Query 009469
Match_columns 534
No_of_seqs 600 out of 3092
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 13:29:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 2.6E-31 5.6E-36 262.9 26.2 287 203-491 25-321 (448)
2 TIGR01299 synapt_SV2 synaptic 100.0 4.8E-30 1E-34 281.0 34.9 183 203-388 163-358 (742)
3 COG2814 AraJ Arabinose efflux 100.0 4.5E-30 9.8E-35 257.7 31.8 267 205-492 11-278 (394)
4 KOG2532 Permease of the major 100.0 2.8E-29 6.1E-34 262.1 32.6 286 235-520 66-354 (466)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.5E-29 9.8E-34 260.7 33.7 286 204-492 5-311 (412)
6 PRK03545 putative arabinose tr 100.0 1.1E-28 2.5E-33 255.9 33.0 267 204-491 6-272 (390)
7 TIGR00894 2A0114euk Na(+)-depe 100.0 1.4E-28 2.9E-33 261.4 33.5 292 201-492 13-329 (465)
8 PRK14995 methyl viologen resis 100.0 1.7E-28 3.6E-33 262.5 34.0 287 204-493 3-328 (495)
9 PRK09556 uhpT sugar phosphate 100.0 2.3E-29 4.9E-34 267.4 27.1 288 205-494 27-328 (467)
10 PLN00028 nitrate transmembrane 100.0 2.8E-27 6E-32 251.7 37.7 279 203-491 32-319 (476)
11 PRK11663 regulatory protein Uh 100.0 5.9E-28 1.3E-32 254.2 32.0 282 205-488 21-307 (434)
12 TIGR00893 2A0114 d-galactonate 100.0 6.9E-28 1.5E-32 248.4 31.5 273 217-491 4-282 (399)
13 PRK10213 nepI ribonucleoside t 100.0 4.3E-27 9.4E-32 244.3 35.7 266 203-490 16-282 (394)
14 TIGR00710 efflux_Bcr_CflA drug 100.0 6.8E-27 1.5E-31 241.5 33.3 272 207-494 5-276 (385)
15 PRK10406 alpha-ketoglutarate t 100.0 1.8E-26 3.9E-31 242.8 35.9 272 204-494 19-313 (432)
16 PRK11551 putative 3-hydroxyphe 100.0 9.8E-27 2.1E-31 242.6 32.3 277 202-494 10-289 (406)
17 TIGR00903 2A0129 major facilit 100.0 1E-26 2.2E-31 238.7 31.7 251 219-490 3-253 (368)
18 PRK03699 putative transporter; 100.0 9.2E-27 2E-31 242.0 31.6 270 205-494 5-275 (394)
19 PRK15402 multidrug efflux syst 100.0 2.2E-26 4.8E-31 240.1 34.3 278 202-494 8-285 (406)
20 TIGR00711 efflux_EmrB drug res 100.0 6.1E-27 1.3E-31 249.8 30.4 283 208-493 3-324 (485)
21 TIGR00891 2A0112 putative sial 100.0 2.2E-26 4.8E-31 239.0 33.3 289 203-494 8-308 (405)
22 PRK10091 MFS transport protein 100.0 1.8E-26 4E-31 238.8 31.4 265 209-494 5-269 (382)
23 PRK09705 cynX putative cyanate 100.0 2E-26 4.2E-31 239.4 31.7 266 205-494 8-274 (393)
24 PF07690 MFS_1: Major Facilita 100.0 2.5E-27 5.4E-32 241.2 24.3 271 213-492 2-275 (352)
25 PRK15034 nitrate/nitrite trans 100.0 7.4E-26 1.6E-30 235.0 34.8 267 206-495 33-321 (462)
26 PRK11273 glpT sn-glycerol-3-ph 100.0 4.4E-26 9.6E-31 241.2 33.5 285 204-489 26-318 (452)
27 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-26 2.4E-31 238.4 28.0 272 206-494 3-274 (377)
28 PRK10642 proline/glycine betai 100.0 1.4E-25 3E-30 239.8 35.7 282 206-494 15-320 (490)
29 TIGR00881 2A0104 phosphoglycer 100.0 1.1E-26 2.3E-31 238.7 25.9 274 215-490 3-282 (379)
30 PRK12307 putative sialic acid 100.0 1.1E-25 2.4E-30 236.2 33.6 284 203-494 14-300 (426)
31 PRK15403 multidrug efflux syst 100.0 1.4E-25 3.1E-30 234.4 34.0 264 213-491 22-285 (413)
32 TIGR00886 2A0108 nitrite extru 100.0 6.3E-26 1.4E-30 232.8 30.6 279 211-494 5-295 (366)
33 COG2223 NarK Nitrate/nitrite t 100.0 2.9E-26 6.3E-31 227.7 26.8 275 203-494 10-288 (417)
34 PRK10473 multidrug efflux syst 100.0 2.3E-25 4.9E-30 231.3 33.1 269 209-494 5-273 (392)
35 PRK10504 putative transporter; 99.9 5.6E-25 1.2E-29 234.0 34.8 284 208-494 11-331 (471)
36 TIGR00900 2A0121 H+ Antiporter 99.9 2.6E-25 5.7E-30 227.3 30.8 272 213-493 5-280 (365)
37 TIGR00712 glpT glycerol-3-phos 99.9 3E-25 6.4E-30 234.0 31.2 286 205-491 25-318 (438)
38 PRK11102 bicyclomycin/multidru 99.9 2.5E-25 5.4E-30 229.5 29.7 261 221-495 5-265 (377)
39 PRK15075 citrate-proton sympor 99.9 7.9E-25 1.7E-29 230.5 33.6 274 204-494 12-308 (434)
40 TIGR00895 2A0115 benzoate tran 99.9 2.9E-25 6.2E-30 229.8 29.3 286 203-491 13-316 (398)
41 PRK10133 L-fucose transporter; 99.9 1E-24 2.2E-29 229.4 33.7 274 206-494 25-329 (438)
42 PRK11043 putative transporter; 99.9 2E-24 4.3E-29 224.9 35.0 258 215-493 14-271 (401)
43 TIGR00805 oat sodium-independe 99.9 1.1E-25 2.5E-30 245.6 26.0 282 210-491 36-398 (633)
44 TIGR00892 2A0113 monocarboxyla 99.9 7.1E-25 1.5E-29 232.0 31.0 278 205-487 17-303 (455)
45 TIGR00897 2A0118 polyol permea 99.9 1.7E-24 3.7E-29 225.6 33.2 273 208-493 14-290 (402)
46 PRK09952 shikimate transporter 99.9 3.2E-24 6.9E-29 226.0 34.9 278 203-494 18-320 (438)
47 PRK11652 emrD multidrug resist 99.9 3.6E-24 7.8E-29 222.5 34.9 267 205-489 6-272 (394)
48 KOG1330 Sugar transporter/spin 99.9 9.9E-27 2.1E-31 232.5 13.4 306 203-515 29-340 (493)
49 TIGR00879 SP MFS transporter, 99.9 8.9E-25 1.9E-29 231.4 27.1 288 206-495 27-354 (481)
50 TIGR00885 fucP L-fucose:H+ sym 99.9 8.9E-24 1.9E-28 220.4 32.2 270 209-493 5-302 (410)
51 KOG2533 Permease of the major 99.9 9.4E-25 2E-29 228.7 23.7 279 207-487 45-336 (495)
52 PRK03893 putative sialic acid 99.9 7.7E-24 1.7E-28 226.7 31.1 287 204-494 17-345 (496)
53 TIGR00899 2A0120 sugar efflux 99.9 1E-23 2.2E-28 217.1 30.5 261 215-494 5-269 (375)
54 PRK03633 putative MFS family t 99.9 1.5E-23 3.2E-28 216.9 31.5 262 209-494 8-269 (381)
55 PRK10077 xylE D-xylose transpo 99.9 7.2E-24 1.5E-28 225.9 29.5 289 205-496 10-342 (479)
56 TIGR00896 CynX cyanate transpo 99.9 9.6E-24 2.1E-28 216.1 27.2 248 221-491 14-263 (355)
57 PRK05122 major facilitator sup 99.9 2.3E-23 5E-28 216.8 30.3 263 206-494 14-283 (399)
58 PRK09874 drug efflux system pr 99.9 1.5E-22 3.4E-27 210.9 35.4 267 210-494 17-292 (408)
59 PRK11195 lysophospholipid tran 99.9 3.5E-23 7.5E-28 215.0 29.6 266 213-493 9-274 (393)
60 cd06174 MFS The Major Facilita 99.9 8.1E-23 1.8E-27 207.3 31.7 242 212-494 4-246 (352)
61 KOG2504 Monocarboxylate transp 99.9 2E-23 4.3E-28 220.8 26.4 285 204-492 43-365 (509)
62 PRK10489 enterobactin exporter 99.9 3.3E-23 7.2E-28 217.0 27.6 263 216-492 26-291 (417)
63 PRK12382 putative transporter; 99.9 1.3E-22 2.9E-27 210.5 31.1 258 211-494 19-283 (392)
64 TIGR00887 2A0109 phosphate:H+ 99.9 3.1E-22 6.7E-27 214.7 32.9 291 203-495 12-370 (502)
65 PRK11646 multidrug resistance 99.9 3.9E-22 8.5E-27 207.6 32.5 254 217-491 20-275 (400)
66 TIGR00902 2A0127 phenyl propri 99.9 1.9E-22 4.2E-27 208.7 29.4 263 212-493 9-273 (382)
67 TIGR00883 2A0106 metabolite-pr 99.9 2.1E-22 4.6E-27 207.9 29.7 262 217-494 3-289 (394)
68 PRK11128 putative 3-phenylprop 99.9 3.6E-22 7.8E-27 206.7 29.4 256 216-492 13-272 (382)
69 PRK10054 putative transporter; 99.9 3.2E-22 7E-27 207.9 28.3 260 215-493 15-277 (395)
70 TIGR00901 2A0125 AmpG-related 99.9 7.2E-22 1.6E-26 202.3 30.4 256 224-494 5-279 (356)
71 PRK15011 sugar efflux transpor 99.9 1.2E-21 2.7E-26 203.5 31.8 257 216-494 24-286 (393)
72 PRK11010 ampG muropeptide tran 99.9 3.4E-21 7.4E-26 205.6 34.6 269 211-494 16-293 (491)
73 PRK11902 ampG muropeptide tran 99.9 7.3E-21 1.6E-25 198.3 34.1 266 213-493 5-279 (402)
74 TIGR00898 2A0119 cation transp 99.9 2.5E-22 5.4E-27 215.6 23.0 257 228-494 110-389 (505)
75 COG0738 FucP Fucose permease [ 99.9 7.4E-21 1.6E-25 188.0 29.1 274 206-494 12-306 (422)
76 PRK08633 2-acyl-glycerophospho 99.9 3E-21 6.4E-26 227.2 30.5 264 224-494 27-303 (1146)
77 PRK06814 acylglycerophosphoeth 99.9 3.7E-21 8E-26 226.0 29.1 269 213-493 21-294 (1140)
78 TIGR00882 2A0105 oligosacchari 99.9 2.5E-20 5.3E-25 193.9 30.7 272 212-494 7-288 (396)
79 TIGR00806 rfc RFC reduced fola 99.9 3E-20 6.5E-25 189.8 29.5 300 220-531 39-362 (511)
80 PF06609 TRI12: Fungal trichot 99.9 4.3E-20 9.4E-25 195.9 31.1 271 219-494 56-383 (599)
81 KOG3764 Vesicular amine transp 99.9 3E-22 6.5E-27 196.3 12.0 240 234-492 98-338 (464)
82 COG2807 CynX Cyanate permease 99.9 1.6E-19 3.4E-24 176.1 30.0 265 206-493 11-276 (395)
83 PF05977 MFS_3: Transmembrane 99.9 8.2E-20 1.8E-24 194.2 30.3 300 212-532 15-317 (524)
84 PRK09528 lacY galactoside perm 99.9 4.7E-20 1E-24 193.3 28.0 268 216-494 19-296 (420)
85 TIGR00924 yjdL_sub1_fam amino 99.9 3.2E-19 7E-24 189.5 29.9 279 210-490 13-342 (475)
86 KOG0254 Predicted transporter 99.9 2.3E-19 4.9E-24 192.8 29.0 296 210-510 48-379 (513)
87 PRK10207 dipeptide/tripeptide 99.8 6.4E-19 1.4E-23 187.5 29.3 166 206-372 13-182 (489)
88 KOG0569 Permease of the major 99.8 2.8E-18 6E-23 177.8 29.5 252 244-497 62-342 (485)
89 PTZ00207 hypothetical protein; 99.8 5.7E-18 1.2E-22 180.9 31.2 284 203-491 24-422 (591)
90 TIGR02718 sider_RhtX_FptX side 99.8 1.3E-17 2.8E-22 173.1 32.5 269 209-494 3-278 (390)
91 TIGR00792 gph sugar (Glycoside 99.8 4.9E-19 1.1E-23 186.4 21.9 260 222-494 14-291 (437)
92 KOG2615 Permease of the major 99.8 1.3E-18 2.8E-23 169.9 18.8 253 233-488 59-325 (451)
93 TIGR00889 2A0110 nucleoside tr 99.8 3.4E-17 7.4E-22 171.4 29.4 259 214-494 9-285 (418)
94 KOG0253 Synaptic vesicle trans 99.8 1.3E-16 2.8E-21 155.0 27.9 183 202-389 73-255 (528)
95 KOG0255 Synaptic vesicle trans 99.8 1.9E-17 4.1E-22 178.6 23.3 251 234-494 110-384 (521)
96 PRK09584 tppB putative tripept 99.8 3.2E-16 6.9E-21 167.6 30.9 166 211-377 25-194 (500)
97 KOG2563 Permease of the major 99.8 2.8E-16 6E-21 157.5 26.2 285 198-493 36-334 (480)
98 PRK15462 dipeptide/tripeptide 99.7 3.2E-15 6.9E-20 157.4 32.4 171 208-379 10-184 (493)
99 PRK09669 putative symporter Ya 99.7 4.7E-16 1E-20 164.3 23.5 250 229-494 32-298 (444)
100 TIGR01301 GPH_sucrose GPH fami 99.7 2.2E-15 4.8E-20 157.9 27.6 280 206-491 4-336 (477)
101 PF13347 MFS_2: MFS/sugar tran 99.7 4.1E-16 8.9E-21 163.9 19.7 253 228-494 23-294 (428)
102 KOG4686 Predicted sugar transp 99.7 3.7E-17 8.1E-22 153.3 9.9 283 203-494 40-334 (459)
103 PRK10429 melibiose:sodium symp 99.7 1.8E-15 3.9E-20 161.1 22.9 267 217-494 16-300 (473)
104 KOG0252 Inorganic phosphate tr 99.7 1.1E-16 2.5E-21 160.0 12.6 304 203-517 37-396 (538)
105 PF03825 Nuc_H_symport: Nucleo 99.7 9.2E-14 2E-18 143.7 29.2 261 215-492 10-275 (400)
