAHTLVLTDEGQLYAWGA 453
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 454 NSYGQLGTGNKSNQS 468
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 207
+ G HS+ +TS G VY++G N+SGQ+G G+T + PR + S LQ A G
Sbjct: 326 EVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQM 385
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + ++G+VY +G + G+ G G + +P + +L+ I V + G T VL+
Sbjct: 386 CSMAVVESGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVTCGYAHTLVLT 443
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
EG++Y + + +LG + N P P+ +E +++IAA
Sbjct: 444 DEGQLYAWGANSYGQLGTGNKSNQSYPIPV--PVEKDRIIEIAA 485
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 141 ACCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
+C + + + IA G S+AV G VY +G N +GQLG G++ + P I +LQGIR+
Sbjct: 370 SCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRV 429
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ G T++++D GQ+YA+G +S+G+ G + + P VE I + A
Sbjct: 430 QRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPVEK-DRIIEIAACHS 488
Query: 260 NFFTAVLSREGRVYTFSWG 278
+A ++ G VY WG
Sbjct: 489 AHTSAAKTQSGHVYM--WG 505
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E+ +L+ Q V + ++ V G GCLG G+ + P+ + +L
Sbjct: 210 EELKLIR-QACVFGSAGNEVLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGK 268
Query: 414 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 471
K ++ G VV + +G+VY++ GHNA + G G + ++ + T+L
Sbjct: 269 KITCLSYGSGPHVVVATAEGEVYTW--------GHNAYSQLGNGTTNHGLIPCHVSTNL- 319
Query: 472 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
VN++VV+++ + H+ LT G++YA+G + GQ+G NQ
Sbjct: 320 -VNKKVVEVACGSH-----HSLVLTSDGEVYAWGYNNSGQVGSGSTANQ 362
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 17/281 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H IA+T+ G V+SFG N GQLGHG P+ + +L R A G I
Sbjct: 74 GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALS--RKFVTAVGCSYYHTI 131
Query: 213 ---SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+D ++Y+ G++ +G+ G K SP L+E+L +V G + + V S +
Sbjct: 132 FSCADEMEIYSCGRNDYGQLGLGNLDDK--NSPTLIEALNGKRIVSIGCGQYHSVVSSID 189
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G +++F + +LG ++ L ++N+ QIA GY + +A+ + +Y
Sbjct: 190 GEIFSFGRNDSGQLGITGSDGNI---SLPKEVKNLKSTQIACGYYHTVAI----NNGQLY 242
Query: 330 SVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
S G G+LG G + E P L+ + + + V VA G +H +G G++ ++G
Sbjct: 243 SWGKNDSGQLGIGIYSAKEILPTLVRDLE--DQEIVSVACGCYHTLALGYAGQLFSFGRN 300
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
+G LG G P ++Q L D K +A G Y + V++
Sbjct: 301 SHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLA 341
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 160/338 (47%), Gaps = 41/338 (12%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-----------QLV 245
+ +IQ AAG T++++D G VY+ G + G + QG ++ +LV
Sbjct: 1 MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSL--SQGPNAMSQNNNNNNTRTGQLKLV 58
Query: 246 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
E L KNI + A+ G L+ G+V++F + +LGH + + P + L
Sbjct: 59 EKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQV-EALSR 117
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
V + Y Y +C M +YS G G+LG G+ D+ P LIE LN +
Sbjct: 118 KFVTAVGCSY-YHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEA---LNGKR 172
Query: 364 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATG 421
+V + G +H+ V DG + ++G G LG G++ S+PK V+ L K+ +A G
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL---KSTQIACG 229
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
Y T ++ +G +YS+G +S LG G A + P LV L+ ++ +V ++
Sbjct: 230 YYHTVAIN-NGQLYSWGKNDSGQLG-------IGIYSAKEILPTLVRDLE--DQEIVSVA 279
Query: 482 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 519
HT AL +G+L++FG GQLG NN
Sbjct: 280 C-----GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNN 312
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 161/351 (45%), Gaps = 42/351 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSG-----------QLGHGTTEEEWRPRPIRSLQGI 197
Q AG H++ +T G VYS G N G Q + + + + L+G
Sbjct: 5 QVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGK 64
Query: 198 RIIQ--AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
I++ A+ G + +++ G+V++FG + G+ +G Q + + SP+ VE+L FV
Sbjct: 65 NIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFV-- 120
Query: 256 AAIG-NFFTAVLS--REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
A+G +++ + S E +Y+ + +LG + P L+ L +V I G
Sbjct: 121 TAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSP-TLIEALNGKRIVSIGCG 179
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
+ ++ G ++S G G+LG GS + P+ ++ NL+ +A G +
Sbjct: 180 QYH--SVVSSIDG-EIFSFGRNDSGQLGITGSDGNISLPKEVK-----NLKSTQIACGYY 231
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +G++ +WG G LG G E +P +V+ L D + + VA G Y T +
Sbjct: 232 HTVAI-NNGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGY 290
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
G ++SFG LG DG N N P L+ L ++++V QI+
Sbjct: 291 AGQLFSFGRNSHGQLG-----DGTTN---NSCKPLLIQGL--IDKKVCQIA 331
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAA 204
+++Q G H++A+ + G +YS+G N SGQLG G + +E P +R L+ I+ A
Sbjct: 222 KSTQIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVAC 280
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T+ + AGQ+++FG++S G+ G T P L++ L + V Q A G + +
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGT--TNNSCKPLLIQGLIDKKVCQIAAGFYHSI 338
Query: 265 VLS 267
VL+
Sbjct: 339 VLA 341
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ G ++SFG NS GQLG GTT +P I+ L ++ Q AAG ++++
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVL 340
Query: 213 SD 214
++
Sbjct: 341 AN 342
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 166/338 (49%), Gaps = 40/338 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+T G V+ +G NS G++ G RP I L+ I+Q + G ++ + +
Sbjct: 95 HTLAITKHGTVWGWGYNSKGEITEGGKNIA-RPVQINGLK--DIVQVSTGLVHSLALDQS 151
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+++G++ +G+ G + P VE L NI ++A G + LS +G+V+ +
Sbjct: 152 GAVWSWGENIYGQLGNGTNQDSSI--PTKVEFLSNIVAIEA--GAEHSLALSNDGKVWAW 207
Query: 276 SWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+LG+ TE +++ P L+ LENI + IA G + LAL A+++ G
Sbjct: 208 GRNEFGQLGNGETEKSNI-PR-LVKNLENIEM--IAGGDNHSLALDHDG---AIWAWGYN 260
Query: 335 LGGKLGHGS-RTDEKHPRLIEQ------FQLLNLQPVV--VAAGAWHAAVVGQDGRVCTW 385
G++G GS EK +L E+ +L L V V+AG H+ + ++G V W
Sbjct: 261 SNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAW 320
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
GW YG LG+G+ + VP N+V I + TG Y +F V E G +Y++G
Sbjct: 321 GWNEYGQLGNGSMKDSKVP----LRNNVGRSIIDIETGSYHSFAVDESGVIYAWGDATYG 376
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
LG GNR +T + ++N V++I+
Sbjct: 377 QLGDGTFGK-DGNR---------ITYMVRMNPIVIKIN 404
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 170/375 (45%), Gaps = 49/375 (13%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S + S G V++ G N+ GQLG+GT ++ + L ++ + T+
Sbjct: 41 AGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDEL--YDVVSLDSDMDHTLA 98
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ G V+ +G +S GE +G K + P + LK+I VQ + G + L + G
Sbjct: 99 ITKHGTVWGWGYNSKGEI---TEGGKNIARPVQINGLKDI--VQVSTGLVHSLALDQSGA 153
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ SWG + +LG+ T + P + L NI V I AG + LAL+ V+
Sbjct: 154 VW--SWGENIYGQLGNGTNQDSSIPTKVE-FLSNI--VAIEAGAEHSLALSNDGK---VW 205
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+G PRL++ + + + +A G H+ + DG + WG+
Sbjct: 206 AWGRNEFGQLGNGETEKSNIPRLVKNLENIEM----IAGGDNHSLALDHDGAIWAWGYNS 261
Query: 390 YGCLGHGNEEC-ESVPKVVQALNDV----------KAIHVATGDYTTFVVSEDGDVYSFG 438
G +G G+ E ++ + N K V+ G + ++E+G+VY++G
Sbjct: 262 NGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWG 321
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
E LG+ ++ D + V V ++ I + H+FA+ ES
Sbjct: 322 WNEYGQLGNGSMKDSK------------VPLRNNVGRSIIDIETGS-----YHSFAVDES 364
Query: 499 GKLYAFGAGDKGQLG 513
G +YA+G GQLG
Sbjct: 365 GVIYAWGDATYGQLG 379
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS+A+ G V+S+G N GQLG+GT ++ P + L I I+ AGA
Sbjct: 137 QVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNIVAIE--AGAEH 194
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ +S+ G+V+A+G++ FG+ G T+ P+LV++L+NI ++ A G+ + L
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGE--TEKSNIPRLVKNLENIEMI--AGGDNHSLALDH 250
Query: 269 EGRVYTFSWGNDARLGHHT------------EPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+G ++ + + ++ ++G + + N EP L G + Q++AG +
Sbjct: 251 DGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVK--QVSAGIKHS 308
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
AL VY+ G G+LG+GS D K P + + + G++H+ V
Sbjct: 309 TALTENGE---VYAWGWNEYGQLGNGSMKDSKVPLR----NNVGRSIIDIETGSYHSFAV 361
Query: 377 GQDGRVCTWGWGRYGCLGHG 396
+ G + WG YG LG G
Sbjct: 362 DESGVIYAWGDATYGQLGDG 381
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
V + AG + + ++ DG V T G G LG+G E+ S V L DV ++ + D+
Sbjct: 37 VSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDVVSLD-SDMDH 95
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
T +++ G V+ +G + N+ P + LK +VQ+S
Sbjct: 96 -TLAITKHGTVWGWGYNSKGEITEGG---------KNIARPVQINGLKD----IVQVSTG 141
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
H+ AL +SG ++++G GQLG
Sbjct: 142 -----LVHSLALDQSGAVWSWGENIYGQLG 166
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 146/288 (50%), Gaps = 16/288 (5%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 215
++ VT V++ G+N SG LG G + PR I L G +I+ + G G + I+ A
Sbjct: 34 ALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATAD 93
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+V+++G + + + G L +P LV + L V++ A G+ T L+ +G V+
Sbjct: 94 GEVFSWGHNGYSQLGNGTSTHGL--TPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFA 151
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + N ++G + N P + L+N VV IA G L ++A SG +Y G
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACG--QLCSMAVLDSG-EIYGWGYN 208
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G+ +++ P I Q +N+ + VA G H + +G V +WG YG LG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQGVNV--IQVACGYAHTIALTDEGFVYSWGANSYGQLG 266
Query: 395 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GN+ ++VP ++ + +++V A H + +T+ ++ G V +G
Sbjct: 267 TGNKCNQAVPTLINTEKERMSEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTML 211
GP +IA T+ G V+S+G N QLG+GT+ P + + L G R+I+ A G+ T+
Sbjct: 84 GPHVAIA-TADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREG 270
++ G+V+A+G ++ G+ G + +P+ V S L+N VV A G + + G
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQLCSMAVLDSG 200
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y + + + +LG N P + L+ + V+Q+A GY + +AL G VYS
Sbjct: 201 EIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVNVIQVACGYAHTIALT--DEGF-VYS 256
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G++ ++ P LI + + V + +A Q G+V WG R
Sbjct: 257 WGANSYGQLGTGNKCNQAVPTLINT-EKERMSEVAACHTSHTSAAKTQSGQVLMWGQCR 314
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 151/321 (47%), Gaps = 27/321 (8%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P ++ ++ + +AA + ++D +V+A G + G G+ + P+ ++
Sbjct: 15 PEELKLIRQACVFGSAANEALYVTVND--EVFALGTNCSGC--LGLGDLQSTIEPRRIDV 70
Query: 248 LKNIFVVQAAIGNF-FTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 304
L +V + G A+ + +G V FSWG++ ++LG+ T + + P + L
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATADGEV--FSWGHNGYSQLGNGTSTHGLTPALVSTNLLGK 128
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V+++A G + +AL + V++ G G++G GS ++ PR + L N V
Sbjct: 129 RVIEVACGSHHTIALT---TDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKVVV 184
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G + V G + WG+ G LG GN + P + AL V I VA G
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAH 244
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T ++++G VYS+G L G GN+ N P L+ + K ER+ +++ +
Sbjct: 245 TIALTDEGFVYSWGANSYGQL-------GTGNK-CNQAVPTLINTEK---ERMSEVAACH 293
Query: 485 SIYWNAHTFALTESGKLYAFG 505
+ + +A A T+SG++ +G
Sbjct: 294 TSHTSA---AKTQSGQVLMWG 311
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAG 207
+ G H+IA+T+ G V+++G N+SGQ+G G+T + PR + S LQ ++ A G
Sbjct: 132 EVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQL 191
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M + D+G++Y +G + G+ G G + +P + +L+ + V+Q A G T L+
Sbjct: 192 CSMAVLDSGEIYGWGYNCNGQLGLGNNGNQ--QTPCRIAALQGVNVIQVACGYAHTIALT 249
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEP 294
EG VY++ + +LG + N P
Sbjct: 250 DEGFVYSWGANSYGQLGTGNKCNQAVP 276
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G +LG+G+ T P L+ LL + + VA G+ H + DG V WG+
Sbjct: 96 VFSWGHNGYSQLGNGTSTHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 444
G +G G+ + P+ V + L + +++A G + V + G++Y +G C
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLG 214
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+N GN+ TP + +L+ VN V+Q++ AHT ALT+ G +Y++
Sbjct: 215 LGNN------GNQQ----TPCRIAALQGVN--VIQVACGY-----AHTIALTDEGFVYSW 257
Query: 505 GAGDKGQLGI---------ELVNNQTER 523
GA GQLG L+N + ER
Sbjct: 258 GANSYGQLGTGNKCNQAVPTLINTEKER 285
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+AV G +Y +G N +GQLG G + P I +LQG+ +IQ A G T+ ++D G
Sbjct: 193 SMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEG 252
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTF 275
VY++G +S+G+ G + + V P L+ + K + V A + +A ++ G+V
Sbjct: 253 FVYSWGANSYGQLGTGNKCNQAV--PTLINTEKERMSEVAACHTSHTSAAKTQSGQV--L 308
Query: 276 SWGN-------DARLGHHTEPNDV 292
WG L H + +DV
Sbjct: 309 MWGQCRGQAVASPHLTHFSSTDDV 332
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 16/289 (5%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G L+ + +L N V + A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLMPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P I Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRISALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
V D + A H+A +T+ ++ G VY +G C G+S L H
Sbjct: 277 APVVVEKDRIIEIAACHLA---HTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 47/320 (14%)
Query: 106 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 143
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 144 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 252
L ++ + A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKV 182
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 311
VV A G + + G VY + + + +LG + N +P P + L+ I V ++A
Sbjct: 183 VVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN--QPTPCRISALQGIRVQRVAC 240
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 369
GY + L L + VY+ G G+LG G+++++ +P ++E+ +++ + +A
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHT 297
Query: 370 AWHAAVVGQDGRVCTWGWGR 389
+A Q G V WG R
Sbjct: 298 ---SAAKTQGGHVYMWGQCR 314
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLMPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP +++L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRISALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274
>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
Length = 409
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG--RT 209
AG HS VT+ G +Y++G G+LGH +E++ +P+ + +LQG R++ A G+G +T
Sbjct: 2 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT 61
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ ++D V+++G +G + G G+ P ++SL + VV+ G+ F+ L++
Sbjct: 62 LCLTDDDTVWSWGDGDYG--KLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 119
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VYT+ G+ RLGH ++ + P + G L+ V+ IA G L + C G VY
Sbjct: 120 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG--SLHCVCCTEDG-EVY 175
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ G G+LG G+ + PRL+ Q
Sbjct: 176 TWGDNDEGQLGDGTTNAIQRPRLVAALQ 203
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
AC + +Y+ G G G+LGH D+ P+L+E Q + + +G + D
Sbjct: 8 ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 67
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
V +WG G YG LG G + VP + +L + + V G + +++ G VY++G
Sbjct: 68 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK 127
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G+ LGH + +V P+ V L+ ++V+ I+ T S+ H TE G
Sbjct: 128 GDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGSL----HCVCCTEDG 172
Query: 500 KLYAFGAGDKGQLGIELVN 518
++Y +G D+GQLG N
Sbjct: 173 EVYTWGDNDEGQLGDGTTN 191
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG--N 260
AAG + ++ AG +Y +GK +G + +L P+LVE+L+ VV A G +
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGD 58
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
T L+ + V+++ G+ +LG P + +L + VV++ G + +AL
Sbjct: 59 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALT 117
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
SG AVY+ G G +LGHGS + PR ++ Q + + +A G+ H +DG
Sbjct: 118 --KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDG 172
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
V TWG G LG G P++V AL K VA G T S
Sbjct: 173 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYT 424
AAG H+A V G + TWG GRYG LGH + E + PK+V+AL + + +A +GD
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T +++D V+S+G G+ LG +DG P + SL + VV++ +
Sbjct: 61 TLCLTDDDTVWSWGDGDYGKLGRGG-SDG-------CKVPMKIDSLTGLG--VVKVECGS 110
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ALT+SG +Y +G GD +LG
Sbjct: 111 QF-----SVALTKSGAVYTWGKGDYHRLG 134
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+A+T G VY++G +LGHG+ + RPR ++ LQG ++I A G+ + ++ G
Sbjct: 113 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDG 172
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+VY +G + E + G T + P+LV +L+ V + A G+ T S
Sbjct: 173 EVYTWGDND--EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 14/301 (4%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
++ G ++ +G G+LG G + P +L IR A G ++ +S GQV
Sbjct: 104 SLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIR--STALGGVHSVALSSLGQV 161
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
+ +G FG + V +L+ P++VE N + A TA ++ G +YT WG
Sbjct: 162 FTWGYGGFGALGHSVYHRELL--PRMVEGSWNAKIRHIATAGTHTAAITESGELYT--WG 217
Query: 279 ND-----ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
D LG + PN+ + ++ +PV A + G +++ G
Sbjct: 218 RDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQ-LWNWGA 276
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
+LG G + P+ I Q +++ + +A+G +H+ + DG+V +WG+G++G L
Sbjct: 277 NSNYELGRGDKVGGWKPQPIPSLQ--DVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQL 334
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GH + E + +P V++AL D I++A G ++ ++++G +Y +G + + LG + +
Sbjct: 335 GHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPET 394
Query: 454 Q 454
Q
Sbjct: 395 Q 395
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 185/411 (45%), Gaps = 58/411 (14%)
Query: 137 LAGEACCR--RENSQAIAGP----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP 190
L G C R S +++ P + AVT+ ++ S+G +SGQLG G E P P
Sbjct: 3 LLGHRCASFMRRMSTSVSAPLLWKAENDAVTTVQLL-SWGRGASGQLGGGIEEMRLYPSP 61
Query: 191 IRSLQ-----------------------GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 227
+ +L G+ + + G + L+ D G+++ +GK G
Sbjct: 62 VATLHLPPSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVVD-GKLWIWGKGDGG 120
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
+G + + P L +L +I A+G + LS G+V+T+ +G LGH
Sbjct: 121 RLGFGQEYPAFL--PTLNPNLDSI--RSTALGGVHSVALSSLGQVFTWGYGGFGALGHSV 176
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG-GKLGHGSRTD 346
++ P + G+ N + IA + A+ SG +Y+ G G G+LG G
Sbjct: 177 YHRELLPRMVEGSW-NAKIRHIATAGTHTAAIT--ESG-ELYTWGRDQGDGRLGLGPNCG 232
Query: 347 EKHPRLIEQFQLLNLQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 403
+ + PV VAA G + V+ Q+G++ WG LG G++
Sbjct: 233 PNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWK 292
Query: 404 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 463
P+ + +L DV+ I +A+G Y + +++DG V S+G G+ LGH++I N
Sbjct: 293 PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI--------ENQKI 344
Query: 464 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P ++ +L +E V+ I+ S + A+T++GKLY +G QLG+
Sbjct: 345 PTVIEAL--ADEHVIYIACGGS-----SSAAITDNGKLYMWGNAKDSQLGV 388
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A++S G V+++G G LGH E PR + +I A T I+++
Sbjct: 151 HSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITES 210
Query: 216 GQVYAFGKDSFGEAEYGV-------QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
G++Y +G+D G+ G+ +G L + P V++L + V + G FFT VL++
Sbjct: 211 GELYTWGRDQ-GDGRLGLGPNCGPNEGGGL-SIPSKVKALP-VPVAAVSCGGFFTMVLTQ 267
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
EG+++ + ++ LG + +P P + +L+++ ++QIA+G + LAL V
Sbjct: 268 EGQLWNWGANSNYELGRGDKVGGWKPQP-IPSLQDVRIIQIASGGYHSLALTDDGK---V 323
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
S G G G+LGH S ++K P +IE L + + +A G +A + +G++ WG
Sbjct: 324 LSWGYGQHGQLGHSSIENQKIPTVIE--ALADEHVIYIACGGSSSAAITDNGKLYMWGNA 381
Query: 389 RYGCLG-HGNEECESVPKVVQALND 412
+ LG G E + +P V+ L +
Sbjct: 382 KDSQLGVPGLPETQPLPVEVKFLME 406
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 37/359 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+AV G V+++G N++GQLG GTT + RP + L + + AAG + +
Sbjct: 470 HSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAV--AAGGSHVLALRSD 527
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+A+G ++ G+ G +L +P V L + V A G++F+ L +G V+T+
Sbjct: 528 GSVWAWGYNALGQLGDGTTVDRL--TPVRVSGLGAVVAVAA--GSYFSMALQSDGTVWTW 583
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G + +LG + P + G L NI ++AAG + ALA + G V++ G
Sbjct: 584 GEGFEGQLGDGGGVQRLSPVRVEG-LANI--TRVAAGSAH--ALAVRGDGT-VWAWGDNG 637
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG GS D P Q+ LQ + V+ G H+ + DG V WG+ YG LG
Sbjct: 638 EGQLGDGSWADRFRP-----VQVPGLQGITAVSGGRSHSMALQGDGTVRAWGYNGYGQLG 692
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G P ++ L ++A+H + + DG + +G LG A
Sbjct: 693 DGTLTSRVRPALIPGLTGIQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGAA---- 746
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P V + +V+ V AHT + G + A+G GQLG
Sbjct: 747 ----GWSAVPVQVRGIGRVDRLSVG---------RAHTLMVRADGTVMAWGENGSGQLG 792
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 175/415 (42%), Gaps = 83/415 (20%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ AG H++AV G V+++G N GQLG G+ + +RP + LQGI + + G
Sbjct: 612 TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQGITAV--SGGRS 669
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---------------- 251
+M + G V A+G + +G+ G +++ P L+ L I
Sbjct: 670 HSMALQGDGTVRAWGYNGYGQLGDGTLTSRV--RPALIPGLTGIQALHPSHLHVLALHAD 727
Query: 252 --------------------------------FVVQAAIGNFFTAVLSREGRVYTFSWGN 279
V + ++G T ++ +G V +
Sbjct: 728 GTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENG 787
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+LG T + P + G +P V+ +A+G + LALAC + V++ G G+
Sbjct: 788 SGQLGDGTSTHRTGPVSVPG----VPCVRSVASGIQHSLALACDGT---VWAWGANARGQ 840
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
LG G+ T P L+E + + V +AAG + + DG V +WG G LG G
Sbjct: 841 LGDGTTTPRVTPGLVEGLRGV----VALAAGGDASVALRADGSVWSWGGNASGQLGDGTL 896
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
++P V+ L++ A+ VA G+ V EDG ++++G S LG A
Sbjct: 897 TDRALPAHVEHLSN--AVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAP------ 948
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
LTP V L ERV ++ A + A+ + G +A+G GQLG
Sbjct: 949 --SLTPVRVKGL----ERVASVAAG-----RAFSVAVRDDGTAWAWGTNPSGQLG 992
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 184/420 (43%), Gaps = 64/420 (15%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 209
AG H +A+++ G V+++G N+ GQLG G++ W PR + L+G+ + AAG T
Sbjct: 1016 AGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMW-PRQVPELRGVEAV--AAGEQFT 1072
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA--AIGNFFTAVLS 267
+ + G A+G + +G+ G G +L +E K V+ A G +S
Sbjct: 1073 VAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMS 1132
Query: 268 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+G V T WG++ +LG T P + G VV +++G + LAL +
Sbjct: 1133 -DGTVQT--WGDNTFGQLGDGTTTRRAVPLTVYGLAS---VVAVSSGAWHSLALLSDGT- 1185
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
V++ G G+LG G+ T P Q+ L VV + +G +HA V DG V T
Sbjct: 1186 --VWAWGANGFGQLGDGTSTPRTRP-----VQVAGLGDVVAIGSGGYHALAVCSDGSVWT 1238
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG+ +G LG G E S+P V+ L V + VA GD+ + + DG + ++G S
Sbjct: 1239 WGYNAFGQLGDGTAESRSLPTRVEGLEGV--VAVAGGDHYSLALHSDGTLSAWGNNASGQ 1296
Query: 445 LG---------------------------HNAIADGQG-------NRHANVLTPQLVTSL 470
LG H G G N + T +
Sbjct: 1297 LGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM 1356
Query: 471 KQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+ V V +S +++ A HTFA+ G ++ +G GQLG+ N+TE P RV
Sbjct: 1357 RLVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTE---PLRV 1413
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 172/414 (41%), Gaps = 87/414 (21%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA-------- 202
++G HS+A+ + G V+++G NSSGQLG GTT + P + L + + A
Sbjct: 115 VSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDSVVAVAAGDFHSLAL 174
Query: 203 ----------------------------------------AAGAGRTMLISDAGQVYAFG 222
AAG T+ + + G V A+G
Sbjct: 175 REDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGVVALAAGFDFTLAVLEDGTVRAWG 234
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA- 281
+ G+ G +L SP V L I V+A G + L ++G V+T WG++A
Sbjct: 235 SNGSGQLGDGTSTQRL--SPVKVSELSGITEVRA--GTYHALALGKDGGVWT--WGSNAS 288
Query: 282 -RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LG T + P + G LE + V +LA +G AV++ G G+LG
Sbjct: 289 GQLGDGTWNDRAVPMQVPG-LERVKAVA----SMDSDSLALLDTG-AVFAWGANGSGQLG 342
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
G TD P + + V GA HA V+ +DG + WG G G LGHG E
Sbjct: 343 DGDTTDRATPGPVPGLNAV----ASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSER 398
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 460
VP V L V ++ ATG + + DG V+++G LG + A+ RHA
Sbjct: 399 HVVPAPVMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAE----RHAA 452
Query: 461 VLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 513
V RV + S+ A H+ A+ G ++A+G GQLG
Sbjct: 453 V--------------RVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLG 492
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 163/365 (44%), Gaps = 39/365 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+ G H++ + G ++++G SGQLGHG +E P P+ L G+ + A G+ ++
Sbjct: 365 VGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSM--ATGSFHSL 422
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
G V+A+G++++G + G T + VE L + V +A + + +G
Sbjct: 423 AALGDGSVWAWGRNTYG--QLGDGSTAERHAAVRVEGLGGVRSVASAA--HHSLAVGMDG 478
Query: 271 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+ +WG +A +LG T + P + G V +AAG ++LAL S V
Sbjct: 479 TVW--AWGRNAAGQLGDGTTLDRARPVAVPGLTS---VTAVAAGGSHVLALRSDGS---V 530
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
++ G G+LG G+ D P + + V VAAG++ + + DG V TWG G
Sbjct: 531 WAWGYNALGQLGDGTTVDRLTPVRVSGLGAV----VAVAAGSYFSMALQSDGTVWTWGEG 586
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LG G P V+ L ++ VA G V DG V+++G LG
Sbjct: 587 FEGQLGDGGGVQRLSPVRVEGLANIT--RVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG 644
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ AD R V P L + + +S S H+ AL G + A+G
Sbjct: 645 SWAD----RFRPVQVPGL--------QGITAVSGGRS-----HSMALQGDGTVRAWGYNG 687
Query: 509 KGQLG 513
GQLG
Sbjct: 688 YGQLG 692
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 173/391 (44%), Gaps = 43/391 (10%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
N+ A+A G H++AV G ++++G+N SGQLG G T P ++ L+ R+ AA
Sbjct: 909 SNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLE--RVASVAA 966
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ + D G +A+G + G+ G + V P V SLK I + A G
Sbjct: 967 GRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSV--PNQVTSLKGIRAMSA--GAHHVV 1022
Query: 265 VLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
LS +G V+T WG++ +LG + P + P + E V +AAG + +A+
Sbjct: 1023 ALSADGTVWT--WGDNTLGQLGDGSSSPTGMWPRQV---PELRGVEAVAAGEQFTVAVLL 1077
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW--HAAVVGQD 379
+ A G G+LG G + P + + + ++P V AW HA V D
Sbjct: 1078 DGTARA---WGSNEYGQLGDGKTGPQLTPMAV-KIEGPKIRPPVRTVRAWGQHAVVQMSD 1133
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G V TWG +G LG G +VP V L V + V++G + + + DG V+++G
Sbjct: 1134 GTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASV--VAVSSGAWHSLALLSDGTVWAWGA 1191
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G + DG P V L V +++ + Y H A+ G
Sbjct: 1192 N-----GFGQLGDGTSTPRTR---PVQVAGLGDV------VAIGSGGY---HALAVCSDG 1234
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
++ +G GQLG R P RV+
Sbjct: 1235 SVWTWGYNAFGQLGD---GTAESRSLPTRVE 1262
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 166/369 (44%), Gaps = 48/369 (13%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+ ++ G V+++G N SGQLG T + P+R I+ +G ++
Sbjct: 65 AGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQ-GLAPVRLAALENIVSVVSGDAHSLA 123
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G +S G+ G T +P V L ++ V A G+F + L +G
Sbjct: 124 LGADGSVWTWGGNSSGQLGDGT--TTDRATPMRVAGLDSVVAVAA--GDFHSLALREDGT 179
Query: 272 VYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPS 324
V+ +WG + +LG HT+P T E +P VV +AAG+ + LA+ +
Sbjct: 180 VW--AWGTNFHGQLGRGHTQPGL--------TPEQVPGLNGVVALAAGFDFTLAVLEDGT 229
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V + G G+LG G+ T P + + + V AG +HA +G+DG V T
Sbjct: 230 ---VRAWGSNGSGQLGDGTSTQRLSPVKVSELSGIT----EVRAGTYHALALGKDGGVWT 282
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G LG G +VP V L VKA VA+ D + + + G V+++G S
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLERVKA--VASMDSDSLALLDTGAVFAWGANGSGQ 340
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG DG A TP V L V V H L + G L+A+
Sbjct: 341 LG-----DGDTTDRA---TPGPVPGLNAVASVVGGAQ---------HALVLRKDGTLWAW 383
Query: 505 GAGDKGQLG 513
G G GQLG
Sbjct: 384 GGGLSGQLG 392
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 18/299 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+ S G V+++G+N GQLG GT+ RP + L ++ +G +
Sbjct: 1172 SGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLG--DVVAIGSGGYHALA 1229
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G ++FG+ G ++ + P VE L+ + V A G+ ++ L +G
Sbjct: 1230 VCSDGSVWTWGYNAFGQLGDGTAESRSL--PTRVEGLEGVVAV--AGGDHYSLALHSDGT 1285
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
+ +WGN+A G + + + VV + AG + +AL + V++
Sbjct: 1286 LS--AWGNNAS-GQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGT---VWTW 1339
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ RL+ + + NL V V AGA H V G V TWG +
Sbjct: 1340 GDNAFGQLGDGASGTRM--RLVPR-PVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSH 1396
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G+ + P V+ L+DV V+ G + + DG V S+G SLG A
Sbjct: 1397 GQLGLGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWGSSLYGSLGLGA 1453
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 43/334 (12%)
Query: 200 IQAAAGAGRTMLISDAGQVYAF---GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
++ AAG ++ +S G V+A+ G G AE +QG +P + +L+NI V +
Sbjct: 61 MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQG----LAPVRLAALENIVSVVS 116
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G+ + L +G V+T+ + +LG T + P + G L++ VV +AAG +
Sbjct: 117 --GDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAG-LDS--VVAVAAGDFHS 171
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAV 375
LAL + V++ G G+LG G P L EQ LN V +AAG
Sbjct: 172 LALREDGT---VWAWGTNFHGQLGRG----HTQPGLTPEQVPGLN-GVVALAAGFDFTLA 223
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
V +DG V WG G LG G P V L+ + + T Y + +DG V+
Sbjct: 224 VLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGT--YHALALGKDGGVW 281
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
++G S LG DG N A P V L ERV ++ +S + AL
Sbjct: 282 TWGSNASGQLG-----DGTWNDRA---VPMQVPGL----ERVKAVASMDS-----DSLAL 324
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
++G ++A+GA GQLG + T+R P V
Sbjct: 325 LDTGAVFAWGANGSGQLGD---GDTTDRATPGPV 355
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++AV S G V+++G N+ GQLG GT E P + L+G+ + A G ++ +
Sbjct: 1226 HALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGV--VAVAGGDHYSLALHSD 1283
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G + A+G ++ G+ G T+ V VV G T L +G V+T
Sbjct: 1284 GTLSAWGNNASGQLGDGTGTTRY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWT- 1338
Query: 276 SWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
WG++A +LG + P P+ L ++ V A + + +AL V++
Sbjct: 1339 -WGDNAFGQLGDGASGTRMRLVPRPVP-NLSSVSAVGAGARHTFAVALKGT-----VWTW 1391
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G T+ P + + + VV+ GA + + +DG V +WG YG
Sbjct: 1392 GRNSHGQLGLGDNTNRTEPLRVRELSDVT----VVSGGADFSLAMKRDGTVLSWGSSLYG 1447
Query: 392 CLGHGNEECESVPKVV 407
LG G S P V
Sbjct: 1448 SLGLGATGHRSSPGQV 1463
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 146 ENSQAIAGPGH-SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
E A+AG H S+A+ S G + ++G+N+SGQLG GT R + ++ A
Sbjct: 1265 EGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT--RYSRVAVKGVDGVVDVRA 1322
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
GA T+ + G V+ +G ++FG+ G GT++ P+ V +L ++ V A + F
Sbjct: 1323 GATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHTFAV 1382
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
L +G V+T+ + +LG N EP + L ++ VV A + +LA +
Sbjct: 1383 AL--KGTVWTWGRNSHGQLGLGDNTNRTEPLRVR-ELSDVTVVSGGADF----SLAMKRD 1435
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHP 350
G V S G L G LG G+ P
Sbjct: 1436 GT-VLSWGSSLYGSLGLGATGHRSSP 1460
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 42/364 (11%)
Query: 148 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 124 SCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACG 183
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T+ +++ G VY FG++ G+ G Q T V SP ++ +V+ A G F+ +
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMI 241
Query: 266 LSREGRVYTFSWGNDARLGHHTEPN----------DVE--PHPLLGTLE----------- 302
+ +G +Y+F +LGH+++ D E P + +E
Sbjct: 242 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVP 301
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
N+ +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 302 NVVARDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG 358
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
+ G + + + G + WG + + + E PK VQ L K +A G
Sbjct: 359 ATQIYCGYQCSFALSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGK 412
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+ V ++D + G S + G D N+ + T Q V +L V V +
Sbjct: 413 SSIIVAADDSTI---SWGPSPTFGELGYGD---NKPKSSTTAQEVKTLDGVYSEQVVMGY 466
Query: 483 TNSI 486
++S+
Sbjct: 467 SHSL 470
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 112 PH-RYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169
Query: 354 EQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 411
E + V+VAA G H + ++G V T+G + G LG GN+ + N
Sbjct: 170 EGLG----EEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN 225
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ VA G + +V G++YSFGC E LGHN+ IA Q L P+ V
Sbjct: 226 GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRV 285
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 286 AIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 37/140 (26%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 442
WG RYGCL +DV+ V +G + +++ +G ++S+G +
Sbjct: 110 WGPHRYGCL-----------------SDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDK 152
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH G R + P+L+ L + E +V + + HT ALTE+G +Y
Sbjct: 153 GQLGH-----GDTKR---LEAPKLIEGLGE--EVIVAAACGRN-----HTLALTENGTVY 197
Query: 503 AFGAGDKGQLGIELVNNQTE 522
FG GQLG NQT+
Sbjct: 198 TFGENKLGQLG---QGNQTD 214
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
+LV F G R +Q G S A++ G ++ +G ++ + E P+
Sbjct: 347 RLVKLFDFPG-----RGATQIYCGYQCSFALSEMGGLFFWGVTNT------SRESTMYPK 395
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
++ L G +I A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 396 AVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLD 455
Query: 250 NIFVVQAAIGNFFTAVLSRE 269
++ Q +G + V++R+
Sbjct: 456 GVYSEQVVMGYSHSLVIARQ 475
>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
Length = 475
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 149/322 (46%), Gaps = 39/322 (12%)
Query: 148 SQAIAG--PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
S+ I G H++ +T++G VYS+G N GQLGHG P+PI SLQ +++ A G
Sbjct: 102 SRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSYKVVNGATG 161
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T+ +++ G V+AFG ++ G+ G T V SP + + K +V + G F+ +
Sbjct: 162 KNHTLCLTENGDVFAFGDNAQGQLGLGNLSTN-VPSPTHI-AYKGNPIVDVSCGGEFSVI 219
Query: 266 LSREGRVYTFSWGNDARLGHHTE---------------------PNDVEPHPLLG----T 300
L EG VY+F +LG++T+ P VE L G
Sbjct: 220 LDCEGYVYSFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVE--KLKGGQVLP 277
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 360
L ++ + I+ G +++AL S V++ G G G+LGH + DE PRL+ F+
Sbjct: 278 LNDVKITSISCGNNHVVALD---SKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAG 334
Query: 361 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 420
V V AG + + + G T WG G + + E PK + L + +
Sbjct: 335 RGAVQVYAGYSFSIALNEMG--STMFWGLQGSI--SSRETTMYPKPLPDLQGWEIRSIGC 390
Query: 421 GDYTTFVVSEDGDVYSFGCGES 442
G Y VV+ D V +G G S
Sbjct: 391 G-YRHTVVAADESVIVWGTGTS 411
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 186 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
++P +SL GI++ + G + ++I++ G VY++G++ G+ +G + SP+
Sbjct: 88 FKPHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNR--VRYDSPK 145
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
++SL++ VV A G T L+ G V+ F +LG +V P P +
Sbjct: 146 PIDSLQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQLGLGNLSTNV-PSPTHIAYKG 204
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 349
P+V ++ G + + L C+ VYS GC G+LG+ TD K+
Sbjct: 205 NPIVDVSCGGEFSVILDCEG---YVYSFGCPEYGQLGN--NTDGKYFASGNKMAFDNVKN 259
Query: 350 ----PRLIEQF---QLLNLQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
P +E+ Q+L L V + + G H + RV TWG+G YG LGH ++
Sbjct: 260 AFRIPLWVEKLKGGQVLPLNDVKITSISCGNNHVVALDSKKRVFTWGFGGYGRLGHSEQK 319
Query: 400 CESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
E P+++ A+ V G + ++E G +G S S
Sbjct: 320 DEHTPRLLTVFERAGRGAVQVYAGYSFSIALNEMGSTMFWGLQGSIS 366
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
P + + + V+ + H ++ +G V +WG G LGHGN PK + +
Sbjct: 90 PHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDS 149
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L K ++ ATG T ++E+GDV++FG L G GN NV +P T
Sbjct: 150 LQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQL-------GLGNLSTNVPSP---TH 199
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ +V +S + L G +Y+FG + GQLG
Sbjct: 200 IAYKGNPIVDVSCGGEF-----SVILDCEGYVYSFGCPEYGQLG 238
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
N +PH +L I V ++ G C L G VYS G G+LGHG+R
Sbjct: 86 NLFKPH-RYKSLVGIKVSRVITGCCSNHNLIITNEG-NVYSWGRNECGQLGHGNRVRYDS 143
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
P+ I+ Q + + V A G H + ++G V +G G LG GN A
Sbjct: 144 PKPIDSLQ--SYKVVNGATGKNHTLCLTENGDVFAFGDNAQGQLGLGNLSTNVPSPTHIA 201
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ----GNRHA--NVLT 463
+ V+ G + ++ +G VYSFGC E LG+N DG+ GN+ A NV
Sbjct: 202 YKGNPIVDVSCGGEFSVILDCEGYVYSFGCPEYGQLGNNT--DGKYFASGNKMAFDNVKN 259
Query: 464 ----PQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P V LK QV + + +T+ N H AL +++ +G G G+LG
Sbjct: 260 AFRIPLWVEKLKGGQVLP-LNDVKITSISCGNNHVVALDSKKRVFTWGFGGYGRLG 314
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG SIA+ G +G S + E P+P+ LQG I G
Sbjct: 339 QVYAGYSFSIALNEMGSTMFWGLQGS----ISSRETTMYPKPLPDLQGWEIRSIGCGYRH 394
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T++ +D + S GE G + K +P L++S N+F+ + + G T +++R
Sbjct: 395 TVVAADESVIVWGTGTSNGELGLG-ESRKSSANPDLMKSASNLFIQRVSCGQTHTLMIAR 453
>gi|269793976|ref|YP_003313431.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096161|gb|ACZ20597.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 737
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 212/510 (41%), Gaps = 75/510 (14%)
Query: 16 IPDQPITAIIVAPVPTFQRNQRHCFGESTPGEFPLAASPSIVLHVLTACNLDPQDLAKLE 75
+PD+ + V P + R E TP E P A SP H LT P D ++
Sbjct: 48 LPDELVATDEVDGAPVVEEIDRGLLEEPTPVELPDAVSPPPP-HALT-----PDDEQEVV 101
Query: 76 ATCSFFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRF 135
A+ + D ++++++L + D E + D + ++
Sbjct: 102 ASAT---------EDEEITVADLESPD------------ETDVSDAPEHA--------KY 132
Query: 136 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ 195
A ++ AG H + + SKG ++++G NSSGQLG+GT P P+ +
Sbjct: 133 PTLSTAASTGRDTHIAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPV-DMT 191
Query: 196 GI----RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
G+ ++ AAGA ++ + G V+A+G++ FGE G + + ++P V L
Sbjct: 192 GVMANSEMVAVAAGARHSLALDSEGNVFAWGRNGFGELGDGTRVDR--STPVRVGGLLAE 249
Query: 252 FVVQAAIGNFFTA---------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL- 301
V+ G T L GRVYT+ G RLG T P + L+G L
Sbjct: 250 QPVERISGGGNTTDAGIQGNSLALGANGRVYTWGAGERGRLGIGTSPASIATPALVGGLI 309
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
+ +V + G + L+ S ++S G G G LG+G+ T P + +L+
Sbjct: 310 ADQHIVDASFGTNNAVVLS---SDGRLFSWGDGSYGALGNGTTTTSASPVAVTMTGVLSG 366
Query: 362 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV-----QALNDVKA 415
+ V AG + G + TWGW G +G+G +VP V +AL + +
Sbjct: 367 VSISQVDAGQLGSIARSVTGELFTWGWNNAGQIGNGTTSNSTVPTRVDMGALEALGN-RP 425
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV-TSLKQVN 474
I + G + DG + ++G S LG + N P V V
Sbjct: 426 IQASAGPAFYMALGADGRLAAWGLNTSGQLG--------AGTNVNASRPVAVRVDGVMVG 477
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAF 504
++Q++ ++S T AL + G+++A+
Sbjct: 478 ANIIQVTNSSS----GTTLALADDGRVFAW 503
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 33/279 (11%)
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHP--LLGTLENIPVVQIAAGYCYLLALACQP 323
L +G+++ + + +LG+ T + P P + G + N +V +AAG + LAL +
Sbjct: 157 LDSKGQIWAWGLNSSGQLGNGTRASSTTPVPVDMTGVMANSEMVAVAAGARHSLALDSEG 216
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA--------- 374
+ V++ G G+LG G+R D P + LL QPV +G +
Sbjct: 217 N---VFAWGRNGFGELGDGTRVDRSTP--VRVGGLLAEQPVERISGGGNTTDAGIQGNSL 271
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQAL-NDVKAIHVATGDYTTFVVSEDG 432
+G +GRV TWG G G LG G + P +V L D + + G V+S DG
Sbjct: 272 ALGANGRVYTWGAGERGRLGIGTSPASIATPALVGGLIADQHIVDASFGTNNAVVLSSDG 331
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
++S+G G +LG+ G A+ + + L V+ V SI
Sbjct: 332 RLFSWGDGSYGALGN-----GTTTTSASPVAVTMTGVLSGVSISQVDAGQLGSI------ 380
Query: 493 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
A + +G+L+ +G + GQ+G +N T P RVD+
Sbjct: 381 -ARSVTGELFTWGWNNAGQIGNGTTSNSTV---PTRVDM 415
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ---ALNDVKAIHVATGD 422
+AAG H + G++ WG G LG+G + P V + + + + VA G
Sbjct: 147 IAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPVDMTGVMANSEMVAVAAGA 206
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQI 480
+ + +G+V+++G LG D TP V L +Q ER+
Sbjct: 207 RHSLALDSEGNVFAWGRNGFGELGDGTRVDRS--------TPVRVGGLLAEQPVERISGG 258
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
T ++ AL +G++Y +GAG++G+LGI
Sbjct: 259 GNTTDAGIQGNSLALGANGRVYTWGAGERGRLGI 292
>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
Length = 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 173/385 (44%), Gaps = 52/385 (13%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
IA P H VT GVV + G GQLG G E+ RP + ++ +I+ A AG T
Sbjct: 47 IAHPSHP-DVTVTGVVLACGEGDVGQLGLGPDVMEKSRPALV-NIDDQKIVSAVAGGMHT 104
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ +++ G+VY FG + G T P V+ L +Q + G+ TAVL+ E
Sbjct: 105 VCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDLLGR--GIQLSAGDSHTAVLTDE 162
Query: 270 GRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPS 324
G+V F+WGN DA + ++ P +E +P V++IA+G +LL C
Sbjct: 163 GKV--FAWGNFRDANGKIGLTSDGIQEKP----IEMLPGETVIKIASGGDHLL---CLTE 213
Query: 325 GMAVYSVGCGLGGKLG--------HGSRTDEKH---PRLIEQFQLLNLQPVV---VAAGA 370
+YS GC G+LG G R + P +I + + + VV V AG
Sbjct: 214 KGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQ 273
Query: 371 WHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVV 428
+ + +D G + WG Y LG + E + VP V+A++ DVK V G + +
Sbjct: 274 YMSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICL 333
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
G VY+ G GE LGH G N V + KQV
Sbjct: 334 DTAGKVYTVGRGEYGRLGH-----GDSNEEKRVPAILDLPPCKQV------------AAG 376
Query: 489 NAHTFALTESGKLYAFGAGDKGQLG 513
A ++A+T SG++YA+G G QLG
Sbjct: 377 QAVSYAVTNSGEIYAWGMGTSQQLG 401
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 28/346 (8%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A+AG H++ +T+KG VY+FG N G LG T+EE P + R IQ +AG T
Sbjct: 97 AVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDLLGRGIQLSAGDSHT 156
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+++D G+V+A+G + G+ + P +E L V++ A G L+ +
Sbjct: 157 AVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKP--IEMLPGETVIKIASGGDHLLCLTEK 214
Query: 270 GRVYTFSWGNDARLGHHTEPNDVE----------PHPLLGTLENIPVVQIAAGYCY---L 316
G +Y+ +LG E V ++ L + ++ Y
Sbjct: 215 GEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQY 274
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
++ A + ++Y+ G +LG ++ P ++ +++ +V AG HA +
Sbjct: 275 MSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMS-EDVKVTMVDAGQHHAICL 333
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVY 435
G+V T G G YG LGHG+ E K V A+ D+ VA G ++ V+ G++Y
Sbjct: 334 DTAGKVYTVGRGEYGRLGHGDSNEE---KRVPAILDLPPCKQVAAGQAVSYAVTNSGEIY 390
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
++G G S LG D V TPQL+T + +V+ +S
Sbjct: 391 AWGMGTSQQLGSGDDED--------VTTPQLITGKQLQTRKVIAVS 428
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 26/301 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG H+ +T +G V+++G+ G T + + +PI L G +I+ A+G
Sbjct: 148 QLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEMLPGETVIKIASGGDH 207
Query: 209 TMLISDAGQVYAFGKDSFGE---------AEYGVQGTKLVTSPQLVESL-----KNIFVV 254
+ +++ G++Y+ G G+ G +G + P ++ L K +
Sbjct: 208 LLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFD 267
Query: 255 QAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
G + + ++ G +Y + N +LG + N P + E++ V + AG
Sbjct: 268 DVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQ 327
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWH 372
+ + C + VY+VG G G+LGHG +EK I L+L P VAAG
Sbjct: 328 HHAI---CLDTAGKVYTVGRGEYGRLGHGDSNEEKRVPAI-----LDLPPCKQVAAGQAV 379
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVVSE 430
+ V G + WG G LG G++E + P+++ + L K I V+ G T +++
Sbjct: 380 SYAVTNSGEIYAWGMGTSQQLGSGDDEDVTTPQLITGKQLQTRKVIAVSGGGQHTVLLAT 439
Query: 431 D 431
D
Sbjct: 440 D 440
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 23/238 (9%)
Query: 293 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 352
+ P L +++ +V AG + + C + VY+ GC G LG + ++E L
Sbjct: 81 KSRPALVNIDDQKIVSAVAGGMHTV---CLTNKGEVYTFGCNDEGALGRNT-SEEGSETL 136
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-----GRYGCLGHGNEECESVPKVV 407
+ LL + + ++AG H AV+ +G+V WG G+ G G +E K +
Sbjct: 137 PSKVDLLG-RGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQE-----KPI 190
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGNRHA--NVLTP 464
+ L I +A+G ++E G++YS GC E LG A +G R +L P
Sbjct: 191 EMLPGETVIKIASGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKP 250
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTE--SGKLYAFGAGDKGQLGIELVNNQ 520
++ L+ +++ V + + +Y + E +G +YA+G + QLG + N+
Sbjct: 251 AIIRCLRHKSKKRV---VFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENK 305
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 157/345 (45%), Gaps = 32/345 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+IA+ +GV YS+GSN GQLG G T +RP I + +I+ GA T+ I
Sbjct: 505 GEFHTIALCEEGV-YSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAI 563
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+ +VY++G G+ G++ + +P+ ++ L + V+QAA G +AVL+ + V
Sbjct: 564 TSDYKVYSWGWGVHGQL--GLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYV 621
Query: 273 YTFSWGNDARLG---HHTE--PNDVEPHPL-------LGTLENIPVVQIAAGYC----YL 316
YTF +LG H+ + P V+ L G E I + + +C Y
Sbjct: 622 YTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYH 681
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 375
C + + Y G K+ ++ D H E Q P+ + G WH +
Sbjct: 682 QFYICAKAESSKY------GRKMASNTK-DLNHRFYPETLQFQLQHPITQIFCGNWHYII 734
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ +V TWG+ G LGH N+ +S P++V+AL I VA G + D ++
Sbjct: 735 LTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIM 794
Query: 436 SFGCGESASLG---HNAIADGQGNRHA--NVLTPQLVTSLKQVNE 475
++G + +G + + R + VL P LV L +++
Sbjct: 795 AWGRNDEGKIGIENEGNLGNSSSARQSIYCVLAPTLVHGLPSIDD 839
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+ G H++A+TS VYS+G GQLG + E + P+ I L ++IQAAAG +
Sbjct: 553 VVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHS 612
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+++ VY FG D +G+ G +++ PQLV+SL + + G F T +S +
Sbjct: 613 AVLTSQRYVYTFGADLYGQLGIGSHYKQVI--PQLVDSLTLDSIYLISCGPFETIAISED 670
Query: 270 GRVYTFSWGND------------ARLGHHTEPNDVE------PHPLLGTLENIPVVQIAA 311
+ F WG + ++ G N + P L L++ P+ QI
Sbjct: 671 QTI--FCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQH-PITQIFC 727
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + + L S VY+ G G+LGH ++ D+ PRL++ L+ + VA GA
Sbjct: 728 GNWHYIILT---SVNQVYTWGYNDCGQLGHYNKIDQSAPRLVK--ALIRRAIIGVAVGAE 782
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE 398
+ D + WG G +G NE
Sbjct: 783 FSVAFDADDNIMAWGRNDEGKIGIENE 809
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 170/391 (43%), Gaps = 47/391 (12%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTM 210
G H VT+ +Y++G G+ + P + +L QGI+++ A G T+
Sbjct: 453 GRNHIAFVTNNKELYTWGKECGGR--KDNVQNTCLPMRMENLHNQGIQVVSVACGEFHTI 510
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ + G VY++G + +G+ GV T+ P L+ + + +V G + T ++ +
Sbjct: 511 ALCEEG-VYSWGSNEYGQL--GVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDY 567
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+VY++ WG +LG + N + P + L++ V+Q AAGY + L Q VY+
Sbjct: 568 KVYSWGWGVHGQLGLKSVENQLTPKQI-DLLDSHKVIQAAAGYAHSAVLTSQR---YVYT 623
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG---- 386
G L G+LG GS + P+L++ L ++ +++ G + + +D + WG
Sbjct: 624 FGADLYGQLGIGSHYKQVIPQLVDSLTLDSI--YLISCGPFETIAISEDQTIFCWGRNYH 681
Query: 387 ------------WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+GR + P+ +Q + G++ +++ V
Sbjct: 682 QFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQV 741
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G + LGH D P+LV +L + ++ +++ + A
Sbjct: 742 YTWGYNDCGQLGHYNKIDQSA--------PRLVKAL--IRRAIIGVAVGAEF-----SVA 786
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQTERGN 525
+ A+G D+G++GIE N+ GN
Sbjct: 787 FDADDNIMAWGRNDEGKIGIE---NEGNLGN 814
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 150/328 (45%), Gaps = 38/328 (11%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAI 258
+ A G +++ ++Y +GK+ G + VQ T L P +E+L N I VV A
Sbjct: 449 RIACGRNHIAFVTNNKELYTWGKECGGRKD-NVQNTCL---PMRMENLHNQGIQVVSVAC 504
Query: 259 GNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
G F T L EG +SWG++ +LG P L+ + + +V + G +
Sbjct: 505 GEFHTIALCEEG---VYSWGSNEYGQLGVGDTRTRYRP-VLITHISSKQIVSVVCGAYHT 560
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 375
LA+ S VYS G G+ G+LG S ++ P+ Q LL+ V+ AAG H+AV
Sbjct: 561 LAIT---SDYKVYSWGWGVHGQLGLKSVENQLTPK---QIDLLDSHKVIQAAAGYAHSAV 614
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ V T+G YG LG G+ + +P++V +L ++ G + T +SED ++
Sbjct: 615 LTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIF 674
Query: 436 SFG--------CG--ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+G C ES+ G ++ + H P+ T Q+ + QI N
Sbjct: 675 CWGRNYHQFYICAKAESSKYGRKMASNTKDLNHR--FYPE--TLQFQLQHPITQIFCGN- 729
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
W H LT ++Y +G D GQLG
Sbjct: 730 --W--HYIILTSVNQVYTWGYNDCGQLG 753
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 288 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
+ + + + LL T + P +IA G ++ A + +Y+ G GG+ + T
Sbjct: 431 KSDSISSNDLLFT--STPRARIACGRNHI---AFVTNNKELYTWGKECGGRKDNVQNT-- 483
Query: 348 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
P +E +Q V VA G +H + ++G V +WG YG LG G+ P ++
Sbjct: 484 CLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLI 542
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++ + + V G Y T ++ D VYS+G G LG ++ N LTP+ +
Sbjct: 543 THISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVE--------NQLTPKQI 594
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
L + +V+Q + AH+ LT +Y FGA GQLGI
Sbjct: 595 DLLD--SHKVIQAAAGY-----AHSAVLTSQRYVYTFGADLYGQLGI 634
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA AG HS +TS+ VY+FG++ GQLG G+ ++ P+ + SL I + G
Sbjct: 604 QAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFE 663
Query: 209 TMLISDAGQVYAFGKDSF-----GEAEYGVQGTKLVTS---------PQLVESLKNIFVV 254
T+ IS+ ++ +G++ +AE G K+ ++ P+ ++ +
Sbjct: 664 TIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPIT 723
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
Q GN+ +L+ +VYT+ + + +LGH+ + + P L+ L ++ +A G
Sbjct: 724 QIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPR-LVKALIRRAIIGVAVGAE 782
Query: 315 YLLALACQPSGMA 327
+ +A + MA
Sbjct: 783 FSVAFDADDNIMA 795
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALND--VKAIHVATGD 422
+A G H A V + + TWG C G N + +P ++ L++ ++ + VA G+
Sbjct: 450 IACGRNHIAFVTNNKELYTWG---KECGGRKDNVQNTCLPMRMENLHNQGIQVVSVACGE 506
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+ T + E+G VYS+G E LG + D + R+ VL + S KQ+ +S+
Sbjct: 507 FHTIALCEEG-VYSWGSNEYGQLG---VGDTR-TRYRPVLITHI--SSKQI------VSV 553
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
Y HT A+T K+Y++G G GQLG++ V NQ P+++D+
Sbjct: 554 VCGAY---HTLAITSDYKVYSWGWGVHGQLGLKSVENQL---TPKQIDL 596
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H I +TS VY++G N GQLGH ++ PR +++L II A GA
Sbjct: 723 TQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAE 782
Query: 208 RTMLISDAGQVYAFGKD-----------SFGEAEYGVQGTKLVTSPQLVESLKNI 251
++ + A+G++ + G + Q V +P LV L +I
Sbjct: 783 FSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSSSARQSIYCVLAPTLVHGLPSI 837
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 163/326 (50%), Gaps = 33/326 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTM 210
+G H++ ++ G V+S GSN +G+LG G E + P+ + IIQ +AG +M
Sbjct: 54 SGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSM 113
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+SD G+++A+G +S G + + G L + +P+ V SL VQ A G T L+
Sbjct: 114 AVSDDGRLFAWGSNSHG--QLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGG 169
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
GRV+ + +D R+ H P +VE +IP+VQI+AG + +AL SG ++
Sbjct: 170 GRVFIWGQQSDGRIRH--SPAEVE------IFISIPIVQISAGNLFTMALTA--SG-TLF 218
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG + D +P + N+ VV V G H+ + +GRV + G
Sbjct: 219 AWGKNEEGQLGDFTNKDVVNPCAVP-----NINSVVAVECGDSHSIALTHEGRVFSCGSD 273
Query: 389 RYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+G LG G ++ + + + +A G T VV+ +G +++FG + LGH
Sbjct: 274 SFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGH 332
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQV 473
GN N +TP+++ S++ V
Sbjct: 333 -------GNTR-NQITPRVIDSVENV 350
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q AG HS+AV+ G ++++GSNS GQL G P+ + SL +Q A GA
Sbjct: 104 QISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLP--ETVQVACGAS 161
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T+ ++ G+V+ +G+ S G + SP VE +I +VQ + GN FT L+
Sbjct: 162 HTVSLNGGGRVFIWGQQSDGRIRH---------SPAEVEIFISIPIVQISAGNLFTMALT 212
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGM 326
G ++ + + +LG T + V P + NI VV + G + +AL +
Sbjct: 213 ASGTLFAWGKNEEGQLGDFTNKDVVNP----CAVPNINSVVAVECGDSHSIALTHEGR-- 266
Query: 327 AVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V+S G G+LG G +R+ + E +L +A G H VV +G++ T
Sbjct: 267 -VFSCGSDSFGQLGCGQPNRSQNCMRGITE---MLGSHVTRIACGRCHTIVVA-NGKMHT 321
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
+G G LGHGN + P+V+ ++ +V ++
Sbjct: 322 FGLNSNGQLGHGNTRNQITPRVIDSVENVASV 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 160/378 (42%), Gaps = 51/378 (13%)
Query: 166 VYSFGSNSSGQLGH--GTTEEEWR----PR-----PIRSLQGIRIIQAAAGAGRTMLISD 214
+Y FG GQLG + E + + PR P R G+ + A+G T+ +SD
Sbjct: 6 LYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQ-NGVIVKSIASGERHTLFLSD 64
Query: 215 AGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 273
G+V++ G + GE GV+ P + S + ++Q + G + +S +GR+
Sbjct: 65 DGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDGRL- 121
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVG 332
F+WG+++ G D+ + ++P VQ+A G + ++L G V+ G
Sbjct: 122 -FAWGSNSH-GQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLN---GGGRVFIWG 176
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G++ H P +E F +++ V ++AG + G + WG G
Sbjct: 177 QQSDGRIRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQ 227
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG + P V +N V A V GD + ++ +G V+S G LG
Sbjct: 228 LGDFTNKDVVNPCAVPNINSVVA--VECGDSHSIALTHEGRVFSCGSDSFGQLGC----- 280
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
GQ NR N + +T + + V +I+ HT + +GK++ FG GQL
Sbjct: 281 GQPNRSQNCMRG--ITEM--LGSHVTRIACG-----RCHTIVVA-NGKMHTFGLNSNGQL 330
Query: 513 GIELVNNQTERGNPERVD 530
G NQ P +D
Sbjct: 331 GHGNTRNQI---TPRVID 345
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 58/315 (18%)
Query: 217 QVYAFGKDSFGEAEYGVQ------GTKLVTSPQLV----ESLKNIFVVQAAIGNFFTAVL 266
Q+Y FG G+ + G + +++ P+LV + V A G T L
Sbjct: 5 QLYVFG--CAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFL 62
Query: 267 SREGRVYTFSWGNDARLGH---HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
S +G+V++ + LG + P + T + ++QI+AG + +A++
Sbjct: 63 SDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISST---VSIIQISAGRSHSMAVS--- 116
Query: 324 SGMAVYSVGCGLGGKLGH-----GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
+++ G G+L S T ++ P L E Q VA GA H +
Sbjct: 117 DDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQ--------VACGASHTVSLNG 168
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GRV WG G + H P V+ + + ++ G+ T ++ G ++++G
Sbjct: 169 GGRVFIWGQQSDGRIRHS-------PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWG 221
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
E LG D V+ P V ++ V V + +S H+ ALT
Sbjct: 222 KNEEGQLGDFTNKD--------VVNPCAVPNINSV----VAVECGDS-----HSIALTHE 264
Query: 499 GKLYAFGAGDKGQLG 513
G++++ G+ GQLG
Sbjct: 265 GRVFSCGSDSFGQLG 279
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 171 SNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEA 229
+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +++ +
Sbjct: 1 TNCCGCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 289
G LV + +L N V + A G++ + VL+ +G V+ + + N ++G +
Sbjct: 61 GNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
N + P + G L+N VV IA G + ++A +G VY G G+LG GS ++
Sbjct: 120 NQLIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPT 176
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
P I Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P V
Sbjct: 177 PCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 234
Query: 410 LND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
D + A H A +T+ ++ G VY +G C G+S +L H
Sbjct: 235 EKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVTLPH 275
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 16/243 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGAGRTM 210
+GP H + T++G V+++G N+ QLG+GTT P I + L ++ + A G+ ++
Sbjct: 36 SGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSL 94
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSRE 269
+++ G+V+A+G ++ G+ G +L+ P+ V L+N VV A G + +
Sbjct: 95 VLTSDGEVFAWGYNNSGQVGSGSTANQLI--PRRVTGCLQNKVVVNIACGQMCSMAVVNT 152
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G VY + + + +LG + N +P P + L+ I V ++A GY + L L + V
Sbjct: 153 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ---V 207
Query: 329 YSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
Y+ G G+LG G+++++ +P ++E+ +++ + A +A Q G V WG
Sbjct: 208 YAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIE---IAACHSAHTSAAKTQGGHVYMWG 264
Query: 387 WGR 389
R
Sbjct: 265 QCR 267
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQA 202
++ ++ G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ ++
Sbjct: 80 NKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNI 139
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G +M + + G+VY +G + G+ G G + +P + +L+ I V + A G
Sbjct: 140 ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVQRVACGYAH 197
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
T VL+ EG+VY + + +LG + N P P++ +E +++IAA
Sbjct: 198 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVV--VEKDRIIEIAA 244
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 49 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 107
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V G+VY +G + LG
Sbjct: 108 NNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 167
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + + V AHT LT+ G++YA+GA
Sbjct: 168 LGS--------SGNQPTPCRIAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 212
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 213 NSYGQLGTGNKSNQS 227
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ V+ +G N GQLG G +++ P+ I+SL GI +Q AAG
Sbjct: 2 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGA 61
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++ +G ++ +G++ FG+ G+ P L++SL+ +V G TA L+
Sbjct: 62 HSFVLTLSGAIFGWGRNKFGQL--GLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALT 119
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+EG V+TF G +LGH++ +++ P + + +I V QIA G + A PS
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGR 176
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+YS G G G+LG GS ++ K P
Sbjct: 177 IYSFGLGGNGQLGTGSTSNRKSP 199
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 26/225 (11%)
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV 365
VQ+A GY + LAL+ V+ G G+LG G + P+LI+ LL + +
Sbjct: 1 VQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKS--LLGIPFMQ 55
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
VAAG H+ V+ G + WG ++G LG +E P ++++L K +++ G+ T
Sbjct: 56 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHT 115
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
++++G V++FG G LGHN+ + R L +VT QI+
Sbjct: 116 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ 165
Query: 486 IYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 525
HT A SG++Y+FG G GQLG +N+ T +GN
Sbjct: 166 -----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 205
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
VQ A G + + LS+ V F WG + +LG + L+ +L IP +Q+AA
Sbjct: 1 VQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAA 58
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + L SG A++ G G+LG D P L++ + + V + G
Sbjct: 59 GGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYICCGED 113
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 430
H A + ++G V T+G G YG LGH + E P+ V L +A G +T+ V
Sbjct: 114 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS 173
Query: 431 DGDVYSFGCGESASLG 446
G +YSFG G + LG
Sbjct: 174 SGRIYSFGLGGNGQLG 189
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 55 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 114
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 115 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 172
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
GR+Y+F G + +LG + N P + G
Sbjct: 173 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 205
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 12/301 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H ++ G ++++G G+LGHG E P+ + +L I + G T+
Sbjct: 136 AGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIA 195
Query: 212 IS-DAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+S AG +Y +G + FG+ G G P+ V +V G AV+
Sbjct: 196 LSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSS 255
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G ++T+ G+ RLGH N +P L+ +L VV +A G + LAL ++
Sbjct: 256 GALFTWGRGDHGRLGHGDTENRYQP-TLVSSLYGHVVVAVALGGGHSLALT---KAGELF 311
Query: 330 SVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 387
S G G G+LGHGS ++ + P+ ++ F +++ ++ ++AG +H+ DG V WG
Sbjct: 312 SWGRGENGQLGHGSYQSQQLAPKQLQFF--VDMPKIIGISAGGYHSVAQLDDGSVYAWGM 369