106 PRK09848 glucuronide transport 99.6 2.3E-14 5E-19 151.6 24.0 265 215-495 16-299 (448)
107 PRK11462 putative transporter; 99.6 1.1E-13 2.4E-18 146.7 29.1 259 218-493 20-296 (460)
108 PF01306 LacY_symp: LacY proto 99.6 1.1E-13 2.5E-18 141.0 26.9 292 215-526 15-316 (412)
109 KOG3626 Organic anion transpor 99.6 3.1E-14 6.7E-19 152.4 23.0 285 207-491 97-460 (735)
110 TIGR01272 gluP glucose/galacto 99.6 3E-14 6.5E-19 143.0 21.6 186 296-494 9-212 (310)
111 TIGR00788 fbt folate/biopterin 99.6 1.4E-14 3.1E-19 153.6 19.5 279 208-492 27-320 (468)
112 PF00083 Sugar_tr: Sugar (and 99.6 5.9E-19 1.3E-23 186.6 -16.3 277 215-495 8-321 (451)
113 COG2211 MelB Na+/melibiose sym 99.6 2.4E-13 5.2E-18 140.0 23.7 271 213-494 18-306 (467)
114 PF03137 OATP: Organic Anion T 99.6 2.3E-16 4.9E-21 168.6 -0.2 284 206-490 3-372 (539)
115 PF11700 ATG22: Vacuole efflux 99.6 7.4E-12 1.6E-16 132.2 33.6 244 243-494 71-353 (477)
116 TIGR00880 2_A_01_02 Multidrug 99.5 6.3E-14 1.4E-18 122.2 11.8 136 248-385 4-139 (141)
117 PF05631 DUF791: Protein of un 99.5 6.4E-12 1.4E-16 124.2 26.6 248 222-486 49-304 (354)
118 TIGR00889 2A0110 nucleoside tr 99.5 2.3E-13 5E-18 142.5 17.2 162 227-388 228-406 (418)
119 TIGR00890 2A0111 Oxalate/Forma 99.5 2.4E-13 5.3E-18 139.3 16.8 150 227-376 225-374 (377)
120 COG3104 PTR2 Dipeptide/tripept 99.5 3.2E-12 7E-17 130.7 24.3 178 207-384 21-206 (498)
121 PRK05122 major facilitator sup 99.5 1.7E-12 3.6E-17 135.1 21.7 159 226-388 235-393 (399)
122 KOG2325 Predicted transporter/ 99.5 3.2E-12 6.9E-17 132.0 23.1 255 205-467 32-305 (488)
123 PRK10642 proline/glycine betai 99.5 3.2E-12 6.9E-17 136.9 22.4 172 217-389 260-434 (490)
124 PRK15011 sugar efflux transpor 99.5 3.6E-12 7.8E-17 132.5 22.1 154 226-382 235-389 (393)
125 PF03209 PUCC: PUCC protein; 99.5 1.8E-11 4E-16 122.9 25.4 247 233-491 6-276 (403)
126 PRK09528 lacY galactoside perm 99.5 1.1E-12 2.5E-17 137.4 17.8 148 237-386 257-405 (420)
127 TIGR01299 synapt_SV2 synaptic 99.5 2.8E-12 6E-17 141.5 21.0 135 246-383 599-733 (742)
128 PRK12382 putative transporter; 99.5 4.2E-12 9.2E-17 131.8 21.2 155 225-383 234-388 (392)
129 PRK09874 drug efflux system pr 99.5 2.2E-12 4.7E-17 134.4 18.2 159 225-385 237-399 (408)
130 cd06174 MFS The Major Facilita 99.5 4.1E-12 8.9E-17 128.6 19.5 162 218-381 186-349 (352)
131 PRK11551 putative 3-hydroxyphe 99.4 4.2E-12 9.2E-17 132.3 19.5 156 225-382 238-394 (406)
132 PRK09556 uhpT sugar phosphate 99.4 5.7E-12 1.2E-16 134.0 20.8 169 215-383 266-448 (467)
133 TIGR00883 2A0106 metabolite-pr 99.4 2E-12 4.4E-17 133.2 15.6 160 215-374 227-391 (394)
134 PRK03545 putative arabinose tr 99.4 1.3E-11 2.8E-16 128.1 20.9 152 230-385 229-381 (390)
135 TIGR00899 2A0120 sugar efflux 99.4 1.3E-11 2.8E-16 126.9 20.5 147 232-381 225-371 (375)
136 PRK10489 enterobactin exporter 99.4 3.6E-12 7.7E-17 133.5 16.3 159 226-386 242-401 (417)
137 COG2270 Permeases of the major 99.4 9.5E-11 2.1E-15 117.5 25.4 244 242-494 58-322 (438)
138 PRK03893 putative sialic acid 99.4 5.6E-12 1.2E-16 135.0 17.9 151 226-376 294-445 (496)
139 TIGR00893 2A0114 d-galactonate 99.4 1.7E-11 3.7E-16 126.1 20.6 163 216-381 224-396 (399)
140 TIGR00902 2A0127 phenyl propri 99.4 1.5E-11 3.3E-16 127.3 19.9 155 221-379 219-374 (382)
141 TIGR00879 SP MFS transporter, 99.4 7.2E-12 1.6E-16 132.6 17.9 181 207-387 284-473 (481)
142 PRK03633 putative MFS family t 99.4 2.2E-11 4.7E-16 126.0 20.2 152 227-383 220-371 (381)
143 PRK03699 putative transporter; 99.4 3.2E-11 6.9E-16 125.4 20.4 158 222-382 220-378 (394)
144 PRK11273 glpT sn-glycerol-3-ph 99.4 2.8E-11 6E-16 128.3 19.8 164 222-385 268-436 (452)
145 PRK11663 regulatory protein Uh 99.4 3.4E-11 7.5E-16 126.8 19.5 167 220-386 256-426 (434)
146 PRK09705 cynX putative cyanate 99.4 9.8E-11 2.1E-15 121.7 22.3 166 221-389 219-386 (393)
147 KOG2816 Predicted transporter 99.4 4.8E-11 1E-15 124.8 19.6 278 206-491 21-309 (463)
148 TIGR00891 2A0112 putative sial 99.3 1.8E-11 3.9E-16 127.0 15.3 139 228-368 259-400 (405)
149 TIGR00897 2A0118 polyol permea 99.3 1.4E-10 3E-15 121.0 21.4 161 220-382 235-399 (402)
150 COG2271 UhpC Sugar phosphate p 99.3 2.2E-11 4.8E-16 121.8 14.5 179 208-386 253-436 (448)
151 TIGR00892 2A0113 monocarboxyla 99.3 1.9E-11 4.1E-16 129.6 14.9 155 222-378 256-415 (455)
152 PRK12307 putative sialic acid 99.3 1.1E-10 2.5E-15 122.4 20.2 144 226-369 250-393 (426)
153 PRK10077 xylE D-xylose transpo 99.3 1.5E-10 3.2E-15 123.5 21.1 167 223-389 287-462 (479)
154 PRK09952 shikimate transporter 99.3 1.4E-10 3.1E-15 122.2 20.3 159 224-382 267-431 (438)
155 PRK11010 ampG muropeptide tran 99.3 1.3E-09 2.7E-14 116.7 26.6 155 229-384 245-403 (491)
156 COG2814 AraJ Arabinose efflux 99.3 2.7E-10 5.8E-15 115.3 19.6 177 207-386 212-388 (394)
157 PRK15075 citrate-proton sympor 99.3 3.3E-10 7.1E-15 119.4 21.2 147 218-364 249-399 (434)
158 PRK11128 putative 3-phenylprop 99.3 4.2E-10 9.2E-15 116.5 20.2 147 226-376 224-371 (382)
159 PF05977 MFS_3: Transmembrane 99.2 2.9E-10 6.2E-15 121.4 17.9 153 227-381 238-391 (524)
160 TIGR00900 2A0121 H+ Antiporter 99.2 1.1E-10 2.4E-15 119.0 14.2 133 228-361 232-365 (365)
161 TIGR00895 2A0115 benzoate tran 99.2 1.7E-10 3.7E-15 119.1 15.7 140 215-356 258-397 (398)
162 PF11700 ATG22: Vacuole efflux 99.2 7.6E-10 1.6E-14 117.0 20.6 175 207-383 281-467 (477)
163 TIGR00881 2A0104 phosphoglycer 99.2 2.4E-10 5.3E-15 117.1 15.5 143 224-366 233-379 (379)
164 TIGR00882 2A0105 oligosacchari 99.2 8.3E-10 1.8E-14 114.8 19.6 142 238-381 250-392 (396)
165 TIGR00712 glpT glycerol-3-phos 99.2 4E-10 8.7E-15 118.9 17.3 163 225-387 269-436 (438)
166 PRK10504 putative transporter; 99.2 4.5E-10 9.8E-15 119.6 17.7 141 222-362 276-418 (471)
167 TIGR02718 sider_RhtX_FptX side 99.2 6.9E-10 1.5E-14 115.2 18.1 150 229-378 230-385 (390)
168 TIGR01272 gluP glucose/galacto 99.2 1.8E-09 3.9E-14 108.3 19.9 156 212-372 145-303 (310)
169 PRK10054 putative transporter; 99.2 4.9E-10 1.1E-14 116.5 16.2 152 235-388 237-388 (395)
170 PRK10406 alpha-ketoglutarate t 99.2 2E-09 4.3E-14 113.4 20.6 159 223-382 259-422 (432)
171 PF06813 Nodulin-like: Nodulin 99.2 1E-08 2.2E-13 98.4 22.7 178 205-386 1-183 (250)
172 PRK10213 nepI ribonucleoside t 99.2 4.4E-09 9.5E-14 109.4 21.7 148 229-380 239-387 (394)
173 PRK15402 multidrug efflux syst 99.1 3.7E-09 8E-14 110.3 21.1 157 228-385 236-396 (406)
174 TIGR00792 gph sugar (Glycoside 99.1 1.9E-09 4E-14 113.5 18.4 122 240-362 255-383 (437)
175 TIGR00887 2A0109 phosphate:H+ 99.1 1.3E-09 2.7E-14 117.2 17.2 165 222-387 303-491 (502)
176 TIGR00926 2A1704 Peptide:H+ sy 99.1 5.6E-08 1.2E-12 106.3 29.9 158 227-384 8-182 (654)
177 PF01770 Folate_carrier: Reduc 99.1 4.7E-08 1E-12 99.6 27.2 292 228-529 25-347 (412)
178 PF01306 LacY_symp: LacY proto 99.1 2.4E-09 5.2E-14 109.5 17.2 150 238-389 255-405 (412)
179 PF03825 Nuc_H_symport: Nucleo 99.1 5.8E-09 1.3E-13 108.1 20.3 168 218-386 218-397 (400)
180 PRK10091 MFS transport protein 99.1 5.7E-09 1.2E-13 108.0 20.1 152 229-383 222-375 (382)
181 TIGR00898 2A0119 cation transp 99.1 2.4E-09 5.2E-14 115.0 17.4 136 246-383 359-494 (505)
182 PRK11902 ampG muropeptide tran 99.1 3.6E-09 7.7E-14 110.3 17.7 148 230-382 233-388 (402)
183 PRK08633 2-acyl-glycerophospho 99.1 4.2E-09 9.2E-14 124.5 19.3 144 230-375 256-401 (1146)
184 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3E-09 6.4E-14 111.3 16.0 158 214-373 249-410 (412)
185 PF03092 BT1: BT1 family; Int 99.1 3.2E-09 7E-14 111.4 16.0 264 227-491 10-286 (433)
186 PLN00028 nitrate transmembrane 99.1 2.5E-09 5.4E-14 114.0 15.2 151 229-383 274-432 (476)
187 PRK11646 multidrug resistance 99.0 5.5E-09 1.2E-13 108.9 17.0 149 228-378 229-382 (400)
188 COG2270 Permeases of the major 99.0 6.9E-09 1.5E-13 104.3 16.3 151 227-379 273-424 (438)
189 KOG0569 Permease of the major 99.0 1E-08 2.2E-13 107.0 18.2 188 206-394 269-464 (485)
190 TIGR00896 CynX cyanate transpo 99.0 1.3E-08 2.7E-13 104.2 18.6 136 223-361 213-350 (355)
191 KOG2504 Monocarboxylate transp 99.0 5.5E-09 1.2E-13 111.1 16.1 173 210-384 301-476 (509)
192 COG2223 NarK Nitrate/nitrite t 99.0 5.5E-09 1.2E-13 105.0 14.1 173 213-386 224-403 (417)
193 PRK06814 acylglycerophosphoeth 99.0 9.1E-09 2E-13 121.6 18.5 148 228-375 246-413 (1140)
194 KOG4686 Predicted sugar transp 99.0 1.5E-08 3.3E-13 96.0 16.0 139 230-372 288-430 (459)
195 TIGR00711 efflux_EmrB drug res 99.0 7E-09 1.5E-13 110.6 15.9 134 226-359 274-410 (485)
196 PRK11195 lysophospholipid tran 99.0 3.1E-08 6.7E-13 103.0 19.5 146 232-381 231-377 (393)
197 PRK09848 glucuronide transport 99.0 1.3E-08 2.8E-13 107.7 17.0 137 226-362 247-391 (448)
198 PRK15034 nitrate/nitrite trans 99.0 2.8E-08 6.2E-13 103.9 18.9 169 217-386 262-456 (462)
199 TIGR00710 efflux_Bcr_CflA drug 99.0 1.9E-08 4.1E-13 103.7 17.3 138 227-366 226-368 (385)
200 PRK10133 L-fucose transporter; 99.0 2.8E-08 6E-13 104.9 18.6 141 234-379 287-428 (438)
201 PRK10473 multidrug efflux syst 98.9 3.8E-08 8.3E-13 102.1 18.3 134 233-373 230-363 (392)
202 PRK10429 melibiose:sodium symp 98.9 4E-08 8.6E-13 104.8 18.2 143 220-362 244-396 (473)
203 TIGR00894 2A0114euk Na(+)-depe 98.9 1.7E-08 3.7E-13 107.3 15.1 171 211-383 265-449 (465)
204 PRK14995 methyl viologen resis 98.9 2.4E-08 5.1E-13 107.2 16.1 133 226-358 278-412 (495)
205 TIGR00903 2A0129 major facilit 98.9 7E-08 1.5E-12 99.3 19.0 158 216-381 201-362 (368)
206 KOG3762 Predicted transporter 98.9 7.2E-09 1.6E-13 106.5 10.9 150 233-384 397-547 (618)
207 KOG0253 Synaptic vesicle trans 98.9 9.1E-09 2E-13 101.0 10.5 132 250-387 389-522 (528)
208 TIGR00769 AAA ADP/ATP carrier 98.9 7.3E-06 1.6E-10 86.1 32.5 279 206-493 6-336 (472)
209 PF07690 MFS_1: Major Facilita 98.9 1.4E-08 3.1E-13 102.9 11.8 129 222-350 221-352 (352)
210 TIGR00901 2A0125 AmpG-related 98.9 4.6E-08 1E-12 100.0 15.2 123 221-343 223-355 (356)