Query: 388 GRYGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
YG LG G+ + ++P+ + ++ ++ G T ++ D +YS+GCG L
Sbjct: 370 SDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRL 429
Query: 446 G 446
G
Sbjct: 430 G 430
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 153/334 (45%), Gaps = 37/334 (11%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
RII AGA +IS +G+++ +G+ +G +G + + +++P+ V +L NI +
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEES--ISTPKQVVALANIPMKYVF 187
Query: 258 IGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
G T LS ++WGN+ +LG +D P E++ V G
Sbjct: 188 CGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLP-----ESVAV----PGAKR 238
Query: 316 LLAL-------ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
L+AL A S A+++ G G G+LGHG + P L+ L V VA
Sbjct: 239 LVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSS--LYGHVVVAVAL 296
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDV-KAIHVATGDYTTF 426
G H+ + + G + +WG G G LGHG+ + + + PK +Q D+ K I ++ G Y +
Sbjct: 297 GGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSV 356
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+DG VY++G + LG DG N +L P+ + R IS
Sbjct: 357 AQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGI--------RFKTISCGFQ- 407
Query: 487 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
HT ALT +Y++G G G+LG NQ
Sbjct: 408 ----HTVALTSDNTIYSWGCGLGGRLGTFNEKNQ 437
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 7/238 (2%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG + + S G ++++G G+LGHG TE ++P + SL G ++ A G G ++
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLA 303
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ AG+++++G+ G+ +G ++ + QL + ++ + G + + +G
Sbjct: 304 LTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGS 363
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VY + + LG + P + I I+ G+ + +AL S +YS
Sbjct: 364 VYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALT---SDNTIYS 420
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
GCGLGG+LG + ++ P + N QPVV +AG V+G+ V G
Sbjct: 421 WGCGLGGRLGTFNEKNQCAPIAC---NIPNYQPVVFSAGEISTIVIGKKNTVVATSSG 475
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 134/284 (47%), Gaps = 13/284 (4%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWR--PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
+Y++G+N GQLG G +++ P + R++ AGA R +I +G ++ +G+
Sbjct: 204 LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGR 263
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
G +G T+ P LV SL VV A+G + L++ G ++++ G + +L
Sbjct: 264 GDHGRLGHG--DTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQL 321
Query: 284 GHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
GH + + + P L ++ ++ I+AG + +A Q +VY+ G G LG G
Sbjct: 322 GHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVA---QLDDGSVYAWGMSDYGILGTG 378
Query: 343 SRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 400
D P+ I + + + ++ G H + D + +WG G G LG NE+
Sbjct: 379 DSDDGAINIPQRILMPRGIRFK--TISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436
Query: 401 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
+ P + + + + + + G+ +T V+ + V + G +++
Sbjct: 437 QCAP-IACNIPNYQPVVFSAGEISTIVIGKKNTVVATSSGLTST 479
>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1086
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + + G LI+ G+V+ +G S G+ + V V P++VES
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMD--VGMPKVVES 358
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLEN 303
L ++ + G + T L+ G +YT WG++ + T+ P+ L G L+
Sbjct: 359 LDDVHIKSVVCGEYQTCALTHSGELYT--WGDNKNGANLTDEMRTRSQWLPYKLFGPLDG 416
Query: 304 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
I + ++A G + +++L+ Q +++ G G G LGHGS HP+ + + L++
Sbjct: 417 ITISKVACGEWHTAIVSLSGQ-----LFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSV 471
Query: 362 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 410
+ V A G+WH A + G++ TWG G G LGH + E + VP V L
Sbjct: 472 KSV--ACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL 529
Query: 411 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
D I V+ G T ++ G VY+ G LG+ D
Sbjct: 530 VDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKD 571
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 12/343 (3%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ +T +G V+ +G S G+LGH + P+ + SL + I G +T +
Sbjct: 318 GRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCAL 377
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ +G++Y +G + G T+ P +L L I + + A G + TA++S G+
Sbjct: 378 THSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHTAIVSLSGQ 437
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA--------CQP 323
++T+ G LGH + + P + +L + V +A G + A+
Sbjct: 438 LFTYGDGTFGVLGHGSLQSVSHPKE-VASLRGLSVKSVACGSWHTAAIVDIIADRFKFNA 496
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
G +++ G G G+LGH + P + +L++ + V+ G + G+V
Sbjct: 497 VGGKLFTWGDGDKGRLGHSDMEKKLVPTCVA--KLVDYDFIRVSCGRMLTVALTNTGKVY 554
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
T G +G LG+ + +S+ V L + +++G Y V++ G+VY++G G +
Sbjct: 555 TMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVYTWGKGGNG 614
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
LG I D + L + V S+ + I L SI
Sbjct: 615 QLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICLHKSI 657
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P+L+ES + V ++G A++++ G V+ + G+ +LGH DV ++ +L
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVN-MDVGMPKVVESL 359
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL----IEQFQ 357
+++ + + G AL SG +Y+ G G + TDE R + F
Sbjct: 360 DDVHIKSVVCGEYQTCALT--HSG-ELYTWGDNKNG----ANLTDEMRTRSQWLPYKLFG 412
Query: 358 LLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L+ + VA G WH A+V G++ T+G G +G LGHG+ + S PK V +L +
Sbjct: 413 PLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVK 472
Query: 417 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
VA G + T + + G ++++G G+ LGH+ + L P
Sbjct: 473 SVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKK--------LVPT 524
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V L V+ +++S + T ALT +GK+Y G+ GQLG
Sbjct: 525 CVAKL--VDYDFIRVSCGRML-----TVALTNTGKVYTMGSSVHGQLG 565
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 334 GLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G+ +LG+ S + D P+L+E +L+++ + + G HAA++ + G V WG G G
Sbjct: 283 GMVQRLGNQSVMQVDALVPKLLESTAMLDVRSI--SLGRKHAALITKRGEVFCWGDGSRG 340
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LGH +PKVV++L+DV V G+Y T ++ G++Y++G
Sbjct: 341 KLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCALTHSGELYTWG------------- 387
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERV------VQISLTNSIYWNAHTFALTESGKLYAFG 505
N++ LT ++ T + + ++ + IS W HT ++ SG+L+ +G
Sbjct: 388 ---DNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEW--HTAIVSLSGQLFTYG 442
Query: 506 AGDKGQLG 513
G G LG
Sbjct: 443 DGTFGVLG 450
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S+ G H+ V+ G ++++G + G LGHG+ + P+ + SL+G+ + A G+
Sbjct: 420 SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479
Query: 208 RTMLISD-----------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T I D G+++ +G G + KLV P V L + ++
Sbjct: 480 HTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLV--PTCVAKLVDYDFIRV 537
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ G T L+ G+VYT +LG + + D + G L+ V +I++G ++
Sbjct: 538 SCGRMLTVALTNTGKVYTMGSSVHGQLG-NPQAKDKSITIVEGKLKEEFVKEISSGSYHV 596
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVAAGAW 371
L SG VY+ G G G+LG G+ D P +E + ++ + + AA
Sbjct: 597 AVLT---SGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICL 653
Query: 372 HAAVVGQDGRVCT 384
H ++ D C+
Sbjct: 654 HKSISVTDQSSCS 666
>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
Length = 910
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 145/299 (48%), Gaps = 32/299 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL------------QGIRII 200
G H+ VT +G ++++G S G+LGHG + +PR + SL +G+++
Sbjct: 268 GVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVA 327
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
G T L++ Q++ FG +FG +G + V P+ VESL + + A G
Sbjct: 328 SVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRTIAVACGV 385
Query: 261 FFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
+ TA + G+++T+ G+ RLGH + ++P + +E ++
Sbjct: 386 WHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE-YNFQKV 444
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G+ + L SG V ++G + G+LG+ ++D K P +E +LL +A G
Sbjct: 445 ACGHSLTVGLTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACG 499
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 427
A+H AV+ V TWG G G LGHG+ E P +V+ L D ++A G +YT +
Sbjct: 500 AYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 558
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 41/298 (13%)
Query: 239 VTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 295
V LV+ L++ V+ A G A+++R+G ++T+ + RLGH + ++P
Sbjct: 245 VICDNLVKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR 304
Query: 296 PLLGTLENIPV---------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 346
L+ +L V +Q+A+ C A + +++ G G G LGHG + +
Sbjct: 305 -LVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN 363
Query: 347 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGH 395
+PR +E L L+ + VA G WH A V + G++ TWG G LGH
Sbjct: 364 VAYPREVES--LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH 421
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G++E P V AL + VA G T ++ G V + G LG N +DG+
Sbjct: 422 GDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLG-NPQSDGK- 479
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P V K + E V +I+ Y H LT ++Y +G G G+LG
Sbjct: 480 -------LPCFVED-KLLGECVEEIAC--GAY---HVAVLTSRNEVYTWGKGANGRLG 524
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 37/305 (12%)
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+P+ S + + A G L++ G+++ +G++S G +GV + V P+LVESL
Sbjct: 252 KPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVESL 309
Query: 249 ------------KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
+ + V G + TA+++ +++TF G LGH + N P
Sbjct: 310 AFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPRE 369
Query: 297 LLGTLENIPVVQIAAGYCYLLAL--------ACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ +L + + +A G + A+ + S +++ G G +LGHG +
Sbjct: 370 V-ESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRL 428
Query: 349 HPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKV 406
P + N Q V H+ VG G+VCT G YG LG+ + + V
Sbjct: 429 KPTCVPALIEYNFQKVACG----HSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKLPCFV 484
Query: 407 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 466
L +A G Y V++ +VY++G G + LGH I D + TP L
Sbjct: 485 EDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRK--------TPTL 536
Query: 467 VTSLK 471
V +LK
Sbjct: 537 VETLK 541
>gi|294901417|ref|XP_002777367.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
50983]
gi|239884950|gb|EER09183.1| uvb-resistance protein uvr8, putative [Perkinsus marinus ATCC
50983]
Length = 359
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 162/372 (43%), Gaps = 47/372 (12%)
Query: 163 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G VY+FGS +SGQLGHG +E +P + SL IR++ A G T+ + G V+ G
Sbjct: 3 DGRVYTFGSGTSGQLGHGVLRDEPQPLLVSSLSRIRLVAVACGDRHTLFLGVTGLVFGTG 62
Query: 223 KDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+++FG + + +SP+ V+S +I + G + VL GRV F W
Sbjct: 63 RNTFG--QLACDDLRDFSSPRRIDVDSCGSI-PIDVRCGGDHSMVLLANGRVVAFGWNAF 119
Query: 281 ARLG---HH--TEPNDVEPHPLLGTLENIP-----VVQIAAGYCYLLALACQPSGMAVYS 330
+LG H T P P TL N P V I+ G+ + L LA SG VYS
Sbjct: 120 GQLGIGISHLGTTPVSAISSP---TLVNPPGPGVRFVSISCGFAHSLLLA--DSGR-VYS 173
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGR 389
G G G+LG+ R+ P LI + V+ G H+ V+ G G V +G G
Sbjct: 174 CGMGTHGQLGNDERSHCWVPTLIPTISRCTM----VSCGGHHSLVLCGPMGEVYAFGSGS 229
Query: 390 YGCLGHGNEECE-SVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G++ + S+P KV L V A+ G ++ + + +Y FG G LG
Sbjct: 230 TGKLGRGDDMGDTSIPVKVSGQLPPVAAV-CCGGAHSLVITRDKSALYGFGMGRRGQLG- 287
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
DG H P V + + HT A ES FG
Sbjct: 288 ----DGLRRSHPLPTGP-------------VAVGVKCIAGGGYHTLAALESRGFIVFGRS 330
Query: 508 DKGQLGIELVNN 519
+GQLG+ V +
Sbjct: 331 TRGQLGVGFVED 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 132/311 (42%), Gaps = 30/311 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISD 214
H++ + G+V+ G N+ GQL + PR I G I G +M++
Sbjct: 48 HTLFLGVTGLVFGTGRNTFGQLACDDLRDFSSPRRIDVDSCGSIPIDVRCGGDHSMVLLA 107
Query: 215 AGQVYAFGKDSFGEAEYGVQ--GT---KLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSR 268
G+V AFG ++FG+ G+ GT ++SP LV + V + G + +L+
Sbjct: 108 NGRVVAFGWNAFGQLGIGISHLGTTPVSAISSPTLVNPPGPGVRFVSISCGFAHSLLLAD 167
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV----QIAAGYCYLLALACQPS 324
GRVY+ G +LG ND H + TL IP + ++ G + L L C P
Sbjct: 168 SGRVYSCGMGTHGQLG-----NDERSHCWVPTL--IPTISRCTMVSCGGHHSLVL-CGPM 219
Query: 325 GMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQD-GR 381
G VY+ G G GKLG G D P + L PV V G H+ V+ +D
Sbjct: 220 G-EVYAFGSGSTGKLGRGDDMGDTSIPVKVSG----QLPPVAAVCCGGAHSLVITRDKSA 274
Query: 382 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
+ +G GR G LG G +P A+ VK I A G Y T E FG
Sbjct: 275 LYGFGMGRRGQLGDGLRRSHPLPTGPVAVG-VKCI--AGGGYHTLAALESRGFIVFGRST 331
Query: 442 SASLGHNAIAD 452
LG + D
Sbjct: 332 RGQLGVGFVED 342
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 31/263 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--------QGIRIIQAAAGAG 207
HS+ + + G V +FG N+ GQLG G + P S G+R + + G
Sbjct: 101 HSMVLLANGRVVAFGWNAFGQLGIGISHLGTTPVSAISSPTLVNPPGPGVRFVSISCGFA 160
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++L++D+G+VY+ G + G + G P L+ ++ +V G+ +
Sbjct: 161 HSLLLADSGRVYSCGMGTHG--QLGNDERSHCWVPTLIPTISRCTMVSCG-GHHSLVLCG 217
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G VY F G+ +LG + D P + G L PV + G + L + S
Sbjct: 218 PMGEVYAFGSGSTGKLGRGDDMGDTSIPVKVSGQLP--PVAAVCCGGAHSLVITRDKS-- 273
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGR 381
A+Y G G G+LG G R HP L PV V A G +H +
Sbjct: 274 ALYGFGMGRRGQLGDGLR--RSHP--------LPTGPVAVGVKCIAGGGYHTLAALESRG 323
Query: 382 VCTWGWGRYGCLGHGNEECESVP 404
+G G LG G E SVP
Sbjct: 324 FIVFGRSTRGQLGVGFVEDVSVP 346
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 167/372 (44%), Gaps = 33/372 (8%)
Query: 106 KRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGV 165
K IF +EAE Q ++Q C + G A + T
Sbjct: 6 KWPIFSLCSEAELQLVRQAC-----------VFGSA------------SNELLYTTVNDE 42
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L++ VV IA G + ++A +G V+ G G+LG GS
Sbjct: 162 SGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 K-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANV 461
VV + + I +T+ ++ G VY +G C G+S +L H + A
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336
Query: 462 LTPQLVTSLKQV 473
TP + L V
Sbjct: 337 ATPAVTWRLLSV 348
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L +++A G + V G+V+ +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ GN+ TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 161 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI-SDAGQVY 219
T V+ G+N SG LG G PR + L G +I + G+G ++I +D G+VY
Sbjct: 63 TENDEVFVLGTNCSGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVY 122
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G +++ + G LV + + +L N V++ A G+ + VL+ +G V+ + + N
Sbjct: 123 TWGHNAYNQLGNGTTNHGLVPT-HISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNN 181
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
++G + N P + G L+N IA G + ++A SG VY G G+L
Sbjct: 182 SGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQ--MCSMAVVESG-EVYVWGYNGNGQL 238
Query: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
G GS ++ P I Q + + +V G H V+ +G + WG YG LG GN+
Sbjct: 239 GLGSSGNQPTPCRIAALQGIRVHKIV--CGYAHTLVLTDEGHLYAWGANSYGQLGTGNKS 296
Query: 400 CESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
+S P V D V I +T+ ++ G +Y +G C G+S +L H
Sbjct: 297 NQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSVTLPH 347
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 14/242 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIR-IIQAAAGAGRTM 210
+GP H + T +G VY++G N+ QLG+GTT P I + G R +I+ A G+ ++
Sbjct: 108 SGP-HVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSL 166
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ G+V+A+G ++ G+ G + + ++ L+N A G + + G
Sbjct: 167 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-KVTGCLQNKIATTIACGQMCSMAVVESG 225
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
VY + + + +LG + N +P P + L+ I V +I GY + L L + +Y
Sbjct: 226 EVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGH---LY 280
Query: 330 SVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+ G G+LG G+++++ +P +E+ +++ + A +A Q G + WG
Sbjct: 281 AWGANSYGQLGTGNKSNQSYPTPVSVEKDRVIE---IAACHSAHTSAAKTQSGHIYMWGQ 337
Query: 388 GR 389
R
Sbjct: 338 CR 339
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAA 203
R+ + G HS+ +TS G V+++G N+SGQ+G G+T + PR + LQ A
Sbjct: 153 RKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIA 212
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G +M + ++G+VY +G + G+ G G + +P + +L+ I V + G T
Sbjct: 213 CGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQ--PTPCRIAALQGIRVHKIVCGYAHT 270
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
VL+ EG +Y + + +LG + N P P+ ++E V++IAA
Sbjct: 271 LVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPV--SVEKDRVIEIAA 316
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G +LG+G+ P I L N + + VA G+ H+ V+ DG V WG+
Sbjct: 121 VYTWGHNAYNQLGNGTTNHGLVPTHIST-NLGNRKVIEVACGSHHSLVLTSDGEVFAWGY 179
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P KV L + A +A G + V E G+VY +G + LG
Sbjct: 180 NNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLG 239
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +I + AHT LT+ G LYA+GA
Sbjct: 240 LGS--------SGNQPTPCRIAALQGI--RVHKI-----VCGYAHTLVLTDEGHLYAWGA 284
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 285 NSYGQLG---TGNKSNQSYPTPVSVE 307
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 142 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRII 200
C + + + IA G S+AV G VY +G N +GQLG G++ + P I +LQGIR+
Sbjct: 202 CLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVH 261
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 260
+ G T++++D G +YA+G +S+G+ G + + +P VE + + A
Sbjct: 262 KIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSVEK-DRVIEIAACHSA 320
Query: 261 FFTAVLSREGRVYTFSWG 278
+A ++ G +Y WG
Sbjct: 321 HTSAAKTQSGHIYM--WG 336
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 32/311 (10%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
+AG +S+A+ G ++++G N G LGH ++ E P +++L+ ++I+QAA G
Sbjct: 46 VAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHC 105
Query: 210 MLISDAGQVYAFGKDSFG----EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAIGNF 261
+ + D GQ YA+G + +G E E G+K+ + PQ + V Q A G
Sbjct: 106 LAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQ--RCAPQLRVRQVAAGGT 163
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLL 317
+ VL+ G V+T+ G P D++ P + G LEN+ + IA G + L
Sbjct: 164 HSVVLTHNGHVWTW--------GQPWPPGDIKQISTPVRVQG-LENVQL--IAVGAFHNL 212
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + V++ G G+LG G P ++ L L +AAG WH+ +
Sbjct: 213 ALLEEGE---VWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILAD--IAAGGWHSTALT 267
Query: 378 QDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
D V WG G +G LG G+++ VP+ V L V+ G + + DG ++S
Sbjct: 268 TDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFS 327
Query: 437 FGCGESASLGH 447
+G + LG+
Sbjct: 328 YGRADHGRLGY 338
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 42/385 (10%)
Query: 160 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL--QGIRIIQAAAGAGRTMLISDAGQ 217
+ S V ++GS GQLG G E++ I++L G R++ AG+ ++ I + GQ
Sbjct: 1 MESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
++ +G + G + + +K ++P V++L+N+ +VQAAIG + + +G+ Y +W
Sbjct: 61 LFTWGWNQRGTLGHPPE-SKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAY--AW 117
Query: 278 GNDARLGHHTEPNDVEP-HPLLGTLENIP--------VVQIAAGYCYLLALACQPSGMAV 328
G + EP E +L IP V Q+AAG + + L V
Sbjct: 118 GGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGH---V 174
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
++ G G P ++ + + L +A GA+H + ++G V WG
Sbjct: 175 WT----WGQPWPPGDIKQISTPVRVQGLENVQL----IAVGAFHNLALLEEGEVWAWGNN 226
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LG G+ + S P VQ L+ + +A G + + ++ D +VY++G GE LG
Sbjct: 227 EYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGF- 285
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
G+ ++ + PQ V L E + Q+S + H+ A T G+++++G D
Sbjct: 286 ------GDDKSSKMVPQKVHLL--AGETIAQVSCGGT-----HSVARTADGRIFSYGRAD 332
Query: 509 KGQLGIELVNNQTERGNPERVDIDL 533
G+LG + G+P V I +
Sbjct: 333 HGRLGY---GRKVTTGHPMEVPIGI 354
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 146 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
EN Q IA G H++A+ +G V+++G+N GQLG G T+ +P P++ L G+ + AA
Sbjct: 199 ENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAA 258
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G + ++ +VYA+G+ G +G + +K+V PQ V L + Q + G +
Sbjct: 259 GGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMV--PQKVHLLAGETIAQVSCGGTHS 316
Query: 264 AVLSREGRVYTFSWGNDARLGH 285
+ +GR++++ + RLG+
Sbjct: 317 VARTADGRIFSYGRADHGRLGY 338
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 32/243 (13%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL------QGIRIIQ- 201
Q AG HS+ +T G V+++G + W P I+ + QG+ +Q
Sbjct: 157 QVAAGGTHSVVLTHNGHVWTWG-------------QPWPPGDIKQISTPVRVQGLENVQL 203
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
A GA + + + G+V+A+G + +G+ G T+ + P V+ L + + A G +
Sbjct: 204 IAVGAFHNLALLEEGEVWAWGNNEYGQ--LGTGDTQPRSQPVPVQGLSGLILADIAAGGW 261
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+ L+ + VY + G RLG + + + L + Q++ G + +A
Sbjct: 262 HSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVA--- 318
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA---GAWHAAVVGQ 378
+ + ++S G G+LG+G + HP + + ++P AA G W +V
Sbjct: 319 RTADGRIFSYGRADHGRLGYGRKVTTGHPMEVP----IGIRPPKNAAENSGCWFVKLVAC 374
Query: 379 DGR 381
GR
Sbjct: 375 GGR 377
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N VV IA G + +A +G VY G G+LG G+
Sbjct: 162 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 53/323 (16%)
Query: 106 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 143
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 144 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---QLVESLKN 250
L ++I+ A G+ +++++ G+V+A+G ++ G+ G V P ++ L+N
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG----STVNQPIPRRVTGCLQN 180
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 309
VV A G + G VY + + + +LG N +P P + L+ I V ++
Sbjct: 181 KVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRV 238
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVA 367
A GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 239 ACGYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAA 291
Query: 368 AGAWH-AAVVGQDGRVCTWGWGR 389
+ H +A Q G V WG R
Sbjct: 292 CHSTHTSAAKTQGGHVYMWGQCR 314
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 251
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 18 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 74
Query: 252 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 132
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 133 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 188
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 189 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 249 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 297
Query: 489 NAHTFALTESGKLYAFG 505
+A A T+ G +Y +G
Sbjct: 298 SA---AKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 260 NSYGQLG---TGNKSNQSYPTPVTVE 282
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N VV IA G + +A +G VY G G+LG G+
Sbjct: 162 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 53/323 (16%)
Query: 106 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 143
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 144 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---QLVESLKN 250
L ++I+ A G+ +++++ G+V+A+G ++ G+ G V P ++ L+N
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG----STVNQPIPRRVTGCLQN 180
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 309
VV A G + G VY + + + +LG N +P P + L+ I V ++
Sbjct: 181 KVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRV 238
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVA 367
A GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 239 ACGYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAA 291
Query: 368 AGAWH-AAVVGQDGRVCTWGWGR 389
+ H +A Q G V WG R
Sbjct: 292 CHSTHTSAAKTQGGHVYMWGQCR 314
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 251
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 18 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 74
Query: 252 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 75 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 132
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 133 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 188
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 189 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 249 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 297
Query: 489 NAHTFALTESGKLYAFG 505
+A A T+ G +Y +G
Sbjct: 298 SA---AKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 260 NSYGQLG---TGNKSNQSYPTPVTVE 282
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 159/333 (47%), Gaps = 18/333 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ + I +LQG +++ +
Sbjct: 3217 QIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGS 3276
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G +M ++++G+V+++G +G+ +G + P+ +E+L+ ++Q A G +AV
Sbjct: 3277 DGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEIIQMACGFKHSAV 3334
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+S +G+++TF G+ RLG N P + LE V Q+ G + LA++ G
Sbjct: 3335 VSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSA--DG 3391
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+S G G GKLG G+ T + P+ ++ + ++ V G + + +DGRV T+
Sbjct: 3392 NTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKK--VCCGTQFSVALTKDGRVFTF 3449
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R + P+ V AL V G + ++ G+V+++G L
Sbjct: 3450 GQERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQL 3509
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
G I D R P LVT+L+ N R V
Sbjct: 3510 G---IGDTNARRE-----PCLVTALQGKNVRQV 3534
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 150/345 (43%), Gaps = 51/345 (14%)
Query: 155 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISD 214
GHS+A+T G V+S+G G+LGHG ++ + RPR I +LQG IIQ A G + ++S
Sbjct: 3278 GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSA 3337
Query: 215 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VY 273
G+++ FG +G G K + P+ V +L+ V Q G T +S +G V+
Sbjct: 3338 DGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395
Query: 274 TFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+F G+ +LG + P V+P L I V ++ G + +AL V
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDP------LCGIGVKKVCCGTQFSVALT---KDGRV 3446
Query: 329 YSVGCG-LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
++ G L G+ SR + P+ + + ++ VVV GA H+ + G V WG
Sbjct: 3447 FTFGQERLIGQPESRSR-NHNRPQQVPALEAFFVEDVVV--GAEHSLALTSTGEVWAWGS 3503
Query: 388 GRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G LG G+ P +V AL +V+ + + GD
Sbjct: 3504 NGDGQLGIGDTNARREPCLVTALQGKNVRQVWGSNGD----------------------- 3540
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G I D R P LVT L+ N R + +S W A
Sbjct: 3541 GQLGIGDTNARRE-----PCLVTDLQGKNVRQISAGRNHSGGWTA 3580
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 136/319 (42%), Gaps = 67/319 (21%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--- 311
Q G T V+ G V G+ RLG +D+ ++ L+ V Q+
Sbjct: 3217 QIICGQNCTFVIQANGTVQACGEGSYGRLGQGNS-DDLHQLTIISALQGFVVTQLVTSCG 3275
Query: 312 --GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
G+ ++A SG V+S G G GKLGHG+ ++ PR IE Q + + +A G
Sbjct: 3276 SDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEI--IQMACG 3328
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
H+AVV DG++ T+G G YG LG GN + +P+ V AL V G T VS
Sbjct: 3329 FKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVS 3388
Query: 430 EDGD-VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL-----KQV---------- 473
DG+ V+SFG G+ LG GN A TPQ V L K+V
Sbjct: 3389 ADGNTVWSFGDGDYGKLG-------LGNSTAKS-TPQRVDPLCGIGVKKVCCGTQFSVAL 3440
Query: 474 ----------NERVVQISLTNSIYWN--------------------AHTFALTESGKLYA 503
ER++ + S N H+ ALT +G+++A
Sbjct: 3441 TKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWA 3500
Query: 504 FGAGDKGQLGIELVNNQTE 522
+G+ GQLGI N + E
Sbjct: 3501 WGSNGDGQLGIGDTNARRE 3519
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 120/288 (41%), Gaps = 37/288 (12%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS V++ G +++FG+ G+LG G T + P + +L+G +
Sbjct: 3315 EALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMV 3374
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
Q G T+ +S D V++FG +G+ G K ++PQ V+ L I V +
Sbjct: 3375 GQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAK--STPQRVDPLCGIGVKKVCC 3432
Query: 259 GNFFTAVLSREGRVYTFSWGN-----DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
G F+ L+++GRV+TF ++R +H P V LE V + G
Sbjct: 3433 GTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRPQQVP------ALEAFFVEDVVVGA 3486
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LAL S V++ G G+LG G + P L+ Q N++ V
Sbjct: 3487 EHSLALT---STGEVWAWGSNGDGQLGIGDTNARREPCLVTALQGKNVRQV--------- 3534
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
WG G LG G+ P +V L ++ G
Sbjct: 3535 -----------WGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISAG 3571
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG GR+G L + P V + + +A + G TFV+ +G V + G G
Sbjct: 3188 WGGGRHGQLAETGRSLLT-PTVTPSFS--QAQQIICGQNCTFVIQANGTVQACGEGSYGR 3244
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG QGN ++ ++++L+ V L S + H+ ALTESG+++++
Sbjct: 3245 LG-------QGNSD-DLHQLTIISALQGF----VVTQLVTSCGSDGHSMALTESGEVFSW 3292
Query: 505 GAGDKGQLG 513
G GD G+LG
Sbjct: 3293 GDGDYGKLG 3301
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 43/368 (11%)
Query: 186 WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 245
+RP+ + SLQ I A G G T+ ++ GQVY+ G +G + G+ K V L+
Sbjct: 21 YRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYG--QLGLGSLKEVEGITLI 78
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--EN 303
+S+ V+ A G+ + ++ +G +Y+ +G LG T +E L+ +L E
Sbjct: 79 DSIPEK-VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREE 137
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS--------------RTDEKH 349
++++AAG+ + +AL+ SG VYS G G LGHG R E
Sbjct: 138 EKIIKVAAGHGFSIALS--ESG-KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETS 194
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
PRLI + ++ ++ G+ HA + ++G WG GRY C NE P+ +
Sbjct: 195 PRLIRALEKEQME--YISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L + +G T +++ G V+++G L G G + + P++V
Sbjct: 253 LPGPWK-QIVSGGAHTLGLTKGGQVWAWGVNHFGCL-------GVGEQRTSPGEPRIVEK 304
Query: 470 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-------ELVNNQTE 522
L Q + +Q + + A+ G +Y++G G G LG E V Q E
Sbjct: 305 LLQQAKEPIQWIAAGWFF----SMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNE 360
Query: 523 RGNPERVD 530
+G P +VD
Sbjct: 361 QGEPLQVD 368
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 27/313 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G G ++ VT +G VYS G GQLG G+ +E I S+ ++I AAG ++ +
Sbjct: 40 GQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITLIDSIP-EKVITCAAGDRHSLFV 98
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREG 270
++ G +Y+ G GE G ++ T PQLVESL + +++ A G+ F+ LS G
Sbjct: 99 TEQGHLYSCGYGKRGELGLGTISRRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESG 157
Query: 271 RVYTFSWGNDARLGHHTEP------------NDVEPHP-LLGTLENIPVVQIAAGYCYLL 317
+VY+F ND LGH P ++E P L+ LE + I+ G +
Sbjct: 158 KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGH-- 215
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A A G+A + GCG + + + P+ + F L +V+ GA H +
Sbjct: 216 AFAINKEGVA-FGWGCGRYHCFATDNEVNWEQPQAL--FHLPGPWKQIVSGGA-HTLGLT 271
Query: 378 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQAL--NDVKAIH-VATGDYTTFVVSEDGD 433
+ G+V WG +GCLG G + P++V+ L + I +A G + + V +G
Sbjct: 272 KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGY 331
Query: 434 VYSFGCGESASLG 446
VYS+G G + +LG
Sbjct: 332 VYSWGRGHAGALG 344
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSL--QGIRIIQAAAGAGR 208
AG HS+ VT +G +YS G G+LG GT P+ + SL + +II+ AAG G
Sbjct: 90 AGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGF 149
Query: 209 TMLISDAGQVYAFGKDSFGEAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQA 256
++ +S++G+VY+FG + G +G V G + TSP+L+ +L+ +
Sbjct: 150 SIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYI 209
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
+ G+ +++EG + + G E N +P L P QI +G +
Sbjct: 210 SCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHT 267
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAA 374
L L G V++ G G LG G RT PR++E+ +P+ +AAG + +
Sbjct: 268 LGLT---KGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSM 324
Query: 375 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
V +G V +WG G G LG G EE + P +Q
Sbjct: 325 AVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQ 358
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 44/321 (13%)
Query: 228 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 287
E E V G V P++V SL+N + A G FT ++++G+VY+ G +LG +
Sbjct: 9 EYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGS 68
Query: 288 EPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--S 343
+VE L +++IP V+ AAG + L + Q +YS G G G+LG G S
Sbjct: 69 -LKEVEGITL---IDSIPEKVITCAAGDRHSLFVTEQGH---LYSCGYGKRGELGLGTIS 121
Query: 344 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG------- 396
R E P+L+E + + VAAG + + + G+V ++G G LGHG
Sbjct: 122 RRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIF 180
Query: 397 -------NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+ E+ P++++AL + +++ G F ++++G + +GCG H
Sbjct: 181 LWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY----HCF 236
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
D + N PQ + L +++V AHT LT+ G+++A+G
Sbjct: 237 ATDNE----VNWEQPQALFHLPGPWKQIVSG--------GAHTLGLTKGGQVWAWGVNHF 284
Query: 510 GQLGIELVNNQTERGNPERVD 530
G LG+ +T G P V+
Sbjct: 285 GCLGVG--EQRTSPGEPRIVE 303
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 109/258 (42%), Gaps = 29/258 (11%)
Query: 140 EACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT--------------E 183
E+ R E + AG G SIA++ G VYSFGS + G LGHG
Sbjct: 131 ESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRN 190
Query: 184 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
E PR IR+L+ ++ + G+G I+ G + +G + + PQ
Sbjct: 191 METSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY--HCFATDNEVNWEQPQ 248
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGT 300
+ L + Q G T L++ G+V+ + + LG T P EP +
Sbjct: 249 ALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPG--EPRIVEKL 305
Query: 301 LENI--PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
L+ P+ IAAG+ + +A+ + VYS G G G LG G D+ P I+ Q
Sbjct: 306 LQQAKEPIQWIAAGWFFSMAVDSEGY---VYSWGRGHAGALGTGEEEDKWEPVAIQNEQG 362
Query: 359 LNLQPVVVAAGAWHAAVV 376
LQ + AG +A V
Sbjct: 363 EPLQVDRIYAGFNYAIAV 380
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG--IRIIQAAAGAGRT 209
AG S+AV S+G VYS+G +G LG G E++W P I++ QG +++ + AG
Sbjct: 318 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 377
Query: 210 MLISD 214
+ + D
Sbjct: 378 IAVKD 382
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 157/373 (42%), Gaps = 34/373 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGA 206
SQA G HS AV S G +Y++G NS GQLG T ++ + P + G+ + +AG
Sbjct: 711 SQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGY 770
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
G ++ ++ G +Y++G +S G+ V P VE+ I VQA+ G L
Sbjct: 771 GFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVAL 830
Query: 267 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQP 323
S +G +YT WG+++ +LG N+ P T ++ ++AG + +A+ Q
Sbjct: 831 SSDGNIYT--WGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQG 888
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G+LG S T + + + +AG H+ V DG +
Sbjct: 889 D---VYTWGDNTHGELGR-STTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIY 944
Query: 384 TWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
TWG G LG N P V + G + + DG +Y++G
Sbjct: 945 TWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGK 1004
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
S G R V TP I+ T + ++ AL G LY
Sbjct: 1005 TSAG----------RPNKVDTP-------------AGITFTQASAGASYCLALGSDGNLY 1041
Query: 503 AFGAGDKGQLGIE 515
++G KGQLG +
Sbjct: 1042 SWGDNAKGQLGRD 1054
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 159/393 (40%), Gaps = 57/393 (14%)
Query: 143 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQ 201
+ E SQAIA S G +Y +G N GT E+E R P + G+ Q
Sbjct: 175 AKEEGSQAIA---------SDGNLYRWGDN---NYKLGTPEDEKRTPSLVNPPTGVHFTQ 222
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT------KLVTSPQLVESLKNIFVVQ 255
+ G + I G +Y++G ++ GE T ++ P+LV + Q
Sbjct: 223 VSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQ 282
Query: 256 AAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN--DVEPHPLLGTLENIP-----V 306
A G + + L +G +Y SWG + LG T DV+P + N+P +
Sbjct: 283 ACAGKWHSLALGSDGNLY--SWGENKYGELGRDTGSAIYDVKPGKV-----NLPKGITKI 335
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQP 363
QI+AG Y +AL S +YS G +LG G ++ PR + + +
Sbjct: 336 TQISAGTFYSMALD---SDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVK-KF 391
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC--ESVP-KVVQALNDVKAIHVAT 420
+ AG W + DG + +WGW YG LG + P KV K V+
Sbjct: 392 TWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSA 451
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
+ + DG++YS+G + LG + + + V TP V +V+
Sbjct: 452 EHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQFTEVSAGY--- 508
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+H+ A+ G LY++G G+LG
Sbjct: 509 ---------SHSLAIGSDGNLYSWGQNKYGELG 532
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 30/290 (10%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH--GTTEEEWRPRPIRSLQGI-RIIQAAA 204
+QA AG HS+A+ S G +YS+G N G+LG G+ + +P + +GI +I Q +A
Sbjct: 281 TQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISA 340
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQ---LVESLKNIFVVQAAIGN 260
G +M + G +Y++G +++ E G SP+ + +K ++A G
Sbjct: 341 GTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKA--GE 398
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
+ + S +G +Y++ W +LG +T P D P + +++A + + LA
Sbjct: 399 WTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLA 458
Query: 319 LACQPSGMAVYSVG---CGLGGKLGHGSRTDEK-----HPRLIEQFQLLNLQPVVVAAGA 370
L S +YS G C G+ ++ D K P + QF V+AG
Sbjct: 459 LG---SDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQF-------TEVSAGY 508
Query: 371 WHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVA 419
H+ +G DG + +WG +YG LG + +S P +V D K + V+
Sbjct: 509 SHSLAIGSDGNLYSWGQNKYGELGRPTSGKYDSSPGMVAFPEDPKPVDVS 558
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 142/352 (40%), Gaps = 46/352 (13%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P P R GIRI QA G + + G +Y +G +S G+ K + P E+
Sbjct: 702 PPPAR---GIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT-ADKPDSHPSKAEA 757
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDV--EPHPLLGTLEN 303
+ V + G F+ L+ +G +Y SWG+++R LG N+ PH +
Sbjct: 758 PAGVTFVHVSAGYGFSVALASDGSLY--SWGDNSRGQLGRTVTSNNPANRPHKVEAPA-G 814
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I VQ +AG +++AL+ S +Y+ G G+LG ++ + + ++
Sbjct: 815 ITFVQASAGGSHVVALS---SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTF 871
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA----IHVA 419
V+AG H V G V TWG +G LG S P D A +
Sbjct: 872 TSVSAGQGHTVAVDTQGDVYTWGDNTHGELG---RSTTSTPADKPGKADTPAGITFTQAS 928
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G+ + VS+DG +Y++G + LG + ++ TP VT
Sbjct: 929 AGESHSVAVSDDGSIYTWGDTANGRLGRDTNIT-PADKPGKADTPAGVT----------- 976
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
T + H+ AL G LY +G D G+ T G P +VD
Sbjct: 977 --FTQASAGGKHSIALGSDGSLYTWG--DSGK---------TSAGRPNKVDT 1015
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 31/280 (11%)
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 267 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 319
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR---SIKKVSSSKGSDGH----TL 471
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 438
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
G++ LGH G NR V P+++ +L+ + R V
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKV 619
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 18/304 (5%)
Query: 140 EACCR--RENSQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 192
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 193 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
S + I+ AG T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIE--AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 253 VVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 311
V ++ G + T + EG V+++ G+ +LGH P + G L+ VV ++A
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
GY + A+ +Y+ G G G+LGHG P L++ + V+ G+
Sbjct: 519 GYRHSAAVT---EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSS 571
Query: 372 HAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + +DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 431 DGDV 434
G V
Sbjct: 632 TGQV 635
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 26/252 (10%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++S VY + + +L T+ ++P L + + ++ A YC + +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPK-LAPSFSDAQTIE-AGQYCTFVI----ST 420
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVC 383
+V + G G G+LG G ++ + + +++ V + G+ H +G V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
+WG G YG LGHGN + PK++Q L + V+ G + V+EDG++Y++G G+
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-L 501
LGH G N N+ P LV + V E +S +S HT AL++ G+ +
Sbjct: 541 GRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSKDGRTV 583
Query: 502 YAFGAGDKGQLG 513
++FG GD G+LG
Sbjct: 584 WSFGGGDNGKLG 595
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 24/302 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT G +Y FGSN+ GQLG +P +++L+ +++ A+ G T+L
Sbjct: 45 GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 271
++ G++Y+ G +S E + G+ T TS Q + + + Q + G+ +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGK 162
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSG 325
+ F WG+++ +LG +E + T + I P+ I+ GY Y A Q
Sbjct: 163 L--FMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGY-YHSAFVTQDG- 211
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+Y+ G GKLG S +KH + ++ L+ + +V+ G H V + V T+
Sbjct: 212 -ELYTFGEPENGKLGLPSDKLKKHKK-PQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTF 268
Query: 386 GWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G G++G LGHG E+ +PK V L ++V G+ T V+++ G +Y+FG G
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGK 328
Query: 445 LG 446
LG
Sbjct: 329 LG 330
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 22/256 (8%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 208
A G H++ T +G +YS G NS GQLG G T + I +I Q +AG+
Sbjct: 94 ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNT 153
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G+++ +G +S E + G++ + ++PQ ++ K I + + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ 209
Query: 269 EGRVYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+G +YTF + +LG P+D +P + G + +V + G + +A+ +
Sbjct: 210 DGELYTFGEPENGKLGL---PSDKLKKHKKPQRVSGLSGKVKIV--SCGGEHTIAVTEK- 263
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
VY+ G G G+LGHG+ E P+ ++ + + V G H AV+ G +
Sbjct: 264 ---EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLL 318
Query: 383 CTWGWGRYGCLGHGNE 398
T+G GR+G LG G E
Sbjct: 319 YTFGDGRHGKLGLGEE 334
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 29/324 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L+ R + G T+L++ G++Y FG +++G+ G++ ++ P V++LK+ V
Sbjct: 34 LKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQ--LGLEAGSAISKPTCVKALKSEKV 91
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V A+ G T + + +G++Y+ ++ +LG + + Q++AG
Sbjct: 92 VFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGS 151
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
AL ++ G G+LG P+ I+ + ++ ++ G +H+
Sbjct: 152 NTSAALTVD---GKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISW----ISCGYYHS 204
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 431
A V QDG + T+G G LG +++ + P+ V L+ I G++T V +
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT--E 262
Query: 432 GDVYSFGCGESASLGHNA-IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+VY+FG G+ LGH I + Q + +VLT + + +
Sbjct: 263 KEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYV---------------TCGEN 307
Query: 491 HTFALTESGKLYAFGAGDKGQLGI 514
HT +T+ G LY FG G G+LG+
Sbjct: 308 HTAVITDKGLLYTFGDGRHGKLGL 331
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F L N +P ++ G H +V +G++ +G +G LG S P V+AL K
Sbjct: 31 KFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK 90
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ + G T + +E G +YS G LG + D G TS ++++
Sbjct: 91 VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLG---LGDTSGR-----------TSFQEIS 136
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
Q + + + ALT GKL+ +G +GQLG+E + P+++DI
Sbjct: 137 FFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLE---KEAIYSTPQKIDI 190
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG S A+T G ++ +G NS GQL G +E P + G I + G
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQL--GLEKEAIYSTPQKIDIGKPISWISCGYYH 203
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G++Y FG+ G+ K PQ V L + + G AV +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK 263
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
E VYTF G +LGH T + + + L ++ + G + + + G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK--GL-L 318
Query: 329 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
Y+ G G GKLG G T++ P L F +Q VA G H V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQS--VACGGCHMLV 365
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 24/302 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT G +Y FGSN+ GQLG +P +++L+ +++ A+ G T+L
Sbjct: 45 GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 271
++ G++Y+ G +S E + G+ T TS Q + + + Q + G+ +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGK 162
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSG 325
+ F WG+++ +LG +E + T + I P+ I+ GY Y A Q
Sbjct: 163 L--FMWGDNSEGQLG-------LEKEAIYSTPQKIDIGKPISWISCGY-YHSAFVTQDG- 211
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+Y+ G GKLG S +KH + ++ L+ + +V+ G H V + V T+
Sbjct: 212 -ELYTFGEPENGKLGLPSDKLKKHKK-PQRVSGLSGKVKIVSCGGEHTIAVTEK-EVYTF 268
Query: 386 GWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G G++G LGHG E+ +PK V L ++V G+ T V+++ G +Y+FG G
Sbjct: 269 GLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGK 328
Query: 445 LG 446
LG
Sbjct: 329 LG 330
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 22/256 (8%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 208
A G H++ T +G +YS G NS GQLG G T + I +I Q +AG+
Sbjct: 94 ASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNT 153
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G+++ +G +S E + G++ + ++PQ ++ K I + + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ 209
Query: 269 EGRVYTFSWGNDARLGHHTEPND-----VEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
+G +YTF + +LG P+D +P + G + +V + G + +A+ +
Sbjct: 210 DGELYTFGEPENGKLGL---PSDKLKKHKKPQRVSGLSGKVKIV--SCGGEHTIAVTEK- 263
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
VY+ G G G+LGHG+ E P+ ++ + + V G H AV+ G +
Sbjct: 264 ---EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLL 318
Query: 383 CTWGWGRYGCLGHGNE 398
T+G GR+G LG G E
Sbjct: 319 YTFGDGRHGKLGLGEE 334
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 147/324 (45%), Gaps = 29/324 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L+ + + G T+L++ G++Y FG +++G+ G++ ++ P V++LK+ V
Sbjct: 34 LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQ--LGLEAGSAISKPTCVKALKSEKV 91
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V A+ G T + + +G++Y+ ++ +LG + + Q++AG
Sbjct: 92 VFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGS 151
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
AL ++ G G+LG P+ I+ + ++ ++ G +H+
Sbjct: 152 NTSAALTVD---GKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISW----ISCGYYHS 204
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 431
A V QDG + T+G G LG +++ + P+ V L+ I G++T V +
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT--E 262
Query: 432 GDVYSFGCGESASLGHNA-IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
+VY+FG G+ LGH I + Q + +VLT + + +
Sbjct: 263 KEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYV---------------TCGEN 307
Query: 491 HTFALTESGKLYAFGAGDKGQLGI 514
HT +T+ G LY FG G G+LG+
Sbjct: 308 HTAVITDKGLLYTFGDGRHGKLGL 331
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F L N +P ++ G H +V +G++ +G +G LG S P V+AL K
Sbjct: 31 KFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEK 90
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ + G T + +E G +YS G LG + D G TS ++++
Sbjct: 91 VVFASCGRNHTLLYTEQGKLYSSGGNSEGQLG---LGDTSGR-----------TSFQEIS 136
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
Q + + + ALT GKL+ +G +GQLG+E + P+++DI
Sbjct: 137 FFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLE---KEAIYSTPQKIDI 190
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG S A+T G ++ +G NS GQL G +E P + G I + G
Sbjct: 146 QLSAGSNTSAALTVDGKLFMWGDNSEGQL--GLEKEAIYSTPQKIDIGKPISWISCGYYH 203
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G++Y FG+ G+ K PQ V L + + G AV +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK 263
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
E VYTF G +LGH T + + + L ++ + G + + + G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK--GL-L 318
Query: 329 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
Y+ G G GKLG G T++ P L F +Q VA G H V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQS--VACGGCHMLV 365
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 41/348 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + S + + A G +++ G+VY +G+ G G + ++SP++V+S
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDISSPKIVDS 352
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLEN 303
L +I V + A G + T L+ G VYT WG D+ + + H +E
Sbjct: 353 LSDIRVKKVACGEYHTCALTDSGDVYT--WGKDS-CSDLVDEGRIRSQWLTHKFSLPVEG 409
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
I + IA G + ++ S +++ G G G LGHG+ P+ +E + L ++
Sbjct: 410 ISISSIACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRS 466
Query: 364 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V A G WH A + + G++ TWG G LGH + + VP V L D
Sbjct: 467 V--ACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVD 524
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ V+ G T ++ G V++ G + LG+ + D A V+ LKQ
Sbjct: 525 YDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD-----RAVVVEGM----LKQ 575
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
E V IS + H LT SG +Y +G G+ G+LG+ N+
Sbjct: 576 --EYVKMISCG-----SYHVAVLTSSGSVYTWGKGENGELGLGDTENR 616
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 139/300 (46%), Gaps = 40/300 (13%)
Query: 230 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 289
E VQ + P+L+ES + V A+G A+++++G VY + G RLG +
Sbjct: 283 ERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDM 342
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
D+ ++ +L +I V ++A G + AL SG VY+ GK DE
Sbjct: 343 -DISSPKIVDSLSDIRVKKVACGEYHTCALT--DSG-DVYT-----WGKDSCSDLVDEGR 393
Query: 350 PR---LIEQFQL--LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
R L +F L + +A G WH A+V GR+ T+G G +G LGHGN S P
Sbjct: 394 IRSQWLTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSP 453
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADG 453
K V++L + VA G + T + E G ++++G + LGH AD
Sbjct: 454 KEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGH---AD- 509
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ N L P V+ L V+ VQ+S + T ALT GK++A G+ GQLG
Sbjct: 510 ----NVNKLVPTCVSQL--VDYDFVQVSCGRMM-----TLALTNMGKVFAMGSAKYGQLG 558
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQL-GHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRTM 210
G H+ A+T G VY++G +S L G +W ++GI I A G T
Sbjct: 364 GEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTA 423
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL---- 266
++S G+++ +G +FG +G + +SP+ VESLK + V A G + TA +
Sbjct: 424 IVSSCGRLFTYGDGTFGVLGHGNYHS--FSSPKEVESLKGLCVRSVACGTWHTAAIIEVS 481
Query: 267 -------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ G+++T+ ++ RLGH N + P + L + VQ++ G LAL
Sbjct: 482 AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLVDYDFVQVSCGRMMTLAL 540
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQ 378
+ V+++G G+LG+ D R + +L + V +++ G++H AV+
Sbjct: 541 T---NMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLTS 593
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G V TWG G G LG G+ E P V+AL D + + G T +
Sbjct: 594 SGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAI 643
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 25/253 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ V+S G ++++G + G LGHG P+ + SL+G+ + A G
Sbjct: 413 SSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTW 472
Query: 208 RTMLI-----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T I + G+++ +G G + KLV P V L + VQ
Sbjct: 473 HTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLV--PTCVSQLVDYDFVQV 530
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ G T L+ G+V+ +LG+ H + V + G L+ V I+ G +
Sbjct: 531 SCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV---VVEGMLKQEYVKMISCGSYH 587
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-----QFQLLNLQPVVVAAGA 370
+ L S +VY+ G G G+LG G + P +E Q + P A
Sbjct: 588 VAVLT---SSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAIC 644
Query: 371 WHAAVVGQDGRVC 383
H + D C
Sbjct: 645 LHKPISISDQSSC 657
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 39/298 (13%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKE-VPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 387 WGRYGCLGHGNEECESVPKVVQALN---------------DVKAIHVATGDYTTFVVS 429
HG + +S P +AL DV+ H+ G Y FV +
Sbjct: 314 --------HGPSD-KSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
I+++ GD T V+ +DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNP 526
+ N + P
Sbjct: 215 LSGRNVPVQSNKP 227
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L + GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVISFGHG 315
>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
Length = 464
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 151 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 96 VSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNH 155
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ +++ G VYAFG++ G+ G Q + + Q++ + + I + A G F+ ++
Sbjct: 156 TLALTETGSVYAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPI--TKMACGAEFSMIMDC 213
Query: 269 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 305
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 214 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 273
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 274 VRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 330
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 331 IYAGYTCSFAVSETGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 383
Query: 426 FVVSEDGDVYSFG 438
+V+ D S+G
Sbjct: 384 IIVAADESTISWG 396
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G VY+FG N GQLG G + + P P + + G I + A GA
Sbjct: 149 AACGRNHTLALTETGSVYAFGENKMGQLGLG-NQTDAVPSPTQIMYNGQPITKMACGAEF 207
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 208 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 266
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 267 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 324
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY A++ + G+ + + SR +P+ ++ ++
Sbjct: 325 GRGAAQIYAGYTCSFAVS-ETGGLFFWGA--------TNTSRESTMYPKAVQDLCGWKIR 375
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 376 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 432
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 433 MGYAHSLVIARD 444
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 81 PH-RYGCLSGVQVRSVVSGPCAAHSLLITAEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 138
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E +L + +V+AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 139 E---VLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQT-DAVPSPTQIMYN 194
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 195 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 254
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 255 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 305
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 134/330 (40%), Gaps = 67/330 (20%)
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
GR + G++ +G YG VQ +V+ P SL
Sbjct: 60 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPCAAHSL-------------- 105
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL
Sbjct: 106 --LITAEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTET 162
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
S VY+ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 163 GS---VYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 215
Query: 381 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 416
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 216 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 275
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 276 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 327
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E+G L+ +GA
Sbjct: 328 AAQIYAGYTC-----SFAVSETGGLFFWGA 352
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 79 WGPHRYGCL--------SGVQVRSVVSGPCAAH-------SLLITAEGKLWSWGRNEKGQ 123
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G +YAF
Sbjct: 124 LGH-----GDTKR---VEAPKLIEVLG--SEAIVLAACGRN-----HTLALTETGSVYAF 168
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 169 GENKMGQLGL---GNQTD 183
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 326 RGAAQIYAGYTCSFAVSETGGLFFWGATNT------SRESTMYPKAVQDLCGWKIRSLAC 379
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 380 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYAHSL 439
Query: 265 VLSRE 269
V++R+
Sbjct: 440 VIARD 444
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 41/366 (11%)
Query: 174 SGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 233
+G + TTE+ P+ + S + A G +L++ G+++++G+ G+ +G+
Sbjct: 264 TGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGL 323
Query: 234 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEP 289
+ V P+ + S++ + A G+F T +++ G +Y SWG+ LGH E
Sbjct: 324 ETD--VQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNES 379
Query: 290 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 349
+ P + G L+ + V +A G + +A S +++ G G G LGHG R
Sbjct: 380 SCWIPKRVTGALQGLYVSYVACGPWHTAVVA---SSGQLFTFGDGSFGALGHGDRRSTSV 436
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHG 396
PR ++ L L VA G WH A + G+V TWG G G LGHG
Sbjct: 437 PREVKI--LSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHG 494
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ + + +P+ V +L++ VA G T ++ G VY+ G LG+ +GN
Sbjct: 495 DNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGN---PTAKGN 551
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
A +V +V+ S+ + H LT ++Y +G G GQLG
Sbjct: 552 FPA------------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGT 599
Query: 517 VNNQTE 522
+ N+ E
Sbjct: 600 IENKRE 605
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 24/292 (8%)
Query: 153 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
G H+ A+T G +YS+G +++ LGHG W P+ + +LQG+ + A G T
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHT 406
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL--- 266
+++ +GQ++ FG SFG +G + + V P+ V+ L + V + A G + TA L
Sbjct: 407 AVVASSGQLFTFGDGSFGALGHGDRRSTSV--PREVKILSGLIVTKVACGVWHTAALVEV 464
Query: 267 ----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
S G+V+T+ G +LGH + P ++ +L N + Q+A G+
Sbjct: 465 TNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVI-SLSNENICQVACGHSLT 523
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
++L S VY++G G+LG+ + R+ + ++ +A G++H AV+
Sbjct: 524 VSLT---STGHVYTMGSTAYGQLGNPTAKGNFPARV--EGDIVEASVEEIACGSYHVAVL 578
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
+ TWG G G LGHG E + P VV L + + + G T V+
Sbjct: 579 TSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVI 630
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 37/312 (11%)
Query: 236 TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 295
T+ V P+ +ES + A G +++++G ++++ G +LGH E DV+
Sbjct: 272 TEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLE-TDVQQP 330
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 355
+ ++ + +A G + A+ Q + + G LGHG+ + P+ +
Sbjct: 331 KFISSVRGLGFKSLACGDFHTCAIT-QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG 389
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
L L VA G WH AVV G++ T+G G +G LGHG+ SVP+ V+ L+ +
Sbjct: 390 -ALQGLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIV 448
Query: 416 IHVATGDYTTFVV-------------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
VA G + T + S G V+++G GE LGH G+ A +L
Sbjct: 449 TKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGH-------GDNDAQLL 501
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
P+ V SL NE + Q++ +S+ T +LT +G +Y G+ GQLG N T
Sbjct: 502 -PECVISLS--NENICQVACGHSL-----TVSLTSTGHVYTMGSTAYGQLG-----NPTA 548
Query: 523 RGN-PERVDIDL 533
+GN P RV+ D+
Sbjct: 549 KGNFPARVEGDI 560
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 19/322 (5%)
Query: 147 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
++Q IA G H++ VT +G ++S+G G+LGHG + +P+ I S++G+ A G
Sbjct: 288 DAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLACG 347
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTA 264
T I+ +G +Y++G + G P+ V +L+ ++V A G + TA
Sbjct: 348 DFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTA 407
Query: 265 VLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-- 320
V++ G+++T +G+ + LGH + P + L + V ++A G + AL
Sbjct: 408 VVASSGQLFT--FGDGSFGALGHGDRRSTSVPRE-VKILSGLIVTKVACGVWHTAALVEV 464
Query: 321 --------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
S V++ G G G+LGHG + P + L N VA G
Sbjct: 465 TNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECV--ISLSNENICQVACGHSL 522
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ G V T G YG LG+ + +V + + +A G Y V++
Sbjct: 523 TVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKS 582
Query: 433 DVYSFGCGESASLGHNAIADGQ 454
++Y++G G + LGH I + +
Sbjct: 583 EIYTWGKGLNGQLGHGTIENKR 604
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G L + + D P+ +E +L+ Q +A G HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDVLLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
GHG E PK + ++ + +A GD+ T +++ GD+YS+G G HN G
Sbjct: 320 GHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGT-----HNVDLLG 374
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
GN ++ P+ VT Q + +S W HT + SG+L+ FG G G LG
Sbjct: 375 HGN-ESSCWIPKRVTGALQ----GLYVSYVACGPW--HTAVVASSGQLFTFGDGSFGALG 427
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
+G N +GQLG GTTE+ P+ I++ +GI I AAGA T +++ G+++ +G +G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
G + +LV PQ V S+ +V A G T +S G +YT+ W +LGH
Sbjct: 61 LGLGDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
+ + PH L L + QI+ G+ + +AL +Y G G++G G D
Sbjct: 119 EDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGK---LYGWGWNKFGQVGAGDNIDHC 174
Query: 349 HPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
P Q + Q V+ + W H V V +WG G G LGHG + P ++
Sbjct: 175 SPI---QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 231
Query: 408 QALN 411