211 PF13347 MFS_2: MFS/sugar tran 98.9 1E-07 2.3E-12 100.2 18.3 147 215-362 233-387 (428)
212 COG0477 ProP Permeases of the 98.9 2.3E-06 5.1E-11 83.7 26.7 155 221-375 16-176 (338)
213 PRK09669 putative symporter Ya 98.8 2.1E-07 4.5E-12 98.4 19.9 134 229-362 251-391 (444)
214 PRK11043 putative transporter; 98.8 3.1E-07 6.7E-12 95.6 20.3 136 227-363 223-361 (401)
215 TIGR00924 yjdL_sub1_fam amino 98.8 2.8E-07 6.1E-12 98.2 20.1 176 210-385 275-469 (475)
216 PRK11102 bicyclomycin/multidru 98.8 2.5E-07 5.5E-12 95.2 18.1 123 232-355 220-345 (377)
217 PF06963 FPN1: Ferroportin1 (F 98.8 3.6E-06 7.9E-11 87.3 26.3 284 210-495 5-328 (432)
218 KOG0637 Sucrose transporter an 98.8 5.7E-07 1.2E-11 91.2 19.3 283 207-496 32-368 (498)
219 COG2807 CynX Cyanate permease 98.7 1.5E-06 3.2E-11 85.9 19.7 175 203-384 208-385 (395)
220 KOG3764 Vesicular amine transp 98.7 4.9E-08 1.1E-12 97.1 7.9 162 220-383 283-453 (464)
221 PRK11652 emrD multidrug resist 98.7 1E-06 2.2E-11 91.5 18.2 128 232-360 233-361 (394)
222 TIGR00885 fucP L-fucose:H+ sym 98.6 1.2E-06 2.6E-11 91.6 17.9 143 226-373 251-401 (410)
223 TIGR00788 fbt folate/biopterin 98.6 3.1E-07 6.8E-12 97.6 13.2 128 234-361 280-415 (468)
224 PRK11462 putative transporter; 98.6 4.7E-06 1E-10 88.5 21.0 136 227-362 248-390 (460)
225 COG2211 MelB Na+/melibiose sym 98.6 2.5E-06 5.4E-11 88.6 17.1 148 215-362 244-399 (467)
226 KOG3098 Uncharacterized conser 98.6 1.5E-05 3.2E-10 82.8 22.5 233 247-490 55-309 (461)
227 TIGR00886 2A0108 nitrite extru 98.5 6E-07 1.3E-11 91.9 11.3 119 226-345 244-365 (366)
228 PRK09584 tppB putative tripept 98.5 2.5E-06 5.4E-11 91.6 15.6 139 244-382 318-477 (500)
229 KOG4332 Predicted sugar transp 98.5 2.6E-06 5.5E-11 80.4 13.4 244 222-488 52-310 (454)
230 PF05978 UNC-93: Ion channel r 98.4 1.1E-05 2.4E-10 71.7 16.0 115 240-357 35-149 (156)
231 PF03209 PUCC: PUCC protein; 98.4 1.9E-05 4E-10 80.0 19.4 161 221-381 222-395 (403)
232 COG0738 FucP Fucose permease [ 98.4 8.4E-06 1.8E-10 81.9 16.6 161 212-377 241-402 (422)
233 PRK15403 multidrug efflux syst 98.4 2.5E-05 5.5E-10 81.8 20.9 156 224-381 235-394 (413)
234 PRK10207 dipeptide/tripeptide 98.4 1.4E-05 3E-10 85.5 18.9 139 244-382 311-474 (489)
235 KOG2532 Permease of the major 98.4 3.5E-06 7.7E-11 88.8 13.2 177 208-386 259-449 (466)
236 PF00083 Sugar_tr: Sugar (and 98.3 5.2E-09 1.1E-13 110.7 -10.6 165 224-391 270-443 (451)
237 KOG0252 Inorganic phosphate tr 98.3 6.6E-07 1.4E-11 90.7 4.3 178 207-384 304-498 (538)
238 KOG0254 Predicted transporter 98.2 3.8E-05 8.2E-10 82.8 17.3 181 209-390 297-489 (513)
239 TIGR01301 GPH_sucrose GPH fami 98.2 9.9E-05 2.2E-09 78.0 19.5 181 208-388 259-475 (477)
240 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0031 6.6E-08 66.9 30.4 284 206-494 23-353 (491)
241 KOG3574 Acetyl-CoA transporter 98.2 0.00016 3.4E-09 72.0 18.6 263 206-487 30-323 (510)
242 PF02487 CLN3: CLN3 protein; 98.1 0.00054 1.2E-08 70.2 22.4 134 245-386 62-197 (402)
243 PF06779 DUF1228: Protein of u 98.1 1.7E-05 3.6E-10 62.2 8.3 75 219-293 4-78 (85)
244 COG3202 ATP/ADP translocase [E 98.0 0.024 5.1E-07 58.9 32.0 286 200-492 20-354 (509)
245 PF12832 MFS_1_like: MFS_1 lik 98.0 3.7E-05 8E-10 59.7 9.0 69 214-282 7-75 (77)
246 PF06609 TRI12: Fungal trichot 97.9 0.00018 3.9E-09 77.5 14.8 151 208-358 311-466 (599)
247 PRK15462 dipeptide/tripeptide 97.9 0.00077 1.7E-08 71.6 18.7 172 205-376 266-469 (493)
248 KOG2615 Permease of the major 97.9 0.00017 3.7E-09 71.9 12.6 140 234-375 289-431 (451)
249 PF12832 MFS_1_like: MFS_1 lik 97.9 0.00015 3.3E-09 56.2 9.6 66 427-493 3-68 (77)
250 KOG3810 Micronutrient transpor 97.8 0.00024 5.2E-09 69.9 12.4 280 236-526 35-330 (433)
251 KOG2533 Permease of the major 97.8 0.00015 3.2E-09 76.9 11.7 162 210-373 276-445 (495)
252 KOG3097 Predicted membrane pro 97.7 0.0058 1.3E-07 59.9 19.9 72 252-326 68-139 (390)
253 KOG0255 Synaptic vesicle trans 97.7 0.0024 5.2E-08 69.0 19.8 154 231-388 342-496 (521)
254 PTZ00207 hypothetical protein; 97.7 0.00058 1.3E-08 73.9 14.3 171 212-385 358-553 (591)
255 PF00854 PTR2: POT family; In 97.6 0.00026 5.6E-09 73.0 10.0 111 273-383 2-122 (372)
256 KOG2816 Predicted transporter 97.6 0.00057 1.2E-08 72.0 12.3 125 231-358 266-391 (463)
257 KOG1237 H+/oligopeptide sympor 97.5 0.0033 7.1E-08 68.0 16.0 179 204-382 34-243 (571)
258 PRK03612 spermidine synthase; 97.4 0.0096 2.1E-07 64.0 19.1 144 234-379 42-192 (521)
259 KOG3762 Predicted transporter 97.4 0.0012 2.7E-08 68.8 11.4 79 215-293 19-98 (618)
260 COG3104 PTR2 Dipeptide/tripept 97.3 0.011 2.4E-07 61.5 16.2 142 242-383 324-486 (498)
261 PF02487 CLN3: CLN3 protein; 96.9 0.01 2.2E-07 60.9 12.4 112 240-357 279-395 (402)
262 KOG1479 Nucleoside transporter 96.8 0.086 1.9E-06 53.9 17.1 138 208-351 19-166 (406)
263 KOG2563 Permease of the major 96.7 0.0059 1.3E-07 62.6 7.9 165 221-385 280-451 (480)
264 TIGR00939 2a57 Equilibrative N 96.5 0.17 3.6E-06 53.3 18.3 51 297-352 106-156 (437)
265 PF13000 Acatn: Acetyl-coenzym 96.5 0.07 1.5E-06 55.7 14.2 270 211-487 4-336 (544)
266 KOG3098 Uncharacterized conser 96.5 0.17 3.7E-06 53.0 17.4 140 216-356 249-411 (461)
267 KOG2325 Predicted transporter/ 96.4 0.013 2.9E-07 61.4 9.1 181 205-385 260-476 (488)
268 PF06963 FPN1: Ferroportin1 (F 96.2 0.16 3.4E-06 53.2 15.8 130 225-354 276-413 (432)
269 PF03092 BT1: BT1 family; Int 96.2 0.037 8E-07 58.3 11.0 123 239-361 252-382 (433)
270 TIGR00805 oat sodium-independe 96.2 0.022 4.9E-07 62.9 9.7 145 215-359 338-581 (633)
271 TIGR00939 2a57 Equilibrative N 96.2 0.052 1.1E-06 57.1 11.8 111 245-356 310-431 (437)
272 TIGR00806 rfc RFC reduced fola 96.1 0.034 7.3E-07 58.3 9.8 51 445-495 46-97 (511)
273 KOG1330 Sugar transporter/spin 95.8 0.028 6.1E-07 58.0 7.4 126 237-363 278-417 (493)
274 PF06779 DUF1228: Protein of u 95.4 0.16 3.4E-06 40.0 8.7 53 438-491 6-58 (85)
275 PF07672 MFS_Mycoplasma: Mycop 95.1 0.075 1.6E-06 50.9 7.5 101 329-437 2-107 (267)
276 PF05631 DUF791: Protein of un 95.0 0.48 1E-05 47.7 13.0 39 454-492 63-101 (354)
277 TIGR00880 2_A_01_02 Multidrug 94.2 1.1 2.4E-05 37.7 12.4 112 340-491 5-118 (141)
278 KOG4830 Predicted sugar transp 93.7 0.011 2.3E-07 56.1 -1.5 65 415-479 192-256 (412)
279 PF03137 OATP: Organic Anion T 93.5 0.021 4.6E-07 61.7 0.0 147 213-359 311-514 (539)
280 PF06813 Nodulin-like: Nodulin 92.3 0.76 1.6E-05 44.3 8.9 55 439-495 17-71 (250)
281 PF01770 Folate_carrier: Reduc 92.1 4 8.7E-05 42.3 14.2 99 240-340 283-383 (412)
282 PF01733 Nucleoside_tran: Nucl 92.0 0.055 1.2E-06 54.2 0.6 109 246-355 186-306 (309)
283 TIGR00769 AAA ADP/ATP carrier 91.3 18 0.00038 38.5 18.5 74 303-376 272-346 (472)
284 COG4262 Predicted spermidine s 90.7 20 0.00044 36.1 18.5 150 231-382 31-189 (508)
285 KOG3880 Predicted small molecu 88.6 1.7 3.7E-05 42.8 7.4 136 245-387 65-202 (409)
286 TIGR00844 c_cpa1 na(+)/h(+) an 87.4 56 0.0012 36.9 24.8 33 341-373 109-141 (810)
287 KOG0637 Sucrose transporter an 85.5 3.7 8E-05 42.8 8.3 115 245-361 335-472 (498)
288 KOG3810 Micronutrient transpor 83.2 15 0.00033 37.0 11.1 96 245-340 274-369 (433)
289 PRK00293 dipZ thiol:disulfide 82.4 81 0.0018 34.5 22.3 30 458-487 323-352 (571)
290 PF13000 Acatn: Acetyl-coenzym 82.1 11 0.00024 39.9 10.2 64 300-363 408-471 (544)
291 PF06912 DUF1275: Protein of u 81.8 45 0.00097 31.0 17.7 50 324-374 153-202 (209)
292 KOG2881 Predicted membrane pro 81.1 54 0.0012 31.5 13.7 24 361-384 128-151 (294)
293 TIGR00926 2A1704 Peptide:H+ sy 79.8 3.9 8.5E-05 45.4 6.5 56 439-494 2-58 (654)
294 PRK10263 DNA translocase FtsK; 78.9 14 0.00031 43.5 10.6 23 344-366 142-164 (1355)
295 KOG3880 Predicted small molecu 78.3 4.3 9.3E-05 40.1 5.4 76 279-356 326-401 (409)
296 PF02990 EMP70: Endomembrane p 77.5 19 0.00041 38.9 10.8 28 465-492 302-329 (521)
297 KOG1479 Nucleoside transporter 76.7 8.5 0.00018 39.7 7.3 108 244-353 284-399 (406)
298 PF07672 MFS_Mycoplasma: Mycop 74.9 13 0.00028 35.9 7.5 100 245-344 144-253 (267)
299 KOG2601 Iron transporter [Inor 72.3 75 0.0016 32.6 12.3 166 210-375 30-217 (503)
300 PF07857 DUF1632: CEO family ( 71.8 99 0.0022 29.9 14.7 25 430-454 184-208 (254)
301 PF01733 Nucleoside_tran: Nucl 70.5 1.4 3E-05 44.1 0.0 21 464-484 186-206 (309)
302 COG1230 CzcD Co/Zn/Cd efflux s 70.3 1.1E+02 0.0024 30.3 12.9 43 330-372 152-194 (296)
303 PF03219 TLC: TLC ATP/ADP tran 69.8 1.6E+02 0.0035 31.5 19.3 76 303-378 288-364 (491)
304 PF05978 UNC-93: Ion channel r 69.5 55 0.0012 29.0 9.9 32 461-492 38-69 (156)
305 PRK15015 carbon starvation pro 64.2 1.6E+02 0.0035 32.5 13.7 40 324-368 79-120 (701)
306 COG5336 Uncharacterized protei 63.9 32 0.0007 28.1 6.4 29 251-279 51-80 (116)
307 TIGR00927 2A1904 K+-dependent 62.8 97 0.0021 35.6 12.0 50 224-275 950-999 (1096)
308 PF03741 TerC: Integral membra 56.6 1.6E+02 0.0034 26.9 18.7 60 313-374 12-71 (183)
309 COG0477 ProP Permeases of the 56.5 67 0.0015 30.2 9.1 56 438-494 16-73 (338)
310 KOG3814 Signaling protein van 56.2 2.4E+02 0.0051 28.8 12.5 12 296-307 204-215 (531)
311 COG1288 Predicted membrane pro 55.3 2.7E+02 0.0058 29.2 13.3 39 345-383 200-239 (481)
312 KOG3626 Organic anion transpor 55.3 17 0.00037 40.5 4.9 71 211-281 396-470 (735)
313 COG5336 Uncharacterized protei 55.2 51 0.0011 27.0 6.2 55 328-382 37-93 (116)
314 PF11299 DUF3100: Protein of u 54.0 22 0.00047 33.5 4.6 52 301-353 175-226 (241)
315 KOG1237 H+/oligopeptide sympor 52.0 1.8E+02 0.0039 31.8 12.1 65 296-360 457-521 (571)
316 PRK11588 hypothetical protein; 51.9 3.3E+02 0.0072 29.2 16.7 32 262-293 136-169 (506)
317 PF02554 CstA: Carbon starvati 49.8 3E+02 0.0066 28.1 14.3 35 324-363 48-83 (376)
318 KOG2601 Iron transporter [Inor 48.7 1.4E+02 0.0031 30.7 9.6 74 423-496 26-99 (503)
319 COG3559 TnrB3 Putative exporte 48.5 3.4E+02 0.0074 28.3 17.1 26 311-336 175-200 (536)