+AL+
Sbjct: 232 EALS 235
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+LG G+ D P+ I+ F+ ++++ +VAAGA H A V +DG + WGWGRYG LG G
Sbjct: 7 GQLGLGTTEDSLVPQKIQAFEGISIK--MVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG 64
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ VP+ V +++ K + VA G T VS G +Y++G + LGH D
Sbjct: 65 DRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFED---- 120
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L P + +L+ N + QIS W HT ALT GKLY +G GQ+G
Sbjct: 121 ----RLVPHRLEALRGDN--ISQISGG----WR-HTMALTTDGKLYGWGWNKFGQVG 166
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 221 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+G++ G+ G LV PQ +++ + I + A G TA ++ +G ++ + WG
Sbjct: 1 WGRNQNGQLGLGTTEDSLV--PQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
LG + + P + +++ +V +A G+ + ++++ S +Y+ G G+LG
Sbjct: 59 GNLGLGDRNDRLVPQKV-SSVDGDKMVMVACGWRHTISVS---SLGGLYTYGWSKYGQLG 114
Query: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
HG D P +E + N+ + +G W H + DG++ WGW ++G +G G+
Sbjct: 115 HGDFEDRLVPHRLEALRGDNISQI---SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171
Query: 400 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
P ++ D K I ++ G T V++ +V+S+G G + LGH D
Sbjct: 172 DHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVD 224
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+I+V+S G +Y++G + GQLGHG E+ P + +L+G I Q + G TM ++
Sbjct: 92 HTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 151
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G++Y +G + FG+ G SP ++ ++ V+Q + G T ++ + V+++
Sbjct: 152 GKLYGWGWNKFGQVGAGDNIDHC--SPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSW 209
Query: 276 SWGNDARLGH 285
G + +LGH
Sbjct: 210 GRGTNGQLGH 219
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
SQ G H++A+T+ G +Y +G N GQ+G G + P I+ Q ++IQ + G
Sbjct: 136 SQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWR 195
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
T+ ++D V+++G+ + G+ +G + +P ++E+L
Sbjct: 196 HTLAVTDKQNVFSWGRGTNGQLGHGESVDR--NTPMILEAL 234
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 38/349 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
++++G N++G+LG GTT + P + + GI ++ A G+ ++ + G V+ +G ++
Sbjct: 471 LFAWGHNTNGELGDGTTTQRTSPTAVV-VSGI--VKTAGGSAHSVALGAGGAVWTWGYNA 527
Query: 226 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 285
+G+ G V +P + + + V A + + T LS +G V + + +LG+
Sbjct: 528 YGQLGNGTT--TQVVTPTQLPGMSGVIDVAAGVNH--TVALSADGTVAAWGYNAYGQLGN 583
Query: 286 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 345
T N + P + E V I+AG + +AL + V++ G L G+LG G+ T
Sbjct: 584 GTTANQLTPQSVP---ELDGVTAISAGSTHTVALKADGT---VWAWGSNLYGQLGDGTFT 637
Query: 346 DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
P Q+ +L+ VV +AAG +H V DG + WG+G G LG G +SVP
Sbjct: 638 HRSSP-----VQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVP 692
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
V L A+ +A G Y T + +G V+++G S LG I R++ VL P
Sbjct: 693 VQVSGLG--HAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQ----RYSPVLVP 746
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
L I+L Y T L G ++AFG GQLG
Sbjct: 747 GLTNV----------IALAAGGY---TTAVLKRDGTVWAFGYNPNGQLG 782
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 171/372 (45%), Gaps = 43/372 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A+ G + +G NS+GQLG+GTT P + +L + ++ AG T+
Sbjct: 356 HTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQD 413
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE---GRV 272
G +YA+G D+F YG GT TS + + V G +++ ++ +V
Sbjct: 414 GTLYAWG-DNF----YGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQV 468
Query: 273 YT-FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+T F+WG++ LG T P ++ + +V+ A G + +AL +G AV+
Sbjct: 469 HTLFAWGHNTNGELGDGTTTQRTSPTAVVVS----GIVKTAGGSAHSVALG---AGGAVW 521
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG+G+ T P + + + VAAG H + DG V WG+
Sbjct: 522 TWGYNAYGQLGNGTTTQVVTPTQLPGMSGV----IDVAAGVNHTVALSADGTVAAWGYNA 577
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
YG LG+G + P+ V L+ V AI + G T + DG V+++G LG
Sbjct: 578 YGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYGQLGDGT 635
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
+R + V P L E VV I+ + HT A+ G L+ +G G +
Sbjct: 636 FT----HRSSPVQVPSL--------ENVVSIAAGH-----FHTVAVKGDGTLWVWGYGPQ 678
Query: 510 GQLGIELVNNQT 521
GQLG+ NQ+
Sbjct: 679 GQLGLGTTTNQS 690
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 172/385 (44%), Gaps = 48/385 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV G +S+G+N+ GQLG GTT RP + L G+R + + G T+
Sbjct: 302 AGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRAL--SGGVVHTVA 359
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G + +G +S G+ G T + P V +L + A G + T ++G
Sbjct: 360 LKWDGTAWGWGYNSAGQLGNGT--TTNSSIPVQVAALTQAVEIDA--GGYHTLARRQDGT 415
Query: 272 VYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+Y +WG++ LG + P PL G V AGY Y +A + +
Sbjct: 416 LY--AWGDNFYGALGTGNTTSSSVPVQVPLSG------VRWFGAGYYYSVAERKKVNMAQ 467
Query: 328 VYSV---GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
V+++ G G+LG G+ T P + + V A G+ H+ +G G V T
Sbjct: 468 VHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGI-----VKTAGGSAHSVALGAGGAVWT 522
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG+ YG LG+G P + ++ V I VA G T +S DG V ++G
Sbjct: 523 WGYNAYGQLGNGTTTQVVTPTQLPGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQ 580
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+ AN LTPQ V L + V IS ++ HT AL G ++A+
Sbjct: 581 LGNGTT--------ANQLTPQSVPEL----DGVTAISAGST-----HTVALKADGTVWAW 623
Query: 505 GAGDKGQLGIELVNNQTERGNPERV 529
G+ GQLG T R +P +V
Sbjct: 624 GSNLYGQLGDGTF---THRSSPVQV 645
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 22/293 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ V S G ++++G+N SGQLG+G + P +R L +++ A+AGA ++ +++
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEHSVAVTED 213
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+ +G +++G+ G + V P V + ++ V AA T L +G V+T+
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAV--PVQVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269
Query: 276 SWGNDARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
+ LG T + + P P L + N IAAG + LA+ S +S G
Sbjct: 270 GINSSGELGDGTTTHSLLPIQVPNLSGVTN-----IAAGLWHTLAVKKDGS---AWSWGN 321
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G+LG G+ + P L+ + ++ G H + DG WG+ G L
Sbjct: 322 NAYGQLGDGTTLNRLRPVLVAGLTGVR----ALSGGVVHTVALKWDGTAWGWGYNSAGQL 377
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G+G S+P V AL +A+ + G Y T +DG +Y++G +LG
Sbjct: 378 GNGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALG 428
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 163/370 (44%), Gaps = 41/370 (11%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
A AG HS+AVT G V+++GSN+ GQLG GT R P++ ++ AA R
Sbjct: 199 SASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTL--RAVPVQVPGMSDVVAVAAAGSR 256
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ + G V+ +G +S GE G L+ P V +L + + A + + T + +
Sbjct: 257 TVALKADGTVWTWGINSSGELGDGTTTHSLL--PIQVPNLSGVTNIAAGL--WHTLAVKK 312
Query: 269 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G + SWGN+A +LG T N + P + G V ++ G + +AL +
Sbjct: 313 DGSAW--SWGNNAYGQLGDGTTLNRLRPVLVAGL---TGVRALSGGVVHTVALKWDGT-- 365
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
+ G G+LG+G+ T+ P + Q V + AG +H QDG + WG
Sbjct: 366 -AWGWGYNSAGQLGNGTTTNSSIPVQVAALT----QAVEIDAGGYHTLARRQDGTLYAWG 420
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG GN SVP V L+ V+ G Y + V+E V + G
Sbjct: 421 DNFYGALGTGNTTSSSVPVQVP-LSGVRWF--GAGYY--YSVAERKKVNMAQVHTLFAWG 475
Query: 447 HNA---IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
HN + DG T+ + VV + + +AH+ AL G ++
Sbjct: 476 HNTNGELGDG-------------TTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWT 522
Query: 504 FGAGDKGQLG 513
+G GQLG
Sbjct: 523 WGYNAYGQLG 532
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 16/253 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++A+++ G V ++G N+ GQLG+GTT + P+ + L G+ I +AG+ T+
Sbjct: 556 AGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVA 613
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + +G+ G + +SP V SL+N VV A G+F T + +G
Sbjct: 614 LKADGTVWAWGSNLYGQLGDGTFTHR--SSPVQVPSLEN--VVSIAAGHFHTVAVKGDGT 669
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
++ + +G +LG T N P + G V IAAG + +AL V++
Sbjct: 670 LWVWGYGPQGQLGLGTTTNQSVPVQVSGLGH---AVAIAAGGYHTVALLANGQ---VWTW 723
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG + P L+ L N+ + +AAG + AV+ +DG V +G+ G
Sbjct: 724 GYNSSGQLGDATIIQRYSPVLVP--GLTNV--IALAAGGYTTAVLKRDGTVWAFGYNPNG 779
Query: 392 CLGHGNEECESVP 404
LG G S P
Sbjct: 780 QLGDGTTTSRSSP 792
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
SG ++++ G G+LG+G RT P + Q V +AGA H+ V +DG V
Sbjct: 162 SGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN----QVVSASAGAEHSVAVTEDGSVW 217
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
TWG YG LG G +VP V ++DV A VA T + DG V+++G S
Sbjct: 218 TWGSNAYGQLGDGTNTLRAVPVQVPGMSDVVA--VAAAGSRTVALKADGTVWTWGINSSG 275
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG DG H+ L P V +L V + W HT A+ + G ++
Sbjct: 276 ELG-----DGT-TTHS--LLPIQVPNLSGVTNIAAGL-------W--HTLAVKKDGSAWS 318
Query: 504 FGAGDKGQLG 513
+G GQLG
Sbjct: 319 WGNNAYGQLG 328
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 19/148 (12%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
V+ G +H V G + WG G LG+G + P V+ LN V + + G +
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQV--VSASAGAEHS 207
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
V+EDG V+++G LG DG A P V + VV ++ S
Sbjct: 208 VAVTEDGSVWTWGSNAYGQLG-----DGTNTLRA---VPVQVPGMSD----VVAVAAAGS 255
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
T AL G ++ +G G+LG
Sbjct: 256 -----RTVALKADGTVWTWGINSSGELG 278
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 39/298 (13%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKE-VPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 387 WGRYGCLGHGNEECESVPKVVQALN---------------DVKAIHVATGDYTTFVVS 429
HG + +S P +AL DV+ H+ G Y FV +
Sbjct: 314 --------HGPSD-KSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
I+++ GD T V+ +DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNP 526
+ N + P
Sbjct: 215 LSGRNVPVQSNKP 227
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L + GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVISFGHG 315
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 150/326 (46%), Gaps = 28/326 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H+ V G V+ FG N GQLG G T+ +P ++SL+ + I A G T++
Sbjct: 43 CGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLI 102
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV----ESLKNIFVVQAAIGNFFTAVLS 267
++ +++AFG +S G+ G + V PQ++ E NI + A G +A L+
Sbjct: 103 STECNKIFAFGCNSDGQLGVGDLDDRWV--PQMISTDLEKTNNIIALSA--GCHHSAFLT 158
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
EG VY + +D + G E + P + +N P+ I+ GY Y A S
Sbjct: 159 EEGSVYIWGDNSDGQCGIKNENYLLNPRKI--EFQN-PINSISCGY-YHTAFI---SLGK 211
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
VY+ G GKLG + P +E L+ + V G H ++ + G+ +G
Sbjct: 212 VYTFGEDDNGKLGRSDKLPNDVPEGVE----LDENCISVKCGGSHTIILTESGKAYAFGS 267
Query: 388 GRYGCLGHGNEECE-SVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G LG GN E E S+P+ V ++ V I+V G+ + ++++G +Y+ G G + L
Sbjct: 268 NFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKL 327
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLK 471
+ + N+ TP + K
Sbjct: 328 CNE-------DESTNICTPTTIEMFK 346
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 42/322 (13%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I D G V+ FGK F E ++S V +N V + + G+ TA++ + GR
Sbjct: 9 IPDTGAVFTFGKSRFAED---------LSSHFFV---RNDPVKEISCGDEHTALVCKSGR 56
Query: 272 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY-LLALACQPSGMAVY 329
V+ F + +LG HT+ V L +L+ + +A G + L++ C ++
Sbjct: 57 VFLFGKNDFGQLGFGHTKI--VNKPSCLKSLKPFQSIHVACGKSHTLISTECNK----IF 110
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ GC G+LG G D P++I + ++AG H+A + ++G V WG
Sbjct: 111 AFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNS 170
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G G NE P+ ++ N + +I + G Y T +S G VY+FG ++ LG +
Sbjct: 171 DGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFISL-GKVYTFGEDDNGKLGRSD 227
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
P V +++E + + S HT LTESGK YAFG+
Sbjct: 228 ------------KLPNDVPEGVELDENCISVKCGGS-----HTIILTESGKAYAFGSNFS 270
Query: 510 GQLGIELVNNQTERGNPERVDI 531
GQLG L N +TE P+RV+
Sbjct: 271 GQLG--LGNFETEFSIPQRVNF 290
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 28/316 (8%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ + + G T L+ +G+V+ FGK+ FG+ +G TK+V P ++SLK + A
Sbjct: 38 VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG--HTKIVNKPSCLKSLKPFQSIHVAC 95
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 317
G T + + +++ F +D +LG + P + LE ++ ++AG C+
Sbjct: 96 GKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAG-CHHS 154
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVV 376
A + +VY G G+ G + +PR IE FQ P+ ++ G +H A +
Sbjct: 155 AFLTEEG--SVYIWGDNSDGQCGIKNENYLLNPRKIE-FQ----NPINSISCGYYHTAFI 207
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
G+V T+G G LG ++ VP+ V+ D I V G T +++E G Y+
Sbjct: 208 SL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVEL--DENCISVKCGGSHTIILTESGKAYA 264
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
FG S L G GN PQ V +E V I +T +H+ LT
Sbjct: 265 FGSNFSGQL-------GLGNFETEFSIPQRVNF---TDENVNLIYVT---CGESHSAFLT 311
Query: 497 ESGKLYAFGAGDKGQL 512
+ GKLY G G G+L
Sbjct: 312 DEGKLYTCGDGRNGKL 327
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 96/229 (41%), Gaps = 14/229 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS +T +G VY +G NS GQ G PR I I I + G T
Sbjct: 149 AGCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAF 206
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
IS G+VY FG+D G + G P+ VE +N V+ G T +L+ G+
Sbjct: 207 IS-LGKVYTFGEDDNG--KLGRSDKLPNDVPEGVELDENCISVKC--GGSHTIILTESGK 261
Query: 272 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
Y F +LG + E P + T EN+ ++ + G + L + +Y+
Sbjct: 262 AYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEG---KLYT 318
Query: 331 VGCGLGGKL-GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
G G GKL T+ P IE F+ + V+ G H V+ +
Sbjct: 319 CGDGRNGKLCNEDESTNICTPTTIEMFK--SFFCTYVSCGGCHTMVLAK 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+I+ + A S G VY+FG + +G+LG P + + I G
Sbjct: 195 NSISCGYYHTAFISLGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDE--NCISVKCGGSH 252
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T++++++G+ YAFG + G+ G T+ ++ + +N+ ++ G +A L+
Sbjct: 253 TIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTD 312
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
EG++YT G + +L + E ++ + ++ ++ G C+ + LA
Sbjct: 313 EGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLA 364
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKE-VPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 387 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
I+++ GD T V+ +DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNP 526
+ N + P
Sbjct: 215 LSGRNVPVQSNKP 227
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L + GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVISFGHG 315
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 153/300 (51%), Gaps = 15/300 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG + P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPS 324
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ C S
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQ-RVRSLEGIPLAQVAAGGTHSFALSLCGTS 202
Query: 325 GMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+ G G+L G + + + L NL V ++ G H AV+ QDG+V
Sbjct: 203 ----FGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
T+G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 259 TFGDNCSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPS-QASPQRVRSLEGIPLAQVAAGGTHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ VV I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLT---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVVSFG 313
Query: 387 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
G E + R G ++QAA+G ++L+ +V + G +S G+ G +G +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L G + P + AL ++
Sbjct: 180 GIPL--AQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
++++ GD T V+++DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 107/253 (42%), Gaps = 29/253 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
G + +PQ V SL+ I L H+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNP 526
+ N + P
Sbjct: 215 LSGRNVPAQSNKP 227
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 129/283 (45%), Gaps = 26/283 (9%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSL 198
Query: 431 DGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
G + +G G+ A G N A Q N+ P + +LK + VV IS +
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPA--QSNK------PLSIGALKNLG--VVYISCGDE-- 246
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT LT+ GK++ FG GQLG + ER+D
Sbjct: 247 ---HTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERID 286
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + ++ +
Sbjct: 184 AQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVVSFGHG 315
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + + V S G NS GQLG P PI++L+ + + + G
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ +P+ + +L I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEVPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
S G G P I + NL + ++ G H AV+ QDG+V T+
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSIGALK--NLGVIYISCGDEHTAVLIQDGKVFTF 260
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 442
G G LG+ + P++V+ ++ + + + G Y T V G V SFG G S
Sbjct: 261 GDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L GI+IIQ + G ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLA 142
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKE-VPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 272 VYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ L P +G L+N+ V+ I+ G + L
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLI---QDGK 256
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
V++ G G+LG+ +++ P+L+E+ L Q + G++H A V G+V ++G
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQ---IDCGSYHTLAYVHTTGQVISFG 313
Query: 387 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVS 429
G + E + + ++ A L DV+ H+ G Y FV +
Sbjct: 314 HGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFVTT 362
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 30/334 (8%)
Query: 180 GTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
GT E + R G ++QAA+G ++L+ +V + G +S G+ G +
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRG 63
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 298
P+ +++L+ + V + G + + +GRV+ + G++ +LG E ++ P +
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKI 122
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQ 357
TL I ++Q++ G+ + LAL+ V+S G G+LG G + P+ + +
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLE 179
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVK 414
+ L VAAG H+ + G WG G L + P + AL ++
Sbjct: 180 GIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG 237
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
I+++ GD T V+ +DG V++FG S LG++ + +G PQLV ++++
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG--------PQLV---ERID 286
Query: 475 ERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 507
V QI + HT A +G++ +FG G
Sbjct: 287 GLVSQIDCG-----SYHTLAYVHTTGQVISFGHG 315
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F WG D+R + E P ++Q A+G + L L + V S G
Sbjct: 3 FCWGTDSR---ELQRRRTERSP------GAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + P I+ + LN+ +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRRAPRGELPEPIQALETLNVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E PK + LN +K I V+ G Y + +S+D V+S+G LG
Sbjct: 109 IGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPS 168
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 169 QA-------SPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 514 IELVNNQTERGNP 526
+ N + P
Sbjct: 215 LSGRNVPVQSNKP 227
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G + +L RV + + +LG P P P+ LE + V ++ G
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPI-QALETLNVDLVSCG 83
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I L ++ + V+ G +
Sbjct: 84 KEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKITT--LNGIKIIQVSCGHY 138
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G S S G A++ +N P + +LK + V+ IS +
Sbjct: 199 CGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSIGALKNLG--VIYISCGDE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT L + GK++ FG GQLG + ER+D
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERID 286
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL G + +P I +L+ + +I +
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T ++ G+V+ FG +S G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 301 AYVHTTGQVISFGHG 315
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 19/308 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+TS G V ++G N+ GQLG+GTT P + GIRI+ A GA ++
Sbjct: 94 AGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLA 153
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++ G + A+G + G + G ++P V N V A G VL+ G
Sbjct: 154 LTSTGSLLAWGSNDTG--QLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGP 211
Query: 272 VYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP----VVQIAAGYCYLLALACQPSG 325
+WG + +LG T + P P+ N+P V IA G + LAL +
Sbjct: 212 AALLAWGANREGQLGDGTVVDRSRPVPV-----NLPTGLTVTAIAGGRDHSLALTSDDT- 265
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V + G G+LG G+ T P + + + +AAG H+ + DG W
Sbjct: 266 --VLAWGGNSHGQLGDGTTTGSLLP--VTVVLPVGAEATAIAAGRLHSLALTSDGTALAW 321
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS 444
G +G LG+G+ S P V + I +A+ D ++ +G ++G
Sbjct: 322 GGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGH 381
Query: 445 LGHNAIAD 452
LG D
Sbjct: 382 LGDGTTTD 389
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 151/365 (41%), Gaps = 37/365 (10%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S AV S + ++G N GQLG GTT + P +R G + AAG ++ ++ AG
Sbjct: 48 SAAVMSD-AILAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAG 106
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
V A+G+++ G+ G T P V I +V A+G + L+ G + +
Sbjct: 107 TVLAWGRNTEGQLGNGT--TTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSL--LA 162
Query: 277 WGN-------DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL-ACQPSGMAV 328
WG+ D + + P V P N V IAAG + L L A P+ +
Sbjct: 163 WGSNDTGQLGDGSVTSSSTPVAVRLPP------NTTVAAIAAGRDHNLVLTATGPAALLA 216
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ D P + L + +A G H+ + D V WG
Sbjct: 217 W--GANREGQLGDGTVVDRSRPVPVNLPTGLTV--TAIAGGRDHSLALTSDDTVLAWGGN 272
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G +P V +A +A G + ++ DG ++G LG+
Sbjct: 273 SHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNG 332
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ +D + + SL R++ I+ +S H A+T G A+G
Sbjct: 333 STSDS---------SEPVAVSLPG-GTRLISIASRDS----DHNVAITTEGAALAWGLNS 378
Query: 509 KGQLG 513
+G LG
Sbjct: 379 QGHLG 383
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 123/314 (39%), Gaps = 27/314 (8%)
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++SDA + A+G + G+ G T + P V V A G+ + L+ G
Sbjct: 51 VMSDA--ILAWGGNDGGQLGDGT--TTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAG 106
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V + + +LG+ T + EP + I +V +A G + LAL S + +
Sbjct: 107 TVLAWGRNTEGQLGNGTTTSSGEPV-AVSLPSGIRIVAVAVGADHSLALTSTGS---LLA 162
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG--RVCTWGWG 388
G G+LG GS T P + N +AAG H V+ G + WG
Sbjct: 163 WGSNDTGQLGDGSVTSSSTPVAVRLPP--NTTVAAIAAGRDHNLVLTATGPAALLAWGAN 220
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
R G LG G S P V + +A G + ++ D V ++G G S H
Sbjct: 221 REGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWG-GNS----HG 275
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ DG L P VT + V I+ H+ ALT G A+G
Sbjct: 276 QLGDGT---TTGSLLP--VTVVLPVGAEATAIA-----AGRLHSLALTSDGTALAWGGNH 325
Query: 509 KGQLGIELVNNQTE 522
GQLG ++ +E
Sbjct: 326 WGQLGNGSTSDSSE 339
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA- 204
E + AG HS+A+TS G ++G N GQLG+G+T + P + G R+I A+
Sbjct: 298 EATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASR 357
Query: 205 GAGRTMLISDAGQVYAFGKDSFGE 228
+ + I+ G A+G +S G
Sbjct: 358 DSDHNVAITTEGAALAWGLNSQGH 381
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G HS+AV + G V+S+GSN GQLG + P+ I L G I+Q AAG
Sbjct: 144 QVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAH 203
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ I+++G + +GK+SFG+ G V SP V SL++ + AA G TAVL++
Sbjct: 204 SLAITNSGALLTWGKNSFGQLGLGTNDG--VLSPTCVSSLRSQHIAYAACGEDHTAVLTK 261
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
EG V+TF G+ +LGH++ + P ++ L I V QI G Y L
Sbjct: 262 EGGVFTFGAGSSGQLGHNSLSHHCSPQMVVD-LMGIVVTQITCGRFYAL 309
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 133/276 (48%), Gaps = 16/276 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA-GAGRTML 211
G H+I + G +YS GSN GQ G + R I + + +RI ++ GA +
Sbjct: 42 GLNHTILLLQDGQIYSCGSNDYGQTGRQRNNK--RFARIDAFESMRITNVSSNGANHNLA 99
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
I+D +YA+G +S G+ Q K +P+ ++SL VVQ A G + + +G
Sbjct: 100 INDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDG 159
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V FSWG++ +LG + + VEP +L L +VQIAAG + +LA SG A+
Sbjct: 160 TV--FSWGSNRYGQLGIDSNVSSVEPKQIL-KLSGFYIVQIAAGGAH--SLAITNSG-AL 213
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGW 387
+ G G+LG G+ P + L Q + AA G H AV+ ++G V T+G
Sbjct: 214 LTWGKNSFGQLGLGTNDGVLSPTCVSS---LRSQHIAYAACGEDHTAVLTKEGGVFTFGA 270
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
G G LGH + P++V L + + G +
Sbjct: 271 GSSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRF 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 144/315 (45%), Gaps = 32/315 (10%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRP----IRSLQGIRIIQAAAGAGRTMLISDAGQVYAF 221
++++G GQLG G +E + + + I++I + G T+L+ GQ+Y+
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLI--SCGLNHTILLLQDGQIYSC 58
Query: 222 GKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN- 279
G + +G+ G Q K ES++ + N L+ + ++WG+
Sbjct: 59 GSNDYGQT--GRQRNNKRFARIDAFESMR----ITNVSSNGANHNLAINDKNCIYAWGDN 112
Query: 280 -DARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
D +LG T+ N + + + +L VVQ+A G + LA+ + V+S G
Sbjct: 113 SDGQLGV-TDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGT---VFSWGSNR 168
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG S P+ I +L V +AAG H+ + G + TWG +G LG
Sbjct: 169 YGQLGIDSNVSSVEPKQI--LKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGL 226
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G + P V +L + A G+ T V++++G V++FG G S LGHN+++
Sbjct: 227 GTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLS---- 282
Query: 456 NRHANVLTPQLVTSL 470
H +PQ+V L
Sbjct: 283 -HHC---SPQMVVDL 293
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 24/191 (12%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
+Y+ G G+LG + ++ R Q + L+ VV VA G H+ V DG V +WG
Sbjct: 106 IYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWG 165
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
RYG LG + PK + L+ + +A G + ++ G + ++G S G
Sbjct: 166 SNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWG---KNSFG 222
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA----HTFALTESGKLY 502
+ G VL+P V+SL+ + I + A HT LT+ G ++
Sbjct: 223 QLGLGTNDG-----VLSPTCVSSLR-----------SQHIAYAACGEDHTAVLTKEGGVF 266
Query: 503 AFGAGDKGQLG 513
FGAG GQLG
Sbjct: 267 TFGAGSSGQLG 277
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 21/190 (11%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+YS G G+ G R +++ R I+ F+ + + V + GA H + + WG
Sbjct: 55 IYSCGSNDYGQTGR-QRNNKRFAR-IDAFESMRITNVS-SNGANHNLAINDKNCIYAWGD 111
Query: 388 GRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
G LG ++ + P+ +++L+ + VA G + V DG V+S+G
Sbjct: 112 NSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQ 171
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG ++ NV + + LK +VQI+ AH+ A+T SG L +
Sbjct: 172 LGIDS----------NVSSVEPKQILKLSGFYIVQIAAGG-----AHSLAITNSGALLTW 216
Query: 505 GAGDKGQLGI 514
G GQLG+
Sbjct: 217 GKNSFGQLGL 226
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 10/286 (3%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N VV IA G + +A +G VY G G+LG G+
Sbjct: 162 SGSTVNQPIPRRVTGCLQNKVVVTIACG--QMCCMAVVDTG-EVYVWGYNGNGQLGLGNS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + Q + +Q VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRVAALQGIRVQR--VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 KVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
V D + I +T+ ++ G VY +G C G+S L H
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 149/323 (46%), Gaps = 53/323 (16%)
Query: 106 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 143
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEP 65
Query: 144 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---QLVESLKN 250
L ++I+ A G+ +++++ G+V+A+G ++ G+ G V P ++ L+N
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG----STVNQPIPRRVTGCLQN 180
Query: 251 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 309
VV A G + G VY + + + +LG N +P P + L+ I V ++
Sbjct: 181 KVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRV 238
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVA 367
A GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 239 ACGYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAA 291
Query: 368 AGAWH-AAVVGQDGRVCTWGWGR 389
+ H +A Q G V WG R
Sbjct: 292 CHSTHTSAAKTQGGHVYMWGQCR 314
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 26/316 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 252
LQ IR AG +L + +++ G + G G+ + P+ ++SL
Sbjct: 18 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC--LGLGDVRSTIEPRRLDSLNGKK 75
Query: 253 VVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 309
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V+++
Sbjct: 76 IACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G + L L S V++ G G++G GS ++ PR + L N V +A G
Sbjct: 134 ACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIACG 189
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
V G V WG+ G LG GN + P V AL ++ VA G T V++
Sbjct: 190 QMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLT 249
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
++G VY++G L G GN+ +N P VT K +R+++I+ +S + +
Sbjct: 250 DEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHTS 298
Query: 490 AHTFALTESGKLYAFG 505
A A T+ G +Y +G
Sbjct: 299 A---AKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQTERGNPERVDID 532
GQLG N++ + P V ++
Sbjct: 260 NSYGQLG---TGNKSNQSYPTPVTVE 282
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 143/288 (49%), Gaps = 16/288 (5%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA- 215
+I VT V++ G+N SG LG G + PR I +L G +I+ + G G + I+ A
Sbjct: 34 AIYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATAD 93
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+V+++G + + + G L +P LV + L V++ A G+ T L+ +G V+
Sbjct: 94 GEVFSWGHNGYSQLGNGTTNHGL--TPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFA 151
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + N ++G + N P + L+N VV IA G L ++A SG +Y G
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACG--QLCSMAVLDSG-EIYGWGYN 208
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G+ +++ P I Q + + VA G H + +G V WG YG LG
Sbjct: 209 CNGQLGLGNNGNQQTPCRIAALQ--GVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266
Query: 395 HGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
GN+ +++P ++ + + +V A H + +T+ ++ G V +G
Sbjct: 267 TGNKCNQALPTLINTDKERMAEVAACHTS---HTSAAKTQSGQVLMWG 311
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 140 EACCRRENSQAIAGPGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGI 197
+A C ++ G G +A+ T+ G V+S+G N QLG+GTT P + + L G
Sbjct: 69 DALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGK 128
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQA 256
R+I+ A G+ T+ ++ G+V+A+G ++ G+ G + +P+ V S L+N VV
Sbjct: 129 RVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQNKAVVNI 186
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 316
A G + + G +Y + + + +LG N P + L+ + V+Q+A GY +
Sbjct: 187 ACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTP-CRIAALQGVSVIQVACGYAHT 245
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
LAL G VY+ G G+LG G++ ++ P LI + + V + +A
Sbjct: 246 LALT--DEGF-VYAWGANSYGQLGTGNKCNQALPTLINTDK-ERMAEVAACHTSHTSAAK 301
Query: 377 GQDGRVCTWGWGR 389
Q G+V WG R
Sbjct: 302 TQSGQVLMWGQCR 314
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 152/321 (47%), Gaps = 27/321 (8%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P +R ++ + +AA + ++D +V+A G + G G+ + P+ +++
Sbjct: 15 PEELRLIRQACVFGSAANEAIYVTVND--EVFALGTNCSGC--LGLGDLQSTIEPRRIDA 70
Query: 248 LKNIFVVQAAIGNF-FTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 304
L +V + G A+ + +G V FSWG++ ++LG+ T + + P + L
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATADGEV--FSWGHNGYSQLGNGTTNHGLTPALVSTNLLGK 128
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
V+++A G + +AL + V++ G G++G GS ++ PR + L N V
Sbjct: 129 RVIEVACGSHHTIALT---TDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC-LQNKAVV 184
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G + V G + WG+ G LG GN + P + AL V I VA G
Sbjct: 185 NIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAH 244
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T ++++G VY++G L G GN+ N P L+ + K ER+ +++ +
Sbjct: 245 TLALTDEGFVYAWGANSYGQL-------GTGNK-CNQALPTLINTDK---ERMAEVAACH 293
Query: 485 SIYWNAHTFALTESGKLYAFG 505
+ + +A A T+SG++ +G
Sbjct: 294 TSHTSA---AKTQSGQVLMWG 311
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+S G +LG+G+ P L+ LL + + VA G+ H + DG V WG+
Sbjct: 96 VFSWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG--CGESAS 444
G +G G+ + P+ V + L + +++A G + V + G++Y +G C
Sbjct: 155 NNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLG 214
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG+N GN+ TP + +L+ V+ V+Q++ AHT ALT+ G +YA+
Sbjct: 215 LGNN------GNQQ----TPCRIAALQGVS--VIQVACGY-----AHTLALTDEGFVYAW 257
Query: 505 GAGDKGQLGIELVNNQTERGNPERVDID 532
GA GQLG N+ + P ++ D
Sbjct: 258 GANSYGQLG---TGNKCNQALPTLINTD 282
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+AV G +Y +G N +GQLG G + P I +LQG+ +IQ A G T+ ++D G
Sbjct: 193 SMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEG 252
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTF 275
VYA+G +S+G+ G + + + P L+ + K AA T A ++ G+V
Sbjct: 253 FVYAWGANSYGQLGTGNKCNQAL--PTLINTDKERMAEVAACHTSHTSAAKTQSGQV--L 308
Query: 276 SWGN-------DARLGHHTEPNDV 292
WG L H + +DV
Sbjct: 309 MWGQCRGQAVASPHLTHFSSTDDV 332
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 15/301 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G HS+ + S VYS G NS GQLG + +P PI++L + I + G
Sbjct: 25 QAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEH 84
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ + LS
Sbjct: 85 SIAVCHKGRVFAWGAGSEGQLGIG-EFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSE 143
Query: 269 EGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G+V FSWG ++ +LG + + + +LE IP+ Q+AAG + AL+ +
Sbjct: 144 DGQV--FSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSY 201
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
S G G S P I+ + NL + ++ G H AV+ +DG+V T+G
Sbjct: 202 GWGSNSVGQLALSGENSTVQISKPHSIDALK--NLGVIYISCGYEHTAVLTKDGQVFTFG 259
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G L + P++V+ + + + G Y T Y + G+ SLG
Sbjct: 260 DNSSGQLQNNPRGKRRGPQLVEGIKG-QVSKIECGSYHTI-------AYVYTTGQVVSLG 311
Query: 447 H 447
H
Sbjct: 312 H 312
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 31/257 (12%)
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
F W D+R +P L G + + ++Q A+G + L L S VYS G
Sbjct: 3 FHWAADSR----------QPRRLNGR-DGLELLQAASGERHSLLLF---SNHRVYSCGDN 48
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG + + P I+ L++ +V+ G H+ V GRV WG G G LG
Sbjct: 49 SLGQLGQKREQNTEQPEPIQALGTLDID--LVSCGKEHSIAVCHKGRVFAWGAGSEGQLG 106
Query: 395 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E +P ++ L +K I V+ G Y + +SEDG V+S+G LG +
Sbjct: 107 IGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSS 166
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
Q +PQ VTSL+ I L +H+FAL+ +G Y +G+ GQL
Sbjct: 167 QA-------SPQKVTSLEG-------IPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLA 212
Query: 514 IELVNNQTERGNPERVD 530
+ N+ + P +D
Sbjct: 213 LSGENSTVQISKPHSID 229
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 21/290 (7%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
+PR + G+ ++QAA+G ++L+ +VY+ G +S G+ G + + P+ ++
Sbjct: 11 QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQ--LGQKREQNTEQPEPIQ 68
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 305
+L + + + G + + +GRV+ + G++ +LG E ++ P+ + TL I
Sbjct: 69 ALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIK 127
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPV 364
++Q++ G+ + LAL+ V+S G G+LG G ++ + P+ + + + L V
Sbjct: 128 IIQVSCGHYHSLALS---EDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQV 184
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE---SVPKVVQALNDVKAIHVATG 421
AAG H+ + G WG G L E S P + AL ++ I+++ G
Sbjct: 185 --AAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCG 242
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
T V+++DG V++FG S L +N +G PQLV +K
Sbjct: 243 YEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRG--------PQLVEGIK 284
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 47/303 (15%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL--LG 299
P+ + + ++QAA G + +L RVY+ + +LG E N +P P+ LG
Sbjct: 12 PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALG 71
Query: 300 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 359
TL+ + ++ G + +A+ C V++ G G G+LG G +F+ +
Sbjct: 72 TLD---IDLVSCGKEHSIAV-CHKG--RVFAWGAGSEGQLGIG------------EFKEI 113
Query: 360 NLQP-----------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVV 407
NL P + V+ G +H+ + +DG+V +WG G LG G + ++ P+ V
Sbjct: 114 NLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKV 173
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
+L + VA G +F +S G Y +G S S+G A++ G+ N + P +
Sbjct: 174 TSLEGIPLAQVAAGGSHSFALSLTGTSYGWG---SNSVGQLALS-GE-NSTVQISKPHSI 228
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+LK N V+ IS HT LT+ G+++ FG GQL N + +R P+
Sbjct: 229 DALK--NLGVIYISCGYE-----HTAVLTKDGQVFTFGDNSSGQLQ---NNPRGKRRGPQ 278
Query: 528 RVD 530
V+
Sbjct: 279 LVE 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G Y +GSNS GQL G +T + +P I +L+ + +I +
Sbjct: 182 AQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISC 241
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T +++ GQV+ FG +S G+ + +G + PQLVE +K V + G++ T
Sbjct: 242 GYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKR--RGPQLVEGIKGQ-VSKIECGSYHTI 298
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPH 295
Y ++ G LGH P H
Sbjct: 299 -------AYVYTTGQVVSLGHGPRPTSNPTH 322
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 162/361 (44%), Gaps = 36/361 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC------------------------VF 51
Query: 152 AGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RT 209
G+ + T+ ++ G+N G LG G + PR + SL G ++ + G+G
Sbjct: 52 GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHV 111
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +
Sbjct: 112 VLATSEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKRVIEVACGSYHSLVLTSD 170
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G V+ + + N ++G + N P + G L+N VV IA G + ++A +G VY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTG-EVY 227
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G ++ P + Q + +Q A G H V+ +G+V WG
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRA--ACGYAHTLVLTDEGQVYVWGANS 285
Query: 390 YGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLG 446
YG LG GN+ + P + D + I +T+ ++ G VY +G C G+S L
Sbjct: 286 YGQLGTGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVLP 345
Query: 447 H 447
H
Sbjct: 346 H 346
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N + + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKRVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLG 238
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G GN+ TP V +L+ I + + AHT LT+ G++Y +GA
Sbjct: 239 ----LGGSGNQP----TPCRVAALQ-------GIRVQRAACGYAHTLVLTDEGQVYVWGA 283
Query: 507 GDKGQLGIELVNNQ 520
GQLG +NQ
Sbjct: 284 NSYGQLGTGNKSNQ 297
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 31/322 (9%)
Query: 92 QLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAI 151
Q ++S L LD+ K IF +E E Q ++Q C F AG
Sbjct: 17 QATLSSLKMLDV-GKWPIFSLCSEEELQLIRQAC--------VFGSAGN----------- 56
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTM 210
+ T ++ G+N G LG G + PR + SL G +I + G+G +
Sbjct: 57 ----EVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIV 112
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
L + G+V+ +G +++ + G LV + +L N V++ A G++ + VL+ +G
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + N ++G + N P + G L+N VV IA G + +A +G VY
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTG-EVYV 228
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ ++ P + Q + +Q V A G H V+ +G+V WG Y
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSY 286
Query: 391 GCLGHGNEECESVPKVVQALND 412
G LG GN+ +S P V D
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKD 308
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 251
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 42 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98
Query: 252 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 308
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156
Query: 309 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Query: 429 SEDGDVYSFGCGESASLG 446
+++G VY++G LG
Sbjct: 273 TDEGQVYAWGANSYGQLG 290
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LG+G+ P I L N Q + VA G++H+ V+ DG V WG+ G +G G+
Sbjct: 130 QLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS 188
Query: 398 EECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ +P+ V L + + +A G V + G+VY +G + LG GN
Sbjct: 189 TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG-------LGN 241
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
N TP V +L+ + + V AHT LT+ G++YA+GA GQLG
Sbjct: 242 S-GNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGANSYGQLG--- 290
Query: 517 VNNQTERGNPERVDID 532
N++ + P V ++
Sbjct: 291 TGNKSNQSYPTPVTVE 306
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 31/340 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ S G ++++G N GQLG +T + P + +L + +AG ++ +
Sbjct: 762 GENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLAL 819
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+AFG + +G+ G ++ +P V+ L + + A G F+ L +G V
Sbjct: 820 KSDGTVWAFGYNGYGQLGDGTTSSQR--TPVQVKDLTGVVAIAA--GKDFSLALKSDGTV 875
Query: 273 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ SWG + LG+ T P + + V IAAG + +AL S V++
Sbjct: 876 W--SWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFA 927
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG+ S + P Q + ++ + AAG +H + DG V +WG+ Y
Sbjct: 928 WGYNGNGELGNSSTISQSTPV---QSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGY 982
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG+GN SVP + L + +I A G+ + DG +YS+G + LG+
Sbjct: 983 GQLGNGNNTSRSVPAAIPGLASIASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTT 1040
Query: 451 AD--------GQGNRHANVLTPQLVTSLKQVNERVVQISL 482
D G A+ P V+ L+ ++ V ++L
Sbjct: 1041 VDTNVPHKVIGPNINPADTTAPAAVSDLRVSSQNVRSLTL 1080
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 161/361 (44%), Gaps = 42/361 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ + S G V+ +G N GQLG GT+ P + +L G+++I A G T+ +
Sbjct: 715 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 772
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G ++ +G + +G + G T SP V +L N V A G + L +G V+ F
Sbjct: 773 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 828
Query: 276 SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ +LG T + P L G VV IAAG + LAL + V+S G
Sbjct: 829 GYNGYGQLGDGTTSSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGT---VWSWG 879
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG+G+ T P ++ L +++ +AAG +H + +DG V WG+ G
Sbjct: 880 QNTYGELGNGTTTRSSVP--VQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYNGNGE 935
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG+ + +S P V + +K I A G Y T + DG V+S+G LG+
Sbjct: 936 LGNSSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLGN----- 987
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
GN + + P + L + + + A G LY++G GQL
Sbjct: 988 --GNNTSRSV-PAAIPGLASIASIAAGEN---------QSIAYGNDGILYSWGRNANGQL 1035
Query: 513 G 513
G
Sbjct: 1036 G 1036
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 17/256 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V++FG N GQLG GTT + P ++ L G+ I AAG ++
Sbjct: 811 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAI--AAGKDFSLA 868
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+++G++++GE G T + P V L ++ + A G++ L ++G
Sbjct: 869 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 924
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + + LG+ + + + P+ + I IAAG + LAL + V+S
Sbjct: 925 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALKSDGT---VWSW 977
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG+G+ T P I + +AAG + G DG + +WG G
Sbjct: 978 GYNGYGQLGNGNNTSRSVPAAIPGLASI----ASIAAGENQSIAYGNDGILYSWGRNANG 1033
Query: 392 CLGHGNEECESVPKVV 407
LG+G +VP V
Sbjct: 1034 QLGNGTTVDTNVPHKV 1049
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 31/168 (18%)
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
L P+ V+ H + DG V WG+ +G LG G SVP V L +K I
Sbjct: 702 LGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI-- 759
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G+ T + DG ++++G LG D R++ V QV+
Sbjct: 760 AGGENHTVALRSDGTLHTWGYNGYGQLGD----DSTTTRYSPV----------QVS---- 801
Query: 479 QISLTNSIYWNA------HTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+LTN W A H+ AL G ++AFG GQLG ++Q
Sbjct: 802 --TLTN---WTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQ 844
>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
Length = 494
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 37/316 (11%)
Query: 148 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I +L I+ A G
Sbjct: 123 SCVVSGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACG 182
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T+ +++ G VY+FG++ G+ G Q T V +P L+ S +V+ A G F+ V
Sbjct: 183 RNHTLALTEDGAVYSFGENKLGQLGQGNQ-TDAVLTPALI-SYNGQPLVKVACGAEFSMV 240
Query: 266 LSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLE 302
+ +G +Y+F +LGH+++ D E P + +
Sbjct: 241 VDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVP 300
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
N+ V +A G + L L Q V++ G G G+LGH + DE PRL++ F
Sbjct: 301 NVVVRDVACGANHTLVLDSQKR---VFTWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRG 357
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
+ AG + V + G + WG + + + E PK VQ L K +A G
Sbjct: 358 ASQIYAGYQCSFAVSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGK 411
Query: 423 YTTFVVSEDGDVYSFG 438
++ +++ D S+G
Sbjct: 412 -SSIIIAADESTISWG 426
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLFITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 168
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E L V VA G H + +DG V ++G + G LG GN+ + + + N
Sbjct: 169 EA--LAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALISYNGQ 226
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 469
+ VA G + VV G++YSFGC E LGHN+ IA Q L P+ V
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAI 286
Query: 470 LKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ ++ + + N + + HT L +++ +G G G+LG
Sbjct: 287 FIEKSKDGQIMPVPNVVVRDVACGANHTLVLDSQKRVFTWGFGGYGRLG 335
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 52/166 (31%)
Query: 385 WGWGRYGC-------------------------------------LGHGNEECESVPKVV 407
WG RYGC LGHG+ + PK++
Sbjct: 109 WGPHRYGCLNDVQVSCVVSGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLI 168
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
+AL + + VA G T ++EDG VYSFG + L GQGN+ VLTP L+
Sbjct: 169 EALAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQL-------GQGNQTDAVLTPALI 221
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ Q +V+++ + + G LY+FG + GQLG
Sbjct: 222 SYNGQP---LVKVACGAEF-----SMVVDCKGNLYSFGCPEYGQLG 259
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G ++ + E P+ ++ L G +I A
Sbjct: 356 RGASQIYAGYQCSFAVSEMGGLFFWGVTNT------SRESTMYPKAVQDLCGWKIRSLAC 409
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L I++ Q +G +
Sbjct: 410 GKSSIIIAADESTISWGPSPTFGELGYGDTKPKSSTTAQEVKTLDGIYIEQVVMGYSHSL 469
Query: 265 VLSRE 269
V++R+
Sbjct: 470 VIARQ 474
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 210
G H++ + S+ V+++G G+LGH ++E PR ++ G Q AG +
Sbjct: 310 GANHTLVLDSQKRVFTWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRGASQIYAGYQCSF 369
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSR 268
+S+ G ++ +GV T ++ P+ V+ L + A G + +
Sbjct: 370 AVSEMGGLFF----------WGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIIAAD 419
Query: 269 EGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
E T SWG G T+P + TL+ I + Q+ GY + L +A Q +
Sbjct: 420 ES---TISWGPSPTFGELGYGDTKPKSSTTAQEVKTLDGIYIEQVVMGYSHSLVIARQDT 476
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 10/296 (3%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S VT G +Y G + G+LG G P IRSL ++I++ A G + +++
Sbjct: 1655 SAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEK 1714
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
+VYA+G +G A GV T V PQ + SL ++ G F +A LS+ G ++ +
Sbjct: 1715 RVYAWGDGKWGNA--GVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWG 1772
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPV-VQIAAGYCYLLALACQPSGMAVYSVGCGL 335
++ +LG T + + L+ + + V + A + +L P+ +++ G
Sbjct: 1773 KNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPN---LFTCGLNA 1829
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG G D ++ L + Q V + GA H A V Q G + TWG GR G LG
Sbjct: 1830 NGQLGLGDFVDRSTLTAVD--ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGL 1887
Query: 396 GNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
+ + VQ A+ + + V G T VVSE G++Y G + LG N+
Sbjct: 1888 KAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNS 1943
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 24/305 (7%)
Query: 164 GVVYSFGSNSSGQLGHGT----TEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
G +Y++G G+LGHG +EE + P+ I +L + ++ A G T ++D G+V
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278
Y +GK + G+ G + PQLV+ L + V Q ++G A + + F WG
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF--FVWG 632
Query: 279 ND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
++ +LG H +P+ + +L + IA G + L S V S G G
Sbjct: 633 SNTFGQLGIPHISSYMPDPYEIT-SLREANIRSIACGGWHTLISTNTGS---VMSCGKGW 688
Query: 336 GGKLGHG--------SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
G+LGHG S+T +++E F + V V+AG +A + GR+ TWG
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFG--DSFIVKVSAGKESSAAITNKGRLFTWGK 746
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LGH + + E+ P+ V+ ++ + V+ GD + G YS+G G + LGH
Sbjct: 747 GDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGH 806
Query: 448 NAIAD 452
+ +
Sbjct: 807 GEMCE 811
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 133/301 (44%), Gaps = 34/301 (11%)
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG------ 270
V+ +G G+ G Q ++ P +V + +N+ V A+G T LS +G
Sbjct: 91 HVFMWGDGENGK--LGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148
Query: 271 -RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPS 324
VY D L T ++ L L+ I +V IAAGY + LAL +
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLAL--NDT 206
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G ++S G G GKLG GS + + PR + Q N + V +A GA H A + G V T
Sbjct: 207 G-KIFSWGSGSWGKLGIGSDANAESPRFVASLQ--NSKVVHIACGAHHTAAITTVGDVWT 263
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG G G LGH + + E P++ +L A + GD T V+ G +YS G
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG D + P LVT NE+V+ I + ALT +GK++AF
Sbjct: 324 LGLGDATD--------RIIPTLVTGF--ANEKVIDIDAK-----GCRSIALTNTGKVFAF 368
Query: 505 G 505
G
Sbjct: 369 G 369
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 38/279 (13%)
Query: 273 YTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ F WG+ + +LG+ +E P+ ++ N+ V A G + L L+ V S
Sbjct: 91 HVFMWGDGENGKLGNQSEEIQHVPY-IVPAFRNVLVKVCALGKQHTLFLSADG---VVLS 146
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVV--------VAAGAWHAAVVGQD 379
G + G+LG G + + E Q L LQ ++ +AAG +H+ +
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G++ +WG G +G LG G++ P+ V +L + K +H+A G + T ++ GDV+++G
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGK 266
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
G LGH ++ + +P+L SL++ + ++ + HT + SG
Sbjct: 267 GLRGQLGHKSVKE--------EFSPRLNASLRKCGAQKIRCG-------DDHTLVILRSG 311
Query: 500 KLYAFGAGDKGQLGIELVNNQ------TERGNPERVDID 532
+LY+ GA GQLG+ ++ T N + +DID
Sbjct: 312 QLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDID 350
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 179/444 (40%), Gaps = 84/444 (18%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSL 194
L G A C+ + G HS A+ G + +G N GQLGHG T+ PR L
Sbjct: 1320 LDGRAPCK-----ILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRL 1374
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
+G ++ A GA T+++ A +V+A G + G+ P +E L +
Sbjct: 1375 EG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNIC 1433
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAA 311
Q A G+ + LS G V+ SWG +LGH T + + P PLL + P V+ IA
Sbjct: 1434 QVAAGDQHSLALSVFGEVW--SWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIAC 1491
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ--------LLNLQP 363
GY + A++ + V++ G G G+LGH + P LI+ F ++
Sbjct: 1492 GYTFSAAMSAKGE---VFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAG 1548
Query: 364 VV--------------------------VAAG-------------------AWHAAVVGQ 378
+V +AAG A+ A+ +
Sbjct: 1549 IVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKR 1608
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
G V WG G LG + P ++Q+L +H++ + V++ G +Y G
Sbjct: 1609 HGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668
Query: 439 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 498
E LG +A TP + SL V ++++++ H ALTE
Sbjct: 1669 GSEHGRLGLGHMAPAP--------TPVEIRSLNTV--KIMKVACG-----TYHCLALTEE 1713
Query: 499 GKLYAFGAGDKGQLGIELVNNQTE 522
++YA+G G G G+ N+ E
Sbjct: 1714 KRVYAWGDGKWGNAGVSNTNDVLE 1737
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 181/452 (40%), Gaps = 39/452 (8%)
Query: 80 FFRQPANFAPDYQLSISELAALDMCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAG 139
+ P F P + S + +I + +A+ + K + GG +K L G
Sbjct: 1087 IMKMPKQFPPMF-YSYKDDQRFYFSWPPSITGEIAKAKNDEKKARAGGPFKEYFNRLNIG 1145
Query: 140 E--ACCRR-------ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP 190
C R E + A + + + + +Y++G +G+LGHG P+
Sbjct: 1146 RILQCLVRYSEKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQE 1205
Query: 191 IRSL-QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLV 245
I S +I++ A G ++ S G VYA+G G+ + +PQ V
Sbjct: 1206 ITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPV 1265
Query: 246 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+LK F++ A G + L+ E +V ++ G +LG + P + P
Sbjct: 1266 LNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP 1325
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
+ G+ + A SG + G + G+LGHG PR + Q+ L +
Sbjct: 1326 CKILCGGWH---SAAILESG-KILLWGKNVYGQLGHGDTKSCSAPR-VNQYLRLEGKVRT 1380
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDY 423
GA H VV +V G G LG + ++VP ++ LN VA GD
Sbjct: 1381 AGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQ 1440
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ +S G+V+S+G LGH I D L P + ++ V I+
Sbjct: 1441 HSLALSVFGEVWSWGGSPFGQLGHETITDK--------LAPTPLLERHKIPPDVKSIAC- 1491
Query: 484 NSIYWNAHTF--ALTESGKLYAFGAGDKGQLG 513
+TF A++ G+++ +G G+ G+LG
Sbjct: 1492 ------GYTFSAAMSAKGEVFTWGNGESGELG 1517
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT--------TEEEWRPRPIRSLQGI-----RI 199
G H++ +++ GVV S GSN GQLG G E + + + LQ I I
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AAG ++ ++D G+++++G S+G + G+ SP+ V SL+N VV A G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWG--KLGIGSDANAESPRFVASLQNSKVVHIACG 248
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
TA ++ G V+T+ G +LGH + + P L +L +I G + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPR-LNASLRKCGAQKIRCGDDHTLVI 307
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
SG +YS+G G+LG G TD P L+ F N + + + A + +
Sbjct: 308 L--RSGQ-LYSMGANTHGQLGLGDATDRIIPTLVTGFA--NEKVIDIDAKGCRSIALTNT 362
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSF 437
G+V +G +P+ V L +D+ I VA + F +S+ G ++ +
Sbjct: 363 GKVFAFG-------NETEPHLNRIPRFVAGLPKSDL-IIAVARTAHFDFAISDTGQLFRW 414
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 171/394 (43%), Gaps = 59/394 (14%)
Query: 141 ACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
A R+ +Q I G H++ + G +YS G+N+ GQLG G + P + ++
Sbjct: 287 ASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKV 346
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAI 258
I A R++ +++ G+V+AFG ++ L P+ V L K+ ++ A
Sbjct: 347 IDIDAKGCRSIALTNTGKVFAFGNET---------EPHLNRIPRFVAGLPKSDLIIAVAR 397
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLL 317
F +S G++ F W ++ E +L + I VV++ G+ + +
Sbjct: 398 TAHFDFAISDTGQL--FRW--------RPFSSEEESSRMLESFHAIKGVVRMFCGHNH-M 446
Query: 318 ALACQPSGMAVYSVGC--GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW---H 372
A+ C P +GC + + S + + +E+F + P + +
Sbjct: 447 AVICSP------EMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEF 500
Query: 373 AAVVGQ-------DGRVCTWGWGRYGCLGHG-----NEECESVPKVVQALNDVKAIHVAT 420
A V + DG + T+G G +G LGHG +EE PK ++ L + + +A
Sbjct: 501 ATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIAC 560
Query: 421 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
G +T +++ G VY++G LG G G A ++ PQLV L + V QI
Sbjct: 561 GKDSTAALTDTGKVYTWGKSAQGKLGL-----GSGKPLA-IVVPQLVQDLS--SHVVCQI 612
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
SL + H T+ K + +G+ GQLGI
Sbjct: 613 SLGRN-----HAACSTDMHKFFVWGSNTFGQLGI 641
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 173/406 (42%), Gaps = 35/406 (8%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L G+ C Q AG HS+A++ G V+S+G + GQLGH T ++ P P+
Sbjct: 1427 LNGKNIC-----QVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHK 1481
Query: 197 I--RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
I + A G + +S G+V+ +G GE G L +P L++ VV
Sbjct: 1482 IPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGE--LGHAPKVLTYAPSLIKDFSE--VV 1537
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHH--TEPNDVEPHPLLGTLENIPVVQIAAG 312
Q A G A + + R+ T + +G + T + + G+ +
Sbjct: 1538 QIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTR 1597
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
A + Q V+ G G+LG + P L++ LL V ++A +
Sbjct: 1598 TSAFSA-SNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQS--LLATSIVHISANSDM 1654
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+A V G + G +G LG G+ P +++LN VK + VA G Y ++E+
Sbjct: 1655 SAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEK 1714
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
VY++G G+ + G + D VL PQ ++SL S+ H+
Sbjct: 1715 RVYAWGDGKWGNAGVSNTND--------VLEPQELSSL-------AACSIIGVHAGGFHS 1759
Query: 493 FALTESGKLYAFGAGDKGQLGIELV----NNQTERGNPERVDIDLS 534
AL++ G L+ +G GQLG+ ++ T+ N + V +D+S
Sbjct: 1760 AALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVS 1805
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 157/349 (44%), Gaps = 33/349 (9%)
Query: 164 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
G V+ +G ++ GQLG + P ++SL I+ +A + + ++D+G +Y G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGG 1669
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
G G+ +P + SL + +++ A G + L+ E RVY +WG D +
Sbjct: 1670 SEHG--RLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVY--AWG-DGKW 1724
Query: 284 GHH--TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
G+ + NDV L +L ++ + AG + AL+ ++ G G+LG
Sbjct: 1725 GNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGD---LFMWGKNSNGQLGL 1781
Query: 342 GSRT-DEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQ--DGRVCTWGWGRYGCLGHG 396
G+ + E P I NL VV V+ GA H+AV+ Q + T G G LG G
Sbjct: 1782 GTTSAAEDSPTKIS-----NLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLG 1836
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ S V AL+D + + + G T VS+ GD+ ++G G + LG A
Sbjct: 1837 DFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKA------G 1890
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
++ P + ++ N+ +V++ + T ++E G+LY G
Sbjct: 1891 LSKDIENPVQLPAI--CNDPMVKVVCGQEV-----TIVVSEKGELYMAG 1932
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 27/303 (8%)
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+ +G+D+ G+ G++G + SP L++SL +V + + +A ++ G +Y
Sbjct: 1610 GCVFVWGEDTCGQ--LGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVS 1667
Query: 276 SWGNDARLG-HHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
RLG H P P P+ + +L + ++++A G + LAL + VY+ G
Sbjct: 1668 GGSEHGRLGLGHMAP---APTPVEIRSLNTVKIMKVACGTYHCLALTEEKR---VYAWGD 1721
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G G G + D P+ + ++ + V AG +H+A + Q G + WG G L
Sbjct: 1722 GKWGNAGVSNTNDVLEPQELSSLAACSI--IGVHAGGFHSAALSQYGDLFMWGKNSNGQL 1779
Query: 394 GHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
G G E P + L+ V + V+ G + V+ + F CG +A+ G + D
Sbjct: 1780 GLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQVTSPNLFTCGLNAN-GQLGLGD 1837
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+ +T++ +++R + + + AHT A+++ G L +G G GQL
Sbjct: 1838 --------FVDRSTLTAVDALDDRQIVSASCGA----AHTAAVSQYGDLITWGNGRNGQL 1885
Query: 513 GIE 515
G++
Sbjct: 1886 GLK 1888
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRP--IRSLQGIRIIQAAA 204
Q G H+ T + +GSN+ GQLG H ++ + P P I SL+ I A
Sbjct: 611 QISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISS---YMPDPYEITSLREANIRSIAC 667
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL------VESLKNIFVVQAAI 258
G T++ ++ G V + GK G+ +G + S L VE + F+V+ +
Sbjct: 668 GGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSA 727
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G +A ++ +GR++T+ G++ +LGH + N+ P + I VV ++ G ++LA
Sbjct: 728 GKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPRE-VEFFAKIRVVDVSIGDSHMLA 786
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLI 353
L SG+ YS G G G+LGHG + E PR I
Sbjct: 787 L--DYSGLP-YSWGNGSAGQLGHGEMCERETLPRPI 819
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ +TS+ V S+G+ GQLG + P+ +++L G + G + I
Sbjct: 1279 GRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAI 1338
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGR 271
++G++ +GK+ +G+ +G TK ++P++ + L+ V A +G T V+ +
Sbjct: 1339 LESGKILLWGKNVYGQLGHG--DTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANK 1396
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ D +LG + P+ + L + Q+AAG + LAL+ V+S
Sbjct: 1397 VFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGE---VWS 1453
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LGH + TD+ P + + + +A G +A + G V TWG G
Sbjct: 1454 WGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGES 1513
Query: 391 GCLGHGNEECESVPKVVQALNDVKAI 416
G LGH + P +++ ++V I
Sbjct: 1514 GELGHAPKVLTYAPSLIKDFSEVVQI 1539
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G ++S+GS S G+LG G+ PR + SLQ +++ A GA T
Sbjct: 195 AGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAA 254
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ G V+ +GK G + G + K SP+L SL+ + G+ T V+ R G+
Sbjct: 255 ITTVGDVWTWGKGLRG--QLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQ 312
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+Y+ +LG + + P + G N V+ I A C +AL
Sbjct: 313 LYSMGANTHGQLGLGDATDRIIPTLVTG-FANEKVIDIDAKGCRSIAL 359
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G V+ G G GKLG+ S + P ++ F+ N+ V A G H + DG V +
Sbjct: 89 GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFR--NVLVKVCALGKQHTLFLSADGVVLS 146
Query: 385 WGWGRYGCLGHGN---------------EECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
G YG LG G+ + + + ++Q+LN++ + +A G Y + ++
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI--VGIAAGYYHSLALN 204
Query: 430 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 489
+ G ++S+G G LG + AN +P+ V SL+ N +VV I+
Sbjct: 205 DTGKIFSWGSGSWGKLGIGS--------DANAESPRFVASLQ--NSKVVHIACGAH---- 250
Query: 490 AHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
HT A+T G ++ +G G +GQLG + V +
Sbjct: 251 -HTAAITTVGDVWTWGKGLRGQLGHKSVKEE 280
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 31/259 (11%)
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
L E +YT+ G + RLGH P + N +V++A G + LA +
Sbjct: 1175 LEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG-- 1232
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVV 376
VY+ G G G+LG D ++ N QPV+ +A G WH +
Sbjct: 1233 -GVYAWGAGDRGQLGSLENFD-----CVKINYAFNPQPVLNLKRYFILSIACGRWHNMTL 1286
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
+ +V +WG G +G LG + + P++V+AL+ + G + + + E G +
Sbjct: 1287 TSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILL 1346
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G LGH R V ++ +V L + HT +
Sbjct: 1347 WGKNVYGQLGHGDTKSCSAPR---------VNQYLRLEGKVRTAGLGAN-----HTLVVM 1392
Query: 497 ESGKLYAFGAGDKGQLGIE 515
+ K++A G+ GQLG++
Sbjct: 1393 VANKVFAMGSNIDGQLGLD 1411
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRIIQAAAGAGRTM 210
G + A+T G VY++G ++ G+LG G+ + P+ ++ L + Q + G
Sbjct: 561 GKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAA 620
Query: 211 LISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+D + + +G ++FG + G+ + + P + SL+ + A G + T + +
Sbjct: 621 CSTDMHKFFVWGSNTFG--QLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT 678
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-------VVQIAAGYCYLLALACQ 322
G V + G +LGH + L + I +V+++AG A+ +
Sbjct: 679 GSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK 738
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+++ G G +LGH S +E +PR +E F ++ V V+ G H + G
Sbjct: 739 GR---LFTWGKGDEYQLGHESSKNEAYPREVEFFA--KIRVVDVSIGDSHMLALDYSGLP 793
Query: 383 CTWGWGRYGCLGHGNE-ECESVPKVV 407
+WG G G LGHG E E++P+ +
Sbjct: 794 YSWGNGSAGQLGHGEMCERETLPRPI 819
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
Q V WG G G LG+ +EE + VP +V A +V A G T +S DG V S
Sbjct: 88 QGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSC 147
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA---HTFA 494
G LG + D +R V P SL ++ + ++Q SL N + A H+ A
Sbjct: 148 GSNVYGQLG---MGDHMLSRSTPVSEPSKQKSLDKL-QAIIQ-SLNNIVGIAAGYYHSLA 202
Query: 495 LTESGKLYAFGAGDKGQLGI 514
L ++GK++++G+G G+LGI
Sbjct: 203 LNDTGKIFSWGSGSWGKLGI 222
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 111/266 (41%), Gaps = 27/266 (10%)
Query: 267 SREGRVYTFSWGND--ARLGH---HTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 320
SREG Y +++G RLGH +T + HP + TL + VV IA G AL
Sbjct: 510 SREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALT 569
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVV---AAGAWHAAVV 376
VY+ G GKLG GS P I QL+ +L VV + G HAA
Sbjct: 570 ---DTGKVYTWGKSAQGKLGLGS----GKPLAIVVPQLVQDLSSHVVCQISLGRNHAACS 622
Query: 377 GQDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
+ WG +G LG H + P + +L + +A G + T + + G V
Sbjct: 623 TDMHKFFVWGSNTFGQLGIPHISSYMPD-PYEITSLREANIRSIACGGWHTLISTNTGSV 681
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
S G G LGH G+ + + + K++ E + + A
Sbjct: 682 MSCGKGWHGQLGH-------GDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAA 734
Query: 495 LTESGKLYAFGAGDKGQLGIELVNNQ 520
+T G+L+ +G GD+ QLG E N+
Sbjct: 735 ITNKGRLFTWGKGDEYQLGHESSKNE 760
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 10/230 (4%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE-EEWRPRPIRSLQGIRIIQAAAGAGRTM 210
AG HS A++ G ++ +G NS+GQLG GTT E P I +L G+ ++ + GA +
Sbjct: 1754 AGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSA 1812
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ F + G+ ++ V++L + +V A+ G TA +S+ G
Sbjct: 1813 VLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYG 1872
Query: 271 RVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS-GMAV 328
+ T+ G + +LG D+E L + N P+V++ G + ++ + MA
Sbjct: 1873 DLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAG 1932
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVG 377
Y GLG G+ SR E E L +QP +A G+ H A+VG
Sbjct: 1933 YESTIGLG---GNSSRRREFDVSFREVEGL--IQPTQIAVGSVHVLALVG 1977
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 144 RRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE--------EWRPRPIRSL 194
R N ++IA G H++ T+ G V S G GQLGHG E + + +
Sbjct: 658 REANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGF 717
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
I++ +AG + I++ G+++ +GK E + G + +K P+ VE I VV
Sbjct: 718 GDSFIVKVSAGKESSAAITNKGRLFTWGKGD--EYQLGHESSKNEAYPREVEFFAKIRVV 775
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL 298
+IG+ L G Y++ G+ +LGH + P P++
Sbjct: 776 DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPIM 820
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 16/289 (5%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
++ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V + A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + G L+N V IA G + ++A +G VY G G+LG GS
Sbjct: 162 SGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P I Q + +Q V A G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQPTPCRIAALQGIRVQRV--ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276
Query: 405 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 277 APVIVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 322
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 47/320 (14%)
Query: 106 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 143
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEP 65
Query: 144 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 252
L ++ + A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKV 182
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAA 311
V A G + + G VY + + + +LG + N +P P + L+ I V ++A
Sbjct: 183 AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVAC 240
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAG 369
GY + L L + VY+ G G+LG G+++++ +P ++E+ +++ +
Sbjct: 241 GYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPAPVIVEKDRIIE---IAACHS 294
Query: 370 AWHAAVVGQDGRVCTWGWGR 389
A +A Q G V WG R
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR 314
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N Q VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V L + A+++A G + V G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP + +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 175/383 (45%), Gaps = 43/383 (11%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
A AG HS+ S G V+++G+N+SGQLG+G + P ++ L+G+ + AAG
Sbjct: 203 ASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAV--AAGGLY 260
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G ++A+G + G+ G T ++S V L VV A G+ + +
Sbjct: 261 SLALRSDGTLWAWGSNDHGQRGDGS--TVYLSSSVRVRWLSG--VVAMAAGSAHSLAVRS 316
Query: 269 EGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+G ++ +WG + +LG T + P + G VV +AAG + +AL +
Sbjct: 317 DGTLW--AWGANYYGQLGDGTRKDHDTPKRVQGLSR---VVAVAAGDGHSIALCADGT-- 369
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G+L HGS D P + + + V VAAGA H+ V DG V WG
Sbjct: 370 -VWTWGYNHDGQLAHGSTNDSPVPLHVRELSGV----VAVAAGALHSLAVLSDGSVWAWG 424
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ R G LG G+ + P VQ L+ V A V+ G + DG V+++G LG
Sbjct: 425 YNRQGQLGDGSLSSSAEPVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLG 482
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+N L P V L V T S +N H+ A G L+A+G
Sbjct: 483 EGTT--------SNALVPVRVRGLSGVE--------TISAGFN-HSLARASDGGLWAWGG 525
Query: 507 GDKGQLGIELVNNQTERGNPERV 529
GQLG +N + P RV
Sbjct: 526 NYTGQLGDGTTSNSSV---PVRV 545
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 169/367 (46%), Gaps = 35/367 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +S+A+ S G ++++GSN GQ G G+T +R L G+ + AAG+ ++
Sbjct: 256 AGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLSGV--VAMAAGSAHSLA 313
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G ++A+G + +G+ G + K +P+ V+ L + V A G+ + L +G
Sbjct: 314 VRSDGTLWAWGANYYGQLGDGTR--KDHDTPKRVQGLSRVVAVAA--GDGHSIALCADGT 369
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+T+ + +D +L H + ND P PL E VV +AAG + LA+ S V++
Sbjct: 370 VWTWGYNHDGQLAHGST-ND-SPVPLH-VRELSGVVAVAAGALHSLAVLSDGS---VWAW 423
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG GS + P ++ + V+AG H+ G DG V WG +G
Sbjct: 424 GYNRQGQLGDGSLSSSAEPVRVQGLSGV----AAVSAGLNHSLARGTDGGVWAWGGNSFG 479
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G VP V+ L+ V+ I + G + + DG ++++G + LG +
Sbjct: 480 QLGEGTTSNALVPVRVRGLSGVETI--SAGFNHSLARASDGGLWAWGGNYTGQLGDGTTS 537
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
N P V L V ++ H+ A+ G ++A+G GQ
Sbjct: 538 --------NSSVPVRVQGLSGVAAVFAGLN---------HSLAVRTDGSVWAWGINSFGQ 580
Query: 512 LGIELVN 518
LG N
Sbjct: 581 LGEGTTN 587
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 182/383 (47%), Gaps = 45/383 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+++G N+ GQLG G+++ P +R L G ++ +AG G ++
Sbjct: 3 AGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSG--VVAVSAGEGHSLA 60
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G ++ G+ G + + P V L + V A G+ + L +G
Sbjct: 61 LHRDGTVWAWGDNALGQLGDGTSDSH--SEPVRVPGLSGVVAVSA--GDNHSLALRSDGS 116
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG P + + + LE++ VV +AAG + LA+ + V++
Sbjct: 117 VWAWGDNNSDQLG--GAPG-AQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADGT---VWA 170
Query: 331 VGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWG 388
G G+LG G+ T P+ Q+ L VV A+ W H+ V DG V WG
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPK-----QVQGLSGVVAASAGWAHSMVALSDGSVWAWGNN 225
Query: 389 RYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG+G + ++P+ VQ L V A VA G + + DG ++++G + H
Sbjct: 226 TSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSND-----H 278
Query: 448 NAIADGQGNRHANVLTPQLVTSLK-QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
DG T L +S++ + VV ++ +AH+ A+ G L+A+GA
Sbjct: 279 GQRGDGS--------TVYLSSSVRVRWLSGVVAMAAG-----SAHSLAVRSDGTLWAWGA 325
Query: 507 GDKGQLGIELVNNQTERGNPERV 529
GQLG + + P+RV
Sbjct: 326 NYYGQLGD---GTRKDHDTPKRV 345
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 22/298 (7%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHSIA+ + G V+++G N GQL HG+T + P +R L G ++ AAGA ++
Sbjct: 356 AGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSG--VVAVAAGALHSLA 413
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G + P V+ L + V A + + L+R
Sbjct: 414 VLSDGSVWAWGYNRQGQLGDGSLSSS--AEPVRVQGLSGVAAVSAGLNHS----LARGTD 467
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
++WG ++ +LG T N + P + G L + I+AG+ + LA A ++
Sbjct: 468 GGVWAWGGNSFGQLGEGTTSNALVPVRVRG-LSGVET--ISAGFNHSLARASDG---GLW 521
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G+ ++ P ++ + V AG H+ V DG V WG
Sbjct: 522 AWGGNYTGQLGDGTTSNSSVPVRVQGLSGV----AAVFAGLNHSLAVRTDGSVWAWGINS 577
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
+G LG G P VQ L+ ++ VA G + V DG ++S+G LGH
Sbjct: 578 FGQLGEGTTNTSFAPVRVQGLSGMET--VAAGSLHSLSVGSDGSMWSWGNNHHGQLGH 633
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 169/390 (43%), Gaps = 59/390 (15%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTM 210
AG HS+A+ S G V+++G N+S QLG + + P + L ++ AAG ++
Sbjct: 103 AGDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLS--EVVAVAAGGNHSL 160
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ G V+A+G + G+ G L T P+ V+ L VV A+ G + V
Sbjct: 161 AVRADGTVWAWGDNFAGQLG---DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALS 215
Query: 269 EGRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
+G V+ +WGN+ +G+ P V+ L G V+ +AAG Y LAL
Sbjct: 216 DGSVW--AWGNNTSGQLGNGISVGYGALPEQVQG--LRG------VMAVAAGGLYSLALR 265
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 379
+ A G HG R D L ++ L VV +AAG+ H+ V D
Sbjct: 266 SDGTLWAW--------GSNDHGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSD 317
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
G + WG YG LG G + PK VQ L+ V A VA GD + + DG V+++G
Sbjct: 318 GTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSRVVA--VAAGDGHSIALCADGTVWTWGY 375
Query: 440 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 499
L H + D H L+ + + + H+ A+ G
Sbjct: 376 NHDGQLAHGSTNDSPVPLHVRELSGVVAVAAGAL-----------------HSLAVLSDG 418
Query: 500 KLYAFGAGDKGQLGIELVNNQTERGNPERV 529
++A+G +GQLG +++ E P RV
Sbjct: 419 SVWAWGYNRQGQLGDGSLSSSAE---PVRV 445
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 20/247 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+AV S G V+++G N GQLG G+ P ++ L G+ + +AG ++
Sbjct: 406 AGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLSGVAAV--SAGLNHSLA 463
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
G V+A+G +SFG+ G LV P V L + + A F L+R
Sbjct: 464 RGTDGGVWAWGGNSFGQLGEGTTSNALV--PVRVRGLSGVETISAG----FNHSLARASD 517
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
++WG + +LG T N P + G V + AG + LA+ S V+
Sbjct: 518 GGLWAWGGNYTGQLGDGTTSNSSVPVRVQGL---SGVAAVFAGLNHSLAVRTDGS---VW 571
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G+ P ++ + VAAG+ H+ VG DG + +WG
Sbjct: 572 AWGINSFGQLGEGTTNTSFAPVRVQGLSGME----TVAAGSLHSLSVGSDGSMWSWGNNH 627
Query: 390 YGCLGHG 396
+G LGHG
Sbjct: 628 HGQLGHG 634
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 142/316 (44%), Gaps = 40/316 (12%)
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
AAG ++ + G V+A+G ++ G+ G + + P V L + V A G+
Sbjct: 2 AAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSH--SEPVRVRGLSGVVAVSAGEGHSL 59
Query: 263 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
L R+G V+ +WG++A +LG T + EP + G VV ++AG + LAL
Sbjct: 60 --ALHRDGTVW--AWGDNALGQLGDGTSDSHSEPVRVPGL---SGVVAVSAGDNHSLALR 112
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
S V++ G +LG G+ + + P +E + V VAAG H+ V
Sbjct: 113 SDGS---VWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLS----EVVAVAAGGNHSLAVRA 164
Query: 379 DGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG V WG G LG GN +PK VQ L+ V A + G + V DG V+++
Sbjct: 165 DGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAW 222
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G S LG N I+ G G P+ V L R V +Y + AL
Sbjct: 223 GNNTSGQLG-NGISVGYG------ALPEQVQGL-----RGVMAVAAGGLY----SLALRS 266
Query: 498 SGKLYAFGAGDKGQLG 513
G L+A+G+ D GQ G
Sbjct: 267 DGTLWAWGSNDHGQRG 282
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+AAG H+ + DG V WG G LG G+ + S P V+ L+ V A V+ G+ +
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSGVVA--VSAGEGHS 58
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTN 484
+ DG V+++G LG DG + H+ V P L VV +S +
Sbjct: 59 LALHRDGTVWAWGDNALGQLG-----DGTSDSHSEPVRVPGL--------SGVVAVSAGD 105
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ H+ AL G ++A+G + QLG
Sbjct: 106 N-----HSLALRSDGSVWAWGDNNSDQLG 129
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 31/340 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ S G ++++G N GQLG +T + P + +L + +AG ++ +
Sbjct: 687 GENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLAL 744
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+AFG + +G+ G ++ +P V+ L + + A G F+ L +G V
Sbjct: 745 KSDGTVWAFGYNGYGQLGDGTTSSQR--TPVQVKDLTGVVAIAA--GKDFSLALKSDGTV 800
Query: 273 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ SWG + LG+ T P + + V IAAG + +AL S V++
Sbjct: 801 W--SWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFA 852
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG+ S + P Q + ++ + AAG +H + DG V +WG+ Y
Sbjct: 853 WGYNGNGELGNSSTISQSTPV---QSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGY 907
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG+GN SVP + L + +I A G+ + DG +YS+G + LG+
Sbjct: 908 GQLGNGNNTSRSVPAAIPGLASIASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTT 965
Query: 451 AD--------GQGNRHANVLTPQLVTSLKQVNERVVQISL 482
D G A+ P V+ L+ ++ V ++L
Sbjct: 966 VDTNVPHKVIGPNINPADTTAPAAVSDLRVSSQNVRSLTL 1005
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 161/361 (44%), Gaps = 42/361 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ + S G V+ +G N GQLG GT+ P + +L G+++I A G T+ +
Sbjct: 640 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 697
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G ++ +G + +G + G T SP V +L N V A G + L +G V+ F
Sbjct: 698 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 753
Query: 276 SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ +LG T + P L G VV IAAG + LAL + V+S G
Sbjct: 754 GYNGYGQLGDGTTSSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGT---VWSWG 804
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG+G+ T P ++ L +++ +AAG +H + +DG V WG+ G
Sbjct: 805 QNTYGELGNGTTTRSSVP--VQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYNGNGE 860
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG+ + +S P V + +K I A G Y T + DG V+S+G LG+
Sbjct: 861 LGNSSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQLGN----- 912
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
GN + + P + L + + + A G LY++G GQL
Sbjct: 913 --GNNTSRSV-PAAIPGLASIASIAAGEN---------QSIAYGNDGILYSWGRNANGQL 960
Query: 513 G 513
G
Sbjct: 961 G 961
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 17/256 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V++FG N GQLG GTT + P ++ L G+ I AAG ++
Sbjct: 736 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAI--AAGKDFSLA 793
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+++G++++GE G T + P V L ++ + A G++ L ++G
Sbjct: 794 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 849
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + + LG+ + + + P+ + I IAAG + LAL + V+S
Sbjct: 850 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALKSDGT---VWSW 902
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG+G+ T P I + +AAG + G DG + +WG G
Sbjct: 903 GYNGYGQLGNGNNTSRSVPAAIPGLASI----ASIAAGENQSIAYGNDGILYSWGRNANG 958
Query: 392 CLGHGNEECESVPKVV 407
LG+G +VP V
Sbjct: 959 QLGNGTTVDTNVPHKV 974
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 31/185 (16%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G+ + P L P+ V+ H + DG V WG+ +G LG G
Sbjct: 610 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNST 669
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
SVP V L +K I A G+ T + DG ++++G LG D R++ V
Sbjct: 670 SVPGKVINLTGMKMI--AGGENHTVALRSDGTLHTWGYNGYGQLGD----DSTTTRYSPV 723
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNA------HTFALTESGKLYAFGAGDKGQLGIE 515
QV+ +LTN W A H+ AL G ++AFG GQLG
Sbjct: 724 ----------QVS------TLTN---WTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDG 764
Query: 516 LVNNQ 520
++Q
Sbjct: 765 TTSSQ 769
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G ++++G N GQLG G P+ + L GI + Q +AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEA 201
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M +S +G +Y++GK+ FG+ G+ T+ SP L+E+L N V A G TA+L+
Sbjct: 202 HSMALSMSGNIYSWGKNEFGQL--GLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLG--K 316
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
V+S G G G+LG+G D+ P
Sbjct: 317 VFSFGSGKEGQLGNGGTRDQLIP 339
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 137/281 (48%), Gaps = 34/281 (12%)
Query: 235 GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 294
G+ + +P+ ++ KN+ + +G +LS G+ + + D H +
Sbjct: 81 GSDGLRTPKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEY----DNYSMKHLRFESI-- 134
Query: 295 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLI 353
L+ ++QI G + LAL+ G +++ G L G+LG G + P+++
Sbjct: 135 ------LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIV 185
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E + L + +AG H+ + G + +WG +G LG + E + P +++AL++
Sbjct: 186 EHLSGIPLAQI--SAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQ 243
Query: 414 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 473
K +A G T ++++DG +++FG G+ LGHN+ N L P LV L
Sbjct: 244 KVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--A 293
Query: 474 NERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 513
RV QI+ W HT A +++ GK+++FG+G +GQLG
Sbjct: 294 GNRVTQIACGR---W--HTLAYVSDLGKVFSFGSGKEGQLG 329
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ I+ + ++I GA +++S G+ + EY K + +++
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSGGKPF----------EYDNYSMKHLRFESILQE 137
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENI 304
K ++Q G++ + LS+ G + F+WG + +LG + P+ P ++ L I
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLSGI 191
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
P+ QI+AG + +AL+ + +YS G G+LG + P LIE L N +
Sbjct: 192 PLAQISAGEAHSMALSMSGN---IYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G H A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306
Query: 425 TFV-VSEDGDVYSFGCGESASLGHNAIAD 452
T VS+ G V+SFG G+ LG+ D
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 25/256 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H + ++S G + + + S L + LQ +IIQ G ++ +
Sbjct: 105 GADHMLILSSGGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S G+++A+G++ G+ G + T+PQ+VE L I + Q + G + LS G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNI 212
Query: 273 YTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
Y SWG + +LG HTE D L+ L+N V +A G + AL Q ++
Sbjct: 213 Y--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLACGGSH-TALLTQDG--LLF 265
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S +E P L+ +L + +A G WH A V G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVA--ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSG 323
Query: 389 RYGCLGHGNEECESVP 404
+ G LG+G + +P
Sbjct: 324 KEGQLGNGGTRDQLIP 339
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS+A++ G +YS+G N GQLG TE + P I +L ++ A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T L++ G ++ FG G+ G T+ P LV L V Q A G + T A +
Sbjct: 254 HTALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV 311
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
S G+V++F G + +LG+ + + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
GGK KH R Q + + + G +H+ + + G + WG +G LG
Sbjct: 115 GGKPFEYDNYSMKHLRFESILQ--EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGV 172
Query: 396 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAIAD 452
G + + P++V+ L+ + ++ G+ + +S G++YS+G E LG H D
Sbjct: 173 GRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKD 232
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
+P L+ +L N++V ++ S HT LT+ G L+ FGAG GQL
Sbjct: 233 ----------SPSLIEALD--NQKVEFLACGGS-----HTALLTQDGLLFTFGAGKHGQL 275
Query: 513 GIELVNNQ 520
G N+
Sbjct: 276 GHNSTQNE 283
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 211
G H+ +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAY 310
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
+SD G+V++FG G+ G +L+ P V S +++
Sbjct: 311 VSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDL 350
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS+ +T+ G +SFGSN GQLGHG T+ PR +++L+ R I A G T++
Sbjct: 50 GDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVA 109
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+D +VYAFG +S E + GV+ + PQLV +L + V G + LS +G
Sbjct: 110 TDDKKVYAFGINS--EHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGI 167
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
VY + +LG + P L + I + A Y+ + +Y+
Sbjct: 168 VYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAYV------NTDGVLYTF 221
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGR 389
G GKLG T+ + + ++ ++Q +V VA G H + DGR ++G G
Sbjct: 222 GETEHGKLG----TNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGS 277
Query: 390 YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LG G + P ++Q VK V+ G T +SE +Y+ CGE H
Sbjct: 278 QGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYT--CGEGR---HG 332
Query: 449 AIADGQGNRHANVLTPQLVT--SLKQVNE 475
+A G +N +P LV SL QV +
Sbjct: 333 KLALEDGEMGSNKFSPMLVDILSLFQVQQ 361
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 43/343 (12%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+I A G ++ I+ +G+ ++FG + +G+ +G TK + +P+ V++LK+ + A
Sbjct: 44 VISVACGDQHSVFITASGRTFSFGSNDYGQLGHG--HTKALVNPRCVKALKDKRAILVAC 101
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAG 312
G T V + + +VY F ++ +LG +H +P L+ TL + V + AG
Sbjct: 102 GRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQ------LVATLNGVQVKALTAG 155
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ LAL+ + VY G G+LG G + K P ++ + + ++AGA+H
Sbjct: 156 ADHSLALSAKG---IVYLWGSSEHGQLGLGRKKQRKLPVQLKT----EGKAIAISAGAYH 208
Query: 373 AAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKV--VQALNDVKAIHVATGDYTTFVV 428
+A V DG + T+G +G LG ++C KV +Q L VA G T +
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL----VTSVACGGSHTVAL 264
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
+ DG YSFG G L G G R + P L+ V ++ ++S S
Sbjct: 265 TCDGRAYSFGDGSQGQL-------GLGQRVTHAGRPHLIQMPTGV--KMARVSAGQS--- 312
Query: 489 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
HT L+E ++Y G G G+L +E + + +P VDI
Sbjct: 313 --HTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDI 353
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 36/304 (11%)
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I + G V+ FGK F + + GT V KN V+ A G+ + ++ GR
Sbjct: 15 IPELGAVFTFGKSKFSD---NLPGTFWV---------KNDAVISVACGDQHSVFITASGR 62
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
++F + +LGH V P + L++ + +A G + L VY+
Sbjct: 63 TFSFGSNDYGQLGHGHTKALVNPR-CVKALKDKRAILVACGRSHTLVAT---DDKKVYAF 118
Query: 332 GCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G +LG S P+L+ L +Q + AGA H+ + G V WG +
Sbjct: 119 GINSEHQLGVKSSAAYHADPQLVAT--LNGVQVKALTAGADHSLALSAKGIVYLWGSSEH 176
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G ++ +P VQ + KAI ++ G Y + V+ DG +Y+FG E LG N
Sbjct: 177 GQLGLGRKKQRKLP--VQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTN-- 232
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
L P+ +V + +Q +T+ +HT ALT G+ Y+FG G +G
Sbjct: 233 -----------LAPKKCRKPSKVPD--IQGLVTSVACGGSHTVALTCDGRAYSFGDGSQG 279
Query: 511 QLGI 514
QLG+
Sbjct: 280 QLGL 283
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 22/233 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+++KG+VY +GS+ GQLG G ++ R P++ + I +AGA +
Sbjct: 154 AGADHSLALSAKGIVYLWGSSEHGQLGLG--RKKQRKLPVQLKTEGKAIAISAGAYHSAY 211
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLV----TSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ G +Y +FGE E+G GT L P V ++ + V A G T L+
Sbjct: 212 VNTDGVLY-----TFGETEHGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALT 265
Query: 268 REGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 326
+GR Y+F G+ +LG PH L+ + + +++AG + L+ G
Sbjct: 266 CDGRAYSFGDGSQGQLGLGQRVTHAGRPH-LIQMPTGVKMARVSAGQSHTAFLS---EGR 321
Query: 327 AVYSVGCGLGGKLG--HGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
+Y+ G G GKL G K P L++ L +Q V+ G H V+
Sbjct: 322 QMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQ--VSCGGCHTLVL 372
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 67/383 (17%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V G VY+ G N GQLGH + + +P + +L I+ + G T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQ---LVESLKNIFVVQAAIGNFFTAVLSR 268
+D GQVYA+G DS G+ G+ G++ + P+ + KNI + + SR
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRKSIFMPVDKNIRIKECK------KTASR 151
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+ V T +++ P L + V S V
Sbjct: 152 KSWVSTLC-------------SELAPDSHLAESGQVAV-----------------SASEV 181
Query: 329 YSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+ G G+LG G ++ P+LI+ LL + + VAAG H+ V+ G + WG
Sbjct: 182 FCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 239
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
++G LG +E VP ++++L K +++ G+ T ++++G V++FG G LGH
Sbjct: 240 NKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 299
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGA 506
N+ + R L +VT QI+ HT A SG++Y+FG
Sbjct: 300 NSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFVPSSGRIYSFGL 344
Query: 507 GDKGQLGIELVNNQ----TERGN 525
G GQLG +N+ T +GN
Sbjct: 345 GGNGQLGTGSTSNRKSPFTVKGN 367
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 18/248 (7%)
Query: 106 KRAIFKPMTEAERQDLKQKCGG--SWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSK 163
+++IF P+ + R +K SW L C +A G +AV S
Sbjct: 129 RKSIFMPVDKNIRIKECKKTASRKSWVSTL--------CSELAPDSHLAESGQ-VAV-SA 178
Query: 164 GVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
V+ +G N GQLG G +++ P+ I+SL GI +Q AAG + +++ +G ++ +G
Sbjct: 179 SEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 238
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
++ FG+ + + V P L++SL++ +V G TA L++EG V+TF G +
Sbjct: 239 RNKFGQLGLNDENDRYV--PYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 296
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
LGH++ +++ P + + +I V QIA G + A PS +YS G G G+LG G
Sbjct: 297 LGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTG 353
Query: 343 SRTDEKHP 350
S ++ K P
Sbjct: 354 STSNRKSP 361
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS +T G ++ +G N GQLG + + P ++SL+ +I+ G
Sbjct: 217 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDH 276
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 277 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 334
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
GR+Y+F G + +LG + N P + G
Sbjct: 335 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 366
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 92/219 (42%), Gaps = 35/219 (15%)
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 385
VY+ GC G+LGH EK + EQ L+ Q +V V+ G H + G+V W
Sbjct: 54 TVYTCGCNDLGQLGH-----EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAW 108
Query: 386 GWGRYGCLG-HGNEECESVPKVVQALNDVKAIHV----ATGDYTTFV------------V 428
G G LG G+EEC VP+ + K I + T ++V +
Sbjct: 109 GLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHL 168
Query: 429 SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
+E G V + E G N G G +PQL+ SL + I
Sbjct: 169 AESGQV-AVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL-------LGIPFMQVAA 220
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 526
AH+F LT SG ++ +G GQLG+ N++ +R P
Sbjct: 221 GGAHSFVLTLSGAIFGWGRNKFGQLGL---NDENDRYVP 256
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 385 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
WG +G LG G +EE P+ + K V G T V +DG VY+ GC +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH + +R P+ V +L N +V +S AHT AL + G++Y
Sbjct: 64 GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCGE-----AHTLALNDKGQVY 106
Query: 503 AFGAGDKGQLGI 514
A+G GQLG+
Sbjct: 107 AWGLDSDGQLGL 118
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 337 GKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G +E PR + F +N + V G H V DG V T G G LG
Sbjct: 10 GQLGLGGIDEEIVLEPRKSDFF--INKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG 67
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
H E+ P+ V AL+ + V+ G+ T +++ G VY++G LG
Sbjct: 68 H--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 175/374 (46%), Gaps = 43/374 (11%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLQGIRIIQAAAGAGRT 209
+AG HS+ + + G V+S+G N GQLG GT + R P+R + + A+G +
Sbjct: 354 VAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQP--RMSPVRVATTTLGNPGVASGQLHS 411
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ AG+V+++G + G+ G+ KL +P L + VV GN T VL +
Sbjct: 412 VYRDSAGRVWSWGDNEDGQLGNGIGADKL--TPALTGLTGAVSVVA---GNRHTVVL--K 464
Query: 270 GRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G ++WG ++R +G T N +P +LG L I I+AG + LAL +
Sbjct: 465 GDTTVWAWGVNSRGEVGDGTNANTSQPVRVLG-LSGI--TAISAGAYHSLALRTDGT--- 518
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
V++ G G+LG+G D+ P Q+ L V +AAG H+ + DG V WG
Sbjct: 519 VWAWGFNRYGQLGNGGTVDQNQP-----VQVAGLSGVTAIAAGHSHSLALCGDGTVWAWG 573
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ G +G G +P L+ V AI G Y + + DG V+S+G S LG
Sbjct: 574 YNFDGQIGSGTNNWHILPVQAVGLSSVTAI--TAGGYHSLALRSDGTVWSWGYNGSGQLG 631
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ A+A ++ P V++L V +S+ Y H+ AL G + A+G
Sbjct: 632 NGALA--------SLNAPGPVSNLTGV------VSIAAGDY---HSLALRSDGTVRAWGF 674
Query: 507 GDKGQLGIELVNNQ 520
GQ+G + N+
Sbjct: 675 NFDGQIGDGSLTNR 688
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 170/378 (44%), Gaps = 43/378 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ S G V+S+G N GQLG+G ++ P + L G + AG T+++
Sbjct: 410 HSVYRDSAGRVWSWGDNEDGQLGNGIGADKLTP-ALTGLTGA--VSVVAGNRHTVVLKGD 466
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
V+A+G +S GE GT TS P V L I + A G + + L +G V+
Sbjct: 467 TTVWAWGVNSRGEVG---DGTNANTSQPVRVLGLSGITAISA--GAYHSLALRTDGTVWA 521
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ + +LG+ + +P + G V IAAG+ + LAL + V++ G
Sbjct: 522 WGFNRYGQLGNGGTVDQNQPVQVAGLSG---VTAIAAGHSHSLALCGDGT---VWAWGYN 575
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G++G G T+ H I Q + L V + AG +H+ + DG V +WG+ G L
Sbjct: 576 FDGQIGSG--TNNWH---ILPVQAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQL 630
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G+G + P V L V + +A GDY + + DG V ++G +G ++
Sbjct: 631 GNGALASLNAPGPVSNLTGV--VSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLT-- 686
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
NRH P +V + V + + H+ A+ G +A+GA +GQLG
Sbjct: 687 --NRH----VPVMVAGMSGVVSVIAG---------DHHSMAMRSDGTTWAWGANTEGQLG 731
Query: 514 IELVNNQTERGNPERVDI 531
N+ P RV++
Sbjct: 732 DGTRNDSII---PVRVEL 746
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 134 RFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS 193
R LAG A R + G HS+ V S G V+++G N GQLG+G P P++
Sbjct: 43 RAALAGRASVARLS----LGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNS--PTPVKV 96
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
+ A+G ++ + G V+A+G + G + G T + P V+ L +
Sbjct: 97 KNLTDAVAVASGDSHSLALRSDGTVWAWGDNYSG--QLGTGSTAVSAEPVQVQGLSGVLS 154
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP--HPLLGTLENIPVVQI 309
V A G +A L +G V+ +WG++ +LG T + P P LG V+ +
Sbjct: 155 V--ASGFAHSAALRSDGTVW--AWGDNRYRQLGPLTAGSSSVPVQVPGLG-----GVIAV 205
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAA 368
AAG LAL + V++ G G+LG G+ T +P Q+L L VV ++A
Sbjct: 206 AAGGNTTLALRADGT---VWAWGDNRSGQLGDGTVTTRGNP-----LQVLGLTGVVTLSA 257
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
GA H + +G TWG G LG G SVP V L DV A G+Y + V
Sbjct: 258 GASHCVALRSNGTAWTWGLNTMGQLGDGTTTQRSVPAQV-GLTDVMA--AVAGNYHSLAV 314
Query: 429 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 488
DG V+++G LG+ GN +++L +Q L+ I
Sbjct: 315 RSDGAVWAWGDNRYRQLGN-------GNMTSSLLP--------------IQAGLSGGITL 353
Query: 489 NA---HTFALTESGKLYAFGAGDKGQLG 513
A H+ L G ++++G GQLG
Sbjct: 354 VAGFKHSLTLRADGTVWSWGDNVFGQLG 381
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 42/367 (11%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRT 209
A+AG HS+AV S G V+++G N QLG+G P GI ++ AG +
Sbjct: 304 AVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGLSGGITLV---AGFKHS 360
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
+ + G V+++G + FG+ G ++ +L N V A G +
Sbjct: 361 LTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNPGV---ASGQLHSVYRDSA 417
Query: 270 GRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
GRV+ SWG+ D +LG+ + + P L G + VV AG + + L +
Sbjct: 418 GRVW--SWGDNEDGQLGNGIGADKLTP-ALTGLTGAVSVV---AGNRHTVVLKGDTT--- 468
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
V++ G G++G G+ + P ++L L + ++AGA+H+ + DG V WG
Sbjct: 469 VWAWGVNSRGEVGDGTNANTSQP-----VRVLGLSGITAISAGAYHSLALRTDGTVWAWG 523
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+ RYG LG+G ++ P V L+ V AI A G + + DG V+++G +G
Sbjct: 524 FNRYGQLGNGGTVDQNQPVQVAGLSGVTAI--AAGHSHSLALCGDGTVWAWGYNFDGQIG 581
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G N H + P L V ++T Y H+ AL G ++++G
Sbjct: 582 -----SGTNNWH---ILPVQAVGLSSVT------AITAGGY---HSLALRSDGTVWSWGY 624
Query: 507 GDKGQLG 513
GQLG
Sbjct: 625 NGSGQLG 631
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 166/364 (45%), Gaps = 40/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
+G HS+A+ S G V+++G N SGQLG G+T P ++ L G ++ A+G +
Sbjct: 107 SGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGLSG--VLSVASGFAHSAA 164
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + + + G+ V P V L + V A G T L +G
Sbjct: 165 LRSDGTVWAWGDNRYRQLGPLTAGSSSV--PVQVPGLGGVIAVAA--GGNTTLALRADGT 220
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T P +LG VV ++AG + +AL + +G A +
Sbjct: 221 VW--AWGDNRSGQLGDGTVTTRGNPLQVLGL---TGVVTLSAGASHCVAL--RSNGTA-W 272
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
+ G G+LG G+ T P Q L ++ V AG +H+ V DG V WG R
Sbjct: 273 TWGLNTMGQLGDGTTTQRSVP---AQVGLTDVMAAV--AGNYHSLAVRSDGAVWAWGDNR 327
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
Y LG+GN +P +QA I + G + + DG V+S+G LG
Sbjct: 328 YRQLGNGNMTSSLLP--IQA-GLSGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLG--- 381
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG + ++P V + N V L H+ +G+++++G +
Sbjct: 382 --DGT---YQPRMSPVRVATTTLGNPGVASGQL--------HSVYRDSAGRVWSWGDNED 428
Query: 510 GQLG 513
GQLG
Sbjct: 429 GQLG 432
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 139/297 (46%), Gaps = 20/297 (6%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM 210
+AG H++ + V+++G NS G++G GT +P + L GI I +AGA ++
Sbjct: 454 VAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANTSQPVRVLGLSGITAI--SAGAYHSL 511
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ G V+A+G + +G+ G GT P V L + + A G+ + L +G
Sbjct: 512 ALRTDGTVWAWGFNRYGQLGNG--GTVDQNQPVQVAGLSGVTAIAA--GHSHSLALCGDG 567
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + D ++G T + P +G V I AG + LAL + V+S
Sbjct: 568 TVWAWGYNFDGQIGSGTNNWHILPVQAVGLSS---VTAITAGGYHSLALRSDGT---VWS 621
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG+G+ P + NL VV +AAG +H+ + DG V WG+
Sbjct: 622 WGYNGSGQLGNGALASLNAPGPVS-----NLTGVVSIAAGDYHSLALRSDGTVRAWGFNF 676
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ VP +V ++ V + V GD+ + + DG +++G LG
Sbjct: 677 DGQIGDGSLTNRHVPVMVAGMSGV--VSVIAGDHHSMAMRSDGTTWAWGANTEGQLG 731
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 18/258 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G N GQLG+G T ++ +P + L G+ I AAG ++
Sbjct: 505 AGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVAGLSGVTAI--AAGHSHSLA 562
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G+ G ++ P L ++ + A G + + L +G
Sbjct: 563 LCGDGTVWAWGYNFDGQIGSGTNNWHIL--PVQAVGLSSVTAITA--GGYHSLALRSDGT 618
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYS 330
V+++ + +LG+ + P P+ N+ VV IAAG + LAL + V +
Sbjct: 619 VWSWGYNGSGQLGNGALASLNAPGPV----SNLTGVVSIAAGDYHSLALRSDGT---VRA 671
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G++G GS T+ P ++ + V V AG H+ + DG WG
Sbjct: 672 WGFNFDGQIGDGSLTNRHVPVMVAGMSGV----VSVIAGDHHSMAMRSDGTTWAWGANTE 727
Query: 391 GCLGHGNEECESVPKVVQ 408
G LG G +P V+
Sbjct: 728 GQLGDGTRNDSIIPVRVE 745
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ G V+++G N GQ+G GT W P++++ + AG ++
Sbjct: 555 AGHSHSLALCGDGTVWAWGYNFDGQIGSGT--NNWHILPVQAVGLSSVTAITAGGYHSLA 612
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+++G + G+ G + + +P V +L VV A G++ + L +G
Sbjct: 613 LRSDGTVWSWGYNGSGQLGNGALAS--LNAPGPVSNLTG--VVSIAAGDYHSLALRSDGT 668
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V + + D ++G + N P + G VV + AG + +A+ + ++
Sbjct: 669 VRAWGFNFDGQIGDGSLTNRHVPVMVAGMSG---VVSVIAGDHHSMAMRSDGT---TWAW 722
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQF 356
G G+LG G+R D P +E F
Sbjct: 723 GANTEGQLGDGTRNDSIIPVRVELF 747
>gi|118373349|ref|XP_001019868.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89301635|gb|EAR99623.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 403
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 28/303 (9%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
A++SK +Y++G + + GH + P+ I +LQ I + + G + +++ Q
Sbjct: 72 AISSKNELYTWGETKNSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQ 129
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+Y G + +G G+ G + QL +++KNI + + G+ F+ L +VY+ +
Sbjct: 130 LYVTGHNKYGAC--GISGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDINQQVYSSGF 187
Query: 278 GNDARLGHHTEPNDVEPHPL--LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
H D + + + LE I + I AG+C+ A+ Q G VY+ G G
Sbjct: 188 RQ-----MHGNKEDQHQYQIKKIKELEGIAIKHINAGFCHS-AVVTQERG-EVYTWGSGN 240
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCL 393
+LGHG+ +K P I L ++ V + G H DG+V +WG G G L
Sbjct: 241 FYQLGHGNTKSQKTPLKINN--LSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKL 298
Query: 394 GHGNEEC------ESVPKVVQALNDVKAIHVA---TGDYTTFVVSEDGDVYSFGCGESAS 444
GH N ES P+ +Q L + K I +A +G + V+S+DG +++FGCG
Sbjct: 299 GHQNSWSHEDPADESRPRPIQYLQE-KGIVIAKSISGGIHSAVLSQDGRLFTFGCGSDGR 357
Query: 445 LGH 447
LGH
Sbjct: 358 LGH 360
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 26/355 (7%)
Query: 164 GVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G +Y++G NSSG L + ++ E P +++ Q + + G IS ++Y +G
Sbjct: 26 GFLYTWGKNSSGCLANQKEDQGEIIPFKVKTNQKFKSVSTGGFFGAA--ISSKNELYTWG 83
Query: 223 KDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
+ + G Q K + PQ + +L+NI V + GN+ L+ + ++Y
Sbjct: 84 ETK--NSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQLYVTGHNKYG 139
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
G + +++ L T++NI + I+AG + L L VYS G + H
Sbjct: 140 ACGI-SGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDIN---QQVYSSGF----RQMH 191
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEEC 400
G++ D+ ++ + +L + + AG H+AVV Q+ G V TWG G + LGHGN +
Sbjct: 192 GNKEDQHQYQIKKIKELEGIAIKHINAGFCHSAVVTQERGEVYTWGSGNFYQLGHGNTKS 251
Query: 401 ESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 458
+ P + L+ ++ + + G+ T S DG VYS+G G LGH +
Sbjct: 252 QKTPLKINNLSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKLGHQNSWSHE--DP 309
Query: 459 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
A+ P+ + L++ I + SI H+ L++ G+L+ FG G G+LG
Sbjct: 310 ADESRPRPIQYLQEKG-----IVIAKSISGGIHSAVLSQDGRLFTFGCGSDGRLG 359
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 26/300 (8%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H +A+ ++ +Y G N G G +E + +++ I+I +AG G
Sbjct: 112 SHVSCGNWHCLALNNQNQLYVTGHNKYGACGISGIDEINGFQLNDTIKNIQICSISAGDG 171
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ + QVY+ G +G + + + ++ L+ I + G +AV++
Sbjct: 172 FSLYLDINQQVYSSGFRQM----HGNKEDQHQYQIKKIKELEGIAIKHINAGFCHSAVVT 227
Query: 268 RE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCYLLALACQPS 324
+E G VYT+ GN +LGH + P + L I V + G YC+ A + S
Sbjct: 228 QERGEVYTWGSGNFYQLGHGNTKSQKTPLKI-NNLSGIEQVSCSRGEKYCHTTATS---S 283
Query: 325 GMAVYSVGCGLGGKLGHGSR------TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
VYS G G GKLGH + DE PR I+ Q + +G H+AV+ Q
Sbjct: 284 DGKVYSWGSGYKGKLGHQNSWSHEDPADESRPRPIQYLQEKGIVIAKSISGGIHSAVLSQ 343
Query: 379 DGRVCTWGWGRYGCLGHGNEEC------ESVPKVVQA--LNDVKAIHVATGDYTTFVVSE 430
DGR+ T+G G G LGH E E P+ +Q LN+ K I + Y ++E
Sbjct: 344 DGRLFTFGCGSDGRLGHIEAEKYVYLYREPFPREIQGPFLNN-KIIDACSSYYFMAAIAE 402
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 378 QDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 436
QDG + TWG GCL + E+ E +P V+ K+ V+TG + +S ++Y+
Sbjct: 24 QDGFLYTWGKNSSGCLANQKEDQGEIIPFKVKTNQKFKS--VSTGGFFGAAISSKNELYT 81
Query: 437 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
+G +++ GH Q N++ +L PQ + +L + + +S N W H AL
Sbjct: 82 WGETKNSRNGH------QANKNY-ILVPQKIMNL----QNISHVSCGN---W--HCLALN 125
Query: 497 ESGKLYAFGAGDKGQLGIELVN 518
+LY G G GI ++
Sbjct: 126 NQNQLYVTGHNKYGACGISGID 147
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 22/314 (7%)
Query: 158 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
+ +T G +Y FG+N GQLG G + +P ++ L+ +++ A G T+ ++
Sbjct: 43 VVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRH 102
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 277
+++FG + GE + GV +K +P+++E L+ + + G +A L+ G +Y +
Sbjct: 103 LHSFG--AGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGG 160
Query: 278 GNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G++ +LGH + P L +G +PV ++ GY Y AL + + + G G
Sbjct: 161 GSEGQLGHGEDTEVQIPRELSMG----VPVRMVSCGY-YHTALLTEDKKLYTFGEGEGGK 215
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
LG P+ + F +PV V+ G H A + + G V T+G G G LGH
Sbjct: 216 LGLGEAHLGGVNEPQHVSFF----TEPVDSVSCGNAHTAAITEKGHVYTFGNGASGQLGH 271
Query: 396 GNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G + E+ +PK V L + V+ GD T +V+ G +Y+FG G L GQ
Sbjct: 272 GPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKL-------GQ 324
Query: 455 GNRH-ANVLTPQLV 467
G +NV TP V
Sbjct: 325 GEESFSNVFTPSKV 338
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 28/256 (10%)
Query: 261 FFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
FF V++ GR+Y F WG LGH N +P + G L++ VV+IA G + +
Sbjct: 40 FFDVVITENGRLYVFGANDWGQLG-LGHRKSVN--KPSSVKG-LKHAGVVKIACGRVHTI 95
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL ++S G G G+LG G + PR+IE+ + + ++++ G H+A +
Sbjct: 96 ALT---KDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDY--LLLSCGTDHSAALT 150
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
G + WG G G LGHG + +P+ + V+ V+ G Y T +++ED +Y+F
Sbjct: 151 ASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRM--VSCGYYHTALLTEDKKLYTF 208
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G GE LG G V PQ V+ E V +S NAHT A+TE
Sbjct: 209 GEGEGGKLGLGEAHLG------GVNEPQHVSFF---TEPVDSVSC-----GNAHTAAITE 254
Query: 498 SGKLYAFGAGDKGQLG 513
G +Y FG G GQLG
Sbjct: 255 KGHVYTFGNGASGQLG 270
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++I++ G++Y FG + +G+ G+ K V P V+ LK+ VV+ A G T L+++
Sbjct: 43 VVITENGRLYVFGANDWGQ--LGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKD 100
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
+++F G + +LG P ++ LE + ++ G + AL SG +Y
Sbjct: 101 RHLHSFGAGGEGQLGVGDSKQYEAPR-MIEELEEQDYLLLSCGTDHSAALTA--SG-TLY 156
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 389
G G G+LGHG T+ + PR + + + +V+ G +H A++ +D ++ T+G G
Sbjct: 157 MWGGGSEGQLGHGEDTEVQIPRELS----MGVPVRMVSCGYYHTALLTEDKKLYTFGEGE 212
Query: 390 YGC-------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 442
G LG NE P+ V + V+ G+ T ++E G VY+FG G S
Sbjct: 213 GGKLGLGEAHLGGVNE-----PQHVSFFTE-PVDSVSCGNAHTAAITEKGHVYTFGNGAS 266
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH G H P+ V L+ + V + HT +T G LY
Sbjct: 267 GQLGH-------GPDHLETNIPKRVARLEWTRCKWVSCG-------DCHTAIVTAKGCLY 312
Query: 503 AFGAGDKGQLG 513
FG G G+LG
Sbjct: 313 TFGDGRHGKLG 323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H+IA+T ++SFG+ GQLG G +++ PR I L+ + + G + ++ +
Sbjct: 93 HTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALTAS 152
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGRVYT 274
G +Y +G S G+ +G T Q+ L + V + G + TA+L+ + ++YT
Sbjct: 153 GTLYMWGGGSEGQLGHGED-----TEVQIPRELSMGVPVRMVSCGYYHTALLTEDKKLYT 207
Query: 275 F-------SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
F +A LG EP V + PV ++ G + A+ +
Sbjct: 208 FGEGEGGKLGLGEAHLGGVNEPQHV-------SFFTEPVDSVSCGNAHTAAITEK---GH 257
Query: 328 VYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VY+ G G G+LGHG E + P+ + + + + V+ G H A+V G + T+G
Sbjct: 258 VYTFGNGASGQLGHGPDHLETNIPKRVARLEWTRCK--WVSCGDCHTAIVTAKGCLYTFG 315
Query: 387 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFV 427
GR+G LG G E +V P V N V+ G T V
Sbjct: 316 DGRHGKLGQGEESFSNVFTPSKVHRFNGFLVEEVSCGGCHTLV 358
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
+ V++E+G +Y FG + LG G+R + V P V LK VV+I+
Sbjct: 40 FFDVVITENGRLYVFGANDWGQLG-------LGHRKS-VNKPSSVKGLKHAG--VVKIAC 89
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
HT ALT+ L++FGAG +GQLG+
Sbjct: 90 -----GRVHTIALTKDRHLHSFGAGGEGQLGV 116
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 18/300 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ + G + S G N GQLG + I SL+ I+ + G ++ +
Sbjct: 42 GEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSIEQ--ISSLEAQTIVDISCGTNHSVAV 99
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
SD G +Y++G S G+ G ++ T P+ + L N ++Q + GNF + LS +GRV
Sbjct: 100 SDEGSIYSWGDGSEGQLGTGNLSSRNFT-PKKITGLFNTKIIQISCGNFHSLALSEDGRV 158
Query: 273 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
FSWG + +LG ++ + L+ +L+ IP+VQ+ AG AL+ SG V++
Sbjct: 159 --FSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSM--SG-TVFA 213
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG S + + L NL ++ G H AV+ +DG V T+G +
Sbjct: 214 WGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTH 273
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG + SVP+ ++ + VA G Y T +Y F C S G ++
Sbjct: 274 GQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTL-------LYVFSCNRIVSFGKGSL 325
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V+S+G N GQLG G+ + P+ ++SL+GI ++Q AG
Sbjct: 141 QISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGS 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ +S +G V+A+GK++ G+ + K P V SL+N+ V + G TAVLS
Sbjct: 201 QSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLS 260
Query: 268 REGRVYTFSWGNDARLGHHT 287
++G VYTF +LG ++
Sbjct: 261 KDGSVYTFGDDTHGQLGQNS 280
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 23/189 (12%)
Query: 331 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 387
+ CG G+LG S IEQ L Q +V ++ G H+ V +G + +WG
Sbjct: 56 LSCGQNPYGQLGRKSNNSS-----IEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGD 110
Query: 388 GRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G G LG GN + PK + L + K I ++ G++ + +SEDG V+S+G + LG
Sbjct: 111 GSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLG 170
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
G++ N TPQLV SLK + +VQ++ S +FAL+ SG ++A+G
Sbjct: 171 -------LGSQIINQATPQLVKSLKGI--PLVQVTAGGS-----QSFALSMSGTVFAWGK 216
Query: 507 GDKGQLGIE 515
+ GQLG +
Sbjct: 217 NNAGQLGFK 225
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 28/316 (8%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-AAIGNFFTAVLSREGRVYTFS 276
+Y +G + FG+ +QG K V + + ++ VQ + G T L +G + +
Sbjct: 1 MYCWGDNCFGQLAL-LQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCG 59
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
+LG + + +E + +LE +V I+ G + +A++ + S +YS G G
Sbjct: 60 QNPYGQLGRKSNNSSIEQ---ISSLEAQTIVDISCGTNHSVAVSDEGS---IYSWGDGSE 113
Query: 337 GKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
G+LG G+ + P+ I L N + + ++ G +H+ + +DGRV +WG + G LG
Sbjct: 114 GQLGTGNLSSRNFTPKKITG--LFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGL 171
Query: 396 GNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
G++ ++ P++V++L + + V G +F +S G V+++G + LG +
Sbjct: 172 GSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGF------K 225
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
+ P V SL+ N V IS HT L++ G +Y FG GQLG
Sbjct: 226 SDPMKGTFKPHAVNSLR--NLGVAYISCGEE-----HTAVLSKDGSVYTFGDDTHGQLG- 277
Query: 515 ELVNNQTERGNPERVD 530
N+ + P++++
Sbjct: 278 --QNSGNQTSVPQKIE 291
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 14/297 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ VT G ++ FGSN+ GQLG GT +P +++L+ R+ A G T++
Sbjct: 44 GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVF 103
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 271
+ G +YA G ++ E + G+ TS LVE K + A G+ +A L+++GR
Sbjct: 104 TSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+Y ++ ++G E N + P + +G V ++ GY + + A+Y+
Sbjct: 162 LYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDG---ALYT 214
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G GKLG + H ++ +Q + + V VA G H + ++ V ++G G++
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQF 272
Query: 391 GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LGHG ES +P+VV+ + H A G+ T +++++G +Y+FG G LG
Sbjct: 273 GQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 133/252 (52%), Gaps = 20/252 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQG-IRIIQAAAGAGRT 209
G H++ TS+G +Y+ G N+ GQLG G + + + QG I+++ AAG+ +
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKML--AAGSNTS 153
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++ G++Y G +S G+ G + L +PQ V K +F V + G + +A ++ +
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYHSAFVTVD 209
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMA 327
G +YTF + +LG TE + H + + +IP VVQ+A G + +AL
Sbjct: 210 GALYTFGEKDSGKLGLSTEK--LANHKVPQQVTDIPDRVVQVACGGGHTVALTEN----E 263
Query: 328 VYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
VYS G G G+LGHG+ E PR++E F+ ++ A G H A++ +G + T+G
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHA--ACGENHTALITDNGLLYTFG 321
Query: 387 WGRYGCLGHGNE 398
GR+G LG G E
Sbjct: 322 DGRHGKLGLGEE 333
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 145/317 (45%), Gaps = 27/317 (8%)
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
++ + G T L+++ G+++ FG +++G+ G + T V P V++L++ V A G
Sbjct: 39 LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT--VNKPTCVKALRSERVKLTACG 96
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
T V + G +Y N+ +LG + H + + P+ +AAG AL
Sbjct: 97 RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156
Query: 320 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+Y G G++G G ++ P+ + + + V+ G +H+A V D
Sbjct: 157 T---QDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVD 209
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSF 437
G + T+G G LG E+ + KV Q + D+ + + VA G T ++E+ +VYSF
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSF 267
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G+ LGH + L +V E + + ++ HT +T+
Sbjct: 268 GLGQFGQLGHGTFI--------------FESRLPRVVEHFRKGRVKHAACGENHTALITD 313
Query: 498 SGKLYAFGAGDKGQLGI 514
+G LY FG G G+LG+
Sbjct: 314 NGLLYTFGDGRHGKLGL 330
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG S A+T G +Y G NS GQ+G G P+ + G R+ + G +
Sbjct: 148 AGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAF 205
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 269
++ G +Y FG+ G + G+ KL PQ V + + VVQ A G T L+ E
Sbjct: 206 VTVDGALYTFGEKDSG--KLGLSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALT-E 261
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
VY+F G +LGH T + L +E+ ++ C A +Y
Sbjct: 262 NEVYSFGLGQFGQLGHGTF---IFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318
Query: 330 SVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
+ G G GKLG G T++ P L +F L+ V G H V+ +
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRF--LDYHVHSVTCGGCHMLVLAK 367
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G GH++A+T + VYSFG GQLGHGT E R PR + + R+ AA G
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T LI+D G +Y FG G+ G + P L + V G VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Query: 268 R 268
+
Sbjct: 367 K 367
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F L N P+ ++ G H A+V ++G++ +G +G LG G + + P V+AL +
Sbjct: 30 KFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSER 89
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
A G T V + G++Y+ G LG D TS V
Sbjct: 90 VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND--------------RTSFHLVE 135
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
Q + + + ALT+ G+LY G +GQ+G+
Sbjct: 136 FFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGL 175
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
+ + G V T+G ++ ++ P NDV + ++ GD T +V+E+G ++
Sbjct: 9 IPESGAVFTFGKSKF---------ADNAPSKFWLKNDV-PLRISCGDEHTALVTENGKLF 58
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
FG LG V P V +L+ +ERV + + HT
Sbjct: 59 MFGSNNWGQLGLGT--------KTTVNKPTCVKALR--SERVKLTACGRT-----HTLVF 103
Query: 496 TESGKLYAFGAGDKGQLGIELVNNQT 521
T G LYA G ++GQLG+ N++T
Sbjct: 104 TSRGNLYACGGNNEGQLGLGDCNDRT 129
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 161/362 (44%), Gaps = 44/362 (12%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H+ +T G ++++G G+LGHG E PR I +L+GI +Q A G
Sbjct: 275 QVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAY 334
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T ++ +G++Y +G G G + +P VE L + V + G+ + VL+R
Sbjct: 335 TAAVTASGELYTWGAGENGRLGLGDVADR--HTPSRVEGLHSK-VKEVYAGSVHSCVLTR 391
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-----IPVVQIAAGYCYLLALACQP 323
EG VY F G GH + ++P L+ T + + + G + +AL CQ
Sbjct: 392 EGTVYAF--GKHEYTGHGDHEDVLDPR-LIPTFSGGSGALVRQISVGPGGYHTMALTCQG 448
Query: 324 SGMAVYSVGCGLGGKLGHGS-----RTDE-----KHPRLIEQFQLLNLQPVVVAAGAWHA 373
VY+ G +LG G+ R E P+L+E +N+ V V AG H+
Sbjct: 449 Q---VYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNI--VKVVAGWGHS 503
Query: 374 AVVGQDGRVCTWGWGRYGCLGHG-------NEECESVPK---VVQALNDVKAIHVATGDY 423
A + DG++ G G LG G NE ++ L +K +A G
Sbjct: 504 AALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGE 563
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
+ V+E+G+V+SFG G+ LGH + P+LV +LK ++ ++
Sbjct: 564 HSVAVAENGEVWSFGAGQKGQLGHESTTRED--------FPRLVQALKSTRREIMHVACG 615
Query: 484 NS 485
N+
Sbjct: 616 NN 617
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 172/383 (44%), Gaps = 31/383 (8%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E QA+A P V + GVV + G+ G G ++ P ++ L G+ + Q G
Sbjct: 224 EAFQALADP--RRVVFAMGVVDDGPHHEVGEGGEGWSDVS--PVVVQGLLGLSVQQVCCG 279
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
+++D G+++ +G+ FG +G + + + SP+ +E+L+ I VQ A G +TA
Sbjct: 280 GQHAAVLTDCGEIFTWGRGGFGRLGHGNR--EGLESPRRIEALEGIPCVQVACGFAYTAA 337
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ G +YT+ G + RLG + P + G + V ++ AG + L + +
Sbjct: 338 VTASGELYTWGAGENGRLGLGDVADRHTPSRVEGL--HSKVKEVYAGSVHSCVLTREGT- 394
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN---LQPVVVAAGAWHAAVVGQDGRV 382
VY+ G GHG D PRLI F + ++ + V G +H + G+V
Sbjct: 395 --VYAFG--KHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQV 450
Query: 383 CTWGWGRYGCLGHGN-----EECESV-----PKVVQALNDVKAIHVATGDYTTFVVSEDG 432
WG R LG GN E P++V++L + + V G + ++ DG
Sbjct: 451 YAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDG 510
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+Y G LG + N + + + ++ QI+ H+
Sbjct: 511 QLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGE-----HS 565
Query: 493 FALTESGKLYAFGAGDKGQLGIE 515
A+ E+G++++FGAG KGQLG E
Sbjct: 566 VAVAENGEVWSFGAGQKGQLGHE 588
>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
Length = 484
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 40/354 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 183 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 240
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 241 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 300
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 301 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 357
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 358 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 410
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
S+ G S + G D ++ + Q V +L + V + ++S+
Sbjct: 411 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 459
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 169 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 227
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 228 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 286
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 287 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 344
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 345 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 395
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 396 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 452
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 453 MGYSHSLVIARD 464
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 101 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 158
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 159 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 214
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 215 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 274
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 275 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 325
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 297
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 349
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 350 QIYAGYTC-----SFAVSEVGGLFFWGA 372
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 346 RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 399
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 400 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 459
Query: 265 VLSRE 269
V++R+
Sbjct: 460 VIARD 464
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 99 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 143
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 144 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 188
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 189 GENKMGQLGL---GNQTD 203
>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
Length = 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 40/354 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 219 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 276
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 337 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 393
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 394 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 446
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
S+ G S + G D ++ + Q V +L + V + ++S+
Sbjct: 447 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 495
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 381 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 431
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 432 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 488
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 489 MGYSHSLVIARD 500
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 251 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 385
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 224
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 382 RGATQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 435
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 436 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 495
Query: 265 VLSRE 269
V++R+
Sbjct: 496 VIARD 500
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 130 KLVLRFLLA------GEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE 183
+++ RFL++ C + N+ A+ PG+ VV S+G GQLGHG T+
Sbjct: 36 EMLARFLISTPLLPESWRLCSKVNASAVNFPGN--------VVCSWGRGEDGQLGHGDTD 87
Query: 184 EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSP 242
+ P + + G I+ GA T+ S +G+ VY++G FG +G + P
Sbjct: 88 DRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP 147
Query: 243 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 302
+ +L+ + + Q + G+ ++ E +V ++ + LG T + P +L E
Sbjct: 148 --IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKIL-AFE 204
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
I + +AAG + +A+ +Y G G G LG G D P E+ + +
Sbjct: 205 GIRIKMVAAGAEHSVAITEDGD---LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGDK 258
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V+V+ G H + G + T GW +YG LGHG+ E VP+ VQAL+D
Sbjct: 259 IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSD 308
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 27/276 (9%)
Query: 238 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
L+++P L ES + V A+ NF V+ GR G D +LGH + + P L
Sbjct: 42 LISTPLLPESWRLCSKVNASAVNFPGNVVCSWGR------GEDGQLGHGDTDDRLLPTKL 95
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +V + G Y +A + SG VYS G G G+LGHG +D P I Q
Sbjct: 96 -SAFDGQDIVSVTCGADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQ 152
Query: 358 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 417
L ++ + + G H V + +V +WG + G LG G + VP+ + A ++
Sbjct: 153 GLRIKQI--SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKM 210
Query: 418 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 477
VA G + ++EDGD+Y +G G +LG D L P+ V +++
Sbjct: 211 VAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--------RLIPEKVNI---DGDKI 259
Query: 478 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
V +S W HT +++ SG LY G GQLG
Sbjct: 260 VMVSCG----WR-HTISISSSGGLYTHGWSKYGQLG 290
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VC 383
G V S G G G+LGHG D P + F ++ V V GA + + G+ V
Sbjct: 67 GNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVY 124
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WGWG +G LGHG+ +P ++AL ++ ++ GD V+ + V S+G ++
Sbjct: 125 SWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNG 184