320 PF02535 Zip: ZIP Zinc transpo 47.7 2.9E+02 0.0062 27.2 13.5 31 300-330 263-294 (317)
321 PF01925 TauE: Sulfite exporte 47.4 1.8E+02 0.004 27.3 10.3 26 466-491 199-224 (240)
322 PF05255 UPF0220: Uncharacteri 47.4 97 0.0021 27.8 7.5 58 325-382 14-77 (166)
323 PF03596 Cad: Cadmium resistan 46.0 67 0.0015 29.6 6.5 30 350-379 43-72 (191)
324 KOG1307 K+-dependent Ca2+/Na+ 46.0 3.4E+02 0.0074 28.6 11.9 47 223-271 440-486 (588)
325 PF12805 FUSC-like: FUSC-like 45.0 98 0.0021 30.4 8.1 15 278-292 5-19 (284)
326 PRK10263 DNA translocase FtsK; 44.9 1.6E+02 0.0035 35.3 10.6 22 470-491 141-162 (1355)
327 PRK13629 threonine/serine tran 44.0 4.1E+02 0.0089 28.0 17.2 41 327-372 18-58 (443)
328 PF07760 DUF1616: Protein of u 43.8 2.5E+02 0.0054 27.6 10.7 61 300-362 22-82 (287)
329 PF11947 DUF3464: Protein of u 43.5 56 0.0012 28.8 5.3 50 296-348 96-145 (153)
330 COG0861 TerC Membrane protein 43.1 3.2E+02 0.0069 26.4 22.3 63 309-373 28-90 (254)
331 KOG3574 Acetyl-CoA transporter 42.9 1.4E+02 0.0031 30.8 8.6 135 229-365 287-437 (510)
332 PF02694 UPF0060: Uncharacteri 42.9 55 0.0012 26.8 4.7 53 241-293 53-105 (107)
333 KOG4332 Predicted sugar transp 42.8 3.4E+02 0.0074 26.7 14.5 54 304-361 254-310 (454)
334 COG1480 Predicted membrane-ass 39.0 4.9E+02 0.011 28.9 12.4 17 359-375 271-287 (700)
335 PRK02237 hypothetical protein; 38.5 90 0.002 25.7 5.3 52 242-293 56-107 (109)
336 PRK03612 spermidine synthase; 38.3 5.5E+02 0.012 27.8 20.1 32 460-491 145-177 (521)
337 PF11368 DUF3169: Protein of u 37.0 3.8E+02 0.0083 25.6 12.3 24 333-356 10-33 (248)
338 COG4769 Predicted membrane pro 36.8 1.4E+02 0.0031 26.6 6.6 53 250-310 81-133 (181)
339 PF04226 Transgly_assoc: Trans 36.7 1.4E+02 0.0031 20.5 5.8 39 344-382 6-44 (48)
340 PF03547 Mem_trans: Membrane t 35.5 4.9E+02 0.011 26.5 17.1 20 418-437 239-258 (385)
341 PRK10692 hypothetical protein; 34.2 77 0.0017 24.8 4.1 17 296-312 37-53 (92)
342 PF09930 DUF2162: Predicted tr 32.7 4.4E+02 0.0094 25.0 14.8 52 453-507 124-175 (224)
343 PF06570 DUF1129: Protein of u 32.4 4.1E+02 0.0089 24.6 11.1 26 360-385 174-199 (206)
344 PF01810 LysE: LysE type trans 31.8 3.8E+02 0.0083 24.1 16.6 8 482-489 159-166 (191)
345 COG2962 RarD Predicted permeas 31.7 3E+02 0.0065 27.1 8.6 65 418-491 63-128 (293)
346 PF02632 BioY: BioY family; I 31.4 1.7E+02 0.0038 25.6 6.6 25 249-273 60-84 (148)
347 PF06123 CreD: Inner membrane 31.0 6.5E+02 0.014 26.5 12.1 75 257-337 306-385 (430)
348 KOG2765 Predicted membrane pro 30.9 4.1E+02 0.0089 27.2 9.6 13 266-278 208-220 (416)
349 PF12273 RCR: Chitin synthesis 30.9 26 0.00055 30.0 1.2 15 363-377 1-15 (130)
350 COG1268 BioY Uncharacterized c 30.3 1.7E+02 0.0036 26.8 6.4 24 248-271 88-111 (184)
351 PF02447 GntP_permease: GntP f 30.0 6.8E+02 0.015 26.4 15.6 52 296-352 24-75 (441)
352 PF10762 DUF2583: Protein of u 29.8 86 0.0019 24.4 3.7 19 295-313 36-54 (89)
353 PRK03818 putative transporter; 28.8 3.8E+02 0.0082 29.3 10.0 89 243-337 436-529 (552)
354 TIGR01666 YCCS hypothetical me 27.6 3.7E+02 0.008 30.3 9.8 49 261-310 42-94 (704)
355 COG2119 Predicted membrane pro 27.1 4.9E+02 0.011 23.8 14.3 26 467-492 141-166 (190)
356 TIGR02230 ATPase_gene1 F0F1-AT 26.7 3E+02 0.0066 22.4 6.6 25 257-281 57-82 (100)
357 TIGR03173 pbuX xanthine permea 25.9 7.5E+02 0.016 25.6 13.1 97 234-332 20-116 (406)
358 PF11833 DUF3353: Protein of u 25.8 5.3E+02 0.012 23.8 9.3 31 328-358 136-166 (194)
359 PF06638 Strabismus: Strabismu 25.2 4.9E+02 0.011 27.7 9.4 11 296-306 180-190 (505)
360 TIGR03644 marine_trans_1 proba 25.0 8E+02 0.017 25.6 11.2 174 330-534 123-305 (404)
361 PF05297 Herpes_LMP1: Herpesvi 24.6 25 0.00054 34.0 0.0 30 463-492 108-137 (381)
362 TIGR01667 YCCS_YHJK integral m 24.5 4.2E+02 0.0092 29.9 9.6 51 260-311 41-95 (701)
363 COG1457 CodB Purine-cytosine p 24.4 8.6E+02 0.019 25.7 15.2 68 421-490 91-158 (442)
364 PRK11715 inner membrane protei 24.2 8.6E+02 0.019 25.6 11.9 76 257-338 312-392 (436)
365 COG2119 Predicted membrane pro 24.1 5.6E+02 0.012 23.4 9.7 77 208-286 101-178 (190)
366 PF03547 Mem_trans: Membrane t 24.1 7.7E+02 0.017 25.0 12.4 19 312-330 345-363 (385)
367 TIGR03802 Asp_Ala_antiprt aspa 23.9 5.1E+02 0.011 28.3 9.9 81 243-330 451-535 (562)
368 PRK02237 hypothetical protein; 23.6 4.2E+02 0.0092 21.9 6.9 36 461-496 57-92 (109)
369 PF03606 DcuC: C4-dicarboxylat 23.5 9E+02 0.02 25.6 15.2 11 263-273 105-115 (465)
370 COG1138 CcmF Cytochrome c biog 23.3 1E+03 0.023 26.3 20.6 109 243-358 177-294 (648)
371 TIGR02230 ATPase_gene1 F0F1-AT 23.3 4.1E+02 0.0089 21.6 7.1 17 345-361 55-71 (100)
372 PRK10599 calcium/sodium:proton 22.8 7.9E+02 0.017 25.2 10.3 29 220-248 235-263 (366)
373 COG2233 UraA Xanthine/uracil p 22.5 9.3E+02 0.02 25.5 12.6 101 233-334 40-142 (451)
374 PF03706 UPF0104: Uncharacteri 22.3 7E+02 0.015 23.9 17.6 50 238-287 23-72 (294)
375 COG3619 Predicted membrane pro 22.3 6.8E+02 0.015 23.7 20.4 31 241-271 54-84 (226)
376 PRK04972 putative transporter; 21.7 7E+02 0.015 27.3 10.4 43 242-286 62-104 (558)
377 KOG1277 Endosomal membrane pro 21.7 1.8E+02 0.004 30.4 5.4 26 467-492 334-359 (593)
378 KOG4830 Predicted sugar transp 21.6 1.5E+02 0.0031 29.0 4.4 95 234-329 229-325 (412)
379 PF06826 Asp-Al_Ex: Predicted 21.5 6E+02 0.013 22.8 10.2 80 242-326 56-137 (169)
380 PF06570 DUF1129: Protein of u 21.5 6.5E+02 0.014 23.2 10.8 29 425-453 77-105 (206)
381 PF06123 CreD: Inner membrane 21.3 8.8E+02 0.019 25.5 10.5 73 302-383 326-398 (430)
382 PF09527 ATPase_gene1: Putativ 21.2 3E+02 0.0065 19.2 7.0 34 249-282 7-41 (55)
383 PRK04972 putative transporter; 20.3 7.4E+02 0.016 27.1 10.2 96 242-344 445-544 (558)
384 PRK11715 inner membrane protei 20.3 8.8E+02 0.019 25.5 10.3 73 302-383 332-404 (436)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-31 Score=262.92 Aligned_cols=287 Identities=20% Similarity=0.299 Sum_probs=254.8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+.||.+++..++.+...++.+..++.+.|.+.++.++|.+++|++.+.+.+.+.++-.+.|.++||.+.|..+.+|+++.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLils 104 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHH
Confidence 44567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHH--HHhhccc
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS--PILIQKF 360 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~--~~l~~~~ 360 (534)
++..+++++++ +.+.+.++-++.|...|..+|++...+++|++++|||+..++++..-++|+.+.|++. +++..+.
T Consensus 105 ai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 105 AIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999 8899999999999999999999999999999999999999999999999999999999 8999889
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCC--Cccc----cccccccHHHhhcchhHHHHHHHHH
Q 009469 361 GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGG--SISK----EAVSVIPWKLILSKAPVWALIISHF 434 (534)
Q Consensus 361 gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~ll~~~~~~~~~l~~~ 434 (534)
+||..|++.+++++++.++.++..+++|+...-.+.++......+ .++. -.....-++.+++||.+|.++++.+
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~v 262 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANV 262 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHH
Confidence 999999999999999999999999988875433332222211111 1111 1112345677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--hccc
Q 009469 435 CHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL--VSKG 491 (534)
Q Consensus 435 ~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~--g~r~ 491 (534)
+.+..-+++..|.|.|+.|..|++...+....+.+=.+++.|.++.||++||+ |||.
T Consensus 263 fvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~ 321 (448)
T COG2271 263 FVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG 321 (448)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999998 4555
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.98 E-value=4.8e-30 Score=280.98 Aligned_cols=183 Identities=16% Similarity=0.261 Sum_probs=160.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+..|.++++++++.+..+++...++.++|.+.++++++..+.+++.+++.++.+++.+++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888888888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc--
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-- 360 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-- 360 (534)
+++.+++++++ +++.++++|++.|++.++..+...++++|++|+++|++.++++.++..+|.++++.++..+...+
T Consensus 243 ~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 243 GFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999888 78999999999999999999999999999999999999999999999999999999887776533
Q ss_pred -----------CchHHHHHHHHHHHHHHHHHHHhhcCCC
Q 009469 361 -----------GWPSVFYSFGSLGSIWFALWLKKAYSSP 388 (534)
Q Consensus 361 -----------gw~~~f~i~~~~~~i~~i~~~~~~~~~~ 388 (534)
+||+.+++.++..++.+ +..++.|+.|
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESP 358 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESP 358 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCH
Confidence 58888877666554443 4444455554
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=4.5e-30 Score=257.67 Aligned_cols=267 Identities=19% Similarity=0.303 Sum_probs=243.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
.|..++.+.+..|............+|++.+++|+|....|++.++|.++..++.|+...+.||+.||++++..+.++.+
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHH
Confidence 36777888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 009469 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~ 364 (534)
+.+++++++ |++.++++|++.|+..|.+++...++..++.|+++|++++++...+..++.++|.+++.++.+.+|||+
T Consensus 91 ~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 91 SNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAY-SSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
+|++.+.+.++.++..+...| +..++.+.... .+..+++++|.++...+..++...+.+..
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~------------------~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ 230 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLPPSEISGSLPGPL------------------RTLLRLLRRPGVLLGLLATFLFMTGHFAL 230 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccCCCCCCcch------------------hHHHHHhcCchHHHHHHHHHHHHcchhhh
Confidence 999999999999888888877 11111111111 12334789999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
++|+..++++..|++....++++..+++++++|.+++|++.|| +.++.
T Consensus 231 ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~ 278 (394)
T COG2814 231 YTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRA 278 (394)
T ss_pred HHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhH
Confidence 9999999999999999999999999999999999999999999 66653
No 4
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.8e-29 Score=262.06 Aligned_cols=286 Identities=43% Similarity=0.821 Sum_probs=263.0
Q ss_pred hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccch
Q 009469 235 KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVA 314 (534)
Q Consensus 235 ~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~ 314 (534)
.+++++..+.+++.+.+.+|+.+++++.|+++||+|.|+++.++.++.+++.+++..+...+++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 36888999999999999999999999999999999999999999999999999999987667778899999999999999
Q ss_pred hhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChh
Q 009469 315 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE 393 (534)
Q Consensus 315 ~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~ 393 (534)
+++...+.++|.|++||++..++..++..+|.+++-+++|++.+. +||+++|++.+++.++..++++.+..+.|.+.+.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999988888776
Q ss_pred hhHHHHhhhhCCCcccccc--ccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHH
Q 009469 394 LRAEEKRHILGGSISKEAV--SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWL 471 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~ 471 (534)
...+|.+.+..+..+.+.. ...||+.+++++++|.+.+..++..++.+.+..|+|.|+++.+|++..+.|++.+++.+
T Consensus 226 is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 226 ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHH
Confidence 6666666555444433333 47899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 472 TMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVR 520 (534)
Q Consensus 472 ~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~ 520 (534)
...+..+++|.++||+.+|.+..+..++++-.++..+.++.+..+++.+
T Consensus 306 ~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 306 AMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred HHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 9999999999999999887677788888999999999999998887766
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=4.5e-29 Score=260.74 Aligned_cols=286 Identities=20% Similarity=0.287 Sum_probs=236.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
.+|..++.+++.+++.+++....+.+.|.+.+++|++..++|++.+++.+++.+++++.|+++||+|||+++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 46888888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-----
Q 009469 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----- 358 (534)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~----- 358 (534)
++.+++++++ +++.+++.|++.|++.+...+....++.|++|+++|+++++++..+..+|.++++++++++.+
T Consensus 85 ~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 85 IASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988 889999999999999999999999999999999999999999999999999999999998864
Q ss_pred -ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCCh---hhhHHHHhhhh--CC-C---cc----ccc-cccccHHHhhcc
Q 009469 359 -KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP---ELRAEEKRHIL--GG-S---IS----KEA-VSVIPWKLILSK 423 (534)
Q Consensus 359 -~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~---~~~~~~~~~~~--~~-~---~~----~~~-~~~~~~~~ll~~ 423 (534)
..|||++|++.+++.++..++.+++.++.|+..+ +.+.+...+.. .. . .+ ... .....++.++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 3699999999888887766666666666654321 11111100000 00 0 00 000 0012344444 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 424 APVWALIISHFCHNWGTFILLTWMPTYYNQV-LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~-~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
+.+|...+..++....++.+.+|+|.|+++. .|++..+++.+.....++.++++++.|+++||+++|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 7788888888888888999999999999873 36788889999999999999999999999999997764
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=1.1e-28 Score=255.93 Aligned_cols=267 Identities=16% Similarity=0.221 Sum_probs=222.8
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
++|..+..+.+..+..........+++|.+.+++|.+..++|++.+.+.+++.++++++|++.||+|||+++..+.++++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34655555455445544444455667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
++.+++++++ +++.+++.|+++|++.+...+...+++.+++|+++|++++|++..+..+|.+++|++++.+.+.+|||
T Consensus 86 ~~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 9999999988 89999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
++|++.+++.++..++.+...++.+++++. ...+.+++++++.++...+..++.....+..
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPSEHSG-------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCcc-------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 999999888777665555544433221110 0113456788888887766666666666667
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
..+++.|+++..|++..+++.+.....++.++++++.|++.||+++|.
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 788888888878999999999999999999999999999999998774
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=1.4e-28 Score=261.42 Aligned_cols=292 Identities=32% Similarity=0.539 Sum_probs=244.5
Q ss_pred cCCchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHh----------------------hhCCCcchhHHHHHHHHHHHHHH
Q 009469 201 QFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSK----------------------EFNWNSTTVGLIQSSFFWGYLLT 258 (534)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~g~i~s~~~l~~~~~ 258 (534)
..+.+|.++.++++...+.+.+...++.+.+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 34567888888888888889999999988887766 78999999999999999999999
Q ss_pred HHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHH
Q 009469 259 QIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFV 338 (534)
Q Consensus 259 ~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~ 338 (534)
+++.|+++||+|+|+++.++.++++++.+++.++...+++.+++.|+++|++.+...+....++++++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999888876553225778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCC--Cccccccccc
Q 009469 339 YSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGG--SISKEAVSVI 415 (534)
Q Consensus 339 ~~~~~lG~~igp~i~~~l~~~-~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 415 (534)
..+..+|.+++|++++.+.+. .|||+.|++.+++.++..++++...++.|+..+...+++.+...+. ....+.....
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSL 252 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCC
Confidence 999999999999999999988 4999999999988877777776666655543322222221111111 0111111234
Q ss_pred cHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 416 PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 416 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
+++++++++.+|...+..++..++.+.+.+|+|.|+++.+|++..+++++.++..++.+++.++.|+++||+++|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~ 329 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKT 329 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 68899999999999999999999999999999999999899999999999999999999999999999999876653
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1.7e-28 Score=262.50 Aligned_cols=287 Identities=15% Similarity=0.188 Sum_probs=239.1
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
++|..++.+++..++...+.++++.++|.+.+++|.+..+++|+.+.+.++..++.+++|+++||+|||++++++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhc-cCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
++.+++++++ +++.++++|+++|+|.+...+.....+.+++ |+++|++++|++.....+|.++||.+++++.+++||
T Consensus 83 ~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999998 8999999999999999998888888887776 678999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChh-hhHHHH--------------hhhhCCC---------------------
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPE-LRAEEK--------------RHILGGS--------------------- 406 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~--------------------- 406 (534)
||.|++...+.++..++.++..++.+++..+ .+.... .......
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999998877777666666655554322111 110000 0000000
Q ss_pred --ccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHH
Q 009469 407 --ISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIA 484 (534)
Q Consensus 407 --~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~ 484 (534)
+.....+..+ ..+++++.++...+..++.....++...++|.|++..+|+++.+++++.....++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111222 3478888888888888888888888888999999999999999999999999999999999999999
Q ss_pred HHhhcccch
Q 009469 485 DTLVSKGLS 493 (534)
Q Consensus 485 dr~g~r~~~ 493 (534)
||+|+|+..
T Consensus 320 ~r~g~~~~~ 328 (495)
T PRK14995 320 SRLGLRLVA 328 (495)
T ss_pred HHcCchHHH
Confidence 999988643
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=2.3e-29 Score=267.41 Aligned_cols=288 Identities=19% Similarity=0.207 Sum_probs=232.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
.|..+.++++.++..+.+...+++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|+|+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 45667777888888888999999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHHHHhh-----hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 285 ATVLTPV-----AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (534)
Q Consensus 285 ~~~l~~~-----~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~ 359 (534)
+.+++++ ++ +++.+++.|++.|++.+...+...+++++|+|+++||+++|++..+..+|.++++++..++...
T Consensus 107 ~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 107 CMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 7766655 34 7899999999999999999999999999999999999999999999999999999998877665
Q ss_pred c---CchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhh-h---hCCCcccccccccc--HHHhhcchhHHHHH
Q 009469 360 F---GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRH-I---LGGSISKEAVSVIP--WKLILSKAPVWALI 430 (534)
Q Consensus 360 ~---gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~--~~~ll~~~~~~~~~ 430 (534)
. +|+..|.+.+++.++..++.++..++.+++......++... . .....+.++..... .+..++++.+|...
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLC 264 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHH
Confidence 3 69998888888877776666665555443221111111000 0 00000000111011 23368899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 431 ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 431 l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+..++.....++..+|+|.|+++.+|++..+++++.....++.+++.+++|+++||+++|+...
T Consensus 265 ~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~ 328 (467)
T PRK09556 265 FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALV 328 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH
Confidence 9999888888888999999999889999999999999999999999999999999999987543
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=2.8e-27 Score=251.73 Aligned_cols=279 Identities=14% Similarity=0.160 Sum_probs=219.3
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+++++.+...+...++.......+.+..|.+.+++|++..+++++.+++.+++.++.++.|+++||+|||+++.++.+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~ 111 (476)
T PLN00028 32 RPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLT 111 (476)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34455666666666777777778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc----
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ---- 358 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~---- 358 (534)
+++.+++++++ +++.+++.|++.|++.+.. .....++++++|+++||+++|+......+|..+++.+.+.+..
T Consensus 112 ~~~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 112 APAVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999888887 7888999999999988764 4456789999999999999999987777777777666655432
Q ss_pred -----ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHH
Q 009469 359 -----KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISH 433 (534)
Q Consensus 359 -----~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~ 433 (534)
..|||+.|++.+++.++..++.+++.++.|+... .+.++. ... ++......+++.++++++|.+.+..
T Consensus 189 ~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~--~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (476)
T PLN00028 189 AGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY--RELKKS----GTM-PKDSFSKVLRYGVTNYRTWILALTY 261 (476)
T ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch--hhHHhc----Ccc-ccccHHHHHHHHHcCchhHHHHHHH
Confidence 2589999999998888777666655544332211 110000 000 0001112356677888988888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 434 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 434 ~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
++.......+..++|.|+.+.+|++...++.+.++..++++++++++|+++||+++|+
T Consensus 262 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~ 319 (476)
T PLN00028 262 GYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhc
Confidence 7666666777888999998878999999999999999999999999999999998763
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=5.9e-28 Score=254.18 Aligned_cols=282 Identities=17% Similarity=0.242 Sum_probs=226.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
++..+...++..++.+++...++..+|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 34566666777777778888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 009469 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~ 364 (534)
+.+++++++ +++.+++.|++.|++.|..++...+++.+++|+++|++++++++.+..+|.+++|.+++++.+.+|||+
T Consensus 101 ~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 101 INILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 999999888 888999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhhh---HHHHhhhhCCCcccccccccc-H-HHhhcchhHHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELR---AEEKRHILGGSISKEAVSVIP-W-KLILSKAPVWALIISHFCHNWG 439 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~-~~ll~~~~~~~~~l~~~~~~~~ 439 (534)
.|++.+++.++..++..+..+++++...... .++..............+... + ...++++.+|.+.+..++....
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVV 258 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHH
Confidence 9998887766655544444444332110000 000000000000000001111 1 2356788889888888877777
Q ss_pred HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (534)
Q Consensus 440 ~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g 488 (534)
...+.+|+|.|+.+.+|++..+++...+...+++++++++.|+++||+.
T Consensus 259 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~ 307 (434)
T PRK11663 259 RAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLF 307 (434)
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 8888889999998778999999999999999999999999999999993
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=6.9e-28 Score=248.44 Aligned_cols=273 Identities=30% Similarity=0.547 Sum_probs=231.1
Q ss_pred HHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCC
Q 009469 217 LLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIG 296 (534)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~ 296 (534)
++..++...++...|.+.+++|.+..+++++.+++.++..++.+++|+++||+|||+++.++.++.+++.+++++++ +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~ 81 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--A 81 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--C
Confidence 45567778888999999999999999999999999999999999999999999999999999999999999999988 8
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~ 376 (534)
++.+++.|++.|++.+...+....++.|++|+++|++++++......+|.+++|.+++.+.+..+|++.|++.+++.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988887776
Q ss_pred HHHHHHhhcCCCCCChhhhHHHHhhhhCC------CccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 377 FALWLKKAYSSPKEDPELRAEEKRHILGG------SISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTY 450 (534)
Q Consensus 377 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~ 450 (534)
.++.+...++++++.+...++++...... ..+........+++.+++++++...+..++..........++|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (399)
T TIGR00893 162 GVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTY 241 (399)
T ss_pred HHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 66665555554432221111111110000 111112223456778899999999999999898999999999999
Q ss_pred HHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 451 YNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 451 ~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
+++.+|.+..+.+++.....++.+++.++.|++.||+++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99888999999999999999999999999999999999986
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=4.3e-27 Score=244.34 Aligned_cols=266 Identities=16% Similarity=0.220 Sum_probs=217.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
|+.|..++.+.+..+..........+.+|.+.+++|+++.++++..+++.++..+++++.|++.||+|||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 33566666665555555555556667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
+++.+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++.+.+.+||
T Consensus 96 ~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw 173 (394)
T PRK10213 96 TLSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW 173 (394)
T ss_pred HHHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 99999998887 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHH
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~ 442 (534)
|+.|++.+++.++..++.....|+.+++++. .....+..+++|.++...+..++...+.+.
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 234 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH-------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFA 234 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCccccc-------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999998876665544443333332211100 001234578888888877776666666666
Q ss_pred HHHHH-HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 443 LLTWM-PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 443 ~~~~l-p~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r 490 (534)
..+++ |.|. +.+|++....+++.....++.+++.++.+++.||.+++
T Consensus 235 ~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~ 282 (394)
T PRK10213 235 FFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL 282 (394)
T ss_pred HHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 67776 5555 45799999999999999999999999999999995433
No 14
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=6.8e-27 Score=241.47 Aligned_cols=272 Identities=15% Similarity=0.228 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 286 (534)
+.+..+.+..+........+.+..|.+.+++|.+..+++++.+++.++..++.+++|+++||+|||+++.++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 84 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHH
Confidence 33344444455566777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH
Q 009469 287 VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF 366 (534)
Q Consensus 287 ~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f 366 (534)
+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.|
T Consensus 85 ~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 162 (385)
T TIGR00710 85 LGLALSN--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIF 162 (385)
T ss_pred HHHHHHc--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 9998887 88899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 009469 367 YSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTW 446 (534)
Q Consensus 367 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~ 446 (534)
++.+++.++..++.+...++.++++++.+..+ ....++.++++++++...+...+.....+....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPYEARIQIST--------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSG 228 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcccCCHHH--------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHc
Confidence 98888777766665555554433221111100 1124566788898888887777777777778888
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 447 MPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 447 lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.|.++++.+|+++.+.+.+.....++.+++.++.|++.||+++|+...