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
LG D PQ + + + + ++V H+ A+TE G LY
Sbjct: 185 ELGLGTTKDSH--------VPQKILAFEGIRIKMVAAG-------AEHSVAITEDGDLYG 229
Query: 504 FGAGDKGQLGIELVNNQTERGNPERVDID 532
+G G G LG+ + +R PE+V+ID
Sbjct: 230 WGWGRYGNLGL---GDTNDRLIPEKVNID 255
>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
Length = 500
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 198
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 199 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 256
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 257 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 316
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 317 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 373
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 374 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 426
Query: 433 DVYSFG 438
S+G
Sbjct: 427 STISWG 432
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 185 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 243
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 244 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 302
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 303 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 360
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 361 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 411
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 412 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 468
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 469 MGYSHSLVIARD 480
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 117 PHRY-GCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 174
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 175 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 230
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 231 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 290
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 291 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 341
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 142 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 200
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 201 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 253
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQA------------LNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 254 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 313
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 314 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 365
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 366 QIYAGYTC-----SFAVSEVGGLFFWGA 388
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 362 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 415
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 416 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 475
Query: 265 VLSRE 269
V++R+
Sbjct: 476 VIARD 480
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 115 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 159
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 160 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 204
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 205 GENKMGQLGL---GNQTD 219
>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
Length = 498
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 196
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 197 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 254
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 255 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 314
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 315 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 371
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 372 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 424
Query: 433 DVYSFG 438
S+G
Sbjct: 425 STISWG 430
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 183 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 241
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 242 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 300
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 301 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 358
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 359 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 409
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 410 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 466
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 467 MGYSHSLVIARD 478
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 115 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 172
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 173 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 228
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 229 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 288
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 289 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 339
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 140 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 198
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 199 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 251
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 252 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 311
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 312 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 363
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 364 QIYAGYTC-----SFAVSEVGGLFFWGA 386
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 360 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 413
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 414 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 473
Query: 265 VLSRE 269
V++R+
Sbjct: 474 VIARD 478
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 113 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 157
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 158 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 202
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 203 GENKMGQLGL---GNQTD 217
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 185/416 (44%), Gaps = 73/416 (17%)
Query: 148 SQAIAGPGHSIAVTS--KGVVYSFGSNSSGQLGHGTTEEEW------------RPRPIRS 193
+Q I G + +T + V+S+GSN + +LGH + +P +++
Sbjct: 97 NQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKA 156
Query: 194 LQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--- 249
L+ +I + G + S ++G VY +G G G + +V PQ++E LK
Sbjct: 157 LENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGR--LGNENEGVVQEPQVLECLKIAM 214
Query: 250 --NIFVVQAAIGNFFTAVL-----SREGRVYT---FSWGNDARL---------GHHTE-- 288
+ V+Q + G T L EG F WGN+ +L G++ +
Sbjct: 215 EIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQ 274
Query: 289 -------PNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
P+ ++P P +N ++ + A Y Y AL S VY+ G G G
Sbjct: 275 SAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALT---SNGNVYTWGSGEFG 331
Query: 338 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 397
+LG+ + P+++++ L Q ++ G +H A + + G+V +WG G G LGHG+
Sbjct: 332 RLGYMDIKKQPQPKVLKE--LTGFQVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGS 389
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
E + V AL ++ I ++ G+ T ++ G+VYS+G G+ L
Sbjct: 390 VLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSWGGGQLGQL-----------G 438
Query: 458 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
H + L L + + + + QIS H+ ALT+ GKL+ +G+ + GQLG
Sbjct: 439 HGDFLRQSLPIKVANLEDNIAQISAG-----KRHSSALTDDGKLFTWGSNEYGQLG 489
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 64/319 (20%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND-------- 291
P+ V +L+ + Q G+ T +++ + FSWG++ A+LGH
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 292 ---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
V+ ++ LEN + ++ G + A + + SG+ VY G GL G+LG+ + +
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNE-SGL-VYGWGLGLNGRLGNENEGVVQ 202
Query: 349 HPRLIEQFQL---LNLQPVVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGH 395
P+++E ++ + ++ + ++ G H + Q ++ WG LG
Sbjct: 203 EPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262
Query: 396 ------GNEECESV----------PKVVQALNDVKA-----IHVATGDYTTFVVSEDGDV 434
NE+ +S P Q D K I V Y + ++ +G+V
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 494
Y++G GE LG+ I PQ + +V +ISL Y+ H A
Sbjct: 323 YTWGSGEFGRLGYMDIKK----------QPQPKVLKELTGFQVTRISLG---YY--HGAA 367
Query: 495 LTESGKLYAFGAGDKGQLG 513
+TE G+++++G G GQLG
Sbjct: 368 ITEQGQVFSWGRGINGQLG 386
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 42/204 (20%)
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV------ 403
P + + N+ V+ + + V +WG + LGH +
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 404 ------PKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLGHNAIADGQGN 456
P +V+AL + K ++ G +F S E G VY +G G + LG+
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGN--------E 196
Query: 457 RHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFAL----------TESGKLYA 503
V PQ++ LK ++ +V+QIS + HT AL T KL+
Sbjct: 197 NEGVVQEPQVLECLKIAMEIKMKVLQISCGEN-----HTLALIQMPPQNEGETSQNKLFV 251
Query: 504 FGAGDKGQLGIELVNNQTERGNPE 527
+G DK QLG++ NQ + N +
Sbjct: 252 WGNNDKLQLGMD---NQADGNNED 272
>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
Length = 484
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I +L I+ AA G T+ ++D
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 183 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYSF 240
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ + +A G
Sbjct: 241 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACG 300
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 301 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 357
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 358 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 410
Query: 433 DVYSFG 438
S+G
Sbjct: 411 STISWG 416
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 169 AACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 227
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 228 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 286
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ + A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 287 LPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 344
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ L +
Sbjct: 345 GRGATQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQ--DLCGWR 393
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+A G + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 394 IRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 452
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 453 MGYSHSLVIARD 464
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 28/297 (9%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP--------- 289
V+ + + LK+ F+++ I F +G++ F N +G P
Sbjct: 35 VSKGTIFQRLKSAFLLKTRILLFKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNL 94
Query: 290 --NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 347
N PH G L + V + +G C +L G ++S G G+LGHG
Sbjct: 95 GQNLWGPHRY-GCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRV 152
Query: 348 KHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 406
+ PRLIE L+ + +V+AA G H + G V +G + G LG GN+ ++VP
Sbjct: 153 EAPRLIEA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSP 208
Query: 407 VQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANV 461
Q + + + I +A G + ++ G++YSFGC E LGHN+ IA Q +
Sbjct: 209 AQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCE 268
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
L P+ V + + + + N ++ + HT L +++++G G G+LG
Sbjct: 269 LVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLG 325
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQA------------LNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V +HV
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHV 297
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 349
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 350 QIYAGYTC-----SFAVSEVGGLFFWGA 372
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 346 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 399
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 400 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 459
Query: 265 VLSRE 269
V++R+
Sbjct: 460 VIARD 464
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 99 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 143
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 144 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 188
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 189 GENKMGQLGL---GNQTD 203
>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
Length = 483
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 151 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 114 VSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNH 173
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++
Sbjct: 174 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDC 231
Query: 269 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 305
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 232 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 291
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 292 VRDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 348
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 349 IYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 401
Query: 426 FVVSEDGDVYSFG 438
+V+ D S+G
Sbjct: 402 IIVAADESTISWG 414
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 167 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAIPSPAQIMYNGQPITKMACGAEF 225
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 226 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 284
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 285 LPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 342
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 343 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 393
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 394 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 450
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 451 MGYSHSLVIARD 462
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 99 PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 156
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E +L+ + +V AA G H + + G V +G + G LG GN+ +++P Q + +
Sbjct: 157 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAIPSPAQIMYN 212
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 213 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 272
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 273 AIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 323
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 67/330 (20%)
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
GR + G++ +G YG VQ +V+ P SL
Sbjct: 78 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 123
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+++ EG+++++ +LGH + VE L+ L +V A G + LAL
Sbjct: 124 --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 180
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
S V++ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 181 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 233
Query: 381 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 416
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 234 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 293
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 294 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 345
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 346 AAQIYAGYTC-----SFAVSEVGGLFFWGA 370
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 97 WGPHRYGCL--------SGVQVRTVVSGPCAAH-------SLLITTEGKLWSWGRNEKGQ 141
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L + E +V + + HT ALTE+G ++AF
Sbjct: 142 LGH-----GDTKR---VEAPKLIEVLSK--EVIVSAACGRN-----HTLALTETGSVFAF 186
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 187 GENKMGQLGL---GNQTD 201
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 344 RGAAQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWKIRSLAC 397
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 398 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 457
Query: 265 VLSRE 269
V++R+
Sbjct: 458 VIARD 462
>gi|388497640|gb|AFK36886.1| unknown [Lotus japonicus]
Length = 69
Score = 103 bits (258), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/67 (76%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF-TAVLSR 268
MLISD+GQVYAFGKDSFG+AEYGVQG+K V SPQLVESLKNIFVVQAAIGNFF + + R
Sbjct: 1 MLISDSGQVYAFGKDSFGDAEYGVQGSKTVISPQLVESLKNIFVVQAAIGNFFHSCTVKR 60
Query: 269 EGRVYTF 275
+Y F
Sbjct: 61 RQGLYIF 67
>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
Length = 938
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 31 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 90
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 91 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 148
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LAL PS
Sbjct: 149 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALV--PSSGL 205
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 206 IYAFGCGAKGQLGTGHTCNVKCP 228
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 297
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 15 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR- 73
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 74 VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 127
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 128 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVT 187
Query: 417 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+A G +T +V G +Y+FGCG LG
Sbjct: 188 QIACGRQHTLALVPSSGLIYAFGCGAKGQLG 218
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 28/241 (11%)
Query: 278 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 337
G+D +LG T + V L+ L ++Q++ G + LALA ++ G G
Sbjct: 1 GSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHG 57
Query: 338 KLGHG----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
+LG G S+T + R +E L VAAG H+ + G V WG G L
Sbjct: 58 QLGLGKEFPSQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQL 112
Query: 394 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 453
G +E+ P V+ L K ++++ G+ T V+++ G V++FG G LGH+++ D
Sbjct: 113 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 172
Query: 454 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQL 512
R L+ + V QI+ HT AL SG +YAFG G KGQL
Sbjct: 173 VNPRRV----------LELMGSEVTQIACGRQ-----HTLALVPSSGLIYAFGCGAKGQL 217
Query: 513 G 513
G
Sbjct: 218 G 218
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 24/199 (12%)
Query: 334 GLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG + D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G
Sbjct: 1 GSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 57
Query: 392 CLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG G E ++ P+ V++L + VA G +F +S G V+ +G + LG +
Sbjct: 58 QLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 117
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
D + H +L Q +VV IS HT LT+SG ++ FGAG G
Sbjct: 118 KDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCG 162
Query: 511 QLGIELVNNQTERGNPERV 529
QLG + VN++ NP RV
Sbjct: 163 QLGHDSVNDEV---NPRRV 178
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 173 SSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 231
S GQLG TTE+ PR I+ L I+Q + G + ++ GQ + +GK+S G+
Sbjct: 2 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 61
Query: 232 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 291
G + TSPQ V SL+ I + Q A G + LS G V+ + N +LG E +
Sbjct: 62 GKEFPS-QTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 120
Query: 292 VEP-HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 350
P H L L VV I+ G + L SG V++ G G G+LGH S DE +P
Sbjct: 121 ESPCHVKL--LRTQKVVYISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSVNDEVNP 175
Query: 351 RLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECES 402
R + +L+ + +A G H A+V G + +G G G LG G N +C S
Sbjct: 176 RRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 229
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 83 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 142
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ G +P+ V L V Q A G T A++
Sbjct: 143 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 200
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 201 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 233
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 173/393 (44%), Gaps = 69/393 (17%)
Query: 166 VYSFGSNSSGQLGHGTTE--EEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 223
++++GS GQL + + P+ + +IQ G T+ ++ G+VY+ G
Sbjct: 9 LFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCGC 68
Query: 224 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 283
+ F + +G G +L V +L++ ++ A G + A ++ G ++T+ ++ +L
Sbjct: 69 NEFQQLGHGQSGGQLAK----VVALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQL 124
Query: 284 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 343
G + V+ L+ L + VVQ++ G + L L V++ G L G+LG G
Sbjct: 125 GREGDDTGVK---LVRALSDHKVVQVSLGVEHTLVLT---DTARVFAFGSNLKGQLGLG- 177
Query: 344 RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-------- 394
+ E+ + +Q L+ PV + AG WH+ V+ G + WG YG LG
Sbjct: 178 YSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSP 237
Query: 395 --HGNE---ECESV---------------------------PKVVQALNDVKAIHVATGD 422
H NE +C SV P V+ L + +++A G+
Sbjct: 238 NDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGE 297
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
T ++ DG V++FG G LGHN G + P+ +T + V QI+
Sbjct: 298 THTVALTRDGGVFTFGAGRYGQLGHNESTIG-------ISVPRKITEF--MGNVVTQIAC 348
Query: 483 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGI 514
HT AL ++G+L+AFG G QLG+
Sbjct: 349 G-----RFHTLALVPKTGRLFAFGQGTNAQLGM 376
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 150/341 (43%), Gaps = 54/341 (15%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ +T G VYS G N QLGHG + + + +L+ RII A GA
Sbjct: 46 QITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGGQL--AKVVALEHYRIISVACGAYH 103
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
I+ G ++ +G +S G+ G +G T +LV +L + VVQ ++G T VL+
Sbjct: 104 NAAITYNGLLFTWGCNSNGQL--GREGDD--TGVKLVRALSDHKVVQVSLGVEHTLVLTD 159
Query: 269 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
RV+ F G++ + LG+ +E + P +L L +PV +I AG + L S
Sbjct: 160 TARVFAF--GSNLKGQLGLGYSSEQSVSIPQQIL-CLSGLPVRRIVAGGWHSFVLTVSGS 216
Query: 325 GMAVYSVGCG-LG-------------------GKLGHGSRTDEKH--------------- 349
A S G LG G +G S DE+
Sbjct: 217 LYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNV 276
Query: 350 --PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKV 406
P ++ + + V +A G H + +DG V T+G GRYG LGH SVP+
Sbjct: 277 SIPTFVKTLR--GCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRK 334
Query: 407 VQALNDVKAIHVATGDYTTF-VVSEDGDVYSFGCGESASLG 446
+ +A G + T +V + G +++FG G +A LG
Sbjct: 335 ITEFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLG 375
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ A+T G+++++G NS+GQLG ++ + +R+L +++Q + G T+++
Sbjct: 100 GAYHNAAITYNGLLFTWGCNSNGQLGR--EGDDTGVKLVRALSDHKVVQVSLGVEHTLVL 157
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+D +V+AFG + G+ G + V+ PQ + L + V + G + + VL+ G +
Sbjct: 158 TDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSL 217
Query: 273 YTFSWGNDARLG---HHTEPNDVEPH------------------------PLLGTLENIP 305
Y + N +LG + PND + PL +L N+
Sbjct: 218 YAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVS 277
Query: 306 V---VQIAAGYCYLLALACQPSGMA-------VYSVGCGLGGKLGHGSRT-DEKHPRLIE 354
+ V+ G C ++ LAC + V++ G G G+LGH T PR I
Sbjct: 278 IPTFVKTLRG-CEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKIT 336
Query: 355 QFQLLNLQPVV--VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
+F + VV +A G +H A+V + GR+ +G G LG G+ + +P
Sbjct: 337 EF----MGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLP 385
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 41/333 (12%)
Query: 210 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 269
M+ S +++A+G G+ + P+ ++ ++Q G T L+ +
Sbjct: 1 MVSSATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTID 60
Query: 270 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
G VY+ +LGH + + LE+ ++ +A G + A+ +G+ ++
Sbjct: 61 GEVYSCGCNEFQQLGHGQSGGQLAK---VVALEHYRIISVACGAYHNAAITY--NGL-LF 114
Query: 330 SVGCGLGGKLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ GC G+LG G T K R + ++ V V+ G H V+ RV +G
Sbjct: 115 TWGCNSNGQLGREGDDTGVKLVRALSDHKV-----VQVSLGVEHTLVLTDTARVFAFGSN 169
Query: 389 RYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G +E+ S+P+ + L+ + + G + +FV++ G +Y++G LG
Sbjct: 170 LKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLG 229
Query: 447 HNAIADGQGNRHANVLTPQ---------------------LVTSLKQVNERVVQISL--T 483
+ N H N LT + L TSL V+ +L
Sbjct: 230 LSYFGSSP-NDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGC 288
Query: 484 NSIYW---NAHTFALTESGKLYAFGAGDKGQLG 513
+Y HT ALT G ++ FGAG GQLG
Sbjct: 289 EVVYLACGETHTVALTRDGGVFTFGAGRYGQLG 321
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 42/192 (21%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH---------------------GTT---EE 184
+ +AG HS +T G +Y++GSN+ GQLG G+T +E
Sbjct: 200 RIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDE 259
Query: 185 EWRPRP----------------IRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
+ + RP +++L+G ++ A G T+ ++ G V+ FG +G+
Sbjct: 260 QSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQ 319
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHT 287
+ + ++ E + N+ V Q A G F T A++ + GR++ F G +A+LG
Sbjct: 320 LGHNESTIGISVPRKITEFMGNV-VTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGD 378
Query: 288 EPNDVEPHPLLG 299
N + P P+ G
Sbjct: 379 TKNRLLPCPVKG 390
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+ + G H + DG V + G + LGHG + + KVV AL + I VA G Y
Sbjct: 45 IQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGGQ-LAKVV-ALEHYRIISVACGAY 102
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
++ +G ++++GC + LG D G + L+ + +VVQ+SL
Sbjct: 103 HNAAITYNGLLFTWGCNSNGQLGREG--DDTGVKLVRALS----------DHKVVQVSLG 150
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
HT LT++ +++AFG+ KGQLG+ + Q+
Sbjct: 151 VE-----HTLVLTDTARVFAFGSNLKGQLGLGYSSEQS 183
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ S G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 297
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQR- 65
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 66 VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL Q VV ++ G H AV+ + G V T+G G YG LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 417 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 350 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 407
PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V
Sbjct: 10 PRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++L + VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 67 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV---NPR 168
Query: 528 RV 529
RV
Sbjct: 169 RV 170
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 355
L+ L ++Q++ G + LALA S ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
++++ G+ T V+++ G V++FG G LGH+++ D R L+ +
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV----------LELMGS 176
Query: 476 RVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
V QI+ HT A SG +YAFG G +GQLG
Sbjct: 177 EVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 368 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECES 402
G H A V G + +G G G LG G N +C S
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 221
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S+G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 14/207 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLQGIRIIQAA 203
Q G HS+A++ G ++++G N GQLG G TT P+ + L GI + Q +
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTA----PQIVEHLAGIPLAQIS 197
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
AG +M +S +G +Y++GK+ FG+ G+ T+ SP L+E+L N V A G T
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNEFGQL--GLDHTESKDSPSLIEALDNQKVEFLACGGSHT 255
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 323
A+L+++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDL 314
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHP 350
V+S G G G+LG+G D+ P
Sbjct: 315 G--KVFSFGSGKEGQLGNGGTRDQLIP 339
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 50/328 (15%)
Query: 191 IRSLQGIRIIQAAAGAGRTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
+RS++ R Q +GR + G QV+ + G+ + +P+ ++
Sbjct: 47 LRSVEATR--QICCSSGRLAFLERGGAGVQVHQL-----------LPGSDGLRTPKCIKL 93
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
KN+ + +G +LS +G+ + + D H + L+ ++
Sbjct: 94 GKNMKIHSMDLGADHMLILSSDGKPFEY----DNYSMKHLRFESI--------LQEKKII 141
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVV 366
QI G + LAL+ G +++ G L G+LG G + P+++E L + +
Sbjct: 142 QITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEH--LAGIPLAQI 196
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
+AG H+ + G + +WG +G LG + E + P +++AL++ K +A G T
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTA 256
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
++++DG +++FG G+ LGHN+ N L P LV L RV QI+
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--AGNRVTQIACGR-- 304
Query: 487 YWNAHTFA-LTESGKLYAFGAGDKGQLG 513
W HT A +++ GK+++FG+G +GQLG
Sbjct: 305 -W--HTLAYVSDLGKVFSFGSGKEGQLG 329
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ I+ + ++I GA +++S G+ + EY K + +++
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSDGKPF----------EYDNYSMKHLRFESILQE 137
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENI 304
K ++Q G++ + LS+ G + F+WG + +LG + P+ P ++ L I
Sbjct: 138 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTAPQ-IVEHLAGI 191
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
P+ QI+AG + +AL+ SG +YS G G+LG + P LIE L N +
Sbjct: 192 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G H A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306
Query: 425 TFV-VSEDGDVYSFGCGESASLGHNAIAD 452
T VS+ G V+SFG G+ LG+ D
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 25/256 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H + ++S G + + + S L + LQ +IIQ G ++ +
Sbjct: 105 GADHMLILSSDGKPFEYDNYSMKHLRFESI-----------LQEKKIIQITCGDYHSLAL 153
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
S G+++A+G++ G+ G + T+PQ+VE L I + Q + G + LS G +
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPS-TTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNI 212
Query: 273 YTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
Y SWG + +LG HTE D L+ L+N V +A G + AL Q G+ ++
Sbjct: 213 Y--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLACGGSH-TALLTQ-DGL-LF 265
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 388
+ G G G+LGH S +E P L+ +L + +A G WH A V G+V ++G G
Sbjct: 266 TFGAGKHGQLGHNSTQNELRPCLVA--ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSG 323
Query: 389 RYGCLGHGNEECESVP 404
+ G LG+G + +P
Sbjct: 324 KEGQLGNGGTRDQLIP 339
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS+A++ G +YS+G N GQLG TE + P I +L ++ A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T L++ G ++ FG G+ G T+ P LV L V Q A G + T A +
Sbjct: 254 HTALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYV 311
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
S G+V++F G + +LG+ + + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 211
G H+ +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAY 310
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
+SD G+V++FG G+ G +L+ P V S +++
Sbjct: 311 VSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDL 350
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 422
+ + G +H+ + + G + WG +G LG G + + P++V+ L + ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGE 200
Query: 423 YTTFVVSEDGDVYSFGCGESASLG--HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
+ +S G++YS+G E LG H D +P L+ +L N++V +
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLDHTESKD----------SPSLIEALD--NQKVEFL 248
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+ S HT LT+ G L+ FGAG GQLG N+
Sbjct: 249 ACGGS-----HTALLTQDGLLFTFGAGKHGQLGHNSTQNE 283
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 360 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 419
N++ + GA H ++ DG+ Y + ES+ L + K I +
Sbjct: 96 NMKIHSMDLGADHMLILSSDGKPF-----EYDNYSMKHLRFESI------LQEKKIIQIT 144
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
GDY + +S+ G+++++G LG G + + PQ+V E +
Sbjct: 145 CGDYHSLALSKGGELFAWGQNLHGQLG-------VGRKFPSTTAPQIV-------EHLAG 190
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
I L AH+ AL+ SG +Y++G + GQLG++
Sbjct: 191 IPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLD 226
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 174/376 (46%), Gaps = 40/376 (10%)
Query: 161 TSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQ 217
T +G++ ++GS+S+ +LG G + + P + + I + G+ + +++ G
Sbjct: 586 TQRGIM-TWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGD 644
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
VY +G+ S G + P VESL + +V +IG + +A L G + T
Sbjct: 645 VYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLV--SIGYYHSAALKSNGELLT 702
Query: 275 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 334
+ G D +LGH N P ++ T+ + V Q+ G + + C V++ G
Sbjct: 703 WGCGEDGQLGHGDVLNQTIPK-VVQTMTSHWVTQVQCGEKHTI---CLTKNGKVFTWGTS 758
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G+LG G P L+ + N+ + +A G+ H AV+ V +G G +G
Sbjct: 759 EYGQLGLGDTQKNCTPMLVTSLEKYNI--IQIACGSTHCAVLTNAREVLVFGNG--AAMG 814
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 454
N SVP +V AL + ++ G Y+T ++E GDVY++G G+ LGH Q
Sbjct: 815 SAN--IISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGT---NQ 867
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
H P+LV L+ ++ + QIS H LT+SGK+Y G GQLG
Sbjct: 868 SELH-----PKLVDGLR--SQSIRQISC-----GGRHMAFLTDSGKIYTCGKDPFGQLG- 914
Query: 515 ELVNNQTERGNPERVD 530
+ Q ++ P+++D
Sbjct: 915 ---HAQGDQNKPKKID 927
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 17/268 (6%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS A+ S G + ++G GQLGHG + P+ ++++ + Q G T+ ++
Sbjct: 690 HSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKN 749
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G+V+ +G +G + G+ T+ +P LV SL+ ++Q A G+ AVL+ V F
Sbjct: 750 GKVFTWGTSEYG--QLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVF 807
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGCG 334
GN A +G N + ++ L+++ + +++ G+ AL C VY+ G
Sbjct: 808 --GNGAAMG---SANIISVPMMVPALKHLNIERLSCGHYSTAALTECG----DVYTWGS- 857
Query: 335 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 394
G +LGHG+ E HP+L++ + +++ ++ G H A + G++ T G +G LG
Sbjct: 858 -GQELGHGTNQSELHPKLVDGLRSQSIR--QISCGGRHMAFLTDSGKIYTCGKDPFGQLG 914
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGD 422
H + ++ PK + +L I V+ G+
Sbjct: 915 HAQGD-QNKPKKIDSLLKTTFISVSCGE 941
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 17/235 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q G H+I +T G V+++G++ GQLG G T++ P + SL+ IIQ A G+
Sbjct: 734 TQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGST 793
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++++A +V FG + + +++ P +V +LK++ + + + G++ TA L+
Sbjct: 794 HCAVLTNAREVLVFGNGA------AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALT 847
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 326
G VYT WG+ LGH T N E HP L+ L + + QI+ G ++ L SG
Sbjct: 848 ECGDVYT--WGSGQELGHGT--NQSELHPKLVDGLRSQSIRQISCGGRHMAFLT--DSG- 900
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
+Y+ G G+LGH ++ D+ P+ I+ LL + V+ G H A + R
Sbjct: 901 KIYTCGKDPFGQLGH-AQGDQNKPKKID--SLLKTTFISVSCGENHNASLFDTTR 952
>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
Length = 439
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 37/313 (11%)
Query: 151 IAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G
Sbjct: 70 VSGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNH 129
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++
Sbjct: 130 TLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQIMYNGQPI--TKMACGAEFSMIMDC 187
Query: 269 EGRVYTFSWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIP 305
+G +Y+F +LGH+++ D E P + + N+
Sbjct: 188 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVV 247
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 248 VRDVACGTNHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQ 304
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
+ AG + V + G + WG + + E PK VQ L K +A G ++
Sbjct: 305 IYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWKIRSLACGK-SS 357
Query: 426 FVVSEDGDVYSFG 438
+V+ D S+G
Sbjct: 358 IIVAADESTISWG 370
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 123 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAIPSPAQIMYNGQPITKMACGAEF 181
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 182 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 240
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 241 LPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 298
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 299 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIR 349
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 350 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVA 406
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 407 MGYSHSLVIARD 418
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 55 PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 112
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E +L+ + +V AA G H + + G V +G + G LG GN+ +++P Q + +
Sbjct: 113 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPSPAQIMYN 168
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 169 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 228
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 229 AIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 279
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 67/330 (20%)
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
GR + G++ +G YG VQ +V+ P SL
Sbjct: 34 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 79
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+++ EG+++++ +LGH + VE L+ L +V A G + LAL
Sbjct: 80 --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
S V++ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 137 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 189
Query: 381 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 416
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 190 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 249
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 250 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 301
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 302 AAQIYAGYTC-----SFAVSEVGGLFFWGA 326
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 53 WGPHRYGCL--------SGVQVRTVVSGPCAAH-------SLLITTEGKLWSWGRNEKGQ 97
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L + E +V + + HT ALTE+G ++AF
Sbjct: 98 LGH-----GDTKR---VEAPKLIEVLSK--EVIVSAACGRN-----HTLALTETGSVFAF 142
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 143 GENKMGQLGL---GNQTD 157
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G +I A
Sbjct: 300 RGAAQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWKIRSLAC 353
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L I+ Q A+G +
Sbjct: 354 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSL 413
Query: 265 VLSRE 269
V++R+
Sbjct: 414 VIARD 418
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 177/428 (41%), Gaps = 95/428 (22%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLQGIRIIQAAAGAGRTM 210
G HS+AV G VY +G GQLG+G + +P+R L+ R++ G +
Sbjct: 37 GEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCL 96
Query: 211 LISDAGQVYAFG-----------KDSFGEA-----------------------EYGVQGT 236
++ G++Y +G K+ FG A G G
Sbjct: 97 AVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGE 156
Query: 237 KLVT----------------SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 280
+L SP++V L+++ VV+ A G F+ ++ +G VY++ +
Sbjct: 157 ELEELSRVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEK 216
Query: 281 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 340
+LG N P L+ L+ + +V G + + L+ + VY+ G G+ G+LG
Sbjct: 217 CQLGLGHRYNQSVPQ-LVPHLQGVHIVSATCGQQHSVLLS---AAGHVYTFGLGVFGQLG 272
Query: 341 HGSRTDEKHPRLIEQF-------QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
HG +DE+ PR +E + + V +A G+ H +G G V TWG YG
Sbjct: 273 HGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQ 332
Query: 394 GHGN--------EECE-------SVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSF 437
G N + E + P+ + D K I HV+ G + DG VYS+
Sbjct: 333 GGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSW 392
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G LGH GN H L P+L+ + ER+VQ + H+ A+
Sbjct: 393 GWGSYGVLGH-------GN-HRFQLVPKLIRRIG--GERIVQTAAGAK-----HSLAVNA 437
Query: 498 -SGKLYAF 504
S L+AF
Sbjct: 438 GSSTLFAF 445
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
+ AG S+AVTS+G VYS+G N QLG G + P+ + LQG+ I+ A G
Sbjct: 191 EVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQH 250
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTK--------LVTSPQLVESLKNIFVVQAAIGN 260
++L+S AG VY FG FG+ +GV + LV + + VES +VQ A G+
Sbjct: 251 SVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGE-RIVQIACGS 309
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE------------------PHPLLGTLE 302
T L G V+T WG+ A G N E P L G +
Sbjct: 310 HHTLALGVSGTVWT--WGS-AEYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFD 366
Query: 303 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+ ++ G+ + LA A S VYS G G G LGHG+ + P+LI + +
Sbjct: 367 GKHIAHVSCGHLHNLATARDGS---VYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERI- 422
Query: 363 PVVVAAGAWHAAVV 376
V AAGA H+ V
Sbjct: 423 -VQTAAGAKHSLAV 435
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 148/358 (41%), Gaps = 39/358 (10%)
Query: 170 GSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
G+ G+LG G +E P + +G RI A G +M + + G VY +G+ G+
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
G + P VE L++ VV G ++ G++Y WG L H E
Sbjct: 61 LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLY--QWG---MLHKHVE 115
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYL----LALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N +A G L + S Y+ G G +L SR
Sbjct: 116 GS-----------ANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGA-TGEELEELSR 163
Query: 345 TD---------EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 395
+ P ++ Q +++ V VAAG + V G V +WG+ LG
Sbjct: 164 VQNFGSFTPYTQPSPEVVTGLQ--HVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGL 221
Query: 396 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 455
G+ +SVP++V L V + G + ++S G VY+FG G LGH +D +
Sbjct: 222 GHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERF 281
Query: 456 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
R L P ++ ER+VQI+ + HT AL SG ++ +G+ + GQ G
Sbjct: 282 PRRVEALVPA-EEGVESAGERIVQIACGSH-----HTLALGVSGTVWTWGSAEYGQQG 333
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++A G VYS+G S G LGHG + P+ IR + G RI+Q AAGA ++ + +A
Sbjct: 379 HNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV-NA 437
Query: 216 GQVYAFGKD 224
G F D
Sbjct: 438 GSSTLFAFD 446
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGA 82
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G + G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAG--QLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+Y+ GCG G+LG G + K P ++ +
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCPSPVKGY 226
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 297
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P +
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV 66
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 67 R-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL Q VV ++ G H AV+ + G V T+G G G LGHG+ E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVT 179
Query: 417 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 350 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 407
PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V
Sbjct: 10 PRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV 66
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++L + VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 67 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+VV IS HT LT+SG ++ FGAG GQLG +N++ NP
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---NPR 168
Query: 528 RV 529
RV
Sbjct: 169 RV 170
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 106/223 (47%), Gaps = 13/223 (5%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + TSPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRS 68
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPV 306
L+ I + Q A G + LS G V+ + N +LG E + P H L L V
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKV 126
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
V I+ G + L SG V++ G G G+LGHGS DE +PR + +L+ + +
Sbjct: 127 VYISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQI 181
Query: 367 AAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 405
A G H A V G + +G G G LG G N +C S K
Sbjct: 182 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 287 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 342
T + V L+ L ++Q++ G + LALA ++ G G+LG G
Sbjct: 2 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFP 58
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
S+T + R +E L VAAG H+ + G V WG G LG +E+
Sbjct: 59 SQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 113
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P V+ L K ++++ G+ T V+++ G V++FG G LGH ++ D R
Sbjct: 114 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--- 170
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
L+ + V QI+ HT A SG +YAFG G +GQLG
Sbjct: 171 -------LELMGSEVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ +G ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 15/299 (5%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E QA +G HS+ + S G V+S G N GQLG + + IR+L+ + + + G
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSCG 83
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
++ + G+V+A+G S G+ G + T L+ P +++L +I + Q + G++ +
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PMKIKTLNDIKIKQVSCGHYHSL 141
Query: 265 VLSREGRVYTFSWG--NDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
LS G+V FSWG +D +LG + P+ P + +L+ IP+ Q+AAG + AL+
Sbjct: 142 ALSEGGQV--FSWGSNSDGQLGLGKKFPSQASPQR-VRSLDGIPLAQVAAGGAHSFALSL 198
Query: 322 QPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
SG + + G G+L H + + + L NL + ++ G H V+ Q+G
Sbjct: 199 --SGTS-FGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNG 255
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 438
+V T+G YG LGH +S P++V+ ++ + + + G Y T V G V SFG
Sbjct: 256 KVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVSFG 313
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 155/322 (48%), Gaps = 38/322 (11%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L G+ + QAA+G ++L+ GQV++ G + G + G +G + + +L+ + V
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDN--GRGQLGQRGAPCSAQLKRIRALETLHV 77
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPL-LGTLENIPVVQIA 310
+ G + + +GRV+ + G++ +LG E N + P+ + TL +I + Q++
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI---PMKIKTLNDIKIKQVS 134
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAG 369
G+ + LAL+ G V+S G G+LG G + + P+ + + L VAAG
Sbjct: 135 CGHYHSLALS---EGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPL--AQVAAG 189
Query: 370 AWHAAVVGQDGRVCTWGWGRYGC----LGHGNEECESV-PKVVQALNDVKAIHVATGDYT 424
H+ + G ++GWGR L N +S P + AL ++ I+++ G
Sbjct: 190 GAHSFALSLSG--TSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEH 247
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
T V++++G V++FG LGH+ A+ G PQLV ++ V QI
Sbjct: 248 TVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG--------PQLVEG---IDGLVSQIDCG- 295
Query: 485 SIYWNAHTFA-LTESGKLYAFG 505
+ HT A + +GK+ +FG
Sbjct: 296 ----SYHTLAYVYTTGKVVSFG 313
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 15/199 (7%)
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
CG G+ G R +L L L +V+ G H+ V GRV WG G G
Sbjct: 46 SCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEG 105
Query: 392 CLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
LG G +E +P ++ LND+K V+ G Y + +SE G V+S+G L
Sbjct: 106 QLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQL----- 160
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G G + + +PQ V SL I L AH+FAL+ SG + +G + G
Sbjct: 161 --GLGKKFPSQASPQRVRSLD-------GIPLAQVAAGGAHSFALSLSGTSFGWGRNNAG 211
Query: 511 QLGIELVNNQTERGNPERV 529
QL + N + P +
Sbjct: 212 QLALHKNNVSGQSYKPYSI 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 24/263 (9%)
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 314
QAA G + +L G+V++ +LG P + + LE + V ++ G
Sbjct: 27 QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRA-LETLHVDLVSCGKE 85
Query: 315 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLN-LQPVVVAAGAWH 372
+ LA+ C V++ G G G+LG G + K LI + + LN ++ V+ G +H
Sbjct: 86 HSLAV-CHKG--RVFAWGAGSEGQLGTG---EFKETNLIPMKIKTLNDIKIKQVSCGHYH 139
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
+ + + G+V +WG G LG G + ++ P+ V++L+ + VA G +F +S
Sbjct: 140 SLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLS 199
Query: 432 GDVYSFGCGESASLG-HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G + +G + L H GQ + P +++LK N V+ IS
Sbjct: 200 GTSFGWGRNNAGQLALHKNNVSGQSYK------PYSISALK--NLGVIYISCGYE----- 246
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT LT++GK++ FG GQLG
Sbjct: 247 HTVVLTQNGKVFTFGDNTYGQLG 269
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 17/337 (5%)
Query: 151 IAGPGHSIAVT-SKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRI--IQAAAGA 206
+AG +AV + G V++ G N SGQ G+GT EE P+R+L GI I + AA G
Sbjct: 502 VAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGC 561
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAV 265
+ ++ G V+++G + G+ G +K T P++++SL+ + + AA+ +AV
Sbjct: 562 EHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSYHHSAV 620
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+S G + TF + +LG + P ++ L + V + A G + +A S
Sbjct: 621 VSSNGELLTFGMNDCGQLGLDHTQHQHTPQ-VVDALSSQVVTKAACGLYHTVAAT---SD 676
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
VYS G G+LG G + K P L++ + + V V+ G +H + + G++ T
Sbjct: 677 GEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLIT 736
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG YG LG G++E ++ + V K + + G Y + ++ +G V FG
Sbjct: 737 WGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQ 796
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 481
LG A + P V S N+ VV+I+
Sbjct: 797 LGAGARTLSSAD------LPLPVPSNSLANDEVVRIA 827
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 155/324 (47%), Gaps = 34/324 (10%)
Query: 203 AAGAGRTMLISDAG-----QVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQ 255
A AGR+ ++ ++++ G++++GE G +KL P S K I V
Sbjct: 446 AGEAGRSEMLPTVASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFF--SAKGIRDV- 502
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--GY 313
A GN AV+ +G V+T + G+ T V + L I + +AA G
Sbjct: 503 -AGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGC 561
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWH 372
++LA+A S AV+S G G+LG GS + H PR+I+ + A H
Sbjct: 562 EHMLAVA---SDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KYHITTAAVSYHH 617
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+AVV +G + T+G G LG + + + P+VV AL+ A G Y T + DG
Sbjct: 618 SAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDG 677
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHA-NVLTPQLV-TSLKQVNERVVQISLTNSIYWNA 490
+VYSFG + LG HA N+ TP LV TSL + +E++V +S Y+
Sbjct: 678 EVYSFGKNDYGQLGLG---------HARNIKTPALVKTSLGESDEKIVAVSCG---YY-- 723
Query: 491 HTFALTESGKLYAFGAGDKGQLGI 514
HT ++E GKL +G D GQLGI
Sbjct: 724 HTVTISEKGKLITWGRNDYGQLGI 747
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 19/290 (6%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSL-QGIRIIQAAAGAG 207
A G H +AV S G V+S+G N GQLG G+T + PR I SL + I AA
Sbjct: 557 AANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 616
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ ++S G++ FG + G + G+ T+ +PQ+V++L + V +AA G + T +
Sbjct: 617 HSAVVSSNGELLTFGMNDCG--QLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAAT 674
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIPVVQIAAGYCYLLALACQPSG 325
+G VY+F + +LG N P + +L + +V ++ GY + + ++ +
Sbjct: 675 SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGK- 733
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA--GAWHAAVVGQDGRVC 383
+ + G G+LG GS+ + QF L + + A G +H+ ++ +GRV
Sbjct: 734 --LITWGRNDYGQLGIGSKEHKNS----AQFVPLPMSSKIKNASCGCYHSLILMSNGRVM 787
Query: 384 TWGWGRYGCLGHGNEECES----VPKVVQALNDVKAIHVATGDYTTFVVS 429
+G G LG G S +P +L + + + +A G Y++++++
Sbjct: 788 VFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 837
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG---IRIIQAAA 204
++A G H++A TS G VYSFG N GQLG G P +++ G +I+ +
Sbjct: 661 TKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSC 720
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T+ IS+ G++ +G++ +G+ G + K S Q V + + A+ G + +
Sbjct: 721 GYYHTVTISEKGKLITWGRNDYGQLGIGSKEHK--NSAQFVPLPMSSKIKNASCGCYHSL 778
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGY--CYLL 317
+L GRV F N +LG PL +L N VV+IAAG+ Y+L
Sbjct: 779 ILMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 836
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDV--KAIHVATGD 422
VA G AVV DG V T G + G G+G EE + V+AL+ + + A G
Sbjct: 502 VAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGC 561
Query: 423 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
V+ DG V+S+G + LG G+ + TP+++ SL++ + +
Sbjct: 562 EHMLAVASDGAVFSWGYNDRGQLG-------LGSTISKSHTPRMIDSLRE------KYHI 608
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
T + H+ ++ +G+L FG D GQLG++ +Q P+ VD
Sbjct: 609 TTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQH---TPQVVD 653
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 176/382 (46%), Gaps = 45/382 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++GSN +G+LG GTT + P ++ L I+ I AAG ++
Sbjct: 155 AGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAI--AAGNAHSLA 212
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G+V+A+G +S G+ G +++ P LV L N + A + L R+
Sbjct: 213 LDGTGRVWAWGSNSNGQLGDTTAGYRML--PALVPGLTNATGLSAGSNHS----LVRQAD 266
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
T+ WG + +LG T + P + G L + V A L +L + G V+
Sbjct: 267 GTTWVWGANTYGQLGDGTTTSRSAPQQVSG-LAGVDGVLGAE----LHSLVLKSDGT-VW 320
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAW-HAAVVGQDGRVCTWGW 387
+ G G+LG G+ + RL+ Q++ L VV VAAG+ H+ V +G V TWG
Sbjct: 321 TWGSNQRGQLGDGT----QEQRLVP-VQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGH 375
Query: 388 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 447
G LG G+ +VPK AL V+ VA G Y DG V+++G LG
Sbjct: 376 NVEGQLGEGSSSYSAVPKRSHAL--VERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGD 433
Query: 448 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 507
A L P V L N V +S+ AL G ++A+G
Sbjct: 434 GTT--------AQRLLPTQVPGL--TNMVAVAAGHHSSL-------ALKADGTVWAWGDN 476
Query: 508 DKGQLGIELVNNQTERGNPERV 529
GQLG + T+R NP +V
Sbjct: 477 ANGQLGN---GSTTDRSNPTQV 495
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 158/369 (42%), Gaps = 37/369 (10%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
E + AG H +A G V+++G N+ GQLG GTT + P + L ++ AAG
Sbjct: 400 ERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPGL--TNMVAVAAG 457
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
++ + G V+A+G ++ G+ G T ++P V L + + A G+
Sbjct: 458 HHSSLALKADGTVWAWGDNANGQLGNGS--TTDRSNPTQVPGLTGVVSIAAGPGHAL--A 513
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +G ++T+ N +LG T + P + G VV +AAG + L + +
Sbjct: 514 VKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGV---TGVVSVAAGLYHSLVVKVDGT- 569
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 384
V++ G G+LG G+ T P Q NL VV + AG +H+ + DG V
Sbjct: 570 --VWAWGSNYEGQLGGGTTTIRPVPS-----QTPNLTGVVAITAGLYHSLALKTDGTVWA 622
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG+ +G LG+GN + VP V + + + G Y + + DG V+++G
Sbjct: 623 WGYNLHGQLGNGNTTTQQVPTQVPGFS--GGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQ 680
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LG T S E H+ AL G +A+
Sbjct: 681 LGDGTTTSRTTPTQVAGFTG---VSFLAAGEF--------------HSVALRTDGTAWAW 723
Query: 505 GAGDKGQLG 513
G+ DKGQLG
Sbjct: 724 GSNDKGQLG 732
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 169/363 (46%), Gaps = 36/363 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V+++G N+ GQLG GTT P + L +++ AAG ++
Sbjct: 105 AGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLG--EVVRVAAGFSHSLA 162
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + G G +L+ P V+ L I + A GN + L GR
Sbjct: 163 LKTDGTVWAWGSNGAGRLGDGTTTQRLM--PVQVQGLPTIKAI--AAGNAHSLALDGTGR 218
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + ++ +LG T + P L+ L N ++AG + +L Q G +
Sbjct: 219 VWAWGSNSNGQLGDTTAGYRMLP-ALVPGLTN--ATGLSAGSNH--SLVRQADGT-TWVW 272
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ T P+ Q+ L V GA H+ V+ DG V TWG +
Sbjct: 273 GANTYGQLGDGTTTSRSAPQ-----QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQR 327
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G +E VP V L+ V A+ +G ++ V++ +G+V+++G L
Sbjct: 328 GQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMA-NGEVWTWGHNVEGQL----- 381
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
G+G+ + + K+ + V + S+ Y H A G ++A+G KG
Sbjct: 382 --GEGSSSYSAVP-------KRSHALVERTSVAAGRY---HGLASKPDGTVWAWGDNAKG 429
Query: 511 QLG 513
QLG
Sbjct: 430 QLG 432
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 164/368 (44%), Gaps = 37/368 (10%)
Query: 147 NSQAIAGPGHS-IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
N A+A HS +A+ + G V+++G N++GQLG+G+T + P + L G ++ AAG
Sbjct: 450 NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLTG--VVSIAAG 507
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G + + G ++ +G ++ G+ G V P + VV A G + + V
Sbjct: 508 PGHALAVKADGTLWTWGDNNTGQLGDGTT----VDRPIPTQVPGVTGVVSVAAGLYHSLV 563
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+ +G V+ + + +LG T + P P T VV I AG + LAL +
Sbjct: 564 VKVDGTVWAWGSNYEGQLGGGT--TTIRPVPSQ-TPNLTGVVAITAGLYHSLALKTDGT- 619
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V++ G L G+LG+G+ T ++ P + F V + AG +H+ + DG V TW
Sbjct: 620 --VWAWGYNLHGQLGNGNTTTQQVPTQVPGFS----GGVSLGAGIYHSLAIKTDGSVWTW 673
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G+ G LG G + P V V +A G++ + + DG +++G + L
Sbjct: 674 GYNYRGQLGDGTTTSRTTPTQVAGFTGVS--FLAAGEFHSVALRTDGTAWAWGSNDKGQL 731
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G DG H P L + V R + + T A G ++A+G
Sbjct: 732 G-----DGSARWH---YAPTLS---RLVGARGLAAG-------DRFTAARKSDGTVWAWG 773
Query: 506 AGDKGQLG 513
GQLG
Sbjct: 774 DNTYGQLG 781
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 163/363 (44%), Gaps = 36/363 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++AV S G V+++G N+ GQLG+G+ +++ P+R+ I AG ++
Sbjct: 55 AGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQ--RVPVRAWGLWNISAVGAGDLHSLA 112
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+ +G ++FG+ G T +P V L VV+ A G + L +G
Sbjct: 113 MKSDGTVWTWGGNNFGQLGDGT--TTGRQAPVQVPGLGE--VVRVAAGFSHSLALKTDGT 168
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 330
V+ + RLG T + P + G +P ++ IAAG + LAL V++
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMPVQVQG----LPTIKAIAAGNAHSLALDGTGR---VWA 221
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG + P L+ ++AG+ H+ V DG WG Y
Sbjct: 222 WGSNSNGQLGDTTAGYRMLPALVPGLT----NATGLSAGSNHSLVRQADGTTWVWGANTY 277
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G S P+ V L V + A + + V+ DG V+++G + LG
Sbjct: 278 GQLGDGTTTSRSAPQQVSGLAGVDGVLGA--ELHSLVLKSDGTVWTWGSNQRGQLG---- 331
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
DG + L P V L VV ++ + H+ A+ +G+++ +G +G
Sbjct: 332 -DGTQEQR---LVPVQVMGL----SGVVAVAAGS----GQHSVAVMANGEVWTWGHNVEG 379
Query: 511 QLG 513
QLG
Sbjct: 380 QLG 382
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 181/415 (43%), Gaps = 73/415 (17%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G +++GSN GQLG G+ + P R L G R + AAG T
Sbjct: 706 AGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSR-LVGARGL--AAGDRFTAA 762
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
G V+A+G +++G+ GT L T SP V L ++ + A G+ V+ +G
Sbjct: 763 RKSDGTVWAWGDNTYGQLG---DGTTLATRSPAQVSGLTDVEGLAAGEGHVV--VVKMDG 817
Query: 271 RVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+T WGN+A+ LG T + P + G VV +AAGY + LAL + V
Sbjct: 818 TVWT--WGNNAKGQLGDGTTTRRLVPTQVPGL---TGVVAVAAGYAHSLALKADGT---V 869
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G + G+LG G+ T P + ++ + +A+G +H DG + WG+
Sbjct: 870 WGWGENIYGQLGDGTTTQRVAPTQAQGLTVV----LSMASGTYHGLARKADGTLWAWGYN 925
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
+G LG G P +V +L+ V ++ AT ++ + DG V+++G + LG
Sbjct: 926 AHGQLGIGTTTTRLAPTLVPSLSGVVSLS-ATHQHS-LALKPDGTVWAWGYNSNGQLGDG 983
Query: 449 AIADGQGNRHANVLTPQLVTSLKQV---------------------NER----------- 476
RH P L +S+K V N+R
Sbjct: 984 TTT----TRHVPTQAPSL-SSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPR 1038
Query: 477 --VVQISLTNSI----YWNAHTFALTESGKLYAFGAGDKGQLG-----IELVNNQ 520
Q++ NS+ AH ++ G + FG + GQLG I L NQ
Sbjct: 1039 ATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLIRLAPNQ 1093
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 154/362 (42%), Gaps = 36/362 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AGPGH++AV + G ++++G N++GQLG GTT + RP P + ++ AAG +++
Sbjct: 506 AGPGHALAVKADGTLWTWGDNNTGQLGDGTTVD--RPIPTQVPGVTGVVSVAAGLYHSLV 563
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G + E + G T + P +L + + A + + + L +G
Sbjct: 564 VKVDGTVWAWGSNY--EGQLGGGTTTIRPVPSQTPNLTGVVAITAGL--YHSLALKTDGT 619
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + +LG+ P + G V + AG + LA+ S V++
Sbjct: 620 VWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG---VSLGAGIYHSLAIKTDGS---VWTW 673
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P + F ++ +AAG +H+ + DG WG G
Sbjct: 674 GYNYRGQLGDGTTTSRTTPTQVAGFTGVSF----LAAGEFHSVALRTDGTAWAWGSNDKG 729
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G+ P + + V A +A GD T DG V+++G LG
Sbjct: 730 QLGDGSARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTT- 785
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+P V+ L V H + G ++ +G KGQ
Sbjct: 786 -------LATRSPAQVSGLTDVEGLAAG---------EGHVVVVKMDGTVWTWGNNAKGQ 829
Query: 512 LG 513
LG
Sbjct: 830 LG 831
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 163/367 (44%), Gaps = 46/367 (12%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G N GQLG GTT P + G+ + AAG ++
Sbjct: 656 AGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFL--AAGEFHSVA 713
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G +A+G + G+ G + +P L + + A G+ FTA +G
Sbjct: 714 LRTDGTAWAWGSNDKGQ--LGDGSARWHYAPTLS---RLVGARGLAAGDRFTAARKSDGT 768
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
V+ +WG++ +LG T P + G + V +AAG +++ + + V+
Sbjct: 769 VW--AWGDNTYGQLGDGTTLATRSPAQVSGLTD---VEGLAAGEGHVVVVKMDGT---VW 820
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G+ T R + Q+ L VV VAAG H+ + DG V WGWG
Sbjct: 821 TWGNNAKGQLGDGTTT-----RRLVPTQVPGLTGVVAVAAGYAHSLALKADGTV--WGWG 873
Query: 389 R--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG G P Q L V + +A+G Y DG ++++G LG
Sbjct: 874 ENIYGQLGDGTTTQRVAPTQAQGLTVV--LSMASGTYHGLARKADGTLWAWGYNAHGQLG 931
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
L P LV SL VV +S T+ H+ AL G ++A+G
Sbjct: 932 IGTTT--------TRLAPTLVPSL----SGVVSLSATHQ-----HSLALKPDGTVWAWGY 974
Query: 507 GDKGQLG 513
GQLG
Sbjct: 975 NSNGQLG 981
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 33/316 (10%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
R+ AAG T+ + G V+A+G +++G+ G + V P L NI V A
Sbjct: 49 RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRV--PVRAWGLWNISAVGA- 105
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G+ + + +G V+T+ N +LG T P + G E VV++AAG+ + L
Sbjct: 106 -GDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGE---VVRVAAGFSHSL 161
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