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR 276 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 899998888999999999999999999999999999999999887544
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.96 E-value=1.8e-26 Score=242.77 Aligned_cols=272 Identities=15% Similarity=0.164 Sum_probs=210.6
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhC---CCcchhHH---HHHHHHHHHHHHHHHHHHHHhhhCCchHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFN---WNSTTVGL---IQSSFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~---i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 277 (534)
+++..+..+++..++.+++...++...|.+.++++ .+..+.+. +.++..++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 34566677777888999999999999999999985 45554444 4444555555999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCh--------HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHH
Q 009469 278 GVIWWSVATVLTPVAARIGL--------PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 349 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~~~~~--------~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~ig 349 (534)
+.++++++.+++++++ ++ ..++++|+++|++.|..++...++++|++|+++|+++.++...+..+|.+++
T Consensus 99 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 44 3588999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHhh--------cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhh
Q 009469 350 LAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLIL 421 (534)
Q Consensus 350 p~i~~~l~--------~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 421 (534)
+++...+. ..+|||++|++.+++.++... .....++.++ . +. +.. .+..++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~---~-~~-~~~-----------~~~~~~~~l~ 239 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQ---Q-ET-RAL-----------KEAGSLKGLW 239 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCch---H-HH-hhh-----------cccccHHHHH
Confidence 87765543 257999999987766554322 2122222211 0 00 000 0112467788
Q ss_pred cchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 422 SKAPVWALIISHFCH-NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 422 ~~~~~~~~~l~~~~~-~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
++++.+...+..++. ...++.+.+|+|.|+++.+|++..+.+.+..+..++.+++.++.|+++||++||+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~ 313 (432)
T PRK10406 240 RNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML 313 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 888887776665543 6677888899999998878999988888888888888899999999999999997543
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=9.8e-27 Score=242.61 Aligned_cols=277 Identities=21% Similarity=0.317 Sum_probs=226.4
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHH
Q 009469 202 FPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIW 281 (534)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~ 281 (534)
.+++|..+.++++..++.+++....+...|.+.+++|.++.+++++.+++.++..++.++.|+++||+|||+++.++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 282 WSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 282 ~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
..++.+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 90 ~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 90 FGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 999888888887 889999999999999999999999999999999999999999999999999999999999988899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhc---chhHHHHHHHHHHHHH
Q 009469 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILS---KAPVWALIISHFCHNW 438 (534)
Q Consensus 362 w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~---~~~~~~~~l~~~~~~~ 438 (534)
|++.|++.+++.++..++.....++.++..+.....+. . ....+..++ .+..+.+.+..++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ---------R----APVLRALFGEGRATATLLLWISYFFTLI 234 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh---------h----hhhHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 99999988876666555555555544322111000000 0 001111222 2233444444555555
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+....|+|.|+++ .|++..+.+.+.....++.++++++.|++.||+++++...
T Consensus 235 ~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 289 (406)
T PRK11551 235 VLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVL 289 (406)
T ss_pred HHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 667778889999987 6999999999999999999999999999999999887543
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=1e-26 Score=238.72 Aligned_cols=251 Identities=14% Similarity=0.096 Sum_probs=200.3
Q ss_pred HHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChH
Q 009469 219 CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP 298 (534)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~ 298 (534)
+......+++.+|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+.+.....+ +++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHH
Confidence 345566788999999999999999999999999999999999999999999999877655555544433223324 799
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Q 009469 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 299 ~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i 378 (534)
.+++.|+++|++.+. ..+....+++++|+++|++++++...+..+|.++++++++++.+.+|||+.|++.+++.++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999986 4566677799999999999999999999999999999999999999999999998888887777
Q ss_pred HHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 009469 379 LWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN 458 (534)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s 458 (534)
+++...|+.++..++....+ ....++++++++|.+|.+.+..++....++.+.+|+|.|+++ .|++
T Consensus 160 ~~~~~lp~~p~~~~~~~~~~-------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s 225 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFGFK-------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLE 225 (368)
T ss_pred HHHHHcCCCCCCCCCCcchH-------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
Confidence 77777676554321100000 001246788999999999999999999999999999999987 6888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 459 LTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 459 ~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r 490 (534)
.. .+....+..+.++++ .++++||+.|+
T Consensus 226 ~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~ 253 (368)
T TIGR00903 226 DI-AGDAVALAILAGLIG---VAVIPDRVARA 253 (368)
T ss_pred hH-HHHHHHHHHHHHHHH---HHHhhHHhhhh
Confidence 65 566666666655555 47788887654
No 18
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=9.2e-27 Score=242.01 Aligned_cols=270 Identities=16% Similarity=0.186 Sum_probs=223.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
+|+....+++..++.......++..+|.+.+++|++..+++++.+.+.+++.++.++.|++.||+|||+++.++.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46677777778888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-ccCch
Q 009469 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWP 363 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-~~gw~ 363 (534)
+.+++++++ +++.+++.|++.|++.+...+...+++.+++|+++|++++++.+....+|+.++|.+.+.+.. ..|||
T Consensus 85 ~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 85 AVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 999999887 788899999999999998888899999999999999999999999999999999999888765 57999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
+.|++.+++.++..++.+.. +.|+.+++..+ + .+. ..+. ..++.++.+.+..++....++.+
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~-~----------~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 224 (394)
T PRK03699 163 WVYACIGLVYVAIFILTLFS--EFPALGKHAPK-A----------DKP----VAKE-KWGIGVLFLAIAALLYILAQLTF 224 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCccccccCcc-c----------cCc----cccc-cCChHHHHHHHHHHHHHHHHHHH
Confidence 99998887776655544332 11111111000 0 000 0011 12456777777777777788888
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..|+|.|+++.+|++..+++.+.+...++.++++++.|+++||+++|+.+.
T Consensus 225 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 225 ISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILT 275 (394)
T ss_pred HHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH
Confidence 999999998888999999999999999999999999999999999987544
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=2.2e-26 Score=240.06 Aligned_cols=278 Identities=15% Similarity=0.127 Sum_probs=232.4
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHH
Q 009469 202 FPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIW 281 (534)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~ 281 (534)
.++.|...+.+.+..++..+....+.+.+|.+.+++|.+..+.++..+.+.+++.++.++.|+++||+|||+++.++.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 35567777777788888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 282 WSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 282 ~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
.+++.+++.+++ +++.+++.|++.|++.+...+...+.+.|++|+++|++++++......+|..+||.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999999888887 888999999999999998888899999999999999999999998888999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHH
Q 009469 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTF 441 (534)
Q Consensus 362 w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~ 441 (534)
||+.|++.+++.++..+..+...++++.+.++.... .....+++.++++|.++...+..++......
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-------------KELGRDYKLVLKNRRFVAGALALGLVSLPLL 232 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 999999988887776665554444433221110000 0011345678899999988888777776666
Q ss_pred HHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 442 ILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 442 ~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
...++.|.++.+.+|+++.+.++......++.+++.++.+++.||+++|+...
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~ 285 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIR 285 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 77778899988888999999998888888889999999999999999887544
No 20
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=6.1e-27 Score=249.79 Aligned_cols=283 Identities=16% Similarity=0.234 Sum_probs=234.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 287 (534)
.+..+++..++..++.....+.+|.+.+++|.+..+++|+.+.+.++..++.++.|+++||+|||++++++.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45566677788888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH
Q 009469 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (534)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~ 367 (534)
++++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.++.|||+.|+
T Consensus 83 ~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999988 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChhh-hHHHH------------hhhhCCCc--------------------------c
Q 009469 368 SFGSLGSIWFALWLKKAYSSPKEDPEL-RAEEK------------RHILGGSI--------------------------S 408 (534)
Q Consensus 368 i~~~~~~i~~i~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~--------------------------~ 408 (534)
+.+.+.++..++.+...+++++...+. +.... ........ .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 988777766665555544432221111 10000 00000000 0
Q ss_pred ccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 409 KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (534)
Q Consensus 409 ~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g 488 (534)
..+.+..+ ..+++++.++...+..++..+..+...+++|.|+++.+|+++.+++++.....++.+++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 00111112 24678888888888888888888888999999999989999999999999999999999999999999999
Q ss_pred cccch
Q 009469 489 SKGLS 493 (534)
Q Consensus 489 ~r~~~ 493 (534)
+|+..
T Consensus 320 ~~~~~ 324 (485)
T TIGR00711 320 PRKLV 324 (485)
T ss_pred cHHHH
Confidence 98753
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=2.2e-26 Score=239.04 Aligned_cols=289 Identities=16% Similarity=0.241 Sum_probs=220.1
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+++|+.+..+++..+...++....++..|.+.+++|++..+++++.+++.++..++.++.|+++||+|||+++.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45688889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG- 361 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g- 361 (534)
+++.+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 88 SAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999998888 899999999999999999999999999999999999999999999999999999999999988776
Q ss_pred -chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHH-hh----hhCCCccccc---cccccHHHhh-cch-hHHHHH
Q 009469 362 -WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK-RH----ILGGSISKEA---VSVIPWKLIL-SKA-PVWALI 430 (534)
Q Consensus 362 -w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~---~~~~~~~~ll-~~~-~~~~~~ 430 (534)
||+.|++.++..++.. +.....+++++..+..+.++. .. ........+. ......+... +.+ .+..+.
T Consensus 166 ~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (405)
T TIGR00891 166 GWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLV 244 (405)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHH
Confidence 9999987655444433 223333332211111100000 00 0000000000 0000001000 111 122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 431 ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 431 l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+...+..........++|.|+.+.+|++..+.+.+.....++.++++++.|++.||+++|+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 308 (405)
T TIGR00891 245 VLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYV 308 (405)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhH
Confidence 3333444445566678899998888999999999999999999999999999999999998654
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=1.8e-26 Score=238.78 Aligned_cols=265 Identities=16% Similarity=0.214 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH
Q 009469 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l 288 (534)
+.......+..........+.+|.+.+++|++..++|++.+.+.++..++++++|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 33444556666777778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 009469 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (534)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i 368 (534)
+++++ +++.+++.|++.|++.+...+....++.+++|+++|+++++++..+..+|..++|++++++.+..|||++|++
T Consensus 85 ~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 99988 8999999999999999988888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
.+++.++..+..+...|+.+++.+. ... ..+ +.++++..|...+..++...+.+...++++
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~-~~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG-GLR-----------------EQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIK 223 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc-CHH-----------------HHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776665555444443221110 000 012 246677777766666665556666667778
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.++.+.+|+++.+.+++.....++.++++++.+++.||+++++...
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAA 269 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHH
Confidence 8888778999999999999999999999999999999999887544
No 23
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=2e-26 Score=239.45 Aligned_cols=266 Identities=13% Similarity=0.180 Sum_probs=216.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
.|......+...+.... ....++++|.+.+++|+|..+++++.+++.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 35544444444333322 26678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-Cch
Q 009469 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWP 363 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-gw~ 363 (534)
+.+++++++ +++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||
T Consensus 87 ~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~ 163 (393)
T PRK09705 87 GALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWY 163 (393)
T ss_pred HHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 999999999 88899999999999999999999999999996 88999999999999999999999999998875 899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
+.+.+.++..++.....+...++.+++++.. + ...++.+++++.|.+.+..++...+++..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 224 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVASSHKT--------------T-----TTPVRVVFTPRAWTLGVYFGLINGGYASL 224 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccCC--------------C-----cCCcccccCHhHHHHHHHHHHHHHHHHHH
Confidence 9887766655444333333222222111000 0 01123456778888888777778888889
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.+|+|.|+++ +|++..+++.+..+..++.++++++.+++.||+++|+..+
T Consensus 225 ~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~ 274 (393)
T PRK09705 225 IAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLM 274 (393)
T ss_pred HHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Confidence 9999999988 7999999999999999999999999999999999887544
No 24
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=2.5e-27 Score=241.23 Aligned_cols=271 Identities=27% Similarity=0.470 Sum_probs=220.2
Q ss_pred HHHHHHHHhhhhHHHHhHH-HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh
Q 009469 213 FSAFLLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~ 291 (534)
++..++..+......+..| .+.+++|.+..+++++.+++.++..++.++.|+++||+|||+++.++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 3456667777788888888 889999999999999999999999999999999999999999999999999999666666
Q ss_pred hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHH
Q 009469 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (534)
Q Consensus 292 ~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~ 371 (534)
++ +.+.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.+++|.+++.+.+.++||+.|++.++
T Consensus 82 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 AS--NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hh--hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 65 7779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCcccccccccc-HHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIP-WKLILSKAPVWALIISHFCHNWGTFILLTWMPTY 450 (534)
Q Consensus 372 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~ 450 (534)
+.++..++.....++++++++...+.+.. ...+.+..+ ++.+++++.+|...+..++..+.......++|.|
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchh
Confidence 88888775444443333222211111100 000111122 5667778878766666666666778889999999
Q ss_pred HHHhhCCC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 451 YNQVLKFN-LTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 451 ~~~~~g~s-~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
+.+.+|++ ..+.+.+..+..+.++++.++.|++.||+++++.
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 275 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR 275 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 77889999 8899999999999999999999999999998654
No 25
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=7.4e-26 Score=234.97 Aligned_cols=267 Identities=13% Similarity=0.126 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHh-hhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
++.+.+..+..++.......+++..+.+.+ ++|++..+.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 567888888888888999999999998866 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhc---cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----
Q 009469 285 ATVLTPVAA---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI---- 357 (534)
Q Consensus 285 ~~~l~~~~~---~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~---- 357 (534)
..++++++. ..+++.+++.|++.|++ +..+++....+++|+|+++||+++|+.....++|..+++++.+.+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999988861 12799999999999998 6688999999999999999999999998777777776666665433
Q ss_pred -c-------------ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcc
Q 009469 358 -Q-------------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK 423 (534)
Q Consensus 358 -~-------------~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 423 (534)
. ..+|+.++++.+++.++..++.++..++.+..+. .....+.++|+
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~--------------------~~~~~~~vlk~ 251 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA--------------------SIADQLPVLQR 251 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc--------------------CHHHHHHHhCC
Confidence 2 2347777777777777666666665444332111 01234558999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
|..|.+.+.+++.+.++.++..++|+|+++.+ +.........+..+...+.++++|+++||+|+++++..