AL + V++ G G+LG G+ T P ++ + +AAG H+ +
Sbjct: 162 ALKTDGT---VWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIK----AIAAGNAHSLALD 214
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
GRV WG G LG +P +V L + A ++ G + V DG + +
Sbjct: 215 GTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTN--ATGLSAGSNHSLVRQADGTTWVW 272
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G LG +R A PQ V+ L V + V+ L H+ L
Sbjct: 273 GANTYGQLGDGTTT----SRSA----PQQVSGLAGV-DGVLGAEL--------HSLVLKS 315
Query: 498 SGKLYAFGAGDKGQLG 513
G ++ +G+ +GQLG
Sbjct: 316 DGTVWTWGSNQRGQLG 331
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 153/364 (42%), Gaps = 38/364 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+++G N GQLG+G T + P + G + AG ++
Sbjct: 606 AGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG--VSLGAGIYHSLA 663
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I G V+ +G + G+ G T T Q+ F+ A G F + L +G
Sbjct: 664 IKTDGSVWTWGYNYRGQLGDGTT-TSRTTPTQVAGFTGVSFL---AAGEFHSVALRTDGT 719
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYS 330
+ + + +LG + P TL + + +AAG + A + S V++
Sbjct: 720 AWAWGSNDKGQLGDGSARWHYAP-----TLSRLVGARGLAAGDRFT---AARKSDGTVWA 771
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG G+ + P + L +++ + AAG H VV DG V TWG
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSG--LTDVEGL--AAGEGHVVVVKMDGTVWTWGNNAK 827
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG G VP V L V + VA G + + DG V+ +G LG
Sbjct: 828 GQLGDGTTTRRLVPTQVPGLTGV--VAVAAGYAHSLALKADGTVWGWGENIYGQLG---- 881
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 510
DG T Q V + Q V +S+ + Y H A G L+A+G G
Sbjct: 882 -DGT--------TTQRV-APTQAQGLTVVLSMASGTY---HGLARKADGTLWAWGYNAHG 928
Query: 511 QLGI 514
QLGI
Sbjct: 929 QLGI 932
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ + G V+ +G N GQLG GTT + R P ++ QG+ ++ + A L
Sbjct: 855 AGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ--RVAPTQA-QGLTVVLSMASGTYHGL 911
Query: 212 ISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
A G ++A+G ++ G+ G T+L +P LV SL + + A + + L +G
Sbjct: 912 ARKADGTLWAWGYNAHGQLGIGTTTTRL--APTLVPSLSGVVSLSAT--HQHSLALKPDG 967
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
V+ + + ++ +LG T P P L +++ ++AG+ Y LA+ + V
Sbjct: 968 TVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSSVK-----AVSAGFEYSLAVKADGT---V 1019
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+S G G+LG G+ T P + + L A A VV DG + +G
Sbjct: 1020 WSWGINDRGQLGSGTATPRATPTQVAGLNSVTLLLAARAH----ALVVSADGTMRGFGDN 1075
Query: 389 RYGCLGHGNEECESVPKVV 407
G LG G+ P V
Sbjct: 1076 EAGQLGAGDTLIRLAPNQV 1094
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 162/352 (46%), Gaps = 28/352 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKD 224
VY+ G+ + QLG G E+ P P++ L G I AAAG + L++ ++Y +G
Sbjct: 55 VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
A ++ K + P L E +++ +V+ G LS+ G VY WGN + G
Sbjct: 115 GV-YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYI--WGN-SEFG 170
Query: 285 HHTEPNDVEPH-PL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
N H P+ + + +V ++ G + A++ V++ G G+ G+LGH
Sbjct: 171 QTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGR---VWTWGYGIDGQLGHN 227
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
DE P+ + + + V + + +GR+ T+G G G LGHG
Sbjct: 228 GTEDELKPKELTVIRGEGISRVTCGT-DFTGLLNETEGRLFTFGNGEAGQLGHGERGLCL 286
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P VV L++VK VA G +++DG +S+G GE LGH A D L
Sbjct: 287 EPSVV-PLDNVK--EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATED--------FL 335
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
P+ + +L VV +S H+ ALTESG++Y +G G+LG+
Sbjct: 336 KPEPIPTLGPAVG-VVSVSAG-----GGHSLALTESGQVYGWGFNASGRLGL 381
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H IA++ G VY +G++ GQ G G E + P + + I+ + G + +S
Sbjct: 151 HGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKD 210
Query: 216 GQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVY 273
G+V+ +G +G + + G GT+ P+ + ++ + + G FT +L+ EGR++
Sbjct: 211 GRVWTWG---YGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLF 267
Query: 274 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
TF G +LGH +EP + L+N V ++AAG ++LAL G A +S G
Sbjct: 268 TFGNGEAGQLGHGERGLCLEPSVV--PLDN--VKEVAAGGAHMLALT--KDGQA-WSWGW 320
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LGHG+ D P I L P V V+AG H+ + + G+V WG+
Sbjct: 321 GEDGRLGHGATEDFLKPEPIP-----TLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNA 375
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 428
G LG GNE P +++AL D + + G D++ F+
Sbjct: 376 SGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 207
+ AG H +A+T G +S+G G+LGHG TE+ +P PI +L + ++ +AG G
Sbjct: 298 EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGG 357
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
++ ++++GQVY +G ++ G G + + V +P L+++L + V++A G
Sbjct: 358 HSLALTESGQVYGWGFNASGRLGLGNESS--VMTPTLIKALADKRVLRAICG 407
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 72/244 (29%)
Query: 325 GMAVYSVGCGLGGKLGHGS----------------------------------------- 343
G VY+ G G +LG G
Sbjct: 52 GQGVYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYW 111
Query: 344 -----------RTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
R D++ +P L E Q L + V + G H + ++G V WG +
Sbjct: 112 GSSGVYALLPMRRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIWGNSEF 169
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G G GN+E + +P ++ D + V+ G + VS+DG V+++G G LGHN
Sbjct: 170 GQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGT 229
Query: 451 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDK 509
D L P+ +T ++ E + +++ T L E+ G+L+ FG G+
Sbjct: 230 ED--------ELKPKELTVIR--GEGISRVTCGTDF-----TGLLNETEGRLFTFGNGEA 274
Query: 510 GQLG 513
GQLG
Sbjct: 275 GQLG 278
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GHS+A+T G VY +G N+SG+LG G P I++L R+++A G ++
Sbjct: 354 AGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLF 413
Query: 212 ISDA 215
I+ A
Sbjct: 414 ITQA 417
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 31/340 (9%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ S G ++++G N GQLG +T + P + +L + +AG ++ +
Sbjct: 747 GENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAV--SAGENHSLAL 804
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G V+AFG + +G+ G ++ +P V+ L + + A G F+ L +G V
Sbjct: 805 KSDGTVWAFGYNGYGQLGDGTTSSQR--TPVQVKDLTGVVAIAA--GKDFSLALKSDGTV 860
Query: 273 YTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
+ SWG + LG+ T P + + V IAAG + +AL S V++
Sbjct: 861 W--SWGQNTYGELGNGTTTRSSVPVQVALLTD---VKAIAAGDYHGVALKKDGS---VFA 912
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG+ S + P Q + ++ + AAG +H + DG V +WG+ Y
Sbjct: 913 WGYNGNGELGNSSTISQSTPV---QSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGY 967
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 450
G LG GN SVP + L + +I A G+ + DG +YS+G + LG+
Sbjct: 968 GQLGSGNNTSRSVPAAIPGLASMASI--AAGENQSIAYGNDGILYSWGRNANGQLGNGTT 1025
Query: 451 AD--------GQGNRHANVLTPQLVTSLKQVNERVVQISL 482
D G A+ P V+ L+ ++ V ++L
Sbjct: 1026 VDTNVPHKVIGPNINPADTTAPAAVSDLRVSSQNVRSLTL 1065
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 161/361 (44%), Gaps = 42/361 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
H++ + S G V+ +G N GQLG GT+ P + +L G+++I A G T+ +
Sbjct: 700 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRSD 757
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G ++ +G + +G + G T SP V +L N V A G + L +G V+ F
Sbjct: 758 GTLHTWGYNGYG--QLGDDSTTTRYSPVQVSTLTNWTAVSA--GENHSLALKSDGTVWAF 813
Query: 276 SWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ +LG T + P L G VV IAAG + LAL + V+S G
Sbjct: 814 GYNGYGQLGDGTTSSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGT---VWSWG 864
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG+G+ T P ++ L +++ +AAG +H + +DG V WG+ G
Sbjct: 865 QNTYGELGNGTTTRSSVP--VQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYNGNGE 920
Query: 393 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
LG+ + +S P V + +K I A G Y T + DG V+S+G L
Sbjct: 921 LGNSSTISQSTP-VQSGVTGIKGI--AAGPYHTLALKSDGTVWSWGYNGYGQL------- 970
Query: 453 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512
G GN + + P + L S+ + + A G LY++G GQL
Sbjct: 971 GSGNNTSRSV-PAAIPGLA---------SMASIAAGENQSIAYGNDGILYSWGRNANGQL 1020
Query: 513 G 513
G
Sbjct: 1021 G 1021
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG HS+A+ S G V++FG N GQLG GTT + P ++ L G+ I AAG ++
Sbjct: 796 AGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAI--AAGKDFSLA 853
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+++G++++GE G T + P V L ++ + A G++ L ++G
Sbjct: 854 LKSDGTVWSWGQNTYGELGNGT--TTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGS 909
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 331
V+ + + + LG+ + + + P+ + I IAAG + LAL + V+S
Sbjct: 910 VFAWGYNGNGELGNSSTIS--QSTPVQSGVTGIK--GIAAGPYHTLALKSDGT---VWSW 962
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G G+LG G+ T P I + +AAG + G DG + +WG G
Sbjct: 963 GYNGYGQLGSGNNTSRSVPAAIPGLASM----ASIAAGENQSIAYGNDGILYSWGRNANG 1018
Query: 392 CLGHGNEECESVPKVV 407
LG+G +VP V
Sbjct: 1019 QLGNGTTVDTNVPHKV 1034
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 31/168 (18%)
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
L P+ V+ H + DG V WG+ +G LG G SVP V L +K I
Sbjct: 687 LGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMI-- 744
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G+ T + DG ++++G LG D R++ V QV+
Sbjct: 745 AGGENHTVALRSDGTLHTWGYNGYGQLGD----DSTTTRYSPV----------QVS---- 786
Query: 479 QISLTNSIYWNA------HTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+LTN W A H+ AL G ++AFG GQLG ++Q
Sbjct: 787 --TLTN---WTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQ 829
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 14/254 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++AV G ++++G N GQLGHG + PR + +L+ I+AAAG ++++
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119
Query: 213 SDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
++A +VYAFG + FG + G++ K +P +V L+ V G + L + +
Sbjct: 120 TEANKVYAFGSNVFG--QLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQ 177
Query: 272 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG----- 325
+Y++ + +LG H + V H L + V QI+ GY + +A + +G
Sbjct: 178 LYSWGRNDCGQLGLGHYRSSPVPEH--LTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPP 235
Query: 326 -MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
VY+ G G G+LGH P++++ LL VAAG + +A + + ++ T
Sbjct: 236 LEKVYTWGRGEEGQLGHDELYSRCVPKVVQ--TLLARGIRAVAAGGFSSAAIDEAKQLYT 293
Query: 385 WGWGRYGCLGHGNE 398
WG R G LGHG++
Sbjct: 294 WGCSREGQLGHGDD 307
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RP-IRSLQGIRIIQAAA 204
A G H++A+T +G VYS+G ++G LGHG ++ + P RP I S+ I I A
Sbjct: 3 AACGKLHTVALTEEGRVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--AC 59
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T+ + G ++ +G++ +G+ +G K P+ VE+L+ ++AA G +
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHG--DCKTHKLPRRVEALEKKICIKAAAGGQHSL 117
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
VL+ +VY F +LG ++ ++ L V I GY + +AL
Sbjct: 118 VLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALL---K 174
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG---- 380
+YS G G+LG G P + F+ +Q + A V G
Sbjct: 175 SEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVP 234
Query: 381 ---RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
+V TWG G G LGH VPKVVQ L VA G +++ + E +Y++
Sbjct: 235 PLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTW 294
Query: 438 GCGESASLGH 447
GC LGH
Sbjct: 295 GCSREGQLGH 304
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 16/188 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
VYS GC G LGHG+ + P+ +++ + ++ + +A G +H VGQDG + TWG
Sbjct: 19 VYSWGCA-NGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQDGTLWTWG 77
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
+YG LGHG+ + +P+ V+AL I A G + V++E VY+FG LG
Sbjct: 78 RNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLG 137
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ + P +V+ L++ V I+ S H+ AL +S +LY++G
Sbjct: 138 LES-------KVKYSAAPDIVSRLRRSG--VCHITCGYS-----HSMALLKSEQLYSWGR 183
Query: 507 GDKGQLGI 514
D GQLG+
Sbjct: 184 NDCGQLGL 191
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 39/275 (14%)
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQI 309
V AA G T L+ EGRVY++ N A LGH + + P PL+ ++ +I I
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSITT--I 57
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 369
A G + LA+ + +++ G G+LGHG K PR +E + + AAG
Sbjct: 58 ACGEFHTLAVGQDGT---LWTWGRNQYGQLGHGDCKTHKLPRRVEALE--KKICIKAAAG 112
Query: 370 AWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
H+ V+ + +V +G +G LG + + P +V L H+ G + +
Sbjct: 113 GQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMAL 172
Query: 429 SEDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
+ +YS+G CG+ LGH + + P+ +T K+ + + ++
Sbjct: 173 LKSEQLYSWGRNDCGQ-LGLGH----------YRSSPVPEHLTMFKKSQVQQISCGYDHN 221
Query: 486 IYWNAHTFALTESG-------KLYAFGAGDKGQLG 513
I F +G K+Y +G G++GQLG
Sbjct: 222 I-----AFVSEYAGPGVPPLEKVYTWGRGEEGQLG 251
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 23/157 (14%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-----VVQALNDVKAIHV 418
V A G H + ++GRV +WG G LGHGN + + +PK ++ ++ + I
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMPSITTI-- 57
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G++ T V +DG ++++G + LGH G H P+ V +L E+ +
Sbjct: 58 ACGEFHTLAVGQDGTLWTWGRNQYGQLGH-----GDCKTHK---LPRRVEAL----EKKI 105
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
I H+ LTE+ K+YAFG+ GQLG+E
Sbjct: 106 CIKAAAG---GQHSLVLTEANKVYAFGSNVFGQLGLE 139
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 45/331 (13%)
Query: 200 IQAAAGAGRTMLISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+ AA G T+ +++ G+VY++G + G Q L+ S+ +I + A
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--A 58
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAG 312
G F T + ++G ++T+ +LGH H P VE LE ++ AAG
Sbjct: 59 CGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVE------ALEKKICIKAAAG 112
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAW 371
+ L L VY+ G + G+LG S+ P ++ + + + + G
Sbjct: 113 GQHSLVLT---EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGV--CHITCGYS 167
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 430
H+ + + ++ +WG G LG G+ VP+ + + ++ G D+ VSE
Sbjct: 168 HSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227
Query: 431 DG--------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 482
VY++G GE LGH+ + + P++V +L R V
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELY--------SRCVPKVVQTLLARGIRAVAAGG 279
Query: 483 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+S A+ E+ +LY +G +GQLG
Sbjct: 280 FSSA-------AIDEAKQLYTWGCSREGQLG 303
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-HGTTEEEWRPRPIRSLQGIR 198
EA ++ +A AG HS+ +T VY+FGSN GQLG + P + L+
Sbjct: 99 EALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSG 158
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
+ G +M + + Q+Y++G++ G+ G + V P+ + K V Q +
Sbjct: 159 VCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPV--PEHLTMFKKSQVQQISC 216
Query: 259 GNFFTAVLSRE---------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 309
G E +VYT+ G + +LGH + P ++ TL + +
Sbjct: 217 GYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVP-KVVQTLLARGIRAV 275
Query: 310 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
AAG + A +Y+ GC G+LGHG
Sbjct: 276 AAGG---FSSAAIDEAKQLYTWGCSREGQLGHG 305
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 21/299 (7%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA +G H++ + + VV++ G NS GQLG +P PI++L + + + G
Sbjct: 33 QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEH 92
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++ + G+V+A+G S G+ G + ++ PQ +++L I ++Q + G + + LS+
Sbjct: 93 SLAVCHKGKVFAWGVGSDGQLGTG-KFEEICFIPQKIKALTGIKIIQISCGYYHSLALSK 151
Query: 269 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
+G+V FSWG ++ +LG E P+ P + +LE IP+ Q+AAG + AL+ +
Sbjct: 152 DGQV--FSWGKNSHGQLGLGQEFPSQASPQR-VRSLEGIPLAQVAAGGAHSFALSLSGTS 208
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
+ G G+ PR + L NL V ++ G H AV+ Q+ +V T+
Sbjct: 209 FGWGNNSAGQLAFSGNNVLVQSYKPRSVG--ALKNLGVVYISCGYEHTAVLTQNDQVFTF 266
Query: 386 GWGRYGCLGHGNEECESVPKVVQALN------DVKAIHVATGDYTTFVVSEDGDVYSFG 438
G +G LGH + P++V+ + D + H YTT G V SFG
Sbjct: 267 GDNSFGQLGHNGVSQTTGPQLVEGIGGPVSQIDCGSYHTLAYVYTT------GQVVSFG 319
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
++Q A+G + L L + V++ G GG+LG K P I+ L+NL +
Sbjct: 31 LLQAASGERHALLLL---TNQVVHACGDNSGGQLGRRGAPSGKQPEPIQA--LVNLPVDL 85
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 424
V+ G H+ V G+V WG G G LG G EE +P+ ++AL +K I ++ G Y
Sbjct: 86 VSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYH 145
Query: 425 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 484
+ +S+DG V+S+G L G G + +PQ V SL+ I L
Sbjct: 146 SLALSKDGQVFSWGKNSHGQL-------GLGQEFPSQASPQRVRSLE-------GIPLAQ 191
Query: 485 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
AH+FAL+ SG + +G GQL N + P V
Sbjct: 192 VAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSV 236
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 19/273 (6%)
Query: 199 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
++QAA+G +L+ V+A G +S G+ G +G P+ +++L N+ V +
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQ--LGRRGAPSGKQPEPIQALVNLPVDLVSC 88
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G + + +G+V+ + G+D +LG + L I ++QI+ GY + LA
Sbjct: 89 GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLA 148
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
L+ V+S G G+LG G + P+ + + + L VAAG H+ +
Sbjct: 149 LS---KDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALS 203
Query: 378 QDGRVCTWGWGRYGCLGH--GNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDV 434
G WG G L N +S P+ V AL ++ ++++ G T V++++ V
Sbjct: 204 LSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQV 263
Query: 435 YSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++FG LGHN ++ G PQLV
Sbjct: 264 FTFGDNSFGQLGHNGVSQTTG--------PQLV 288
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 312
++QAA G +L V+ + +LG P+ +P P+ L N+PV ++ G
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPI-QALVNLPVDLVSCG 89
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAW 371
+ LA+ C V++ G G G+LG G + P+ I+ L ++ + ++ G +
Sbjct: 90 KEHSLAV-CHKG--KVFAWGVGSDGQLGTGKFEEICFIPQKIKA--LTGIKIIQISCGYY 144
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H+ + +DG+V +WG +G LG G E ++ P+ V++L + VA G +F +S
Sbjct: 145 HSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 204
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G SFG G +++ +A N P+ V +LK + VV IS
Sbjct: 205 SGT--SFGWGNNSA---GQLAFSGNNVLVQSYKPRSVGALKNLG--VVYISCGYE----- 252
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT LT++ +++ FG GQLG
Sbjct: 253 HTAVLTQNDQVFTFGDNSFGQLG 275
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +G+NS+GQL G+ + ++PR + +L+ + ++ +
Sbjct: 190 AQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISC 249
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G T +++ QV+ FG +SFG + G G T PQLVE + V Q G++ T
Sbjct: 250 GYEHTAVLTQNDQVFTFGDNSFG--QLGHNGVSQTTGPQLVEGIGGP-VSQIDCGSYHTL 306
Query: 264 AVLSREGRVYTF 275
A + G+V +F
Sbjct: 307 AYVYTTGQVVSF 318
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 163/367 (44%), Gaps = 34/367 (9%)
Query: 150 AIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 207
AIA G H+ A+ S G V+ +G N+SGQLG G+ + P + L G+ I AAG
Sbjct: 415 AIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETI--AAGGW 472
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
T ++ +G V+ +G+++ G+ G T +P V L + V A G++ T L+
Sbjct: 473 HTCALTSSGGVWCWGRNNSGQ--LGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCALT 529
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G V+ + + +LG T + P + G + V IAAG + AL S
Sbjct: 530 GSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTV--IAAGRFHTCALT---SSGG 584
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+ G G+LG G+ T+ P + L +AAG WH + G V WG
Sbjct: 585 VWCWGANFDGQLGDGTTTNRTTPVAVSG---LPSGVTAIAAGGWHTCALTSSGEVWCWGD 641
Query: 388 GRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
YG LG G S P V L + V AI A G T ++ G+V+ +G LG
Sbjct: 642 NYYGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGWEHTCALTSSGEVWCWGDNYYGQLG 699
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
DG N TP V+ L V I+ +Y HT ALT SG + +G
Sbjct: 700 -----DGT---TTNRSTPGAVSGLP---SGVTAIAA--GVY---HTCALTGSGGVMCWGN 743
Query: 507 GDKGQLG 513
GQLG
Sbjct: 744 NGDGQLG 750
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 165/375 (44%), Gaps = 33/375 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+ S G V+ +G N+SGQLG GTT P + L G+ I AAG T
Sbjct: 367 AGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAI--AAGGLHTC 424
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ +G V+ +G ++ G+ G ++P V L + V A G + T L+ G
Sbjct: 425 ALMSSGGVWCWGLNNSGQLGDGSD--TDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSG 481
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + N +LG + + P + G V IAAG + AL SG V+
Sbjct: 482 GVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGDYHTCAL--TGSG-GVWC 536
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G L G+LG G+ TD P + L V+AAG +H + G V WG
Sbjct: 537 WGYNLSGQLGDGTTTDRSTPVAVSG---LTSGVTVIAAGRFHTCALTSSGGVWCWGANFD 593
Query: 391 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G + P V L + V AI A G + T ++ G+V+ +G LG
Sbjct: 594 GQLGDGTTTNRTTPVAVSGLPSGVTAI--AAGGWHTCALTSSGEVWCWGDNYYGQLG--- 648
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG N TP V+ L V I+ W HT ALT SG+++ +G
Sbjct: 649 --DGT---TTNRSTPGAVSGLP---SGVTAIAAG----WE-HTCALTSSGEVWCWGDNYY 695
Query: 510 GQLGIELVNNQTERG 524
GQLG N++ G
Sbjct: 696 GQLGDGTTTNRSTPG 710
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 153/364 (42%), Gaps = 32/364 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+T G V +G+N SGQLG+G T P + L G+ I AAG T
Sbjct: 111 AGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI--AAGGDHTC 168
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+ +G V +G + +G+ G T +P V L + V A G T L+ G
Sbjct: 169 ALMSSGGVMCWGDNYYGQLGDGT--TTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSG 225
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
V+ + + +LG T +G L + + IAAG + AL S V+
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALM---SSGGVWC 281
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS TD P + L +AAG +H + G V WG +
Sbjct: 282 WGRNDSGQLGDGSDTDSSTPVAVSG---LPSGVTAIAAGDYHTCALTGSGEVWCWGGNGF 338
Query: 391 GCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LG G S P V L + V+ I A GDY T + G V+ +G S LG
Sbjct: 339 GQLGDGTTTARSTPAAVSGLPSGVETI--AAGDYHTCALMSSGGVWCWGRNNSGQLG--- 393
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
DG + TP V+ L + L HT AL SG ++ +G +
Sbjct: 394 --DGTTTARS---TPAAVSGLPSGVTAIAAGGL--------HTCALMSSGGVWCWGLNNS 440
Query: 510 GQLG 513
GQLG
Sbjct: 441 GQLG 444
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 159/384 (41%), Gaps = 41/384 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+T G V +G N GQLG GT P + L G+ I AAG T
Sbjct: 60 AGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTAI--AAGNYHTC 117
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V +G + G+ G+ T ++P V L + AA G+ A++S G
Sbjct: 118 ALTGSGGVRCWGANYSGQLGNGL--TFGRSTPGAVSGLPSGVTAIAAGGDHTCALMSSGG 175
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
WG++ +LG T N P + G V IAAG + AL V
Sbjct: 176 ---VMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSG--VTAIAAGGLHTCALTGSGE---V 227
Query: 329 YSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+ G G+LG G+ T + P + L +AAG H + G V WG
Sbjct: 228 WCWGYNYYGQLGDGTTTYSRSTPAAVGG---LPSGMTAIAAGGLHTCALMSSGGVWCWGR 284
Query: 388 GRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G LG G++ S P V L + V AI A GDY T ++ G+V+ +G G
Sbjct: 285 NDSGQLGDGSDTDSSTPVAVSGLPSGVTAI--AAGDYHTCALTGSGEVWCWG-----GNG 337
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ DG + TP V+ L E + + HT AL SG ++ +G
Sbjct: 338 FGQLGDGTTTARS---TPAAVSGLPSGVETIAAG--------DYHTCALMSSGGVWCWGR 386
Query: 507 GDKGQLGIELVNNQTERGNPERVD 530
+ GQLG T R P V
Sbjct: 387 NNSGQLGD---GTTTARSTPAAVS 407
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 137/340 (40%), Gaps = 38/340 (11%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
LQG+ I AAG T ++ +G V +G + FG+ G T+ ++P V L + V
Sbjct: 52 LQGVTAI--AAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTR--STPGAVSGLPS-GV 106
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAA 311
A GN+ T L+ G V + +LG+ P G + +P V IAA
Sbjct: 107 TAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTP----GAVSGLPSGVTAIAA 162
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + AL S V G G+LG G+ T+ + P + L +AAG
Sbjct: 163 GGDHTCALM---SSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSG---LPSGVTAIAAGGL 216
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSE 430
H + G V WG+ YG LG G S P V L +A G T +
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMS 275
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
G V+ +G +S LG + D TP V+ L V I+ +
Sbjct: 276 SGGVWCWGRNDSGQLGDGSDTDSS--------TPVAVSGLP---SGVTAIAAG-----DY 319
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
HT ALT SG+++ +G GQLG T R P V
Sbjct: 320 HTCALTGSGEVWCWGGNGFGQLGD---GTTTARSTPAAVS 356
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 117/258 (45%), Gaps = 22/258 (8%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGRTM 210
AG H+ A+T G V+ +G N SGQLG GTT + P + L G+ +I AAG T
Sbjct: 520 AGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVI--AAGRFHTC 577
Query: 211 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
++ +G V+ +G + G+ G T T+P V L + V A G + T L+ G
Sbjct: 578 ALTSSGGVWCWGANFDGQLGDGT--TTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSG 634
Query: 271 RVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGM 326
V+ WG++ +LG T N P G + +P V IAAG+ + AL S
Sbjct: 635 EVW--CWGDNYYGQLGDGTTTNRSTP----GAVSGLPSGVTAIAAGWEHTCALT---SSG 685
Query: 327 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V+ G G+LG G+ T+ P + L +AAG +H + G V WG
Sbjct: 686 EVWCWGDNYYGQLGDGTTTNRSTPGAVSG---LPSGVTAIAAGVYHTCALTGSGGVMCWG 742
Query: 387 WGRYGCLGHGNEECESVP 404
G LG G + P
Sbjct: 743 NNGDGQLGDGRPLYRTTP 760
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 153/292 (52%), Gaps = 23/292 (7%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L GI+IIQ + G ++
Sbjct: 105 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSLA 164
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+S+ GQV+++GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 165 LSEDGQVFSWGKNSHGQLGLGKE-VPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 223
Query: 272 VYTFSWGNDA--RLGHHTEPNDVEPH-PL-LGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+F WG+++ +L V+ + PL +G L+ + VV I+ G + L A
Sbjct: 224 --SFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLT---QNGA 278
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWG 386
VY+ G G+LGH + +++ P+ +E+ L Q + G++H A V G+V ++G
Sbjct: 279 VYTFGANSSGQLGHSA--EQRGPQCVERIDGLVSQ---IDCGSYHTLAYVYTTGQVVSFG 333
Query: 387 WGRYGCLGHGNEECES----VPKVVQA--LNDVKAIHVATGDYTTFVVSEDG 432
G + E + + ++ A L D++ H+ G + FV + G
Sbjct: 334 HGPSCTSNSTHSETVTDNADISCLISADDLVDIQVKHIFAGTHANFVTTYQG 385
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 15/263 (5%)
Query: 187 RPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
+P I++ + +R+ + G ++ + G+V+A+G S G+ G + T PQ ++
Sbjct: 87 KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFT-PQKIK 145
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLEN 303
+L I ++Q + G + + LS +G+V FSWG ++ +LG E P+ P + +LE
Sbjct: 146 ALAGIKIIQVSCGYYHSLALSEDGQV--FSWGKNSHGQLGLGKEVPSQTSPQRV-RSLEG 202
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQ 362
IP+ Q+AAG + AL+ SG + + G G+L G++ + + + L L
Sbjct: 203 IPLAQVAAGGAHSFALSL--SGTS-FGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLG 259
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 422
V ++ G+ H AV+ Q+G V T+G G LGH E + P+ V+ ++ + + + G
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAE--QRGPQCVERIDGLVS-QIDCGS 316
Query: 423 YTTFV-VSEDGDVYSFGCGESAS 444
Y T V G V SFG G S +
Sbjct: 317 YHTLAYVYTTGQVVSFGHGPSCT 339
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 6/179 (3%)
Query: 164 GVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 222
G ++++G NS GQLG G P+ + L G+ ++Q +AG +M +S G VY++G
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972
Query: 223 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 282
K+ FG + G+ T+ SP L+ +L + V A G TA+L+++G V+TF G +
Sbjct: 973 KNDFG--QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 283 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
LGH + +++ P + L N V QIA G + LA + V++ G G G+LG+
Sbjct: 1031 LGHSSTRDELRPCLVTELLGN-RVTQIACGRWHTLAYVSELG--KVFAFGSGKNGQLGN 1086
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 350 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
P+++E L + V ++AG H+ + G V +WG +G LG G+ E + P +++A
Sbjct: 938 PQIVEH--LAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRA 995
Query: 410 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 469
L+ K +A G T ++++DG V++FG G+ LGH++ D L P LVT
Sbjct: 996 LDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTRDE--------LRPCLVTE 1047
Query: 470 LKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLGIELVNNQ 520
L + RV QI+ W HT A ++E GK++AFG+G GQLG +NQ
Sbjct: 1048 L--LGNRVTQIACGR---W--HTLAYVSELGKVFAFGSGKNGQLGNCGTHNQ 1092
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G V+S+G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 154 QVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGA 213
Query: 208 RTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ +S +G + +G +S G+ A G + P V +LK + VV + G+ TAVL
Sbjct: 214 HSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVL 273
Query: 267 SREGRVYTFSWGNDARLGHHTE 288
++ G VYTF + +LGH E
Sbjct: 274 TQNGAVYTFGANSSGQLGHSAE 295
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG HS+A++ G VYS+G N GQLG G TE + P +R+L ++ A G
Sbjct: 951 QISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSH 1010
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 267
T L++ G V+ FG +G + G T+ P LV L V Q A G + T A +S
Sbjct: 1011 TALLTQDGLVFTFGAGKYG--QLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVS 1068
Query: 268 REGRVYTFSWGNDARLGH---HTEPN 290
G+V+ F G + +LG+ H +PN
Sbjct: 1069 ELGKVFAFGSGKNGQLGNCGTHNQPN 1094
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 386
V++ G G G+LG G + P+ I+ L ++ + V+ G +H+ + +DG+V +WG
Sbjct: 118 VFAWGAGSEGQLGIGEFKERSFTPQKIKA--LAGIKIIQVSCGYYHSLALSEDGQVFSWG 175
Query: 387 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
+G LG G E ++ P+ V++L + VA G +F +S G SFG G S S
Sbjct: 176 KNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGT--SFGWG-SNSA 232
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 505
G A++ + P V +LK + VV IS + HT LT++G +Y FG
Sbjct: 233 GQLALSGTKAP--VQRYKPLSVGALKTLG--VVYISCGSE-----HTAVLTQNGAVYTFG 283
Query: 506 AGDKGQLGIELVNNQTERGNP---ERVD 530
A GQLG + E+ P ER+D
Sbjct: 284 ANSSGQLG-----HSAEQRGPQCVERID 306
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 36/277 (12%)
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLL 298
+ P+ +++ + + V + G + + +GRV+ + G++ +LG + P +
Sbjct: 86 SKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKI- 144
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIE 354
L I ++Q++ GY + LAL+ V+S G G+LG G S+T + R +E
Sbjct: 145 KALAGIKIIQVSCGYYHSLALS---EDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLE 201
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALN 411
L VAAG H+ + G WG G L + P V AL
Sbjct: 202 GIPLAQ-----VAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALK 256
Query: 412 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
+ ++++ G T V++++G VY+FG S LGH+A G PQ V +
Sbjct: 257 TLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAEQRG----------PQCV---E 303
Query: 472 QVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAG 507
+++ V QI + HT A + +G++ +FG G
Sbjct: 304 RIDGLVSQIDCG-----SYHTLAYVYTTGQVVSFGHG 335
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 9/135 (6%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE---EEWRPRPIRSLQGIRIIQAAA 204
+Q AG HS A++ G + +GSNS+GQL T+ + ++P + +L+ + ++ +
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISC 265
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 263
G+ T +++ G VY FG +S G+ + + PQ VE + + V Q G++ T
Sbjct: 266 GSEHTAVLTQNGAVYTFGANSSGQLGHSAEQ----RGPQCVERIDGL-VSQIDCGSYHTL 320
Query: 264 AVLSREGRVYTFSWG 278
A + G+V +F G
Sbjct: 321 AYVYTTGQVVSFGHG 335
>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
Length = 453
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 43/330 (13%)
Query: 203 AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGN 260
G TML+S + Q+Y+ G SF + + T + P LV LK+ + Q A G
Sbjct: 101 VCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGR 160
Query: 261 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL----LGTLENIPVVQIAAGYCYL 316
T VL+ + RV++F G++ +LG + N +P P+ L L NI +++ G+ +
Sbjct: 161 RHTLVLTEDFRVFSFGVGSEYQLGVGSTEN--QPLPVEIESLSKLGNI--IKLECGWGHS 216
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAV 375
L L S +++ G + GHG + H P++I+ N + + G+
Sbjct: 217 LVLT---SDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT----NYKFKNIFTGSDFNLA 269
Query: 376 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--------DVKAIH----VATGDY 423
+ DGRVC+WG G +G LGHG+ + PK++Q++ + I+ VA G
Sbjct: 270 ITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFS 329
Query: 424 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 483
++ DG + + G + LG D N L P + E+VV++S
Sbjct: 330 HALIIDNDGKLLTLGWNGNGQLGSGVKGD-------NHLVPTKL-EFDFDGEKVVKVSAG 381
Query: 484 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ H+ +TESGKLY +G G+KG+LG
Sbjct: 382 RN-----HSACITESGKLYIWGNGNKGKLG 406
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 40/360 (11%)
Query: 146 ENSQAIAGPGHSIAVTS-KGVVYSFGSNSSGQLGHGTTEEEWR---PRPIRSLQGIRIIQ 201
E + G H++ V+ K +YS G S + E ++ P + L+ +I Q
Sbjct: 96 ECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQ 155
Query: 202 AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVVQAAI 258
A G T+++++ +V++FG S E + GV T+ P +ESL NI ++
Sbjct: 156 VAGGRRHTLVLTEDFRVFSFGVGS--EYQLGVGSTENQPLPVEIESLSKLGNIIKLECGW 213
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 318
G+ + VL+ +G ++T+ + D++ GH + ++ T N I G + LA
Sbjct: 214 GH--SLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLA 269
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------LLNLQPV----VVAA 368
+ + V S G G G+LGHG + + P+LI+ Q L+N + +VA
Sbjct: 270 IT---NDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVAC 326
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVP-KVVQALNDVKAIHVATGDYTTF 426
G HA ++ DG++ T GW G LG G + + VP K+ + K + V+ G +
Sbjct: 327 GFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSA 386
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ-----VNERVVQIS 481
++E G +Y +G G LG+ G + LTP + + + N++V+ IS
Sbjct: 387 CITESGKLYIWGNGNKGKLGN-------GKSVGDQLTPLELIDIDENNTDPSNQKVLNIS 439
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---------RIIQ 201
G ++A+T+ G V S+GS GQLGHG T+ P+ I+S+Q + RI +
Sbjct: 261 FTGSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYE 320
Query: 202 ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
A G ++I + G++ G + G+ GV+G + +L VV+ +
Sbjct: 321 YKMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSA 380
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-VEPHPLLGTLENIPVVQIAAGYCYLL 317
G +A ++ G++Y + GN +LG+ D + P L+ EN
Sbjct: 381 GRNHSACITESGKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDEN-------------- 426
Query: 318 ALACQPSGMAVYSVGCGL 335
PS V ++ CG
Sbjct: 427 --NTDPSNQKVLNISCGF 442
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Query: 328 VYSVGCGLGGKLGHGSR--TDEKHPRLIEQFQ-----------LLNLQPVVVAAGAWHAA 374
+YS GCG+ GKLG + E P + +F NL+ + G +H
Sbjct: 49 LYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGHYHTM 108
Query: 375 VVGQD-GRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDYTTFVVSE 430
+V ++ ++ + GW + + N+E +P +V L D K VA G T V++E
Sbjct: 109 LVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTLVLTE 168
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
D V+SFG G LG + N P + SL ++ ++++ W
Sbjct: 169 DFRVFSFGVGSEYQLGVGST--------ENQPLPVEIESLSKLG-NIIKLECG----W-G 214
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
H+ LT G ++ +G Q G
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTG 237
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Query: 411 NDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANV--LTPQLV 467
++++ + G Y T +VS++ D +YS CG ++ + + + N+ N + P LV
Sbjct: 93 DNLECKDIVCGHYHTMLVSKEKDQLYS--CGWTSFVAMDRV-----NKETNFKSIIPSLV 145
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
T LK ++ Q++ HT LTE ++++FG G + QLG+ NQ
Sbjct: 146 TPLKDF--KIKQVAGGRR-----HTLVLTEDFRVFSFGVGSEYQLGVGSTENQ 191
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 17/289 (5%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKD 224
V+ G+N G LG G + PR + SL G +I + G+G +L + G+V+ +G +
Sbjct: 43 VFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHN 102
Query: 225 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 284
++ + G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G
Sbjct: 103 AYSQLGNGTTNHGLVPC-HISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
Query: 285 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 344
+ N P + +L+N VV IA G + ++A +G VY G G+LG GS
Sbjct: 162 SGSTANQPIPRRVTSSLQNKVVVNIACGQ--MCSMAVVDNG-EVYVWGYNGNGQLGLGSS 218
Query: 345 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 404
++ P + L ++ VA G H V+ +G+V WG YG LG GN+ +S P
Sbjct: 219 GNQSTPC---RLALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 275
Query: 405 KVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFG-C-GESASLGH 447
V D + A H A +T+ ++ G VY +G C G+S L H
Sbjct: 276 TPVVVEKDRIIEIAACHSA---HTSAAKTQGGHVYMWGQCRGQSVVLPH 321
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 44/318 (13%)
Query: 106 KRAIFKPMTEAERQDLKQKC--GGSWKLVL------RFLLAGEACC-------------- 143
K IF +E E Q ++Q C G + VL + G CC
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEP 65
Query: 144 RRENS---QAIA------GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS- 193
RR +S + IA GP H + T++G V+++G N+ QLG+GTT P I +
Sbjct: 66 RRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L +I+ A G+ +++++ G+V+A+G ++ G+ G + + ++ SL+N V
Sbjct: 125 LSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPR-RVTSSLQNKVV 183
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V A G + + G VY + + + +LG + N P L L+ + V ++A GY
Sbjct: 184 VNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRL--ALQGVRVQRVACGY 241
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAAGAW 371
+ L L + VY+ G G+LG G+++++ +P ++E+ +++ + A
Sbjct: 242 AHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIE---IAACHSAH 295
Query: 372 HAAVVGQDGRVCTWGWGR 389
+A Q G V WG R
Sbjct: 296 TSAAKTQGGHVYMWGQCR 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V++ G +LG+G+ P I L N + VA G++H+ V+ DG V WG+
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKHVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 388 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G +G G+ + +P +V +L + +++A G + V ++G+VY +G + LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLG 214
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ GN+ TP L RV +++ AHT LT+ G++YA+GA
Sbjct: 215 LGS----SGNQS----TP---CRLALQGVRVQRVACG-----YAHTLVLTDEGQVYAWGA 258
Query: 507 GDKGQLGIELVNNQT 521
GQLG +NQ+
Sbjct: 259 NSYGQLGTGNKSNQS 273
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 10/298 (3%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
++ G H+ A+TS G V FG+ GQLG G T+ P+ + L G +++ AAG
Sbjct: 47 AEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLE 106
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
++ ++++G +YAFG + G+ G T +PQ V L + Q A G TAVL+
Sbjct: 107 HSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLT 166
Query: 268 REGRVYTFSWGNDARL---GHHTE-PNDVEPHPLLGT-LENIPVVQIAAGYCYLLALACQ 322
G ++ F D L GH E P V P L T L+ VVQI G + +AL
Sbjct: 167 SSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALT-- 224
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
+ VY G G+LG G + P L+ + L + + VA G H V V
Sbjct: 225 -AAGGVYCWGENGRGQLGTGDTQNRYTPSLVCK-PLSAFKCIHVACGGQHTIAVTDCDDV 282
Query: 383 CTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
+G R+G LG G VP + L + + G + T + + G+ Y GC
Sbjct: 283 YGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMGC 340
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 386
V++VG G+LG+G+ T FQL Q + V G H + DG V +G
Sbjct: 10 VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS-- 444
G G LG GN + S P+ V L+ + +A G + ++E GD+Y+FG S
Sbjct: 70 NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLG 129
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGHN A Q TPQ V L + ++ Q++ HT LT SG+L+ F
Sbjct: 130 LGHNFTAKEQ--------TPQKVPPLGRA--KITQLACGQD-----HTAVLTSSGELFMF 174
Query: 505 GAGDKGQLGI 514
G G LG+
Sbjct: 175 GNNRDGALGV 184
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 267 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQP 323
SR R ++ G +++ LG+ T P P + P +IA +C Y A
Sbjct: 3 SRRERSLVWAVGGNSKGQLGNGT-PTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTS 61
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
G V G G+ G+LG G+ +P ++ LL+ + VV +AAG H+ + + G +
Sbjct: 62 DG-DVLGFGNGVKGQLGIGNTDSHSNP---QRVHLLSGKGVVKMAAGLEHSLALTESGDL 117
Query: 383 CTWG---WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 439
+G G+ G LGH E P+ V L K +A G T V++ G+++ FG
Sbjct: 118 YAFGDNLSGQLG-LGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGN 176
Query: 440 GESASLGHNAIADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
+LG G N ++ PQLVT LK + VVQI HT ALT
Sbjct: 177 NRDGALG----VAGHANEGPPIVASAPQLVTGLK--GKHVVQIGCGLQ-----HTVALTA 225
Query: 498 SGKLYAFGAGDKGQLGIELVNNQ 520
+G +Y +G +GQLG N+
Sbjct: 226 AGGVYCWGENGRGQLGTGDTQNR 248
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 38/275 (13%)
Query: 253 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVV 307
+ + G T L+ +G V F G +LG H+ P V H L G VV
Sbjct: 46 IAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRV--HLLSGK----GVV 99
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVV 365
++AAG + LAL SG +Y+ G L G+LG H E+ P+ + +
Sbjct: 100 KMAAGLEHSLALT--ESG-DLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKI--TQ 154
Query: 366 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEE---CESVPKVVQALNDVKAIHVA 419
+A G H AV+ G + +G R G LG H NE S P++V L + +
Sbjct: 155 LACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIG 214
Query: 420 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 479
G T ++ G VY +G LG D Q NR+ L + +++ K ++
Sbjct: 215 CGLQHTVALTAAGGVYCWGENGRGQLG---TGDTQ-NRYTPSLVCKPLSAFKCIH----- 265
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
HT A+T+ +Y FG+ GQLG+
Sbjct: 266 -----VACGGQHTIAVTDCDDVYGFGSDRHGQLGL 295
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 181/382 (47%), Gaps = 39/382 (10%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+A+ S+G ++++G N GQLG GT + + P ++ I G +M +
Sbjct: 166 HSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSL 225
Query: 216 GQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 274
G+V+A+G + GE G + V P V +L +I + A G ++ LS +G V T
Sbjct: 226 GRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISA--GGEYSIALSSDGSVLT 283
Query: 275 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVG 332
+ +D +LG+ +T+ N V + ++P+++ I+AG + LA+ VY+ G
Sbjct: 284 WGANSDGQLGNGNTDQNSVPTK-----ISSLPLMKGISAGEAHSLAVT---EDGFVYAWG 335
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYG 391
G++G+G ++ + ++ Q+ L + V AGA + +G DGRV WG G
Sbjct: 336 LNDEGQIGNGEKSADNP--VLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGLNDEG 393
Query: 392 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 451
LG G + P V+ N K VA G + + +G V S+G + LG +
Sbjct: 394 QLGDGTNTNSTTP--VEVTNLAKISAVACGSDHSLAI-RNGKVKSWGLNDEGQLGDGST- 449
Query: 452 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
R ++ P VT L +V ++ S H+ A+T G +Y +G GQ
Sbjct: 450 -----RSSSA--PLDVTGLSD----IVYVAAGES-----HSLAITSKGNIYVWGLNGDGQ 493
Query: 512 LGIELVNNQTERGNPERVDIDL 533
LG N++ R P+ +D++L
Sbjct: 494 LGDG--TNRSSR-TPKTIDLNL 512
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG +SIA++S G V ++G+NS GQLG+G T++ P I SL ++ I +AG ++
Sbjct: 267 AGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLMKGI--SAGEAHSLA 324
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 270
+++ G VYA+G + G+ G + V +P V+ L +I V A G F+ L +G
Sbjct: 325 VTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCA--GATFSLALGIDG 382
Query: 271 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
RV+ + ++ +LG T N P + + + +A G + LA+ V S
Sbjct: 383 RVWAWGLNDEGQLGDGTNTNSTTPVEVTNLAK---ISAVACGSDHSLAI----RNGKVKS 435
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 390
G G+LG GS P + + V VAAG H+ + G + WG
Sbjct: 436 WGLNDEGQLGDGSTRSSSAPLDVTGLSDI----VYVAAGESHSLAITSKGNIYVWGLNGD 491
Query: 391 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G LG G PK + V A+ G+ T + D G+S +
Sbjct: 492 GQLGDGTNRSSRTPKTIDLNLGVTAVE-GPGECETDDIEADPKKLKLKVGKSTEV 545
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 11/287 (3%)
Query: 159 AVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQV 218
A T + V+ +G N QLG + P +L + ++Q A G+ ++ G+V
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 480
Query: 219 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFS 276
YA G+ + G G+ + V P+ + +L + V + A+ G L+ +G+V+++
Sbjct: 481 YACGEATNGRLGLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 539
Query: 277 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 336
G+D +LGH + N +P L+ L+ + IA G + AL S +Y+ G G
Sbjct: 540 EGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEY 595
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLG 394
G+LGHG T + P++++ LL + + VA G+ A + +G V +WG G +G LG
Sbjct: 596 GRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 653
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 441
G E ++P+ ++ LN + G + +++ G V+++G G
Sbjct: 654 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGR 700
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 271 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 425 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 481
Query: 330 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 482 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 541
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 542 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 601
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ L P++V L + RV+Q++ + +A T ALT+ G ++++G GD
Sbjct: 602 D--------NTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 648
Query: 509 KGQLG 513
G+LG
Sbjct: 649 FGKLG 653
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 13/246 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLQGIRIIQAAAGAG 207
Q G AVT +G VY+ G ++G+LG G + PR I +L + + A +G
Sbjct: 463 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSG 522
Query: 208 ---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
T L D G+V+++G+ G + G P+L+E+LK + A G+ +A
Sbjct: 523 GRHATALTVD-GKVFSWGEGDDG--KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 579
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
L+ G +YT+ G RLGH ++P ++ L V+Q+A G LA
Sbjct: 580 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALTDE 638
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 383
G+ V+S G G GKLG G P+ IE+ LN Q V + GA + + + G V
Sbjct: 639 GL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGVVW 694
Query: 384 TWGWGR 389
TWG GR
Sbjct: 695 TWGKGR 700
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 20/300 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ VT G +Y FGSN+ GQLG +P +++L+ +++ AA G T++
Sbjct: 45 GDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVY 104
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAVLSREGR 271
++ G++Y+ G +S E + G+ T TS Q + + + Q + G+ +A L+ +G+
Sbjct: 105 TEQGKLYSSGGNS--EGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGK 162
Query: 272 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMA 327
++ + ++ +LG +E + T + + P+ I+ GY Y A Q
Sbjct: 163 LFMWGDNSEGQLG-------LEKGTIYCTPQKVDTGKPIAWISCGY-YHSAFVTQDG--E 212
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
+Y+ G GKLG +KH + ++ L+ + +V+ G H V + V T+G
Sbjct: 213 LYTFGEPENGKLGLPPDKIKKHKK-PQRVLGLSGKVTMVSCGGEHTIAVTEK-EVYTFGL 270
Query: 388 GRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G++G LGHG E+ +PK V AL K +V G+ T +++E G +Y+FG G LG
Sbjct: 271 GQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLG 330
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 131/255 (51%), Gaps = 20/255 (7%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGAGR 208
A G H++ T +G +YS G NS GQLG G T + I +I Q +AG+
Sbjct: 94 AACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNM 153
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G+++ +G +S E + G++ + +PQ V++ K I + + G + +A +++
Sbjct: 154 SAALTVDGKLFMWGDNS--EGQLGLEKGTIYCTPQKVDTGKPIAWI--SCGYYHSAFVTQ 209
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHP----LLGTLENIPVVQIAAGYCYLLALACQPS 324
+G +YTF + +LG P+ ++ H +LG + V ++ G + +A+ +
Sbjct: 210 DGELYTFGEPENGKLG--LPPDKIKKHKKPQRVLGL--SGKVTMVSCGGEHTIAVTEK-- 263
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
VY+ G G G+LGHG+ E H P+ ++ ++ V G H A++ + G +
Sbjct: 264 --EVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIR--YVTCGENHTAIITEKGLLY 319
Query: 384 TWGWGRYGCLGHGNE 398
T+G GR+G LG G E
Sbjct: 320 TFGDGRHGKLGLGEE 334
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 27/323 (8%)
Query: 194 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 253
L+ + + + G T+L++ G++Y FG +++G+ GV+ ++ P V++LK+ V
Sbjct: 34 LKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQ--LGVEAGSAISKPTCVKALKSEKV 91
Query: 254 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 313
V AA G T V + +G++Y+ ++ +LG + + Q++AG
Sbjct: 92 VLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGS 151
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWH 372
AL ++ G G+LG T P+ ++ +P+ ++ G +H
Sbjct: 152 NMSAALTVDG---KLFMWGDNSEGQLGLEKGTIYCTPQKVD-----TGKPIAWISCGYYH 203
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFVVSED 431
+A V QDG + T+G G LG ++ + K + L K V+ G T V+E
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGEHTIAVTEK 263
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
+VY+FG G+ LGH G P+ V +L + R V H
Sbjct: 264 -EVYTFGLGQFGQLGH-------GTFIFETHIPKAVDALTKKKIRYVTCG-------ENH 308
Query: 492 TFALTESGKLYAFGAGDKGQLGI 514
T +TE G LY FG G G+LG+
Sbjct: 309 TAIITEKGLLYTFGDGRHGKLGL 331
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F L N +P ++ G H +V +G++ +G +G LG S P V+AL K
Sbjct: 31 KFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEK 90
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ A G + T V +E G +YS G LG + D G TS ++++
Sbjct: 91 VVLAACGRHHTLVYTEQGKLYSSGGNSEGQLG---LGDTAGR-----------TSFQEIS 136
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 515
Q + + + ALT GKL+ +G +GQLG+E
Sbjct: 137 FFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLE 177
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 11/229 (4%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q AG S A+T G ++ +G NS GQLG P+ + + G I + G
Sbjct: 146 QLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKVDT--GKPIAWISCGYYH 203
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ ++ G++Y FG+ G+ K PQ V L + + G AV +
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGEHTIAVTEK 263
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
E VYTF G +LGH T + + L + + G + + G+ +
Sbjct: 264 E--VYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIIT--EKGL-L 318
Query: 329 YSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 375
Y+ G G GKLG G T++ P L F +Q VA G H V
Sbjct: 319 YTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQS--VACGGCHMLV 365
>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
Length = 402
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 32/273 (11%)
Query: 186 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
W P L G+R+ +G A ++LI+ G+++++G++ G+ +G TK V +P+
Sbjct: 135 WGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPR 192
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
LVE L + +V AA G T L+ G V+ F +LG + D P P
Sbjct: 193 LVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNG 251
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------EKHPR 351
P+ ++A G + + + C+ + +YS GC G+LGH S E PR
Sbjct: 252 QPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 308
Query: 352 LIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
+ F Q+L + VVV A GA H V+ RV +WG+G YG LGH ++ E
Sbjct: 309 RVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDE 368
Query: 402 SVPKVVQALN--DVKAIHVATGDYTTFVVSEDG 432
VP++V+ + A + G +F VSE G
Sbjct: 369 MVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVG 401
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 57/302 (18%)
Query: 109 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 154
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 83 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142
Query: 155 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
HS+ +T++G ++S+G N GQLGHG T+ PR + L I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 260
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 297
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 261 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 320
Query: 298 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 321 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377
Query: 357 QL 358
Sbjct: 378 DF 379
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRL+
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 194
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 205 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 323 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 380
Query: 306 ---VVQIAAGYCYLLALA 320
QI AGY A++
Sbjct: 381 GRGASQIYAGYTCSFAVS 398
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 220
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 452
A G T V+ V+S+G G LGH D
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 367
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH V P+LV L +E +V + + HT ALTE+G ++AF
Sbjct: 180 LGHGDTK--------RVEAPRLVEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 224
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239
>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
magnipapillata]
Length = 1020
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 21/316 (6%)
Query: 152 AGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGA 206
AG H VT + +Y++ G+ GQL HG P+ + GI I QA G
Sbjct: 490 AGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGE 549
Query: 207 GRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T++++++G VY+ G D +G G+ G+ ++T P +++L + VV A G+
Sbjct: 550 DFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLT-PIKIDALSKLKVVSIACGDCHVVA 608
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPS 324
L+ G VYT+ G RLG + ND L+ E +V+I G L
Sbjct: 609 LTNIGSVYTWGNGEHGRLGLGNQ-NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGH 667
Query: 325 GMAVYSVGC---GLGGKLGHGSRTDEKHPRLIEQFQLL--------NLQPVVVAAGAWHA 373
+A + C L + TD+ + + L + + V +A+G H+
Sbjct: 668 LLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHS 727
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT-GDYTTFVVSEDG 432
AVV + GR+ T+G +G LG G+ + + P +V L + K + + GD T V + D
Sbjct: 728 AVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTVVATADN 787
Query: 433 DVYSFGCGESASLGHN 448
++S+GCGE+ LG N
Sbjct: 788 QIFSWGCGENGRLGLN 803
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 52/357 (14%)
Query: 200 IQAAAGAGRTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
I+ +AG +++ ++Y + G + G+ +G + + +P+ V+ I +
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRA--MYRTPKRVDFFTGIPIK 543
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDAR--LG-HHTEPNDVEPHPLLGTLENIPVVQIAA 311
QA G FT +L+ G VY S G+D LG ++V + L + VV IA
Sbjct: 544 QAVCGEDFTIILTESGDVY--SCGSDYYGCLGCEGIYGSNVLTPIKIDALSKLKVVSIAC 601
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI---EQFQLLNLQPVVVAA 368
G C+++AL S VY+ G G G+LG G++ D P+L+ E++ + V +
Sbjct: 602 GDCHVVALTNIGS---VYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYI----VKITC 654
Query: 369 GAWHAAVVGQDGRVCTWGWGRYGCLG-------HGNEECES---------VPKVVQALND 412
G + ++ +G + +G L GN + S +P V+ L
Sbjct: 655 GRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRS 714
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ + +A+G + VV E G + +FG S + G + D Q P LV+ L
Sbjct: 715 YRIVSMASGKSHSAVVDEFGRLLTFG---SNTFGELGLGDYQSRNF-----PSLVSGL-- 764
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
+N + V I + T T +++++G G+ G+LG+ L N T+ +P+ +
Sbjct: 765 LNGKEVTICNCGDNF----TVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPI 817
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
+ V+AG H AVV + + TW G G L HGN PK V +
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQA 545
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
G+ T +++E GDVYS G LG +G +NVLTP + +L ++ +VV
Sbjct: 546 VCGEDFTIILTESGDVYSCGSDYYGCLG------CEGIYGSNVLTPIKIDALSKL--KVV 597
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 531
I+ + H ALT G +Y +G G+ G+LG+ NQ + P+ V +
Sbjct: 598 SIACG-----DCHVVALTNIGSVYTWGNGEHGRLGL---GNQNDFNLPQLVTL 642
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLG-------HGTTEEEWR---------PRPIRSLQG 196
G ++ +TS G + +FG+N +L G T++ P P+R L+
Sbjct: 655 GRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRS 714
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQ 255
RI+ A+G + ++ + G++ FG ++FGE G ++ P LV L N V
Sbjct: 715 YRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSR--NFPSLVSGLLNGKEVTI 772
Query: 256 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PHPLLGTLENIPVVQIAA 311
G+ FT V + + +++++ G + RLG + + P P+ G+L VV +AA
Sbjct: 773 CNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIFGSLH--KVVSMAA 829
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 255
G++I AAG T+++SD GQV+ +G G+ G + ++V+SP ++ + + +VQ
Sbjct: 10 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQ 68
Query: 256 A-------------------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 296
A G +AV++ G V F WG + G + +++ P
Sbjct: 69 GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSP-T 127
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ +L I + +AAG L C + VY+ G G+LG GS E PRL++
Sbjct: 128 CVSSLLGIQIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCP 184
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
L N+ ++ GA H A+V +G+V +WGW +YG LG G+ ++P V A+ A
Sbjct: 185 SLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAK 243
Query: 417 HVATGDYTTFVVSE 430
+VA G + T +++E
Sbjct: 244 NVACGWWHTLLLAE 257
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 149 QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+AIA G HS +T G V +FG GQ G G+T++E P + SL GI+I AAG
Sbjct: 86 KAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAGLW 145
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAV 265
T+ S G VYAFG + FG + G + T P+L++ SL+N+ V + G TA+
Sbjct: 146 HTVCTSADGDVYAFGGNQFG--QLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTAL 203
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ G+V+++ W +LG + P + +E +A G+ + L LA P+
Sbjct: 204 VTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV--AIEGCIAKNVACGWWHTLLLAESPT 260
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 58/293 (19%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 301
P LV + + A G T VLS G+V+ + +G + +LG + V ++ +
Sbjct: 2 PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61
Query: 302 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
++ +VQ GS + E H F++
Sbjct: 62 DSSSLVQ---------------------------------GSMSSEGH-----NFRIPGS 83
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
+A G H+AV+ G V +GWG YG G G+ + E P V +L ++ VA G
Sbjct: 84 CIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAG 143
Query: 422 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT--SLKQVNERVVQ 479
+ T S DGDVY+FG + L G G+ A L P+L+ SL+ VN + +
Sbjct: 144 LWHTVCTSADGDVYAFGGNQFGQL-------GTGSDQAETL-PRLLDCPSLENVNVKTIS 195
Query: 480 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
HT +T++GK++++G GQLG+ + +R P V I+
Sbjct: 196 CGAR-------HTALVTDNGKVFSWGWNKYGQLGL---GDVIDRNIPSEVAIE 238
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS------------LQG--- 196
AG H++ ++ G V+ +G GQLG G+ R R + S +QG
Sbjct: 18 AGGRHTLVLSDIGQVWGWGYGGEGQLGLGS-----RVRMVSSPHIIPCIDSSSLVQGSMS 72
Query: 197 -----IRI----IQAAAGAGR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 246
RI I+A A GR + +I+DAG V AFG +G+ G +L SP V
Sbjct: 73 SEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDEL--SPTCVS 130
Query: 247 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 305
SL I + A G + T S +G VY F +LG ++ + P L +LEN+
Sbjct: 131 SLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVN 190
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 365
V I+ G + A V+S G G+LG G D P + +
Sbjct: 191 VKTISCGARH---TALVTDNGKVFSWGWNKYGQLGLGDVIDRNIP---SEVAIEGCIAKN 244
Query: 366 VAAGAWHAAVVGQ 378
VA G WH ++ +
Sbjct: 245 VACGWWHTLLLAE 257
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G ++++G N GQLG G T P+ + L G+ + Q +AG
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M +S +G +Y++GK+ FG+ G+ T+ SP L+E+L N V A G +A+L+
Sbjct: 201 HSMALSMSGNIYSWGKNEFGQL--GLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFG--K 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
V+S G G G+LG+G D+ P
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIP 338
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 26/269 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ I+ + ++I GA +++S G+ + E +Y + K + S +++
Sbjct: 88 PKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQE 136
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENI 304
K ++Q G++ + LS+ G + F+WG + +LG T P+ P ++ L +
Sbjct: 137 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRTFPSTTTPQ-IVEHLAGV 190
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
P+ QI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 191 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVE 245
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 305
Query: 425 TFV-VSEDGDVYSFGCGESASLGHNAIAD 452
T VS+ G V+SFG G+ LG+ D
Sbjct: 306 TLAYVSDFGKVFSFGSGKDGQLGNGGTLD 334
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 37/276 (13%)
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+P+ ++ KN+ + G +LS +G+ + + D + H +
Sbjct: 87 TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSES---------I 133
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQL 358
L+ ++QI G + LAL+ G +++ G L G+LG G RT P+++E L
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVG-RTFPSTTTPQIVEH--L 187
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
+ ++AG H+ + G + +WG +G LG G+ E + P +++AL++ K +
Sbjct: 188 AGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFL 247
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G + ++++DG +++FG G+ LGHN+ N L P LV L V RV
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGNRVT 297
Query: 479 QISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 513
QI+ W HT A +++ GK+++FG+G GQLG
Sbjct: 298 QIACGR---W--HTLAYVSDFGKVFSFGSGKDGQLG 328
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 183 EEEWRPRPIRS---LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
E ++ + +RS LQ +IIQ G ++ +S G+++A+G++ G+ G +
Sbjct: 120 EYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RTFPST 178
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHP 296
T+PQ+VE L + + Q + G + LS G +Y SWG + +LG HTE D
Sbjct: 179 TTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKD--SPS 234
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L+ L+N V +A G + AL Q G+ +++ G G G+LGH S +E P L+ +
Sbjct: 235 LIEALDNQKVEFLACGGSHS-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE- 290
Query: 357 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
L+ + +A G WH A V G+V ++G G+ G LG+G + +P V+
Sbjct: 291 -LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS+A++ G +YS+G N GQLG G TE + P I +L ++ A G
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
+ L++ G ++ FG G+ G T+ P LV L V Q A G + T A +
Sbjct: 253 HSALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
S G+V++F G D +LG+ + + P P+
Sbjct: 311 SDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 211
G HS +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 250 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAY 309
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
+SD G+V++FG G+ G +L+ P V S
Sbjct: 310 VSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSS 345
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 422
+ + G +H+ + + G + WG +G LG G + P++V+ L V ++ G+
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199
Query: 423 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
+ +S G++YS+G E LGH D +P L+ +L N++V +
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD----------SPSLIEALD--NQKVEFL 247
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+ S H+ LT+ G L+ FGAG GQLG N+
Sbjct: 248 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 282
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 319 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ C P +AV G G G ++ G+RT P+ I+ + N++ V GA H
Sbjct: 56 ICCSPRRLAVLERG-GAGVQVHQVLAGSGGART----PKCIKLGK--NMKIHSVDQGADH 108
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
++ DG+ + + + H E L + K I + GDY + +S+ G
Sbjct: 109 MLILSSDGKPFEYDYS----MKHLRSE--------SILQEKKIIQITCGDYHSLALSKGG 156
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+++++G LG G + TPQ+V L V + QIS AH+
Sbjct: 157 ELFAWGQNLHGQLG-------VGRTFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 202
Query: 493 FALTESGKLYAFGAGDKGQLGI 514
AL+ SG +Y++G + GQLG+
Sbjct: 203 MALSMSGNIYSWGKNEFGQLGL 224
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS+A++ G ++++G N GQLG G T P+ + L G+ + Q +AG
Sbjct: 141 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M +S +G +Y++GK+ FG+ G+ T+ SP L+E+L N V A G +A+L+
Sbjct: 201 HSMALSMSGNIYSWGKNEFGQL--GLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
++G ++TF G +LGH++ N++ P L+ L V QIA G + LA
Sbjct: 259 QDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFG--K 315
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
V+S G G G+LG+G D+ P
Sbjct: 316 VFSFGSGKDGQLGNGGTLDQLIP 338
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 26/269 (9%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ I+ + ++I GA +++S G+ + E +Y + K + S +++
Sbjct: 88 PKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQE 136
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENI 304
K ++Q G++ + LS+ G + F+WG + +LG T P+ P ++ L +
Sbjct: 137 KK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRTFPSTTTPQ-IVEHLAGV 190
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 364
P+ QI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 191 PLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVE 245
Query: 365 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 424
+A G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 305
Query: 425 TFV-VSEDGDVYSFGCGESASLGHNAIAD 452
T VS+ G V+SFG G+ LG+ D
Sbjct: 306 TLAYVSDFGKVFSFGSGKDGQLGNGGTLD 334
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 37/276 (13%)
Query: 241 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 300
+P+ ++ KN+ + G +LS +G+ + + D + H +
Sbjct: 87 TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSES---------I 133
Query: 301 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQL 358
L+ ++QI G + LAL+ G +++ G L G+LG G RT P+++E L
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVG-RTFPSTTTPQIVEH--L 187
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
+ ++AG H+ + G + +WG +G LG G+ E + P +++AL++ K +
Sbjct: 188 AGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFL 247
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G + ++++DG +++FG G+ LGHN+ N L P LV L V RV
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGNRVT 297
Query: 479 QISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 513
QI+ W HT A +++ GK+++FG+G GQLG
Sbjct: 298 QIACGR---W--HTLAYVSDFGKVFSFGSGKDGQLG 328
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 183 EEEWRPRPIRS---LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 239
E ++ + +RS LQ +IIQ G ++ +S G+++A+G++ G+ G +
Sbjct: 120 EYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RTFPST 178
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHP 296
T+PQ+VE L + + Q + G + LS G +Y SWG + +LG HTE D
Sbjct: 179 TTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKD--SPS 234
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
L+ L+N V +A G + AL Q G+ +++ G G G+LGH S +E P L+ +
Sbjct: 235 LIEALDNQKVEFLACGGSHS-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE- 290
Query: 357 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 409
L+ + +A G WH A V G+V ++G G+ G LG+G + +P V+
Sbjct: 291 -LVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS+A++ G +YS+G N GQLG G TE + P I +L ++ A G
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGS 252
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
+ L++ G ++ FG G+ G T+ P LV L V Q A G + T A +
Sbjct: 253 HSALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV 310
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 297
S G+V++F G D +LG+ + + P P+
Sbjct: 311 SDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTM-L 211
G HS +T G++++FG+ GQLGH +T+ E RP + L G R+ Q A G T+
Sbjct: 250 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAY 309
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
+SD G+V++FG G+ G +L+ P V S
Sbjct: 310 VSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSS 345
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 422
+ + G +H+ + + G + WG +G LG G + P++V+ L V ++ G+
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199
Query: 423 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 480
+ +S G++YS+G E LGH D +P L+ +L N++V +
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD----------SPSLIEALD--NQKVEFL 247
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
+ S H+ LT+ G L+ FGAG GQLG N+
Sbjct: 248 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 282
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 319 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ C P +AV G G G ++ G+RT P+ I+ + N++ V GA H
Sbjct: 56 ICCSPRRLAVLERG-GAGVQVHQVLAGSGGART----PKCIKLGK--NMKIHSVDQGADH 108
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
++ DG+ + + + H E L + K I + GDY + +S+ G
Sbjct: 109 MLILSSDGKPFEYDYS----MKHLRSE--------SILQEKKIIQITCGDYHSLALSKGG 156
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 492
+++++G LG G + TPQ+V L V + QIS AH+
Sbjct: 157 ELFAWGQNLHGQLG-------VGRTFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 202
Query: 493 FALTESGKLYAFGAGDKGQLGI 514
AL+ SG +Y++G + GQLG+
Sbjct: 203 MALSMSGNIYSWGKNEFGQLGL 224
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 160/369 (43%), Gaps = 59/369 (15%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T +G ++S+G N GQLGHG + P+ I SL+G + AA G T+ +++
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G VYAFG++ G+ G + + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI--TKVACGAEFSMIMDCKGNLYSF 269
Query: 276 SWGNDARLGHH-----------------------------TEPNDVEPHPLLGTLENIPV 306
+LGH+ T+ + P P N+ V
Sbjct: 270 GCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVP------NVVV 323
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
IA G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 324 RDIACGINHSLILDSQKR---VFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQI 380
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
AGA + V + G + WG + + + PK VQ L K +A G ++
Sbjct: 381 YAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSI 433
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+V+ D S+ G S + G D N+ + T Q V +L + V I
Sbjct: 434 IVAADESTISW--GPSPTFGELGYGD---NKAKSSTTAQEVKTLDGIYSDQV-------I 481
Query: 487 YWNAHTFAL 495
N+HT +
Sbjct: 482 MGNSHTLVV 490
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 186 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
W P L G+++ A+G A ++LI+ G+++++G++ G+ +G K + P+
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG--DIKRIDVPK 185
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
L+ESLK V AA G T L+ G VY F +LG + D P P
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 349
P+ ++A G + + + C+ + +YS GC G+LGH S D K+
Sbjct: 245 QPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNS--DGKYIARAQRIEYDCELI 299
Query: 350 PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
R I F Q+L + VVV A G H+ ++ RV +WG+G YG LGH +
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQR 359
Query: 400 CESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 438
E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 360 DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 46/313 (14%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 207
A G H++A+T G VY+FG N GQLG G + P P + L G I + A GA
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAE 255
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDG-KYIARAQRIEYDCELIARRIAIFIEKTKDGQ 314
Query: 247 --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
+ N+ V A G + +L + RV+++ +G RLGH + +++ P L L +
Sbjct: 315 ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR--LVKLFDF 372
Query: 305 P---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
P QI AG A++ + G+ + + SR +P+ ++ L
Sbjct: 373 PGRGAAQIYAGATCSFAVS-EMGGLFFWGA--------TNTSRDSTMYPKAVQ--DLCGW 421
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHV 418
+ +A G + +V D +WG +G LG+G+ + +S + V+ L+ + + V
Sbjct: 422 KVRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQV 480
Query: 419 ATGDYTTFVVSED 431
G+ T VV+ D
Sbjct: 481 IMGNSHTLVVARD 493
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V +A+G C +L G ++S G G+LGHG P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E + V A G H + ++G V +G + G LG GN+ ++VP Q L +
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 414 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 468
+ I VA G + ++ G++YSFGC E LGHN+ IA Q + L + +
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 469 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + H+ L +++++G G G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ + +LGH + ++ L+ +L+ V A G + LAL S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
VY+ G G+LG G++TD P I L N QP+ VA GA + ++ G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE + + + + +V +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G + ++ V+S+G G LGH+ D + P+LV
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 442
WG RYGCL V+ VA+G + +++ +G ++S+G +
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH I + P+L+ SLK E V + + HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215
Query: 503 AFGAGDKGQLGI 514
AFG GQLG+
Sbjct: 216 AFGENKMGQLGL 227
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + + P+ ++ L G ++ A
Sbjct: 375 RGAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPKAVQDLCGWKVRSLAC 428
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L I+ Q +GN T
Sbjct: 429 GKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTL 488
Query: 265 VLSRE 269
V++R+
Sbjct: 489 VVARD 493
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 177/384 (46%), Gaps = 54/384 (14%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
QA G HS+ + + G V+S G+NS GQLG ++ RP PI++L+ ++ + G
Sbjct: 41 QAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEH 100
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLS 267
++ I G++Y++G S G + G++ K S P+ + +L ++Q + G++ + L+
Sbjct: 101 SLAICKTGRIYSWGSGSRG--QLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALT 158
Query: 268 REGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++G+V FSWG++ +LG T P+ P + +L+ IP+ Q+AAG + AL+ S
Sbjct: 159 QDGKV--FSWGDNDHGQLGLGTNFPSQASPQR-VNSLDGIPLAQVAAGGSHSFALSL--S 213
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-----------------KHPRLIEQFQ----LLNLQP 363
G + Y G G+L + K I++FQ LLN
Sbjct: 214 GTS-YGWGRNKEGQLALSGKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSR 272
Query: 364 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 423
+ DG+V T+G G LGHG P++V++ I A G +
Sbjct: 273 QIA------------DGKVLTFGSNNSGQLGHGLITKPRGPQIVESAELFSQI--ACGSH 318
Query: 424 TTFVVS-EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI-S 481
T + G V SFGCG L ++ QG+ N L++S RV I +
Sbjct: 319 HTLAYACTSGQVLSFGCGSQRHLTNSL---QQGSLEQNFNISNLISSNDFTGVRVKDIFA 375
Query: 482 LTNSIYWNAHTFALTESGKLYAFG 505
NS + T L ++ LYA G
Sbjct: 376 GANSNF--VTTIQLEDASSLYATG 397
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 155/368 (42%), Gaps = 47/368 (12%)
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIR-----SLQGIRIIQAAAGAGRTMLISDAGQVY 219
+ Y +G NS QLG PR +R SL G +I+QAA G ++L+ G V+
Sbjct: 1 MYYCWGDNSFRQLGINAGRRA-SPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVW 59
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+ G +S+G + G + K P +++L+ VV + G + + + GR+Y++ G+
Sbjct: 60 SCGNNSYG--QLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGS 117
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 339
+LG + + L ++Q++ G+ + +AL V+S G G+L
Sbjct: 118 RGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALT---QDGKVFSWGDNDHGQL 174
Query: 340 GHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG----CLG 394
G G+ + P+ + + L VAAG H+ + G ++GWGR L
Sbjct: 175 GLGTNFPSQASPQRVNSLDGIPL--AQVAAGGSHSFALSLSG--TSYGWGRNKEGQLALS 230
Query: 395 HGNEECESVPKVV----QAL-----NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
N S+ + +AL N +K DG V +FG S L
Sbjct: 231 GKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQL 290
Query: 446 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAF 504
GH I +G PQ+V S E QI+ + HT A SG++ +F
Sbjct: 291 GHGLITKPRG--------PQIVESA----ELFSQIACGSH-----HTLAYACTSGQVLSF 333
Query: 505 GAGDKGQL 512
G G + L
Sbjct: 334 GCGSQRHL 341
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G R + R E L Q V A G H+ ++ DG V + G YG LG N +
Sbjct: 18 GRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKS 77
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P +QAL + V+ G + + + G +YS+G G LG + D
Sbjct: 78 KRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKD-------QC 130
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 521
P+ + +L + ++++Q+S + H+ ALT+ GK++++G D GQLG L N
Sbjct: 131 SIPKNIAALSR--DKIIQVSCG-----HYHSIALTQDGKVFSWGDNDHGQLG--LGTNFP 181
Query: 522 ERGNPERVD 530
+ +P+RV+
Sbjct: 182 SQASPQRVN 190
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 141 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRI 199
A R + Q G HSIA+T G V+S+G N GQLG GT + P+ + SL GI +
Sbjct: 138 ALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIPL 197
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA--A 257
Q AAG + +S +G Y +G++ G+ + +V+ + + +
Sbjct: 198 AQVAAGGSHSFALSLSGTSYGWGRNKEGQLALSGKNASVVSINYCIWHEAEALTCKRSNS 257
Query: 258 IGNF--FTAVLSR-----EGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIP 305
I F +L+R +G+V TF N +LGH P VE L
Sbjct: 258 IKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLGHGLITKPRGPQIVESAELFS------ 311
Query: 306 VVQIAAGYCYLLALACQPSGMAVYSVGCG 334
QIA G + LA AC + V S GCG
Sbjct: 312 --QIACGSHHTLAYAC--TSGQVLSFGCG 336
>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
Length = 427
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTET 125
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 183
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKTVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 433 DVYSFG 438
S+G
Sbjct: 354 STISWG 359
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 170
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIR 338
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ V VA
Sbjct: 339 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVA 395
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 44 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHETIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGS 127
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKTVQDLCGWRIRSLAC 342
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L +F Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSL 402
Query: 265 VLSRE 269
V++R+
Sbjct: 403 VIARD 407
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 42 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 87 LGH-----GDTKR---VEAPRLIEGLS--HETIVSAACGRN-----HTLALTETGSVFAF 131
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 29/362 (8%)
Query: 105 QKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKG 164
Q++ I KP+ ++ G W L L + + C R+ +I T
Sbjct: 53 QRQRICKPVIACTKRSTDMVDFGKWPL-FALLSSQDLSCIRQACVFGCSANEAIYTTQNN 111
Query: 165 VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGK 223
V+ FG N S LG G + PR + L G +I+ + G+G +L ++ G+VY++G
Sbjct: 112 EVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGH 171
Query: 224 DSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 281
+ + + G +QGT T Q+ L + V+Q A G+ + L+ +G V+++ + N
Sbjct: 172 NGYSQLGNGNTIQGT---TPVQVCMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCG 228
Query: 282 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 341
++G T N P + +L++ VV I+AG +AL VY G G+LG
Sbjct: 229 QVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALT---DNGHVYGWGYNGTGQLGL 285
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
G+ ++ P +L+ QP+ V G H + G + WG +G LG GN+
Sbjct: 286 GNTGNQLMP-----CRLVFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNK 340
Query: 399 ECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGDVYSFG-----CGESASLGHNAI 450
++VP V + + +V A H + S+ G VY +G C S L H
Sbjct: 341 SNQTVPVKVGTNERMVEVTACHSTN---ISAAKSQSGQVYMWGLCRGQCLLSPHLTHFTC 397
Query: 451 AD 452
D
Sbjct: 398 TD 399
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 12/205 (5%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLQGIRIIQAAAGAG 207
Q G HS+A+TS G V+S+G N+ GQ+G GTT + PR + SLQ ++ +AG
Sbjct: 202 QVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQT 261
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+M ++D G VY +G + G+ G G +L+ P + + I ++Q +G T LS
Sbjct: 262 SSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM--PCRLVFAQPICIIQVVLGYAHTLALS 319
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+G +Y + + +LG + N P +GT E + V++ A + ++ A SG
Sbjct: 320 DQGVLYAWGANSHGQLGIGNKSNQTVPVK-VGTNERM--VEVTACHSTNISAAKSQSGQ- 375
Query: 328 VYSVG-----CGLGGKLGHGSRTDE 347
VY G C L L H + TD+
Sbjct: 376 VYMWGLCRGQCLLSPHLTHFTCTDD 400
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 319 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
L C G VYS G +LG+G+ P + +LL+ + + VA G+ H+ +
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTPVQV-CMELLSKKVIQVACGSHHSMALTS 215
Query: 379 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
DG V +WG+ G +G G +SVP KV +L + ++ G ++ ++++G VY +
Sbjct: 216 DGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTSSMALTDNGHVYGW 275
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G + L G GN ++ +LV + I + + AHT AL++
Sbjct: 276 GYNGTGQL-------GLGNTGNQLMPCRLVFAQP--------ICIIQVVLGYAHTLALSD 320
Query: 498 SGKLYAFGAGDKGQLGIELVNNQT---ERGNPERV 529
G LYA+GA GQLGI +NQT + G ER+
Sbjct: 321 QGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNERM 355
>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 444
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 155/336 (46%), Gaps = 39/336 (11%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG GH +A+ G V+++GSN GQLG GT + P + L G++ I AAG ++
Sbjct: 78 AGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAGPVQVAGLTGVKAI--AAGKDISLA 135
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
+ G V+A+G +S+G+ G K P V+ L NI + A + L+ +G
Sbjct: 136 LKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISAG----GSHCLASQGD 191
Query: 272 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 329
++WG++ LG T N+ P+ + N V+ + AG + LA+ + V+
Sbjct: 192 GAVWAWGDNRHGVLGDGT--NESRFTPVRSKIYN--VMGLDAGDAHALAVMVDGN---VW 244
Query: 330 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVVGQDG 380
S G G+LG G + RL + + P + VA GA H+ + +G
Sbjct: 245 SWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGASHSVALADNG 304
Query: 381 RVCTWGWGRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 438
V TWG G LG G +VP V +N + A+ G Y T + +DG V+++G
Sbjct: 305 TVWTWGSNSDGQLGVGKTGGSDMTVPVRVSGINGITAVD--AGLYHTLALKDDGSVWAWG 362
Query: 439 CGESASLGHNAIADGQ-GNRHANVLTPQLVTSLKQV 473
A+GQ GNR A+ +P LV Q+
Sbjct: 363 SN----------AEGQVGNRSASAGSPALVLMQTQI 388
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 164/389 (42%), Gaps = 63/389 (16%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAG 216
S+A+ G V+ +G S G E P+ + + +R I AAG G + + G
Sbjct: 41 SVALLDDGTVWQWGYVSDG-------VEYATPQKVE-ISVVRKI--AAGYGHVLALKGDG 90
Query: 217 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 276
V+A+G + +G+ G P V L + + A G + L +G V+ +
Sbjct: 91 TVWAWGSNKYGQLGDGTYNDS--AGPVQVAGLTGVKAIAA--GKDISLALKGDGTVW--A 144
Query: 277 WGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 333
WG+++ ++G + P+ + L NI + +C LA Q G AV++ G
Sbjct: 145 WGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISAGGSHC----LASQGDG-AVWAWGD 199
Query: 334 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 393
G LG G+ P + + ++ L AG HA V DG V +WG+ G L
Sbjct: 200 NRHGVLGDGTNESRFTPVRSKIYNVMGLD-----AGDAHALAVMVDGNVWSWGYNYNGQL 254
Query: 394 GHGNEECESV-------------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
G G + P +V+ L+ VK+ VA G + ++++G V+++G
Sbjct: 255 GMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKS--VAVGASHSVALADNGTVWTWGSN 312
Query: 441 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 500
LG +++ P V+ + + ++ +Y HT AL + G
Sbjct: 313 SDGQLGVGKTGG------SDMTVPVRVSGINGIT------AVDAGLY---HTLALKDDGS 357
Query: 501 LYAFGAGDKGQLGIELVNNQTERGNPERV 529
++A+G+ +GQ+G N G+P V
Sbjct: 358 VWAWGSNAEGQVG----NRSASAGSPALV 382
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 160/369 (43%), Gaps = 59/369 (15%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T +G ++S+G N GQLGHG + P+ I SL+G + AA G T+ +++
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G VYAFG++ G+ G + + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 212 GSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPI--TKVACGAEFSMIMDCKGNLYSF 269
Query: 276 SWGNDARLGHH-----------------------------TEPNDVEPHPLLGTLENIPV 306
+LGH+ T+ + P P N+ V
Sbjct: 270 GCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVP------NVVV 323
Query: 307 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 366
IA G + L L Q V+S G G G+LGH + DE PRL++ F +
Sbjct: 324 RDIACGINHSLILDSQKR---VFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQI 380
Query: 367 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 426
AGA + V + G + WG + + + PK VQ L K +A G ++
Sbjct: 381 YAGATCSFAVSEMGGLFFWG------ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSI 433
Query: 427 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
+V+ D S+ G S + G D N+ + T Q V +L I +I
Sbjct: 434 IVAADESTISW--GPSPTFGELGYGD---NKAKSSTTAQEVKTLD-------GIYSDQAI 481
Query: 487 YWNAHTFAL 495
N+HT +
Sbjct: 482 MGNSHTLVV 490
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 36/281 (12%)
Query: 186 WRPRPIRSLQGIRIIQAAAG--AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 243
W P L G+++ A+G A ++LI+ G+++++G++ G+ +G K + P+
Sbjct: 128 WGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHG--DIKRIDVPK 185
Query: 244 LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 303
L+ESLK V AA G T L+ G VY F +LG + D P P
Sbjct: 186 LIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------- 349
P+ ++A G + + + C+ + +YS GC G+LGH S D K+
Sbjct: 245 QPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHNS--DGKYIARAQRIEYDCELI 299
Query: 350 PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 399
R I F Q+L + VVV A G H+ ++ RV +WG+G YG LGH +
Sbjct: 300 ARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQR 359
Query: 400 CESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 438
E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 360 DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 46/313 (14%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAG 207
A G H++A+T G VY+FG N GQLG G + P P + L G I + A GA
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA-VPSPAQILYNGQPITKVACGAE 255
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDG-KYIARAQRIEYDCELIARRIAIFIEKTKDGQ 314
Query: 247 --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 304
+ N+ V A G + +L + RV+++ +G RLGH + +++ P L L +
Sbjct: 315 ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPR--LVKLFDF 372
Query: 305 P---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 361
P QI AG A++ + G+ + + SR +P+ ++ L
Sbjct: 373 PGRGAAQIYAGATCSFAVS-EMGGLFFWGA--------TNTSRDSTMYPKAVQ--DLCGW 421
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHV 418
+ +A G + +V D +WG +G LG+G+ + +S + V+ L+ + +
Sbjct: 422 KVRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQA 480
Query: 419 ATGDYTTFVVSED 431
G+ T VV+ D
Sbjct: 481 IMGNSHTLVVARD 493
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V +A+G C +L G ++S G G+LGHG P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 413
E + V A G H + ++G V +G + G LG GN+ ++VP Q L +
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 414 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 468
+ I VA G + ++ G++YSFGC E LGHN+ IA Q + L + +
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 469 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + H+ L +++++G G G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ + +LGH + ++ L+ +L+ V A G + LAL S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
VY+ G G+LG G++TD P I L N QP+ VA GA + ++ G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE + + + + +V +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G + ++ V+S+G G LGH+ D + P+LV
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 442
WG RYGCL V+ VA+G + +++ +G ++S+G +
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170
Query: 443 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
LGH I + P+L+ SLK E V + + HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215
Query: 503 AFGAGDKGQLGI 514
AFG GQLG+
Sbjct: 216 AFGENKMGQLGL 227
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
+LV F G R +Q AG S AV+ G ++ +G+ ++ + + P+
Sbjct: 365 RLVKLFDFPG-----RGAAQIYAGATCSFAVSEMGGLFFWGATNT------SRDSTMYPK 413
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
++ L G ++ A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 414 AVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLD 473
Query: 250 NIFVVQAAIGNFFTAVLSRE 269
I+ QA +GN T V++R+
Sbjct: 474 GIYSDQAIMGNSHTLVVARD 493
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 166/412 (40%), Gaps = 38/412 (9%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP----RPIRSLQGIRIIQAA 203
SQ +G HS+A+ S G +Y++G NSSGQ+G +T P +P + A
Sbjct: 207 SQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNKPANASDQFTFTTIA 266
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNF 261
AG ++ I G +YA+G ++ G+ G KL V P+ Q +
Sbjct: 267 AGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFTWTQVSARWD 326
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP--------LLGTLENIPVVQIAAGY 313
T L +Y + W +LG+ + P + +P L+ T + Q++AG
Sbjct: 327 HTLALGSNHNLYAWGWNGYGQLGNTSVPTGSD-NPAAYSSKPVLVSTPAGVTFTQLSAGR 385
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ LAL S +Y+ G G+LG G+ P + Q + +AG
Sbjct: 386 YHSLALG---SDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPAGVTFS--QFSAGDTSC 440
Query: 374 AVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA----IHVATGDYTTFVV 428
+ +G + WGW YG LG G N E P ++ + A V D +
Sbjct: 441 FAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLAI 500
Query: 429 SEDGDVYSFGCGESASLGHNAI-ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
DG++YS+G E LG I DG + + P +V + + N+ +
Sbjct: 501 GSDGNLYSWGLNEYGQLGIKDINTDG-----SYISRPHIVDQSTSSTAQKFTWTQINAGW 555
Query: 488 WNAHTFALTESGKLYAFGAGDKGQLGIELV-----NNQTERGNPERVDIDLS 534
+ AL G LY +G + GQLG V N+Q R P LS
Sbjct: 556 --RESSALGSDGNLYTWGWNNGGQLGDPTVPIGTDNSQAMRLTPSLAAFPLS 605
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 34/340 (10%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---- 250
+GI+ Q +GA ++ + G +YA+G +S G+ G T L +P N
Sbjct: 202 RGIKFSQITSGATHSLALGSDGSLYAWGDNSSGQV--GDNSTTLRQTPVKTNKPANASDQ 259
Query: 251 -IFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPL---LGTLENI 304
F AA G+ + + +G +Y +WGN+ R LG T N + P + G
Sbjct: 260 FTFTTIAA-GDHSSLAIGSDGNLY--AWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEF 316
Query: 305 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQP 363
Q++A + + LAL S +Y+ G G+LG+ S T +P +L P
Sbjct: 317 TWTQVSARWDHTLALG---SNHNLYAWGWNGYGQLGNTSVPTGSDNPAAYSSKPVLVSTP 373
Query: 364 VVV-----AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
V +AG +H+ +G D ++ WG G LG G + P V+ V
Sbjct: 374 AGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPAGVTFSQF 433
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+ GD + F +S +GD+Y++G LG + A+ + R +++P S RV+
Sbjct: 434 SAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDR--RTPTLISPPDGASAGFTWARVM 491
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 518
+ H A+ G LY++G + GQLGI+ +N
Sbjct: 492 VR--------DDHVLAIGSDGNLYSWGLNEYGQLGIKDIN 523
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 162/404 (40%), Gaps = 52/404 (12%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAAAGA 206
SQ AG HS+A+ S G VYS+G+N GQLG GT + P I G+ R Q +AG
Sbjct: 764 SQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAGT 823
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTK----LVTSPQLVESLKNIFVVQ---AAIG 259
G ++ + G V+A+G +S G+ T +SP V++ + I
Sbjct: 824 GFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGIS 883
Query: 260 NFFTAVLSREGRVYTFSWGND------------ARLGHHTEPNDVEPHPLLGTLENIPVV 307
T VL+ +G+ + WG++ A G T P V+ G
Sbjct: 884 AGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRP--VQVATPQGETTGFHYA 941
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLN----L 361
Q++AG + LA Q G A + G G LG+ S + ++ N
Sbjct: 942 QVSAGGSHSLATDTQ--GRA-WGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGF 998
Query: 362 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 421
P + AG+ H+ + GR+ +WG G LG G+ + P +V +V TG
Sbjct: 999 NPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFTQLTG 1058
Query: 422 DY---TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+ + ++G+++ +G S LG G NR + P + +V
Sbjct: 1059 SRVSGNSLALDQNGNIWGWGQNSSGMLGTGGT--GSLNRPTKMSNPSGIDHFVKVCAGT- 1115
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 522
HT A+ G +G +G+LG NN TE
Sbjct: 1116 -----------GHTLAVASDGSTLGWGDNSQGRLG----NNATE 1144
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 144/366 (39%), Gaps = 48/366 (13%)
Query: 195 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 254
+GIR Q +AG ++ + G VY++G + +G+ G T +T Q+ +
Sbjct: 759 RGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTA-TDRLTPVQIPKPTGVNRFT 817
Query: 255 QAAIGNFFTAVLSREGRVYTFSWGNDARLG-----------HHTEPNDVEPHPLLGTLEN 303
Q + G F+ L +G V+ + + +LG + + P V+ P T N
Sbjct: 818 QVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQ-APSGMTATN 876
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ I+AG ++LA+ Q G A + G GKLG + T Q+ Q
Sbjct: 877 FTLTGISAGITHVLAVDGQ--GRA-WGWGSNEFGKLGVPASTVATTGITTRPVQVATPQG 933
Query: 364 VV-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQAL---- 410
V+AG H+ GR WG + G LG+ ++ + VQA
Sbjct: 934 ETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTN 993
Query: 411 --NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLV 467
+ G + + + G ++S+G + LG + D + V P V
Sbjct: 994 PSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELG---LGDTTTRTAPSMVAMPANV 1050
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL---GIELVNNQTERG 524
++ Q+ V + ++ AL ++G ++ +G G L G +N T+
Sbjct: 1051 STFTQLTGSRV----------SGNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMS 1100
Query: 525 NPERVD 530
NP +D
Sbjct: 1101 NPSGID 1106
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 406 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 465
V A ++ V+ GD + + DG+VYS+G + LG D LTP
Sbjct: 754 VPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATD--------RLTPV 805
Query: 466 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 517
+ VN R Q+S + AL G ++A+G GQLG +
Sbjct: 806 QIPKPTGVN-RFTQVSAGTGF-----SLALDGQGHVWAWGLNSSGQLGSNAI 851
>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
Length = 458
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR + L I+ AA G T+L+ +
Sbjct: 97 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLLPET 156
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 157 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 214
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 215 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 274
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 275 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 331
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 332 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 384
Query: 433 DVYSFG 438
S+G
Sbjct: 385 STISWG 390
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRL+
Sbjct: 75 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEXPRLL 132
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H ++ + G V +G + G LG GN+ ++VP Q + +
Sbjct: 133 EG---LSHEVIVSAACGRNHTLLLPETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 188
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 189 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 248
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 249 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 299
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++ + G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 143 AACGRNHTLLLPETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 201
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 202 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 260
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 261 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 318
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 319 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 369
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 370 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 426
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 427 MGYSHSLVIARD 438
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE LL L + +V A G + L L P
Sbjct: 100 LITTEGKLWSWGRNEKGQLGH-GDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLL---PE 155
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
+V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 156 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 211
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 212 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 271
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 272 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 323
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 324 QIYAGYTC-----SFAVSEVGGLFFWGA 346
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 320 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 373
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 374 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 433
Query: 265 VLSRE 269
V++R+
Sbjct: 434 VIARD 438
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 73 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 117
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT L E+G ++AF
Sbjct: 118 LGH-----GDTKR---VEXPRLLEGLS--HEVIVSAACGRN-----HTLLLPETGSVFAF 162
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 163 GENKMGQLGL---GNQTD 177
>gi|408501217|ref|YP_006865136.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466041|gb|AFU71570.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1078
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 194/440 (44%), Gaps = 69/440 (15%)
Query: 133 LRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP---- 188
+RF + ++ S A S+AV S G Y++G+N QLG+GTT ++ P
Sbjct: 555 IRFNQTSSSSNVKDFSSA----AFSLAVGSDGNAYAWGNNMYSQLGNGTTTDQAMPVQVK 610
Query: 189 RPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 248
+P + +Q +AGA ++ I G VYA+G ++ G+ + + P V
Sbjct: 611 KPAGAPANFTYVQISAGASHSLAIGSDGYVYAWGNNNHGQLGNNTKSNSSI--PVRVYGA 668
Query: 249 KN----IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN- 303
N + VQ G + + L +G V F+WG+ AR G+ T + P + T+++
Sbjct: 669 SNSGEGLKAVQVCAGMWNSMALGIDGTV--FTWGSQAR-GYDTT-SGTTPQTIPTTVKDS 724
Query: 304 ------IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE--- 354
VQI+ + + LA+ VY G G+ G+ + +D H +
Sbjct: 725 SDPSGVFHAVQISTSWSFNLAIGQD---GYVYVWGYNTNGQFGNNT-SDGIHTTTVHSTP 780
Query: 355 ---------QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE---ECES 402
Q + + V+AG WHA V+ ++ ++ WG+ R G +G+G+
Sbjct: 781 SRIPNPAYPQDTSRGWRALQVSAGGWHALVIDEENKIWAWGFNRNGQIGNGSSSDYNANP 840
Query: 403 VPKVVQ-ALND----VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 457
+PK V+ ND +KA V+ G Y + + +G V+++G ++ +G DG N
Sbjct: 841 LPKQVRINPNDSSTGLKATQVSAGIYHSMAIDTNGSVWAWGQNDNGQVG-----DGTTN- 894
Query: 458 HANVLTPQLVTSLKQVNE------RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 511
+ L+P V Q + VQ+ N+ Y H+ A+ G A+G GQ
Sbjct: 895 --DRLSPVKVFDSAQSTSSAGPWLKAVQL---NAGY--KHSLAIDPRGYARAWGNNFSGQ 947
Query: 512 LGIELVNNQTERGNPERVDI 531
LG + NN + NP V +
Sbjct: 948 LGNGISNND-DSANPIPVPV 966
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 262 FTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYCYL 316
F+ + +G Y +WGN+ ++LG+ T + P G N VQI+AG +
Sbjct: 574 FSLAVGSDGNAY--AWGNNMYSQLGNGTTTDQAMPVQVKKPAGAPANFTYVQISAGASHS 631
Query: 317 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN----LQPVVVAAGAWH 372
LA+ S VY+ G G+LG+ ++++ P + + N L+ V V AG W+
Sbjct: 632 LAIG---SDGYVYAWGNNNHGQLGNNTKSNSSIP--VRVYGASNSGEGLKAVQVCAGMWN 686
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVV 428
+ +G DG V TWG G +++P V+ +D A+ ++T +
Sbjct: 687 SMALGIDGTVFTWGSQARGYDTTSGTTPQTIPTTVKDSSDPSGVFHAVQISTSWSFNLAI 746
Query: 429 SEDGDVYSFGCGESASLGHNAIADG--------QGNRHANVLTPQLVTSLKQVNERVVQI 480
+DG VY +G + G+N +DG +R N PQ + R +Q+
Sbjct: 747 GQDGYVYVWGYNTNGQFGNN-TSDGIHTTTVHSTPSRIPNPAYPQDTSR----GWRALQV 801
Query: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
S W H + E K++A+G GQ+G ++ P++V I+
Sbjct: 802 SAGG---W--HALVIDEENKIWAWGFNRNGQIGNGSSSDYNANPLPKQVRIN 848
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 157 SIAVTSKGVVYSFGSNSSGQLG-------HGTTEEEWRPR------PIRSLQGIRIIQAA 203
++A+ G VY +G N++GQ G H TT R P + +G R +Q +
Sbjct: 743 NLAIGQDGYVYVWGYNTNGQFGNNTSDGIHTTTVHSTPSRIPNPAYPQDTSRGWRALQVS 802
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
AG ++I + +++A+G + G+ ++Y +S + Q +
Sbjct: 803 AGGWHALVIDEENKIWAWGFNRNGQIGNGSSSDYNANPLPKQVRINPNDSSTGLKATQVS 862
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-------IPVVQIA 310
G + + + G V+ + ++ ++G T + + P + + ++ + VQ+
Sbjct: 863 AGIYHSMAIDTNGSVWAWGQNDNGQVGDGTTNDRLSPVKVFDSAQSTSSAGPWLKAVQLN 922
Query: 311 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 368
AGY + +LA P G A + G G+LG+G ++ I + NLQPV+ A
Sbjct: 923 AGYKH--SLAIDPRGYA-RAWGNNFSGQLGNGISNNDDSANPIPVPVMFNLQPVITGA 977
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQG-------IRI 199
+Q AG HS+A+ + G V+++G N +GQ+G GTT + P + S Q ++
Sbjct: 859 TQVSAGIYHSMAIDTNGSVWAWGQNDNGQVGDGTTNDRLSPVKVFDSAQSTSSAGPWLKA 918
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 251
+Q AG ++ I G A+G + G+ G+ +P V + N+
Sbjct: 919 VQLNAGYKHSLAIDPRGYARAWGNNFSGQLGNGISNNDDSANPIPVPVMFNL 970
>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
Length = 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 64/382 (16%)
Query: 109 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 154
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 20 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGC 79
Query: 155 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 80 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 139
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 140 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 197
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 297
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 198 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 257
Query: 298 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 258 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 314
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 315 DFPGRGASRIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 368
Query: 417 HVATGDYTTFVVSEDGDVYSFG 438
+A G ++ +V+ D S+G
Sbjct: 369 SLACGK-SSIIVAADESTISWG 389
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 142 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 200
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 201 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 259
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 260 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 317
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
+I AGY C AV VG + SR +P+ ++ ++
Sbjct: 318 GRGASRIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 368
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 369 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 425
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 426 MGYSHSLVIARD 437
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 74 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 131
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 132 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 187
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 188 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 247
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 248 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 298
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 99 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 157
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 158 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 210
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 211 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 270
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 271 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 322
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
+I + +FA++E G L+ +GA
Sbjct: 323 RIYAGYTC-----SFAVSEVGGLFFWGA 345
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 72 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 116
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 117 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 161
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 162 GENKMGQLGL---GNQTD 176
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R S+ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 319 RGASRIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 372
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 373 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 432
Query: 265 VLSRE 269
V++R+
Sbjct: 433 VIARD 437
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 165/358 (46%), Gaps = 25/358 (6%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI---RIIQAAAG 205
Q I G + + + G V + G S G+LG G +++ + +LQG +++ +
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGS 1084
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
G ++ ++++G+V+++G +G+ +G + P+ +E+L+ V+Q A G +AV
Sbjct: 1085 DGHSLALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQGEEVIQIACGFKHSAV 1142
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 325
++ +G++ TF G+ RLG T N P + LEN + +A G + + ++ G
Sbjct: 1143 VTVDGKLLTFGNGDYGRLGLGTVCNRKTPER-VKALENYHIGHVACGLNHTVCVS--ADG 1199
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
++ G G GKLG G+ + + P IE L ++ VA G + + +DG V TW
Sbjct: 1200 STTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKK--VACGTQFSVALTRDGFVLTW 1257
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 445
G R P+ V L V G T ++ DG+V+ +G
Sbjct: 1258 GQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLN----- 1312
Query: 446 GHNAIADGQ-GNRHA-NVLTPQLVTSLKQVNERVVQISL--TNSIYWNAHTFALTESG 499
ADGQ G H V PQL+ L +E + QIS T+S W+ A SG
Sbjct: 1313 -----ADGQLGLGHTGTVREPQLLGGLGS-SEPIKQISAGRTHSAAWSGAKAASVRSG 1364
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 33/321 (10%)
Query: 201 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ--AAI 258
Q G T +I G V A G+ S+G G + + S +V +L+ V Q ++
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQG--NSDDLHSLTIVSALQGFVVTQLVTSV 1082
Query: 259 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G + + L+ G V+++ G+ +LGH P + L+ V+QIA G+ +
Sbjct: 1083 GSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQIACGFKHSA 1141
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
+ + + G G G+LG G+ + K P ++ + N VA G H V
Sbjct: 1142 VVTVDGK---LLTFGNGDYGRLGLGTVCNRKTPERVKALE--NYHIGHVACGLNHTVCVS 1196
Query: 378 QDGRVCTW--GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
DG TW G G YG LG GN +S P ++AL+ +K VA G + ++ DG V
Sbjct: 1197 ADGST-TWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVL 1255
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ--VNERVVQISLTNSIYWNAHTF 493
++ G+ +G + Q H TPQ VT+L + E VV + HT
Sbjct: 1256 TW--GQDRLIGQT---EAQMRGHC---TPQKVTTLAGHFIEEVVVG---------SEHTL 1298
Query: 494 ALTESGKLYAFGAGDKGQLGI 514
ALT G ++ +G GQLG+
Sbjct: 1299 ALTSDGNVWGWGLNADGQLGL 1319
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWG 386
V + G G G+LG G+ D ++ Q + +V + G+ H+ + + G V +WG
Sbjct: 1042 VLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWG 1101
Query: 387 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
G YG LGHGN + + P+ ++AL + I +A G + VV+ DG + +FG G+ LG
Sbjct: 1102 DGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLG 1161
Query: 447 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 506
+ N TP+ V +L+ + V L +++ +A + +AFG
Sbjct: 1162 LGTV--------CNRKTPERVKALENYHIGHVACGLNHTVCVSA------DGSTTWAFGD 1207
Query: 507 GDKGQLGIELVNNQTERGNPERVD 530
GD G+LG+ N + + P +++
Sbjct: 1208 GDYGKLGL---GNTSAKSTPVKIE 1228
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 140 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
EA E Q G HS VT G + +FG+ G+LG GT P +++L+ I
Sbjct: 1123 EALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHI 1182
Query: 200 IQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 258
A G T+ +S D +AFG +G + G+ T ++P +E+L + V + A
Sbjct: 1183 GHVACGLNHTVCVSADGSTTWAFGDGDYG--KLGLGNTSAKSTPVKIEALSGLKVKKVAC 1240
Query: 259 GNFFTAVLSREGRVYTFSWGNDARLGH-------HTEPNDVEPHPLLGTLENIPVVQIAA 311
G F+ L+R+G + +WG D +G H P V TL + ++
Sbjct: 1241 GTQFSVALTRDG--FVLTWGQDRLIGQTEAQMRGHCTPQKVT------TLAGHFIEEVVV 1292
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
G + LAL S V+ G G+LG G + P+L+
Sbjct: 1293 GSEHTLALT---SDGNVWGWGLNADGQLGLGHTGTVREPQLL 1331
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 155/358 (43%), Gaps = 42/358 (11%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
P+ + + + + G LI+ G+V+ +G+ S G+ + V V+SP +VES
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMD--VSSPTIVES 353
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLEN 303
L V A G + T L+ G + F WG + G+ + P + G L
Sbjct: 354 LDGFLVKFVACGEYQTCALTDSGEL--FVWGENKYGGNLVCEERTGSQWLPRQISGPLAG 411
Query: 304 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 363
+ + +A G + A++ S +++ G G G LGHG+ HP+ +E + L ++
Sbjct: 412 VSISNVACGDWHTAAVS---SSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKS 468
Query: 364 VVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
V A G+WH A + G G++ TWG G G LGH + E + P V L +
Sbjct: 469 V--ACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVE 526
Query: 413 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
+ V+ G T ++ G +Y+ G LG N A + +V K
Sbjct: 527 HDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLG---------NPQAKNKSIAIVEG-KL 576
Query: 473 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 530
E V +IS + H ALT G +Y +G G GQLG+ N +R P V+
Sbjct: 577 KEEFVKEISSGS-----YHVAALTSGGSVYTWGKGTNGQLGL---GNVEDRNVPTLVE 626
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 78/344 (22%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ +T +G V+ +G S G+LGH + P + SL G + A G +T +
Sbjct: 313 GRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQTCAL 372
Query: 213 SDAGQVYAFGKD------------------------------------------------ 224
+D+G+++ +G++
Sbjct: 373 TDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQ 432
Query: 225 --SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTA-----VLSR------ 268
++G+ +GV G + V+ P+ VESLK ++V A G++ TA + R
Sbjct: 433 LFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGV 492
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
G+++T+ G+ RLGH ++P + +E+ VQ++ G +L +A +G +
Sbjct: 493 GGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEH-DFVQVSCG--RMLTVALTRTG-KI 548
Query: 329 YSVGCGLGGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
Y++G + G+LG+ ++ +L E+F +++G++H A + G V T
Sbjct: 549 YTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEF------VKEISSGSYHVAALTSGGSVYT 602
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 428
WG G G LG GN E +VP +V+AL D + +A G T +
Sbjct: 603 WGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAI 646
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 33/305 (10%)
Query: 231 YGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
+G T V S P+L+E + V ++G A++++ G V+ + G+ +LGH +
Sbjct: 283 FGYHSTLQVDSLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVD 342
Query: 289 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 348
DV ++ +L+ V +A G AL SG GG L RT +
Sbjct: 343 -MDVSSPTIVESLDGFLVKFVACGEYQTCALT--DSGELFVWGENKYGGNLVCEERTGSQ 399
Query: 349 H-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 407
PR I L + VA G WH A V G++ T+G G +G LGHGN + S PK V
Sbjct: 400 WLPRQISG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEV 458
Query: 408 QALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGN 456
++L + VA G + T + + G ++++G G+ LGH +
Sbjct: 459 ESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKK--- 515
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 516
L P V L V VQ+S + T ALT +GK+Y G+ GQLG
Sbjct: 516 -----LQPTCVAQL--VEHDFVQVSCGRML-----TVALTRTGKIYTMGSSVHGQLGNPQ 563
Query: 517 VNNQT 521
N++
Sbjct: 564 AKNKS 568
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 30/256 (11%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
S G H+ AV+S G ++++G + G LGHG + P+ + SL+G+ + A G+
Sbjct: 415 SNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSW 474
Query: 208 RTMLISDA-----------GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
T I D G+++ +G G + KL P V L VQ
Sbjct: 475 HTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKL--QPTCVAQLVEHDFVQV 532
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND----VEPHPLLGTLENIPVVQIAAG 312
+ G T L+R G++YT +LG+ N VE G L+ V +I++G
Sbjct: 533 SCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVE-----GKLKEEFVKEISSG 587
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-----VVA 367
++ AL SG +VY+ G G G+LG G+ D P L+E + +Q + + A
Sbjct: 588 SYHVAALT---SGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTA 644
Query: 368 AGAWHAAVVGQDGRVC 383
A H ++ D C
Sbjct: 645 AICLHKSISVSDQSAC 660
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 158/316 (50%), Gaps = 22/316 (6%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H+ + G V++FG N+ GQLG G T+ +P I+SL+ ++ Q A G T+L
Sbjct: 33 GDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGRSHTLLA 92
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+++G++Y+FG ++ + G+ K V SP +++ L++ V + G + + VL+ +G V
Sbjct: 93 TESGKIYSFGCNNDRQLGLGLDDEK-VCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSV 151
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSV 331
Y + G + +LG DV H L+ + VV IA GY Y AL +G + +
Sbjct: 152 YLWGGGEEGQLGF---GEDVTKHETPERLDVDDEVVCIACGY-YHTALV--TAGGKLLTF 205
Query: 332 GCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR 389
G GKLG GS T D P++++ + V VA G H A+ G V T+G G
Sbjct: 206 GETDEGKLGRGSDTGDNCLPKVVDGIE---GHVVSVACGGAHTVAITGW--LVYTFGNGS 260
Query: 390 YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
G LGHGN ++ P + K + G+ T +V++ G +++ G G H
Sbjct: 261 SGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGENHTALVTDRGQLWTCGDGR-----HG 315
Query: 449 AIADGQGNRHANVLTP 464
+A G+ N AN P
Sbjct: 316 KLALGEEN-FANQFKP 330
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 27/319 (8%)
Query: 198 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 257
+++ + G T L++ G+V+ FG +++G + G+ TK VT P ++SLK V Q A
Sbjct: 26 KVLHISCGDEHTSLLAGDGRVFTFGDNAWG--QLGLGHTKPVTKPTRIKSLKAEKVHQVA 83
Query: 258 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 317
G T + + G++Y+F ND +LG + V ++ LE+ V ++AG +
Sbjct: 84 CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSC 143
Query: 318 ALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
L + S VY G G G+LG G T + P ++ ++ + V +A G +H A+V
Sbjct: 144 VLTDKGS---VYLWGGGEEGQLGFGEDVTKHETPERLD----VDDEVVCIACGYYHTALV 196
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 435
G++ T+G G LG G++ ++ +PKVV + + + VA G T ++ VY
Sbjct: 197 TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAIT-GWLVY 254
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 495
+FG G S LGH GN TP + K R HT +
Sbjct: 255 TFGNGSSGQLGH-------GNMLLQADTPHKIVWQKPTKVRSASCG-------ENHTALV 300
Query: 496 TESGKLYAFGAGDKGQLGI 514
T+ G+L+ G G G+L +
Sbjct: 301 TDRGQLWTCGDGRHGKLAL 319
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 22/257 (8%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLQGIRIIQAAAGAG 207
Q G H++ T G +YSFG N+ QLG G +E+ P I+ L+ + +AG
Sbjct: 81 QVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMY 140
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +++D G VY +G G+ +G TK T +L + VV A G + TA+++
Sbjct: 141 HSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDE---VVCIACGYYHTALVT 197
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
G++ TF ++ +LG ++ D ++ +E VV +A G + +A+ +G
Sbjct: 198 AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACGGAHTVAI----TGWL 252
Query: 328 VYSVGCGLGGKLGHGS---RTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGR 381
VY+ G G G+LGHG+ + D H +++ Q +P V + G H A+V G+
Sbjct: 253 VYTFGNGSSGQLGHGNMLLQADTPH-KIVWQ------KPTKVRSASCGENHTALVTDRGQ 305
Query: 382 VCTWGWGRYGCLGHGNE 398
+ T G GR+G L G E
Sbjct: 306 LWTCGDGRHGKLALGEE 322
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
+F + + + ++ G H +++ DGRV T+G +G LG G+ + + P +++L K
Sbjct: 19 KFWIREDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEK 78
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
VA G T + +E G +YSFGC L G G V +P T +K +
Sbjct: 79 VHQVACGRSHTLLATESGKIYSFGCNNDRQL-------GLGLDDEKVCSP---TVIKGLE 128
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 532
V++ L+ +Y H+ LT+ G +Y +G G++GQLG + T+ PER+D+D
Sbjct: 129 SHAVKM-LSAGMY---HSCVLTDKGSVYLWGGGEEGQLGFG--EDVTKHETPERLDVD 180
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 21/318 (6%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR ++ G ++ A G + ++ +G+V +G++ +G+ G Q + P V S
Sbjct: 20 PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQ--EQTEHPTFVGS 77
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L + + + G T V+S +GRV+++ G + +LGH + N P ++ + V+
Sbjct: 78 LFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTP-SVVQAMRGRDVL 136
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
+ G + + + +G +Y+ G G+ G GS +D P+ +E + +Q +
Sbjct: 137 AVTCGVGHTVIVL---AGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQH--AS 191
Query: 368 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 427
GA H AVV G V T+G G G LGHG+ + S+P+ V AL + VA G+ T
Sbjct: 192 CGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVC 251
Query: 428 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 487
+ D V+ FG LG ++ + H + P+ + LK E V++ N
Sbjct: 252 AAFDHRVFGFGLNNVGQLGASSTS------HPYLSEPRQMEFLK---EEEVELCKCN--- 299
Query: 488 WNAHTFALTESGKLYAFG 505
+ ALT G L A+G
Sbjct: 300 -QSEVIALTRRGALRAWG 316
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ V+ G V+S+G ++GQLGHG+ + P +++++G ++ G G T+++
Sbjct: 89 GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIV 148
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G++Y G + G+ GV T + SPQ VESL+ V A+ G TAV++ G V
Sbjct: 149 LAGGELYTCGWNKNGQC--GVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEV 206
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+TF G+ +LG H + D+ +G L I + +A G Y + C V+ G
Sbjct: 207 FTFGSGSCGQLG-HGDCQDLSMPRRVGALVGIVMSMVACGEEYTV---CAAFDHRVFGFG 262
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
G+LG S + HP L E Q+ L+
Sbjct: 263 LNNVGQLGASSTS---HPYLSEPRQMEFLK 289
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 337 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 396
G+ G G++ +HP + L + + V+ G H VV +DGRV +WG G G LGHG
Sbjct: 59 GQCGTGTQEQTEHPTFVGS--LFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG 116
Query: 397 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 456
+ + + P VVQA+ + V G T +V G++Y+ G ++ G + +D
Sbjct: 117 SRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSD---- 172
Query: 457 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+L+PQ V SL+ E V S HT +T G+++ FG+G GQLG
Sbjct: 173 ----LLSPQCVESLR--GEGVQHASCG-----AGHTAVVTGGGEVFTFGSGSCGQLG 218
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R+ G HS V G V +G N GQ G GT E+ P + SL G+ + +
Sbjct: 29 RQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSC 88
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G T+++S+ G+V+++G + G+ +G + +T+P +V++++ V+ G T
Sbjct: 89 GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDN--LTTPSVVQAMRGRDVLAVTCGVGHTV 146
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
++ G +YT W + + G + + + P +E++ + C A
Sbjct: 147 IVLAGGELYTCGWNKNGQCGVGSTSDLLSPQ----CVESLRGEGVQHASCGAGHTAVVTG 202
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 384
G V++ G G G+LGHG D PR + L+ + +VA G + D RV
Sbjct: 203 GGEVFTFGSGSCGQLGHGDCQDLSMPRRVG--ALVGIVMSMVACGEEYTVCAAFDHRVFG 260
Query: 385 WGWGRYGCLG 394
+G G LG
Sbjct: 261 FGLNNVGQLG 270
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 342 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 401
G + PR++++ + Q VA G H+A+V G V WG +YG G G +E
Sbjct: 12 GEQVSSSTPRMLKK--AMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQT 69
Query: 402 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 461
P V +L V + V+ G T VVSEDG V+S+G G + LGH G+R N+
Sbjct: 70 EHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGH-------GSRD-NL 121
Query: 462 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 514
TP +V +++ + V + HT + G+LY G GQ G+
Sbjct: 122 TTPSVVQAMRGRDVLAVTCGV-------GHTVIVLAGGELYTCGWNKNGQCGV 167
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 23/275 (8%)
Query: 240 TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 298
++P++++ V A G +A++ G V WG + T + HP +
Sbjct: 18 STPRMLKKAMGRQVRDVACGLVHSAMVMGSGEV--LCWGENKYGQCGTGTQEQTEHPTFV 75
Query: 299 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 358
G+L + + ++ G + + ++ V+S G G G+LGHGSR + P +++ +
Sbjct: 76 GSLFGVACMSVSCGGAHTVVVS---EDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRG 132
Query: 359 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 418
++ + V G H +V G + T GW + G G G+ P+ V++L H
Sbjct: 133 RDV--LAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHA 190
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
+ G T VV+ G+V++FG G LGH D + P+ V +L V
Sbjct: 191 SCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQD--------LSMPRRVGAL-------V 235
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
I ++ +T +++ FG + GQLG
Sbjct: 236 GIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLG 270
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 144 RRENSQ-AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQA 202
R E Q A G GH+ VT G V++FGS S GQLGHG ++ PR + +L GI +
Sbjct: 183 RGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMV 242
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
A G T+ + +V+ FG ++ G+ ++ P+ +E LK V
Sbjct: 243 ACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCNQSE 302
Query: 263 TAVLSREGRVYTFSWG 278
L+R G + +WG
Sbjct: 303 VIALTRRGALR--AWG 316
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 188/418 (44%), Gaps = 65/418 (15%)
Query: 151 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-------------PRPIRSLQGI 197
+ G HS A+ + VY++G N +LG ++E + P + L
Sbjct: 34 VCGANHSYAIDTNFEVYAWGCNLGRKLG--LSDEYYNQIFQADIPEQIKIPVKVTELSNK 91
Query: 198 RIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
+I + G + S + QVY +G +G+ G + +K + P++ LK +Q
Sbjct: 92 KINNISTGTNHSFAWSTELNQVYCWGIGEYGKL--GNKESKDLQYPEIFNGLKQPEGIQW 149
Query: 257 AIG------NFFTAVLSR--------EGRVYTFSWGNDARLGHHT-------EPNDVEPH 295
I N AV+ + + ++Y + +D +LG T +P ++ P
Sbjct: 150 EISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPD 209
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIE 354
G +E++ C +A G ++S G G +LG+ + ++KHP IE
Sbjct: 210 YWEGNVESVKA-------CSDFTIAIDKQGR-IFSWGKGGFNRLGYKAEIVNQKHPLQIE 261
Query: 355 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 414
L Q + + G++H+A + +GR+ TWG G LGHG + + PK VQAL +
Sbjct: 262 S--LSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTY 319
Query: 415 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 474
+ VA G+ T +S++ +++S+G S L G+ + + P+ ++ + +
Sbjct: 320 IVSVACGEGHTLALSKNNELFSWGLNSSGQL-------GRASENLKSSDPKKISFFE--D 370
Query: 475 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN-QTERGNPERVDI 531
+ + QI+ + H+ L + G +Y++G+ GQLG + +N Q + + VD+
Sbjct: 371 KSIKQIACG-----SKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNTIASSQNVDL 423
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
Query: 137 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG 196
L E+ +++ Q G HS A+T+ G +Y++G +S+GQLGHG + + P+ +++LQ
Sbjct: 258 LQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQN 317
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
I+ A G G T+ +S +++++G +S G+ + K + P+ + ++ + Q
Sbjct: 318 TYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLK-SSDPKKISFFEDKSIKQI 376
Query: 257 AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN 290
A G+ + VL ++G VY SWG++ +LG + N
Sbjct: 377 ACGSKHSLVLLQDGTVY--SWGSNQYGQLGFDQDSN 410
>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 151/300 (50%), Gaps = 31/300 (10%)
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
++++S+ +V+ +G +S + G Q L+ P++ S ++A G + T V+S
Sbjct: 368 SLVVSENSEVFVWGSNSSHQLAEGSQEKILL--PKMAISFAESQQIEA--GQYCTFVISS 423
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC---YLLALACQPSG 325
+G V G+ RLG N + L +N + +I++ + LAL +
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSEGQ- 480
Query: 326 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 385
V+S G G GKLGHG+ +K+P++I L+ V ++AG H+A V DG++ TW
Sbjct: 481 --VFSWGDGDYGKLGHGNTLTQKYPKVILGV-LMGKVVVCISAGYRHSACVTDDGQLYTW 537
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 444
G G YG LGHG+ +VP +V+ +++V V G T VS+D V+SFG G++
Sbjct: 538 GEGDYGRLGHGDSNSRNVPTLVKDVSNVG--KVVCGSSHTIAVSQDSRTVWSFGGGDNGK 595
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G NR + P+++ SL + + V +S+ ALT +G+L F
Sbjct: 596 LGH-----GDTNR---IYKPKIIESLIGLFIKKVGCGSQSSL-------ALTSTGQLCTF 640
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 14/300 (4%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
+S+ V+ V+ +GSNSS QL G+ E+ P+ S + I+ AG T +IS
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQQIE--AGQYCTFVISSD 424
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V A GK S+G G + ++ + + + T L+ EG+V+++
Sbjct: 425 GSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSW 484
Query: 276 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 335
G+ +LGH P +LG L VV I+AGY + AC +Y+ G G
Sbjct: 485 GDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRH---SACVTDDGQLYTWGEGD 541
Query: 336 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLG 394
G+LGHG P L++ N+ VV G+ H V QD R V ++G G G LG
Sbjct: 542 YGRLGHGDSNSRNVPTLVKDVS--NVGKVV--CGSSHTIAVSQDSRTVWSFGGGDNGKLG 597
Query: 395 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF----GCGESASLGHNAI 450
HG+ PK++++L + V G ++ ++ G + +F C + ++LG ++
Sbjct: 598 HGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTFIKKQPCNQHSTLGTQSV 657
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LQGIRIIQAAAGA 206
S + GH++A+TS+G V+S+G G+LGHG T + P+ I L G ++ +AG
Sbjct: 463 SSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGY 522
Query: 207 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 266
+ ++D GQ+Y +G+ +G +G ++ V P LV+ + N+ V G+ T +
Sbjct: 523 RHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNV--PTLVKDVSNVGKV--VCGSSHTIAV 578
Query: 267 SREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
S++ R V++F G++ +LG H + N + ++ +L + + ++ G LAL
Sbjct: 579 SQDSRTVWSFGGGDNGKLG-HGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLAL 631
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 41/250 (16%)
Query: 275 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG-YCYLLALACQPSGMAVYSV 331
F WG+++ +L ++ + P + E+ QI AG YC + S +V +
Sbjct: 378 FVWGSNSSHQLAEGSQEKILLPKMAISFAES---QQIEAGQYCTFVI----SSDGSVRAC 430
Query: 332 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA------AGAWHAAVVGQDGRVCTW 385
G G G+LG G ++ Q + LN ++ H + +G+V +W