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~ 321 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI 321 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence 99999999999999899989999999998854 33333333445567888999999999999999986553
No 26
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=4.4e-26 Score=241.20 Aligned_cols=285 Identities=15% Similarity=0.247 Sum_probs=217.9
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
++|..+..+++.......+...++...|.+.++ |++..+.+++.+++.+++.++++++|+++||+|||++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 346655656666666667767778888888888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhc--cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHH-HHHHHHHHhhccc
Q 009469 284 VATVLTPVAA--RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSV-TGLAVSPILIQKF 360 (534)
Q Consensus 284 i~~~l~~~~~--~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~-igp~i~~~l~~~~ 360 (534)
++.+++++++ ..+++.+++.|++.|++.+..++.....+.+++|+++|++++++++.+..+|+. ++|+++..+....
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 9998887753 125778899999999999988888888999999999999999999999998864 5565544444445
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCC---Ccccccccccc--HHHhhcchhHHHHHHHHHH
Q 009469 361 GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGG---SISKEAVSVIP--WKLILSKAPVWALIISHFC 435 (534)
Q Consensus 361 gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~ll~~~~~~~~~l~~~~ 435 (534)
|||+.|++.+++.++..++.+++.+++++.....+.++....... ....+..+..+ .+.+++++.+|...+..++
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 999999998888777666666655554432111111000000000 00000001111 2336788999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS 489 (534)
Q Consensus 436 ~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~ 489 (534)
.....+....|+|.|+++..|++..+++.+..+..++.+++.++.|+++||+++
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888888889999999999889999999998888899999999999999999943
No 27
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=1.1e-26 Score=238.37 Aligned_cols=272 Identities=19% Similarity=0.230 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
|..+....+..+ .....+.+++..|.+.+++|++..+++++.+++.++..++++++|+++||+|||+++.++.++.+++
T Consensus 3 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 3 WYVLVGTVIMCF-TSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred EEEeHHHHHHHH-HhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 344444444333 3344667889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHH
Q 009469 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (534)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~ 365 (534)
.+++++++ +++.+++.|++.|++.+..++.....+.+++| ++|++++++...+..+|..+++++.+.+.+..|||+.
T Consensus 82 ~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 158 (377)
T TIGR00890 82 FTFYAIAD--SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAA 158 (377)
T ss_pred HHHHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHH
Confidence 99999998 89999999999999999888888889999995 6899999999999999998887777777888899999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 009469 366 FYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT 445 (534)
Q Consensus 366 f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~ 445 (534)
|++.+++.++..++.+...++++++....+. +........++.++++.++.+.+..++..........
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (377)
T TIGR00890 159 FIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI------------EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIG 226 (377)
T ss_pred HHHHHHHHHHHHHHHHHheecCchhccccCc------------ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHH
Confidence 9999988877776666555443321111000 0000112355678888888887777776666666666
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 446 ~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+.+.|.++ +|.+..+.+.+.....++.++++++.|++.||++||+...
T Consensus 227 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 274 (377)
T TIGR00890 227 LYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMS 274 (377)
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 77777766 7888888999999999999999999999999999987544
No 28
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=1.4e-25 Score=239.83 Aligned_cols=282 Identities=18% Similarity=0.210 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcch-hHH-----HHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTT-VGL-----IQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGV 279 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~g~-----i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~ 279 (534)
+..++.+.++.++.+++...++...|.+.++++.+... ..+ +.++..++..++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45667777888999999999999999999998644322 222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCChH--------HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHH
Q 009469 280 IWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLA 351 (534)
Q Consensus 280 ~~~~i~~~l~~~~~~~~~~--------~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~ 351 (534)
++++++.+++++++ ++. .++++|+++|++.|+.++...++++|++|+++||++.++...+..+|.++|+.
T Consensus 95 ~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 665 38899999999999999999999999999999999999999888888888887
Q ss_pred HHHHhh--------cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcc
Q 009469 352 VSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK 423 (534)
Q Consensus 352 i~~~l~--------~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 423 (534)
+...+. ..+|||+.|++.+++.++. ++.....+++++........++. .. ....+.+..++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~ 247 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQHVDKLEQG---DR-EGLQDGPKVSFKEIATK 247 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHHHHhhhhh---cc-ccccccccCCHHHHHHH
Confidence 665443 2579999999866544432 22223334432211110000000 00 00001112345556553
Q ss_pred -hhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 424 -APVWA-LIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 424 -~~~~~-~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
++.+. .....++..+.++.+..|+|.|+++.+|++....++......++.+++.++.|+++||+|||+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 320 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVI 320 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 22222 223334455677888899999998878999888888888888999999999999999999997544
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=1.1e-26 Score=238.73 Aligned_cols=274 Identities=21% Similarity=0.263 Sum_probs=224.4
Q ss_pred HHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc
Q 009469 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR 294 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~ 294 (534)
.++....+...++...|.+.+++|++..+++++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST- 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-
Confidence 3456677888889999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHH-HHHHHhhcccCchHHHHHHHHHH
Q 009469 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGL-AVSPILIQKFGWPSVFYSFGSLG 373 (534)
Q Consensus 295 ~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp-~i~~~l~~~~gw~~~f~i~~~~~ 373 (534)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..++| .+++.+.+..+|++.|++.+++.
T Consensus 82 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 -SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999 57777778889999999888877
Q ss_pred HHHHHHHHHhhcCCCCCChhhhHHHHh-hhhC----CCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 374 SIWFALWLKKAYSSPKEDPELRAEEKR-HILG----GSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 374 ~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
++..++.+...++.++.......++.. +..+ ...+........++.++++|.+|.+.+..++..........+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP 240 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666655555443321111000000 0000 00000011122356678899999998888888888888899999
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r 490 (534)
.|+.+.+|++..+.+.+.....++.++++++.+++.||..++
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 999988899999999999999999999999999999987443
No 30
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=1.1e-25 Score=236.24 Aligned_cols=284 Identities=16% Similarity=0.209 Sum_probs=220.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+.+|..++.+++..+...++.....+..|.+.+++|+++.+.+++.+++.++..++++++|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34566777888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
+++.+++++++ +++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.++|
T Consensus 94 ~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 99999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHH---HHHHH
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHF---CHNWG 439 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~---~~~~~ 439 (534)
|+.|++.++..++ .. .+ ....++..+.. .++..................++.+++++.++...+... +....
T Consensus 172 ~~~f~i~~~~~~~-~~-~~--~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (426)
T PRK12307 172 RAAFFVGLLPVLL-VI-YI--RARAPESKEWE-EAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGA 246 (426)
T ss_pred HHHHHHHHHHHHH-HH-HH--HHHCCCChHHH-HhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHH
Confidence 9999874433222 11 11 11111111110 000000000000000111124667788877765443322 22223
Q ss_pred HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 440 ~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.+.+..++|.|+++ .|+++...+.+.+...++.++++++.|++.||+++|+...
T Consensus 247 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~ 300 (426)
T PRK12307 247 NWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFS 300 (426)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34467788999987 5999999999999999999999999999999999987544
No 31
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=1.4e-25 Score=234.39 Aligned_cols=264 Identities=13% Similarity=0.096 Sum_probs=219.0
Q ss_pred HHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh
Q 009469 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~ 292 (534)
.+..+...+....+.+.+|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++++.++++++.++++++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 44445566777888889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHH
Q 009469 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (534)
Q Consensus 293 ~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~ 372 (534)
+ +++.++++|+++|++.+...+....++.|++|+++|+++++++..+..+|..+||++++.+.+..|||+.|++.+++
T Consensus 102 ~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 102 T--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8 89999999999999988767777889999999999999999999999999999999999999889999999998888
Q ss_pred HHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (534)
Q Consensus 373 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~ 452 (534)
.++..++.++..|+.++++++... .......++.++++|.+|...+..++.....+.+..+.|.+++
T Consensus 180 ~~i~~~~~~~~lp~~~~~~~~~~~-------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~ 246 (413)
T PRK15403 180 GLIAFVGLLLAMPETVKRGAVPFS-------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILI 246 (413)
T ss_pred HHHHHHHHHHhCCCCccccCCCCC-------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 777665545444543321111000 0001235677899999999988888888888888888899999
Q ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 453 ~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
+.+|+++.+.++......++.+++..+.+.+.++..+++
T Consensus 247 ~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~ 285 (413)
T PRK15403 247 DAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR 285 (413)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh
Confidence 988999999999988888888888888777665444433
No 32
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.95 E-value=6.3e-26 Score=232.80 Aligned_cols=279 Identities=15% Similarity=0.214 Sum_probs=214.9
Q ss_pred HHHHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH
Q 009469 211 LCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~ 289 (534)
..++..++.......+.+..|. +.+++|++..+++++.+++.+++.++++++|+++||+|||++++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3455556667777888899995 899999999999999999999999999999999999999999999999999999888
Q ss_pred hhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc----------c
Q 009469 290 PVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----------K 359 (534)
Q Consensus 290 ~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~----------~ 359 (534)
++++. +++.+++.|++.|++.+. .++..+++++++|+++|++++++......+|..+++.+++.+.. .
T Consensus 85 ~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 GLAVQ-SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHhh-hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 87753 578889999999998654 56778999999999999999999998888888888877776654 3
Q ss_pred cCchHHHH-HHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHH
Q 009469 360 FGWPSVFY-SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 438 (534)
Q Consensus 360 ~gw~~~f~-i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 438 (534)
.+||+.|+ +.+++.++..++.+...++.++++++..+.+.. ..............++.+++++++...+..++...
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFG 239 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHHH
Confidence 48999994 445555544444444444433221111100000 00000000111145567888889888888887777
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+....++|.|+++.+|+++.+++.+..+..+..++++++.|++.||+++|+...
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 295 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLL 295 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHH
Confidence 77888899999999989999999999999999999999999999999999986543
No 33
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=2.9e-26 Score=227.67 Aligned_cols=275 Identities=18% Similarity=0.228 Sum_probs=241.5
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+.+++.+.+..+...+..+.++++++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 34467777788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcc-CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 283 SVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 283 ~i~~~l~~~~~~-~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
.+-.+..+++.+ .+++.+++++++.|++.+ .++.....++.|||++++|.++|++. ..++|..+..++++.++...|
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 999999988863 245699999999999855 56889999999999999999999999 899999999999999999998
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHH
Q 009469 362 ---WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 438 (534)
Q Consensus 362 ---w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 438 (534)
|+.+..+..+..++..++.++...+.++.++..++... ..++.++++++.|.+.+.++..+.
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------------~~~~~v~~~~~~W~lsllY~~tFG 232 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------------AQLKAVFSNKDTWLLSLLYFATFG 232 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------hHHHHHhcCcchHHHHHHHHHHHH
Confidence 99999999998888888888887776553221111110 235668889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
++.++..++|.|+++++|.+..+++.+.....+.+.+.|+++|+++||+|.++...
T Consensus 233 ~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~ 288 (417)
T COG2223 233 GFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL 288 (417)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999888644
No 34
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=2.3e-25 Score=231.31 Aligned_cols=269 Identities=16% Similarity=0.196 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH
Q 009469 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l 288 (534)
+.......+..........+.+|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++..++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 33444555566666667778899999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 009469 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (534)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i 368 (534)
+.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.|++
T Consensus 85 ~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~ 162 (392)
T PRK10473 85 CSLAE--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYT 162 (392)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHH
Confidence 88887 7888999999999999998999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
.+++.++..++.+...++++++++..... .....++.++++.++...+...+.......+..+.|
T Consensus 163 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (392)
T PRK10473 163 MAAMGILVLLLSLFILKETRPARAPAASS---------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSP 227 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccCCccc---------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 88887776666555555443221110000 011234567788777666655555555555666778
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.++++.+|++..+.+.+.....++.+++.++.+++.||+++|+...
T Consensus 228 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~ 273 (392)
T PRK10473 228 VLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLML 273 (392)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 8888878999999999999999999999999999999999987544
No 35
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=5.6e-25 Score=234.04 Aligned_cols=284 Identities=14% Similarity=0.199 Sum_probs=228.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 287 (534)
.+.++++..++..++.+.+.+..|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34455566777788888888999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH
Q 009469 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (534)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~ 367 (534)
++.+++ +++.+++.|+++|++.+...+...+++.+++|+++|++++++......+|..+||.+++.+.+..|||+.|+
T Consensus 91 ~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 888877 788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHh-----------hhhCCC--------------------------cccc
Q 009469 368 SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR-----------HILGGS--------------------------ISKE 410 (534)
Q Consensus 368 i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------------------------~~~~ 410 (534)
+...+..+..++.....++.+....+.+..... ...+.. +...
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 887776666555555444332221111100000 000000 0001
Q ss_pred ccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 411 AVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 411 ~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r 490 (534)
..+..+. .+++++.++...+..++...+......+.|.|++...|.++..++++.....++.+++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1122233 378899998888888888888777778889999887899999999999988899999999999999999998
Q ss_pred cchH
Q 009469 491 GLSI 494 (534)
Q Consensus 491 ~~~i 494 (534)
+.+.