Sbjct: 431 GKGSYGRLGLGDSNNQT------QLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSW 484
Query: 386 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS 444
G G YG LGHGN + PKV+ + K + + Y + V++DG +Y++G G+
Sbjct: 485 GDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGR 544
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYA 503
LGH G N NV P LV + V + V ++HT A+++ + +++
Sbjct: 545 LGH-----GDSNSR-NV--PTLVKDVSNVGKVVCG---------SSHTIAVSQDSRTVWS 587
Query: 504 FGAGDKGQLG 513
FG GD G+LG
Sbjct: 588 FGGGDNGKLG 597
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 431
++ VV ++ V WG L G++E +PK+ A++ ++ + G Y TFV+S D
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSD 424
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTNSIYWNA 490
G V + G G LG G N T LK++N + + +++S +
Sbjct: 425 GSVRACGKGSYGRLGL-----GDSNNQ---------TQLKKLNFDNSIITRISSSKGSDG 470
Query: 491 HTFALTESGKLYAFGAGDKGQLG 513
HT ALT G+++++G GD G+LG
Sbjct: 471 HTLALTSEGQVFSWGDGDYGKLG 493
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 149 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+ + G H+IAV+ V+SFG +G+LGHG T ++P+ I SL G+ I + G+
Sbjct: 567 KVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQ 626
Query: 208 RTMLISDAGQVYAFGK 223
++ ++ GQ+ F K
Sbjct: 627 SSLALTSTGQLCTFIK 642
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 328 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 387
V+ G +L GS+ P++ F + + AG + V+ DG V G
Sbjct: 377 VFVWGSNSSHQLAEGSQEKILLPKMAISFA----ESQQIEAGQYCTFVISSDGSVRACGK 432
Query: 388 GRYGCLGHGNEECESVPKVVQALNDV-KAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 445
G YG LG G+ ++ K + N + I + G D T ++ +G V+S+G G+ L
Sbjct: 433 GSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKL 492
Query: 446 GHNAIADGQGNRHANVLT---PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 502
GH N LT P+++ + + + VV IS H+ +T+ G+LY
Sbjct: 493 GH-----------GNTLTQKYPKVILGV-LMGKVVVCISAGYR-----HSACVTDDGQLY 535
Query: 503 AFGAGDKGQLG 513
+G GD G+LG
Sbjct: 536 TWGEGDYGRLG 546
>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
Length = 1996
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 38/328 (11%)
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
I A G L++ G+V+ + +++ G +G+Q V P+LVE L + A G
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVD--VCRPKLVEFLALTNIDFVACG 1262
Query: 260 NFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 315
+ T +S G ++T WG N LGH ++ + P + G +E + V+ +A G +
Sbjct: 1263 EYHTCAVSTSGDLFT--WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG-TW 1319
Query: 316 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA- 374
ALA + +++ G G G LGHG R +P+ ++ L L+ + VA G WH
Sbjct: 1320 HSALA--TANGKLFTFGDGAFGVLGHGDRESVSYPKEVK--MLSGLKTLKVACGVWHTVA 1375
Query: 375 ---VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 425
V+ Q G ++ TWG G LGHGN+E +P V +L D +A G T
Sbjct: 1376 IVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFT 1435
Query: 426 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 485
++ G V++ G LG ++ +DG+ P LV + V E V +IS +
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLG-SSNSDGK--------LPCLVQD-RLVGEFVEEISCGDH 1485
Query: 486 IYWNAHTFALTESGKLYAFGAGDKGQLG 513
H LT +++ +G G G+LG
Sbjct: 1486 -----HVAVLTSRSEVFTWGKGSNGRLG 1508
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 37/337 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H VT +G V+++ + G+LGHG + RP+ + L I A G T +
Sbjct: 1210 GVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAV 1269
Query: 213 SDAGQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLKNIFVVQAAIGNFFT 263
S +G ++ +G G G+ G K V+ P VE L+ V+ A G + +
Sbjct: 1270 STSGDLFTWGD---GIHNVGLLGHGSDLSHWIPKRVSGP--VEGLQ---VLSVACGTWHS 1321
Query: 264 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA--- 320
A+ + G+++TF G LGH + P + L + +++A G + +A+
Sbjct: 1322 ALATANGKLFTFGDGAFGVLGHGDRESVSYPKE-VKMLSGLKTLKVACGVWHTVAIVEVM 1380
Query: 321 ----CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 376
S +++ G G +LGHG++ P + N +A G +
Sbjct: 1381 NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQ--IACGHTFTVAL 1438
Query: 377 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVY 435
G V T G +G LG N + + +P +VQ L ++ GD+ V++ +V+
Sbjct: 1439 TTSGHVFTMGGTSHGQLGSSNSDGK-LPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVF 1497
Query: 436 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 472
++G G + LGH D + TP LV +L++
Sbjct: 1498 TWGKGSNGRLGHGDKDDRK--------TPTLVEALRE 1526
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 34/338 (10%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G HS T+ G +++FG + G LGHG E P+ ++ L G++ ++ A G T+ I
Sbjct: 1317 GTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAI 1376
Query: 213 ----------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
+ + +++ +G +G + T L+ P V SL + Q A G+ F
Sbjct: 1377 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL--PTCVSSLIDYNFNQIACGHTF 1434
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
T L+ G V+T + +LG + P + L V +I+ G ++ L
Sbjct: 1435 TVALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQDRLVGEFVEEISCGDHHVAVLT-- 1491
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 382
S V++ G G G+LGHG + D K P L+E + +++ ++ GA + G
Sbjct: 1492 -SRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKS--ISCGADQSVCSG----- 1543
Query: 383 CTWGWG----RYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDYTTFVVSEDGD 433
C +G R+ C G C + K A K V YT E G
Sbjct: 1544 CRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLKAGESG- 1602
Query: 434 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 471
Y+ S DG G ++ + +++ S K
Sbjct: 1603 -YNSNVANRNSTTPTRSLDGTGRPDRDIRSSRILLSPK 1639
>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
Length = 488
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 127 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 186
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 187 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 244
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 245 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 304
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 305 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 361
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 362 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 414
Query: 433 DVYSFG 438
S+G
Sbjct: 415 STISWG 420
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 173 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 231
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 232 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 290
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 291 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 348
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 349 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 399
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 400 SLACGKS---SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 456
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 457 MGYSHSLVIARD 468
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 105 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 162
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 163 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 218
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 219 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 278
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 279 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 329
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 47/270 (17%)
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+ +++ EG+++++ +LGH + VE L+ L + +V A G + LAL
Sbjct: 128 SLLITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 186
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
S V++ G G+LG G++TD P I + N QP+ +A GA + ++ G
Sbjct: 187 GS---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 239
Query: 381 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 416
+ ++G YG LGH ++ +CE VP+ V + +V
Sbjct: 240 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 299
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 300 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 351
Query: 477 VVQISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 352 ASQIYAGYTC-----SFAVSEVGGLFFWGA 376
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 350 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 403
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 404 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 463
Query: 265 VLSRE 269
V++R+
Sbjct: 464 VIARD 468
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 103 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 147
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 148 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 192
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 193 GENKMGQLGL---GNQTD 207
>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pan paniscus]
gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Gorilla gorilla gorilla]
gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
Length = 932
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 297
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR- 65
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 66 VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 417 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 350 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 407
PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V
Sbjct: 10 PRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++L + VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 67 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPR 168
Query: 528 RV 529
RV
Sbjct: 169 RV 170
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 355
L+ L ++Q++ G + LALA ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
++++ G+ T V+++ G V++FG G LGH+++ D R L+ +
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGS 176
Query: 476 RVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
V QI+ HT A SG +YAFG G +GQLG
Sbjct: 177 EVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 368 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECES 402
G H A V G + +G G G LG G N +C S
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 221
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Papio anubis]
Length = 932
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 297
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR- 65
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 66 VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 417 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 350 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 407
PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V
Sbjct: 10 PRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++L + VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 67 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPR 168
Query: 528 RV 529
RV
Sbjct: 169 RV 170
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 355
L+ L ++Q++ G + LALA ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
++++ G+ T V+++ G V++FG G LGH+++ D R L+ +
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGS 176
Query: 476 RVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
V QI+ HT A SG +YAFG G +GQLG
Sbjct: 177 EVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 368 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECES 402
G H A V G + +G G G LG G N +C S
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 221
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Nomascus leucogenys]
Length = 932
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G H +A+ + G +++G NS GQLG G + P+ +RSL+GI + Q AAG
Sbjct: 23 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 82
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 267
+ +S +G V+ +G ++ G+ G+ K SP V+ L+ VV + G TAVL+
Sbjct: 83 HSFALSLSGAVFGWGMNNAGQL--GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 268 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 327
+ G V+TF G+ +LGH + ++V P +L L V QIA G + LA PS
Sbjct: 141 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGL 197
Query: 328 VYSVGCGLGGKLGHGSRTDEKHP 350
+Y+ GCG G+LG G + K P
Sbjct: 198 IYAFGCGARGQLGTGHTCNVKCP 220
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 239 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 297
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 7 VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR- 65
Query: 298 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 357
+ +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P + +
Sbjct: 66 VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119
Query: 358 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179
Query: 417 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 446
+A G +T V G +Y+FGCG LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 350 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 407
PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG G E ++ P+ V
Sbjct: 10 PRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66
Query: 408 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++L + VA G +F +S G V+ +G + LG + D + H +L Q
Sbjct: 67 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 527
+VV IS HT LT+SG ++ FGAG GQLG + +N++ NP
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPR 168
Query: 528 RV 529
RV
Sbjct: 169 RV 170
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 297 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 355
L+ L ++Q++ G + LALA ++ G G+LG G + P+ +
Sbjct: 12 LIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRS 68
Query: 356 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 415
+ + L V AAG H+ + G V WG G LG +E+ P V+ L K
Sbjct: 69 LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126
Query: 416 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 475
++++ G+ T V+++ G V++FG G LGH+++ D R L+ +
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGS 176
Query: 476 RVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 513
V QI+ HT A SG +YAFG G +GQLG
Sbjct: 177 EVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 11/219 (5%)
Query: 188 PRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 247
PR I+ L I+Q + G + ++ GQ + +GK+S G+ G + SPQ V S
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QASPQRVRS 68
Query: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 307
L+ I + Q A G + LS G V+ + N +LG E D E + L VV
Sbjct: 69 LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127
Query: 308 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 367
I+ G + L SG V++ G G G+LGH S DE +PR + +L+ + +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIA 182
Query: 368 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECES 402
G H A V G + +G G G LG G N +C S
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 221
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAG 207
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L+ +++ + G
Sbjct: 75 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 134
Query: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 266
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 135 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 192
Query: 267 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 299
G +Y F G +LG N P P+ G
Sbjct: 193 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 225
>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
AltName: Full=Telophase disk protein of 60 kDa
gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
Length = 522
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)
Query: 109 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 154
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 85 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144
Query: 155 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 205 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 262
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 297
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 298 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 380 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 433
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
+A G ++ +V+ D S+ G S + G D ++ + Q V +L +
Sbjct: 434 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 487
Query: 477 VVQISLTNSI 486
V + ++S+
Sbjct: 488 QVAMGYSHSL 497
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 265
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 325 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 382
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 383 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 433
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 434 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 490
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 491 MGYSHSLVIARD 502
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 197 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 384 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 437
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 438 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 497
Query: 265 VLSRE 269
V++R+
Sbjct: 498 VIARD 502
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 226
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 23/320 (7%)
Query: 145 RENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLQGIRIIQA 202
R+N ++I AG HS + G VY++G GQLGH TE E P + ++
Sbjct: 35 RKNVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAV 94
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNF 261
A G T++++D G +Y +G++ G+ G K SP L++S N+ V+ A G F
Sbjct: 95 ACGRNHTVVVTDNGLIYTWGENKAGQ--LGTGDLKSSNSPVLIDSALNLPSVLSIACGEF 152
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
T + EG ++++ +LGH P ++G + I ++ A G + L L
Sbjct: 153 HTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKI-CIRAACGGQHTLVLT- 210
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 379
+Y+ G G+LG +R+D+ P +++ + V+ G H+ + ++
Sbjct: 211 --DANKIYAWGSNAYGQLGL-NRSDKAVLQPDIVDHLRRSGACHVL--CGYSHSMALMKN 265
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGD----- 433
++ TWG G LG G+ VP++V AL V+ +A G D+ V+++ +
Sbjct: 266 EQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPP 325
Query: 434 ---VYSFGCGESASLGHNAI 450
VYS+G GE LGHN +
Sbjct: 326 LEHVYSWGRGEEGQLGHNEL 345
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++A+ +G ++S+G N GQLGHG T+ + P + + I+AA G T+++
Sbjct: 150 GEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVL 209
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
+DA ++YA+G +++G+ + K V P +V+ L+ G + L + ++
Sbjct: 210 TDANKIYAWGSNAYGQLGLN-RSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQI 268
Query: 273 YTFSWG-NDA---RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQ----- 322
YT WG ND LGH+T P P L+ L ++ V QIA GY + +A
Sbjct: 269 YT--WGRNDCGQLGLGHYTH----SPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG 322
Query: 323 -PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 354
P VYS G G G+LGH PR++E
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 32/305 (10%)
Query: 218 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESL------KNIFVVQAAIGNFFTAVLSREGR 271
VY++GK+ +G+ G+ T V P + SL KN+ + A G +AV++ +G
Sbjct: 1 VYSWGKNKYGQ--LGLGHTNNVPLPTGILSLSDPLNRKNVRSIGA--GKSHSAVIAEDGD 56
Query: 272 VYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 330
VYT+ G + +LGH ++EPH ++ +EN +A G + + + +G+ +Y+
Sbjct: 57 VYTWGRGWEGQLGHDVVTEIELEPH-IVPKMENRGSSAVACGRNHTVVVT--DNGL-IYT 112
Query: 331 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 389
G G+LG G P LI+ LNL V+ +A G +H + +G + +WG +
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDS--ALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 390 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 449
G LGHGN + P V + I A G T V+++ +Y++G LG N
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLN- 229
Query: 450 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 509
VL P +V L++ V + H+ AL ++ ++Y +G D
Sbjct: 230 ------RSDKAVLQPDIVDHLRRSGACHVLCGYS-------HSMALMKNEQIYTWGRNDC 276
Query: 510 GQLGI 514
GQLG+
Sbjct: 277 GQLGL 281
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 34/372 (9%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSL------QGIRIIQAAAGAGRTMLISDAGQVY 219
VYS+G N GQLG G T P I SL + +R I AG + +I++ G VY
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSI--GAGKSHSAVIAEDGDVY 58
Query: 220 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279
+G+ G+ + V T++ P +V ++N A G T V++ G +YT+
Sbjct: 59 TWGRGWEGQLGHDVV-TEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENK 117
Query: 280 DARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 338
+LG + P L+ + N+P V+ IA G + +A+ + + ++S G G+
Sbjct: 118 AGQLGTGDLKSSNSP-VLIDSALNLPSVLSIACGEFHTVAICIEGT---IWSWGRNQCGQ 173
Query: 339 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGN 397
LGHG+ P + + + A G H V+ ++ WG YG LG + +
Sbjct: 174 LGHGNTKTCYFPTQV--VGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRS 231
Query: 398 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---CGESASLGHNAIADGQ 454
++ P +V L A HV G + + ++ +Y++G CG+ LGH
Sbjct: 232 DKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQ-LGLGH------- 283
Query: 455 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF--ALTESGKLYAFGAGDKGQL 512
+ + P+LVT+L+ V + + + + + A + +Y++G G++GQL
Sbjct: 284 ---YTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQL 340
Query: 513 G-IELVNNQTER 523
G EL++ T R
Sbjct: 341 GHNELLSRCTPR 352
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 21/276 (7%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGI-RIIQAA 203
R +S G H++ VT G++Y++G N +GQLG G + P I S + ++ A
Sbjct: 89 RGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIA 148
Query: 204 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 263
G T+ I G ++++G++ G+ +G TK P V + ++AA G T
Sbjct: 149 CGEFHTVAICIEGTIWSWGRNQCGQLGHG--NTKTCYFPTQVVGMAKKICIRAACGGQHT 206
Query: 264 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
VL+ ++Y +WG++A +LG + V ++ L + GY + +AL
Sbjct: 207 LVLTDANKIY--AWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM- 263
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-- 379
+Y+ G G+LG G T P L+ + + +Q +A G H D
Sbjct: 264 --KNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQ--IACGYDHCVAFVADEV 319
Query: 380 -------GRVCTWGWGRYGCLGHGNEECESVPKVVQ 408
V +WG G G LGH P++V+
Sbjct: 320 EPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
>gi|85001023|ref|XP_955230.1| chromosome condensation (RCC1 homologue) protein [Theileria
annulata strain Ankara]
gi|65303376|emb|CAI75754.1| chromosome condensation (RCC1 homologue) protein, putative
[Theileria annulata]
Length = 759
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 163/409 (39%), Gaps = 68/409 (16%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLQGIRIIQAAAGAG 207
Q G HS + G VY++GS G+LG G + P + SL+GI IIQ + G G
Sbjct: 279 QISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTVVESLKGIHIIQVSCGTG 338
Query: 208 RTMLISDAGQVYAFGKD-SFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
T+ +S G++Y +G F + G + T + P + KNIFV G + A
Sbjct: 339 NTLALSSTGKIYQWGSTLGFNKQTDGLISHTVYLPQPVVETGFKNIFVTS---GPYSFAA 395
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPH-----------------------PLLGTLE 302
++ G + T+ G RLGH + V P + T+E
Sbjct: 396 INIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDEAAFKVEDTVE 455
Query: 303 NIPV--------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRL 352
N + QIA G + L C + VY+ G G S E + P L
Sbjct: 456 NDSINPYDERRIQQIAVGDSHGALLTCNGT---VYTWGVNNGTGYNSSSEALENYCEPIL 512
Query: 353 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
F + +A G+ H + +G + +WG G LGHG+ VP V + +
Sbjct: 513 FNHFSS---KITKIACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIEN 569
Query: 413 VKAIH--------VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+ + + + + E G ++ FG LG N + V+TP
Sbjct: 570 CINVFAGIDNSGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGE------NMTSTVMTP 623
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ +T++ V+ + H+ ALT G LYA GAG G+LG
Sbjct: 624 REITTITGVHSLALGA---------MHSLALTHDGTLYASGAGSGGRLG 663
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 60/406 (14%)
Query: 145 RENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRP-RPIRSLQGIRIIQA 202
R N I+ G H++ T G +YS+G + G LG+G+ + P + I I I +
Sbjct: 169 RNNVVTISCGSNHTLVTTVDGCMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDDIFISKC 228
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 262
AAG+ +M + G V+++G G+ T+ +P L+E V Q + G+
Sbjct: 229 AAGSRHSMALDRQGNVWSWGYGG--NGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSH 286
Query: 263 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
+A L R G VYT+ +LG +DV ++ +L+ I ++Q++ G LAL+
Sbjct: 287 SACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTVVESLKGIHIIQVSCGTGNTLALS-- 344
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQL-LNLQPVVVAAGAWHAAVVGQD 379
S +Y G LG +TD H + Q + + + V +G + A +
Sbjct: 345 -STGKIYQ----WGSTLGFNKQTDGLISHTVYLPQPVVETGFKNIFVTSGPYSFAAINIF 399
Query: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVQAL----------------------------- 410
G + TWG G LGHG+ + +PK V L
Sbjct: 400 GDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDEAAFKVEDTVENDSI 459
Query: 411 ---NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 467
++ + +A GD +++ +G VY++G G+N+ ++ N +L
Sbjct: 460 NPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNNGT--GYNSSSEALENYCEPIL----- 512
Query: 468 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ ++ +I+ +S HT A+T +G L+++G+ + GQLG
Sbjct: 513 --FNHFSSKITKIACGSS-----HTLAITINGLLFSWGSNENGQLG 551
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 49/303 (16%)
Query: 234 QGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVL---SRE----GRVYTFSWGNDARLG 284
QG ++ TS P+++ V Q + G++ +AVL SRE G V+TF GN RLG
Sbjct: 71 QGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMNAGTVFTFGLGNSGRLG 130
Query: 285 HHTEPNDVEPHPLLGTLEN--------IP------------VVQIAAGYCYLLALACQPS 324
+H + N +GT + +P VV I+ G + L
Sbjct: 131 YHIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGSNHTLVTTVDG- 189
Query: 325 GMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 383
+YS G G G LG+GS + P ++I + + + AAG+ H+ + + G V
Sbjct: 190 --CMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDDIFISKC--AAGSRHSMALDRQGNVW 245
Query: 384 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 443
+WG+G G LG GN P +++ + + ++ GD + + G VY++G
Sbjct: 246 SWGYGGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGG 305
Query: 444 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 503
L G GN ++VL P +V SLK + ++Q+S +T AL+ +GK+Y
Sbjct: 306 KL-------GLGNILSDVLEPTVVESLKGI--HIIQVSCG-----TGNTLALSSTGKIYQ 351
Query: 504 FGA 506
+G+
Sbjct: 352 WGS 354
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQG-IRIIQAAAGA 206
++ G H++A+T G+++S+GSN +GQLGHG P + +++ I + +
Sbjct: 521 TKIACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIENCINVFAGIDNS 580
Query: 207 G-------RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
G M+ + G ++ FG + G+ G T V +P+ + ++ + + A+G
Sbjct: 581 GCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSTVMTPREITTITGVHSL--ALG 638
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
+ L+ +G +Y G+ RLG N + + V IAAG + LA+
Sbjct: 639 AMHSLALTHDGTLYASGAGSGGRLGTGDTTN---AFVFVQVKTDHKFVAIAAGSSHSLAI 695
Query: 320 ACQ 322
+ +
Sbjct: 696 SME 698
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 128/306 (41%), Gaps = 28/306 (9%)
Query: 144 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQ-GIRIIQA 202
R Q G H +T G VY++G N+ + E PI +I +
Sbjct: 464 ERRIQQIAVGDSHGALLTCNGTVYTWGVNNGTGYNSSSEALENYCEPILFNHFSSKITKI 523
Query: 203 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN-- 260
A G+ T+ I+ G ++++G + G+ +G ++V P V +++N V A I N
Sbjct: 524 ACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVV--PDSVNTIENCINVFAGIDNSG 581
Query: 261 ------FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGY 313
+ G ++ F +LG P + T+ + + + A
Sbjct: 582 CICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSTVMTPREITTITGVHSLALGA-- 639
Query: 314 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 373
+ +LA G +Y+ G G GG+LG G D + + Q + + + V +AAG+ H+
Sbjct: 640 --MHSLALTHDG-TLYASGAGSGGRLGTG---DTTNAFVFVQVKT-DHKFVAIAAGSSHS 692
Query: 374 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL----NDVKAIHVATGDYTTFVVS 429
+ + + WG G+Y L +E+ P ++ + K + VA + V+S
Sbjct: 693 LAISMENDLYGWGEGKYLTL---DEDFVLEPTIINTIPSSTGQAKIVAVAVAANHSLVLS 749
Query: 430 EDGDVY 435
+ G+V+
Sbjct: 750 QTGNVF 755
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 153/386 (39%), Gaps = 64/386 (16%)
Query: 146 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAG 205
+N +GP A+ G + ++G + +LGHG +++ P+ + L+
Sbjct: 382 KNIFVTSGPYSFAAINIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLR---------- 431
Query: 206 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 265
M I + + Y EA + V+ T S + + + Q A+G+ A+
Sbjct: 432 --TRMYIDNLLKTYD-------EAAFKVEDTVENDSINPYDERR---IQQIAVGDSHGAL 479
Query: 266 LSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQP 323
L+ G VYT WG + G+++ +E + P+L + + +IA G + LA+
Sbjct: 480 LTCNGTVYT--WGVNNGTGYNSSSEALENYCEPILFNHFSSKITKIACGSSHTLAITING 537
Query: 324 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV------- 376
++S G G+LGHG + P + + + V AG ++ +
Sbjct: 538 ---LLFSWGSNENGQLGHGDLRNRVVPDSVNTIE----NCINVFAGIDNSGCICSVSHEN 590
Query: 377 -GQDGRVCTWGWGRYGC--LGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSED 431
+D W +G C LG G +V P+ + + V ++ A G + ++ D
Sbjct: 591 MMKDEYGTLWVFGSSTCGKLGLGENMTSTVMTPREITTITGVHSL--ALGAMHSLALTHD 648
Query: 432 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 491
G +Y+ G G LG T V + + + V I+ +S H
Sbjct: 649 GTLYASGAGSGGRLGTGDT------------TNAFVFVQVKTDHKFVAIAAGSS-----H 691
Query: 492 TFALTESGKLYAFGAGDKGQLGIELV 517
+ A++ LY +G G L + V
Sbjct: 692 SLAISMENDLYGWGEGKYLTLDEDFV 717
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 381 RVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV-------SEDG 432
V +WG + CLG G E P+V+ + + V+ GDY + V+ G
Sbjct: 57 NVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMNAG 116
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ-------VNERV-VQISLTN 484
V++FG G S LG++ + ++ +L+ Q+ T K V + V + I L N
Sbjct: 117 TVFTFGLGNSGRLGYHI------DTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIGLRN 170
Query: 485 SIYW----NAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 520
++ + HT T G +Y++G G G LG V N+
Sbjct: 171 NVVTISCGSNHTLVTTVDGCMYSWGVGAYGVLGNGSVANR 210
>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
Length = 655
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 40/354 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 294 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 353
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 354 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 411
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 412 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 471
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 472 ANHTLVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 528
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 529 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 581
Query: 433 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 486
S+ G S + G D ++ + Q V +L + V + ++S+
Sbjct: 582 STISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 630
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 340 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 398
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 399 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 457
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 458 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 515
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 516 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 566
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 567 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 623
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 624 MGYSHSLVIARD 635
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 272 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 329
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 330 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 385
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 386 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 445
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 446 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 297 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 355
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 356 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 408
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 409 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 468
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 469 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 520
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 521 QIYAGYTC-----SFAVSEVGGLFFWGA 543
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 517 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 570
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 571 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSL 630
Query: 265 VLSRE 269
V++R+
Sbjct: 631 VIARD 635
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 270 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 314
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 315 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 359
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 360 GENKMGQLGL---GNQTD 374
>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
Length = 507
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 146 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 205
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 206 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 263
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 264 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 323
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 324 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 380
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 381 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 433
Query: 433 DVYSFG 438
S+G
Sbjct: 434 STISWG 439
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 192 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 250
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 251 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 309
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 310 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 367
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 368 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 418
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 419 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 475
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 476 MGYSHSLVIARD 487
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 124 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 181
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 182 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 237
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 238 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 297
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 298 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 348
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 149 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 207
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 208 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 260
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 261 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 320
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 321 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 372
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 373 QIYAGYTC-----SFAVSEVGGLFFWGA 395
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 369 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 422
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 423 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 482
Query: 265 VLSRE 269
V++R+
Sbjct: 483 VIARD 487
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 122 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 166
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 167 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 211
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 212 GENKMGQLGL---GNQTD 226
>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
Length = 521
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ P+ I L I+ AA G T+ +++
Sbjct: 160 HSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTET 219
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 220 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYSF 277
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 278 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 337
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 338 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTC 394
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 395 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 447
Query: 433 DVYSFG 438
S+G
Sbjct: 448 STISWG 453
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 206 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 264
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 265 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 323
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 324 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 381
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ L +
Sbjct: 382 GRGAAQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQ--DLCGWR 430
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+A G + +V D +WG +G LG+G+ + +S + V+ L+ + VA
Sbjct: 431 IRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVA 489
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 490 MGYAHSLVIARD 501
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 138 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-TLWSWGRNEKGQLGHGDTKRVEAPKLI 195
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 196 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 251
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 252 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 311
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 312 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 362
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG ++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 163 LITTEGTLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 221
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 222 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 274
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 275 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 334
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 335 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAA 386
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 387 QIYAGYTC-----SFAVSEVGGLFFWGA 409
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 136 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGTLWSWGRNEKGQ 180
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 181 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 225
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 226 GENKMGQLGL---GNQTD 240
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R +Q AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 383 RGAAQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLAC 436
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 437 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSL 496
Query: 265 VLSRE 269
V++R+
Sbjct: 497 VIARD 501
>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
Length = 523
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)
Query: 109 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 154
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 86 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145
Query: 155 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 146 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 205
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 263
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 297
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 264 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 323
Query: 298 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 324 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 381 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 434
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
+A G ++ +V+ D S+ G S + G D ++ + Q V +L +
Sbjct: 435 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 488
Query: 477 VVQISLTNSI 486
V + ++S+
Sbjct: 489 QVAMGYSHSL 498
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 208 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 266
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 267 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 325
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 326 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 383
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 384 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 434
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 435 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 491
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 492 MGYSHSLVIARD 503
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 140 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 197
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 313
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 314 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 364
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 223
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 388
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 389 QIYAGYTC-----SFAVSEVGGLFFWGA 411
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 385 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 438
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L IF Q A+G +
Sbjct: 439 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 498
Query: 265 VLSRE 269
V++R+
Sbjct: 499 VIARD 503
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 138 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 182
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 183 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 227
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 228 GENKMGQLGL---GNQTD 242
>gi|330837350|ref|YP_004411991.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
gi|329749253|gb|AEC02609.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
coccoides DSM 17374]
Length = 847
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 35/365 (9%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
AG H++ + G +++ G N GQLG T R P+R + + +AG TM+
Sbjct: 500 AGKSHTMILKMDGTLWATGDNYYGQLGDKTMPT--RTTPVRV--SLDVAAVSAGESHTMI 555
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIF--VVQAAIGNFFTAVLSR 268
+ G ++A G++++G+ + ++ + ++ SL + VV + G T +L +
Sbjct: 556 LKKNGTLWATGRNNYGQLGDATRISRYIPVQVKVSTSLTDFMTDVVAVSTGERHTMILKK 615
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 328
+G ++ ++G T P + + V ++AG + + L + +
Sbjct: 616 DGTLWATGDNEFGQVGDKTMTTKTTPVRM-----GLDVAAVSAGATHTMILKKDGT---L 667
Query: 329 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 388
++ G G+LG +RTD + P L+ + V+AGA H ++ +DG + G
Sbjct: 668 WATGRNYSGQLGDDTRTDRRMPVLVMS---IGSDVAAVSAGATHTMILKKDGTLWATGDN 724
Query: 389 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 448
YG LG GN E ++ P V+ + DVKA V+ G T ++ +DG +++ G E LG
Sbjct: 725 SYGQLGIGNNEDKNTP--VKVMTDVKA--VSAGVSHTMILKKDGTLWATGNNEYGQLG-- 778
Query: 449 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 508
+ D H TP+ VTS+ V ++S + T L + G L+A G
Sbjct: 779 -LGDSGSRTHR--CTPKQVTSM---GSDVAEVSAGAEL-----TMILKKDGTLWATGRNR 827
Query: 509 KGQLG 513
GQ G
Sbjct: 828 FGQRG 832
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 43/339 (12%)
Query: 197 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 256
++I +AG TM++ G ++A G + +G+ G + T+P V ++ V
Sbjct: 493 VKIKAVSAGKSHTMILKMDGTLWATGDNYYGQ--LGDKTMPTRTTPVRV----SLDVAAV 546
Query: 257 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAA 311
+ G T +L + G ++ N +LG T P V+ L VV ++
Sbjct: 547 SAGESHTMILKKNGTLWATGRNNYGQLGDATRISRYIPVQVKVSTSLTDFMT-DVVAVST 605
Query: 312 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 371
G + + L + +++ G G++G + T + P + L V+AGA
Sbjct: 606 GERHTMILKKDGT---LWATGDNEFGQVGDKTMTTKTTP------VRMGLDVAAVSAGAT 656
Query: 372 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSE 430
H ++ +DG + G G LG +P +V ++ +DV A V+ G T ++ +
Sbjct: 657 HTMILKKDGTLWATGRNYSGQLGDDTRTDRRMPVLVMSIGSDVAA--VSAGATHTMILKK 714
Query: 431 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 490
DG +++ G LG GN +++T +K V+ V +
Sbjct: 715 DGTLWATGDNSYGQLG-------IGNNEDKNTPVKVMTDVKAVSAGV------------S 755
Query: 491 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 529
HT L + G L+A G + GQLG+ ++T R P++V
Sbjct: 756 HTMILKKDGTLWATGNNEYGQLGLGDSGSRTHRCTPKQV 794
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLI 212
G H++ + G +++ G N GQ+G T + P+R G+ + +AGA TM++
Sbjct: 606 GERHTMILKKDGTLWATGDNEFGQVGDKTMTT--KTTPVR--MGLDVAAVSAGATHTMIL 661
Query: 213 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 272
G ++A G++ G+ + + + P LV S+ + V + G T +L ++G +
Sbjct: 662 KKDGTLWATGRNYSGQLGDDTRTDRRM--PVLVMSIGSD-VAAVSAGATHTMILKKDGTL 718
Query: 273 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 332
+ + +LG + P ++ V ++AG + + L + +++ G
Sbjct: 719 WATGDNSYGQLGIGNNEDKNTPVKVM-----TDVKAVSAGVSHTMILKKDGT---LWATG 770
Query: 333 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 392
G+LG G H +Q + V+AGA ++ +DG + G R+G
Sbjct: 771 NNEYGQLGLGDSGSRTHRCTPKQVTSMGSDVAEVSAGAELTMILKKDGTLWATGRNRFGQ 830
Query: 393 LGHGNEECESVP 404
G G+ ++ P
Sbjct: 831 RGDGDTSEKTTP 842
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 25/302 (8%)
Query: 153 GPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G H++ +T KG V++ G NSSGQLG +E + P + + AAG +
Sbjct: 69 GGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPD-PCVHIAAGRYHSAA 127
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ +G+ Y +G++S G+ G + + +PQ +ESL + + A+G + L+ G+
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQ 187
Query: 272 VYTFSWGND--ARLGH---------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 320
V SWG + LGH + N+ P ++ LE + V ++AG L+ A
Sbjct: 188 V--LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPR-IIHCLEKLQVRSVSAG---LVHSA 241
Query: 321 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 380
C +YS G G +LG G+ D P I ++ ++ G +H + QDG
Sbjct: 242 CADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS----SISCGGYHTGAITQDG 297
Query: 381 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 440
+ TWG +GCLG G S P +++L + ++ G T +S DG ++S+G G
Sbjct: 298 DIYTWGSNEHGCLGSGF-RASSKPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355
Query: 441 ES 442
S
Sbjct: 356 GS 357
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 33/305 (10%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE--WRPRPIRSLQGIRIIQAAAGAGRT 209
AG HS A+TS G Y +G NS GQLG G + P+ + SL G+R+ A G +
Sbjct: 120 AGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHS 179
Query: 210 MLISDAGQVYAFGKDSFGEAEYG--------VQGTKLVTSPQLVESLKNIFVVQAAIGNF 261
+ +++ GQV ++G + FG +G + T T P+++ L+ + V + G
Sbjct: 180 LGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT-PRIIHCLEKLQVRSVSAGLV 238
Query: 262 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 321
+A G +Y+F G+ +LG + +P P + ++P V + Y
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP----IPDLPRVSSISCGGYHTGAIT 294
Query: 322 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 381
Q +Y+ G G LG G R K RL + + ++ G H A + DG
Sbjct: 295 QDG--DIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSE---ISCGWKHTAAI-SDGY 348
Query: 382 VCTWGW-GRYGC-----------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 429
+ +WGW G YG LG G + P ++ + + A+HV+ G T +
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408
Query: 430 EDGDV 434
E+ ++
Sbjct: 409 EEIEI 413
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 19/288 (6%)
Query: 169 FGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 228
+G+ G+LG + ++ P R+L+ + G T++++D G+V+A G +S G+
Sbjct: 33 WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92
Query: 229 AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 288
++ ++ P V + V A G + +A ++ G Y + ++ +LG
Sbjct: 93 LGVPLK-SESSFDPVEVHGFPDP-CVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150
Query: 289 PNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--- 344
V P + +L + + +A G + L LA +G V S G G LGHG
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ETGQ-VLSWGTNRFGCLGHGEMTGF 207
Query: 345 ------TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 398
T+E PR+I + LQ V+AG H+A G + ++G G LG GN
Sbjct: 208 FDFFKDTNEYTPRIIHCLE--KLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN 265
Query: 399 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 446
S P + L V +I + G Y T +++DGD+Y++G E LG
Sbjct: 266 NDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGSNEHGCLG 311
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 242 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPH 295
P L +L++ + G T +L+ +GRV+ + +LG +P +V
Sbjct: 52 PVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGF 111
Query: 296 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLI 353
P P V IAAG + A+ S Y G G+LG G R + P+ +
Sbjct: 112 P-------DPCVHIAAGRYHSAAIT---SSGETYVWGRNSEGQLGLGKRAKSVYITPQKM 161
Query: 354 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG---------NEECESVP 404
E + L+ +A G H+ + + G+V +WG R+GCLGHG + E P
Sbjct: 162 ESLAGMRLK--ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTP 219
Query: 405 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 464
+++ L ++ V+ G + + G +YSFG G LG GN + + P
Sbjct: 220 RIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLG-------LGNNN-DASQP 271
Query: 465 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
+ L +V+ S++ Y HT A+T+ G +Y +G+ + G LG
Sbjct: 272 CPIPDLPRVS------SISCGGY---HTGAITQDGDIYTWGSNEHGCLG 311
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 265 VLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 322
V + G+ + WGN RLG + EP L LE+ ++ G + L L +
Sbjct: 21 VSGKAGKRWVALWGNGDQGRLGLSESGSQFEP-VLCRALESHEPCSVSCGGAHTLILTDK 79
Query: 323 PSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 380
V++ G G+LG +++ P + F P V +AAG +H+A + G
Sbjct: 80 GR---VFATGLNSSGQLGVPLKSESSFDPVEVHGFP----DPCVHIAAGRYHSAAITSSG 132
Query: 381 RVCTWGWGRYGCLGHGNEECESV---PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
WG G LG G + +SV P+ +++L ++ +A G + ++E G V S+
Sbjct: 133 ETYVWGRNSEGQLGLG-KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSW 191
Query: 438 GCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 496
G LGH + + N TP+++ L+++ R V L H+
Sbjct: 192 GTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLV-------HSACAD 244
Query: 497 ESGKLYAFGAGDKGQLGIELVNNQTE 522
+SG +Y+FG G QLG+ N+ ++
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQ 270
>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
Length = 564
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 69/430 (16%)
Query: 109 IFKPMTEAERQDLK-QKCGG--------SWKLVLRFLLAGEACCRRENSQAIAGP----- 154
I +P ER L+ KC G +W L+ R + + R Q + GP
Sbjct: 127 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 186
Query: 155 ---------------GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRI 199
HS+ +T++G ++S+G N GQLGHG T+ PR I L I
Sbjct: 187 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 246
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+ AA G T+ +++ G V+AFG++ G+ G Q + + Q++ + + I + A G
Sbjct: 247 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMACG 304
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL------------ 297
F+ ++ +G +Y+F +LGH+++ D E P
Sbjct: 305 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 364
Query: 298 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 356
+ + N+ V +A G + L L Q V+S G G G+LGH + DE PRL++ F
Sbjct: 365 QILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLF 421
Query: 357 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 416
+ AG + V + G + WG + + E PK VQ L +
Sbjct: 422 DFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIR 475
Query: 417 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 476
+A G ++ +V+ D S+ G S + G D ++ + Q V +L +
Sbjct: 476 SLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFSE 529
Query: 477 VVQISLTNSI 486
V + ++S+
Sbjct: 530 QVAMGYSHSL 539
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 249 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEF 307
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 308 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 366
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 367 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 424
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 425 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 475
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ + + VA
Sbjct: 476 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVA 532
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 533 MGYSHSLVIARD 544
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 181 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 238
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 239 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 294
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 295 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 354
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 355 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 405
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 206 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 264
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 265 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 317
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 318 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 377
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 378 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 429
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 430 QIYAGYTC-----SFAVSEVGGLFFWGA 452
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 130 KLVLRFLLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR 189
+LV F G R SQ AG S AV+ G ++ +G+ ++ + E P+
Sbjct: 416 RLVKLFDFPG-----RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPK 464
Query: 190 PIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 249
++ L G RI A G ++ +D + +FGE YG K T+ Q V++L
Sbjct: 465 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLD 524
Query: 250 NIFVVQAAIGNFFTAVLSRE 269
IF Q A+G + V++R+
Sbjct: 525 GIFSEQVAMGYSHSLVIARD 544
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 179 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 223
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 224 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 268
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 269 GENKMGQLGL---GNQTD 283
>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
Length = 427
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 35/306 (11%)
Query: 156 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDA 215
HS+ +T++G ++S+G N GQLGHG T+ PR I L I+ AA G T+ +++
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125
Query: 216 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 275
G V+AFG++ G+ G Q + + Q++ + + I + A G F+ ++ +G +Y+F
Sbjct: 126 GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKVACGAEFSMIMDCKGNLYSF 183
Query: 276 SWGNDARLGHHTEPN----------DVEPHPL-------------LGTLENIPVVQIAAG 312
+LGH+++ D E P + + N+ V +A G
Sbjct: 184 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 243
Query: 313 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 372
+ L L Q V+S G G G+LGH + DE PRL++ F + AG
Sbjct: 244 ANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 300
Query: 373 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 432
+ V + G + WG + + E PK VQ L + +A G ++ +V+ D
Sbjct: 301 SFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADE 353
Query: 433 DVYSFG 438
S+G
Sbjct: 354 STISWG 359
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 150 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSL-QGIRIIQAAAGAGR 208
A G H++A+T G V++FG N GQLG G + + P P + + G I + A GA
Sbjct: 112 AACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKVACGAEF 170
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE---------------------- 246
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 171 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 229
Query: 247 -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 305
+ N+ V A G T VL + RV+++ +G RLGH + +++ P L L + P
Sbjct: 230 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR--LVKLFDFP 287
Query: 306 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362
QI AGY C AV VG + SR +P+ ++ ++
Sbjct: 288 GRGASQIYAGY------TCS---FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIR 338
Query: 363 PVVVAAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVA 419
+ + +V D +WG +G LG+G+ + +S + V+ L+ V VA
Sbjct: 339 SLACGK---SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVA 395
Query: 420 TGDYTTFVVSED 431
G + V++ D
Sbjct: 396 MGYSHSLVIARD 407
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 294 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 353
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 44 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101
Query: 354 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 412
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 157
Query: 413 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 467
+ I VA G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 158 GQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217
Query: 468 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 513
+ + + + N + + HT L +++++G G G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 265 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 324
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 69 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127
Query: 325 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 382
V++ G G+LG G++TD P I + N QP+ VA GA + ++ G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKVACGAEFSMIMDCKGNL 180
Query: 383 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 418
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240
Query: 419 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 478
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292
Query: 479 QISLTNSIYWNAHTFALTESGKLYAFGA 506
QI + +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 145 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAA 204
R SQ AG S AV+ G ++ +G+ ++ + E P+ ++ L G RI A
Sbjct: 289 RGASQIYAGYTCSFAVSEVGGLFFWGATNT------SRESTMYPKAVQDLCGWRIRSLAC 342
Query: 205 GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 264
G ++ +D + +FGE YG K T+ Q V++L +F Q A+G +
Sbjct: 343 GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSL 402
Query: 265 VLSRE 269
V++R+
Sbjct: 403 VIARD 407
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)
Query: 385 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 444
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 42 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86
Query: 445 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 504
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 87 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131
Query: 505 GAGDKGQLGIELVNNQTE 522
G GQLG+ NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 154/351 (43%), Gaps = 27/351 (7%)
Query: 166 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 225
+Y +G G+LGH + + P + SL G + A G T+ ++ GQV+++G
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGP 223
Query: 226 FGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-L 283
G +G + SP +++ L+++ VV A +AV+S +G +YT WG L
Sbjct: 224 QGCLGHG--NLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYT--WGKAGPFL 279
Query: 284 GHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 342
G+ + + P L+ L +VQ+A G + L + + VYS G G+LG G
Sbjct: 280 GYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGR---VYSFGINKFGELGQG 336
Query: 343 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 402
P ++ + V+ G H+A + +DG + WGWG G LG G +
Sbjct: 337 HDKAITKPTMVPNL----VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLF 392
Query: 403 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 462
P V ND V+ G T ++ +G Y +G S+ G + G+ + ++
Sbjct: 393 SPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIV 452
Query: 463 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513
P + R QI+ + T +T G+L+ +G GQLG
Sbjct: 453 LPSGI--------RPTQINCGANF-----TVLVTSIGQLFTWGCNMSGQLG 490
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 140/317 (44%), Gaps = 27/317 (8%)
Query: 200 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 259
+Q + +L ++ +Y +G G G + K P +VESL V A G
Sbjct: 146 VQLGTIKTKVLLKDNSCDLYLWGGGDRGR--LGHKDDKPRFLPNVVESLLGQNVTMIACG 203
Query: 260 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 319
T L+ +G+V+++ G LGH + P + G L ++ VV +A CY
Sbjct: 204 GSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVA---CYENHS 260
Query: 320 ACQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 377
A +Y+ G G LG+ S T + PRL++ L + V VA G H V+
Sbjct: 261 AVISEDGNLYTWG-KAGPFLGYMDDSVTKQTKPRLVDA--LYGTRIVQVACGRSHTLVID 317
Query: 378 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 437
++GRV ++G ++G LG G+++ + P +V L V V+ G + + + EDG ++ +
Sbjct: 318 EEGRVYSFGINKFGELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMW 375
Query: 438 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 497
G G LG QG P+ + S VN Q L + HT A+T
Sbjct: 376 GWGARGQLG-------QGE-------PKSLFSPTPVNGFNDQ-PLEDVSCGYGHTAAITA 420
Query: 498 SGKLYAFGAGDKGQLGI 514
+G Y +G Q G+
Sbjct: 421 NGVAYCWGDNASSQCGV 437
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTML 211
G HS A+ GV++ +G + GQLG G + + P P+ + + G G T
Sbjct: 358 CGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAA 417
Query: 212 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 271
I+ G Y +G ++ + ++SP+ + I Q G FT +++ G+
Sbjct: 418 ITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQ 477
Query: 272 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG 312
++T+ +LG+ + +P P + +L V +A G
Sbjct: 478 LFTWGCNMSGQLGNGEAKKTFSQPMP-VESLSEKRVKMVACG 518
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 149 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGR 208
Q G H++ + +G VYSFG N G+LG G + +P + +L + I + + G
Sbjct: 305 QVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL--VSICKVSCGRHH 362
Query: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 268
+ I + G ++ +G + G+ G K + SP V + + + G TA ++
Sbjct: 363 SAAIDEDGVLFMWGWGARGQLGQG--EPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITA 420
Query: 269 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN---------IPVVQIAAGYCYLLAL 319
G Y WG++A P + G L + I QI G + + +
Sbjct: 421 NGVAYC--WGDNA------SSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLV 472
Query: 320 ACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 378
S +++ GC + G+LG+G ++ P +E ++ +VA G H
Sbjct: 473 T---SIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVK--MVACGEDH------ 521
Query: 379 DGRVCTWGWGRYGCL-GHG---NEECESVPKVVQALNDVKAIH 417
GCL GHG +EE +S ++ ++ H
Sbjct: 522 -----------IGCLVGHGWVPDEEVKSCMACKKSFTAIRRRH 553
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLQGIRIIQAAAG 205
+Q G ++ VTS G ++++G N SGQLG+G ++ + +P P+ SL R+ A G
Sbjct: 460 TQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVKMVACG 518
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,817,366,882
Number of Sequences: 23463169
Number of extensions: 383769702
Number of successful extensions: 925873
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 1963
Number of HSP's that attempted gapping in prelim test: 822197
Number of HSP's gapped (non-prelim): 37605
length of query: 534
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 387
effective length of database: 8,910,109,524
effective search space: 3448212385788
effective search space used: 3448212385788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)