T Consensus 328 ~~~~ 331 (471)
T PRK10504 328 RVLV 331 (471)
T ss_pred HHHH
Confidence 7544
No 36
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.95 E-value=2.6e-25 Score=227.29 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=218.3
Q ss_pred HHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh
Q 009469 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~ 292 (534)
....++..+......+.+|.+..+++.+..+++++.+++.++..++.+++|+++||+|||+++.++.++..++.++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777888888999999999999999999999999999999999999999999999999888877776665
Q ss_pred c---cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHH
Q 009469 293 A---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF 369 (534)
Q Consensus 293 ~---~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~ 369 (534)
. ..+++.+++.|++.|++.+...++..+++.|++|+++|++++++...+..+|.++||.+++.+.+..||++.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 4 1267889999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHH-HHHH
Q 009469 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL-TWMP 448 (534)
Q Consensus 370 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~-~~lp 448 (534)
++..++..++.+....+++++.+..+.+++. .......++.++++|.++...+..++......... .+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAASEIQALSNAV---------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFP 235 (365)
T ss_pred HHHHHHHHHHHHhcccccCCCccccccchhH---------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 7766555444433322221111111000000 00011245667889988888888777777776666 7889
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
.|.++.+|.+..+.+.+.....++.+++.++.+++.||+++++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 280 (365)
T TIGR00900 236 YVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM 280 (365)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH
Confidence 999887899999999999999999999999999999999988643
No 37
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.95 E-value=3e-25 Score=233.96 Aligned_cols=286 Identities=17% Similarity=0.258 Sum_probs=219.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
+|..+..+.+.....+.....+....|.+.+ +|+++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3555566666666666666667777777775 599999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcc--CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-ccC
Q 009469 285 ATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFG 361 (534)
Q Consensus 285 ~~~l~~~~~~--~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-~~g 361 (534)
+.+++++.+. .+++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+..+|+.+++.+.+.+.. ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 8887766431 2567788899999999999889899999999999999999999999999999999888776544 579
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHH-HhhhhC--CCcccccc--ccccHHHhhcchhHHHHHHHHHHH
Q 009469 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEE-KRHILG--GSISKEAV--SVIPWKLILSKAPVWALIISHFCH 436 (534)
Q Consensus 362 w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~--~~~~~~~ll~~~~~~~~~l~~~~~ 436 (534)
||+.|++.+++.++..++.++..++.++.....+.++ +.+... ....+... +....+.+++++.+|...+..++.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFV 263 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHH
Confidence 9999999888887766666555555432211000000 000000 00000000 011123467889999988888887
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 437 NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 437 ~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
....+...+|+|.|+++..|+++.+++++..+..++++++++++|++.||+++++
T Consensus 264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 7788888899999999888999999999999999999999999999999996543
No 38
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=2.5e-25 Score=229.53 Aligned_cols=261 Identities=18% Similarity=0.248 Sum_probs=219.9
Q ss_pred hhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
+....+.+.+|.+.+++|+++.+++++.+++.++..++.+++|+++||+|||+++.++.++.+++.+++.+++ +++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHH
Confidence 3455677889999999999999999999999999999999999999999999999999999999999998887 88899
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~ 380 (534)
++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|..++|.+++.+.+..+|++.|++.+++.++..++.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888877766665
Q ss_pred HHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChh
Q 009469 381 LKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT 460 (534)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~ 460 (534)
....++.++++++.+.. ......+++..++++.++...+..++...+.+....+.|.++.+.+|+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 230 (377)
T PRK11102 163 FFFIPETLPKERRQPFH------------LRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQ 230 (377)
T ss_pred HHhCCccCcccccCCCC------------hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHH
Confidence 55555433221110000 000112456678888888877777777777777777888888888899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 461 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 461 ~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
+.+++.....++.+++.++.+++.||+|+|+....
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 265 (377)
T PRK11102 231 NFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRF 265 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999986543
No 39
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=7.9e-25 Score=230.46 Aligned_cols=274 Identities=16% Similarity=0.176 Sum_probs=205.2
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHH-HHHH-----HHHHHHHHHHHHHHHhhhCCchHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLI-QSSF-----FWGYLLTQIVGGIWADKFGGKPVLGF 277 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i-~s~~-----~l~~~~~~~~~G~l~Dr~Grr~~l~~ 277 (534)
.||+....+++..++.+++...++...|.+.++++.++.+.+.+ .+.. .++..+++++.|+++||+|||++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 34667888888999999999999999999999999988876543 3322 22334688999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCChH--------HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHH
Q 009469 278 GVIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 349 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~~~~~~--------~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~ig 349 (534)
+.++++++.+++++++ +++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..++
T Consensus 92 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g 169 (434)
T PRK15075 92 TLSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFA 169 (434)
T ss_pred HHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 554 468999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHhh--------cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhh
Q 009469 350 LAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLIL 421 (534)
Q Consensus 350 p~i~~~l~--------~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 421 (534)
+.+++.+. +.+|||++|++.++...+ .+.. ++.+++.++...++.+ ......++...
T Consensus 170 ~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~----~~~~-~~~~~e~~~~~~~~~~----------~~~~~~~~~~~ 234 (434)
T PRK15075 170 ALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF----IFLI-RRSLEETEEFLARKHR----------PSMREIFRSLA 234 (434)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH----HHHH-HHhcCCCHHHHHhhhc----------cccccHHHHHH
Confidence 88777653 468999999874432211 1111 1111111110000000 00011233344
Q ss_pred cchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 422 SKAPVWALI-ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 422 ~~~~~~~~~-l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
++++.+... +..++.....+....|.|.|+++.+|++..+.+++..+..++.+++.++.|+++||++||+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~ 308 (434)
T PRK15075 235 ANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLI 308 (434)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 555544433 3334455667778889999999888999999999888889999999999999999999997644
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=2.9e-25 Score=229.78 Aligned_cols=286 Identities=24% Similarity=0.367 Sum_probs=220.7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
+++|..+..+++..+...+.........|.+.+++|.+..+++++.+++.++..++.++.|+++||+|||+++.++.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 34566777777777777788888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
+++.+++.+.+ +++.+++.+++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 93 ~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 99998888887 7888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHH----hhhh---C-C-----Ccc-ccc-cccccHHHhhcc---h
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK----RHIL---G-G-----SIS-KEA-VSVIPWKLILSK---A 424 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~----~~~~---~-~-----~~~-~~~-~~~~~~~~ll~~---~ 424 (534)
++.|++.+++.++..++.+...++.++.....+.++. .... . . .++ ... .....++.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 9999988766666655555555544321111100000 0000 0 0 000 000 001112222322 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
..+.+.+..++.....+....++|.+.. .+|++..+.+.+.....++.++++++.+++.||+++|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV 316 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 3444555555666667777788885554 47999999999999999999999999999999999883
No 41
>PRK10133 L-fucose transporter; Provisional
Probab=99.95 E-value=1e-24 Score=229.43 Aligned_cols=274 Identities=15% Similarity=0.191 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
+..+......++...+.........|.+++++|+++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45556666677777888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-c--
Q 009469 286 TVLTP---VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-K-- 359 (534)
Q Consensus 286 ~~l~~---~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-~-- 359 (534)
.+++. +++ +++.++++|+++|+|.+...+..+.++.++.|+++|...+++.+....+|..++|.+++.+.. .
T Consensus 105 ~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~ 182 (438)
T PRK10133 105 AALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVP 182 (438)
T ss_pred HHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 98763 455 899999999999999999999999999998877777778999999999999999999876541 0
Q ss_pred -----------------------cCchHHHHHHHHHHHHHHHHH-HHhhcCCCCCChhhhHHHHhhhhCCCccccccccc
Q 009469 360 -----------------------FGWPSVFYSFGSLGSIWFALW-LKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVI 415 (534)
Q Consensus 360 -----------------------~gw~~~f~i~~~~~~i~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
.+||++|+....+..+..++. ....++.+.+ +. .+ + .......
T Consensus 183 ~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~-~~-~~-~----------~~~~~~~ 249 (438)
T PRK10133 183 HQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD-NH-SD-A----------KQGSFSA 249 (438)
T ss_pred ccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc-cc-c----------cccchhh
Confidence 245666654443333222222 2212221110 00 00 0 0000112
Q ss_pred cHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 416 PWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY-NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 416 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~-~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.++.++++|.++...+..++..........|++.|+ ++.+|+++.++++......++.++++++++++.||+++|+.+.
T Consensus 250 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~ 329 (438)
T PRK10133 250 SLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA 329 (438)
T ss_pred hHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 356688899888877777777778887888888885 5668999999999999999999999999999999999987644
No 42
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=2e-24 Score=224.94 Aligned_cols=258 Identities=17% Similarity=0.214 Sum_probs=214.3
Q ss_pred HHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc
Q 009469 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR 294 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~ 294 (534)
..++..+....+.+.+|.+.+++|.++.+++++.+++.++..++++++|+++||+|||+++.++.++..++.+++.+++
T Consensus 14 ~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 92 (401)
T PRK11043 14 LSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE- 92 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 3455556677788888999999999999999999999999999999999999999999999999999999998888887
Q ss_pred CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHH
Q 009469 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (534)
Q Consensus 295 ~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~ 374 (534)
+++.+++.|++.|++.+...+...+++.|++|++++++.++.......+|..++|.+++++.+.+|||+.|++.+++.+
T Consensus 93 -~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 -SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITL 171 (401)
T ss_pred -CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 8899999999999998888888889999999999999999999999999999999999999999999999998888777
Q ss_pred HHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 375 IWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV 454 (534)
Q Consensus 375 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~ 454 (534)
+..++.+...++.++++ . + + ...+++++++++.++...+...+.....+....+.|.++++
T Consensus 172 ~~~~~~~~~~~~~~~~~-~--~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 232 (401)
T PRK11043 172 LLILPTLRLKPSKKARK-Q--S-Q--------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ- 232 (401)
T ss_pred HHHHHHHHcCCCCCccc-c--c-h--------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-
Confidence 66655544433222111 0 0 0 01246667888888776666666666667777888988876
Q ss_pred hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 455 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 455 ~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
+|++..+.++......++.+++.++.+++.||+++++..
T Consensus 233 ~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~ 271 (401)
T PRK11043 233 MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL 271 (401)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 799999999988888889999999999999999988743
No 43
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=1.1e-25 Score=245.62 Aligned_cols=282 Identities=17% Similarity=0.216 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~ 289 (534)
+.+.+..+.........+..++.++++|+++..+.|++.+.+.+++.++.++.|++.||+|||+++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 33444566666777888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhc-------------------------------------------------cCChHHHHHHHHHHhhcccchhhHHHH
Q 009469 290 PVAA-------------------------------------------------RIGLPFLLIMRAFMGIGEGVAMPAMNN 320 (534)
Q Consensus 290 ~~~~-------------------------------------------------~~~~~~ll~~r~l~Gig~g~~~~~~~~ 320 (534)
++.+ +..+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 7753 012556789999999999999999999
Q ss_pred HHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc----------------------CchHHHHHHHHHHHHHHH
Q 009469 321 MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF----------------------GWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 321 ~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~----------------------gw~~~f~i~~~~~~i~~i 378 (534)
++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988643 156667777777776665
Q ss_pred HHHHhhcCCCCCChhh--hHHHHhhhhC-CCcc-c-----cccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 379 LWLKKAYSSPKEDPEL--RAEEKRHILG-GSIS-K-----EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (534)
Q Consensus 379 ~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~-~-----~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~ 449 (534)
+++.+.++.++..... +..+...... .... . .......++.++++|.++...+..++...+.+++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555444433221111 0000000000 0000 0 0011234677899999999999999999999999999999
Q ss_pred HHHHhhCCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhccc
Q 009469 450 YYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 450 ~~~~~~g~s~~~~g~l~~~~~~-~~iig~~i~g~l~dr~g~r~ 491 (534)
|+++.+|+++.+++++..+..+ +.+++.+++|+++||++.+.
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~ 398 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNV 398 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccH
Confidence 9999999999999999887776 66899999999999998553
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.94 E-value=7.1e-25 Score=231.97 Aligned_cols=278 Identities=14% Similarity=0.163 Sum_probs=217.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
+|.++..+++...........++..++.+.+++|++..+++++.+.+.++..++.+++|+++||+|||++++++.++.++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 47777777777666666666788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHH-HHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 285 ATVLTPVAARIGLPFLLI-MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~-~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
+.+++++++ +++.+++ .|++.|++.+...++..+++.++++ ++|++++++...+..+|..++|++++.+.+.+|||
T Consensus 97 ~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr 173 (455)
T TIGR00892 97 GMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWR 173 (455)
T ss_pred HHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChH
Confidence 999998887 6766654 5789999998777778888999995 78999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhH-HHHhhhh-CCCc------cccccccccHHHhhcchhHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRA-EEKRHIL-GGSI------SKEAVSVIPWKLILSKAPVWALIISHFC 435 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~------~~~~~~~~~~~~ll~~~~~~~~~l~~~~ 435 (534)
++|++.+++.++..+..++..+..+.+.....+ ++..... .... ..+..+..++ .++++|.++...+..++
T Consensus 174 ~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 252 (455)
T TIGR00892 174 GSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSGNVI 252 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHHHHH
Confidence 999999888776555444443322111000000 0000000 0000 0000011112 46788999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL 487 (534)
Q Consensus 436 ~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~ 487 (534)
..++.+....++|.|+++ .|++..+++++.++..++.++++++.|++.||.
T Consensus 253 ~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 888888888899999987 699999999999999999999999999999974
No 45
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=1.7e-24 Score=225.65 Aligned_cols=273 Identities=14% Similarity=0.116 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 287 (534)
.+....++.++...........++.+.+++|.+..+.+++.+.+.++..++.+++|++.||+|||+++..+.++++++.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~ 93 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHA 93 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 34444444444545544455566777788999999999999999999999999999999999999999999999988876
Q ss_pred HHh---hhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHH-HHHHHHHHHhhcccCch
Q 009469 288 LTP---VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGS-VTGLAVSPILIQKFGWP 363 (534)
Q Consensus 288 l~~---~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~-~igp~i~~~l~~~~gw~ 363 (534)
++. +.. .+++.+++.|++.|++.+...+...+.+.+++|+++|++++|+...+.++|. +++|++++.+.+.+||+
T Consensus 94 ~~~~~~~~~-~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 94 AFIVFGLGH-ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHhccC-ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 553 221 2678888999999999888778888889999999999999999999999996 68999999999888977
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
..+|.......+..++.++..++.+++++..++. +.......++.++++|.++...+..++.....+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHMQTRE-----------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGF 241 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcccccCCc-----------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 6666544443333333333333322111110000 00001123566889999998888888888888889
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
.++.|.|+++ +|++..+.+.+.....++.+++.++.|+++||+++|+..
T Consensus 242 ~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 242 AVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 9999999876 799999999988899999999999999999999988753
No 46
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=3.2e-24 Score=226.03 Aligned_cols=278 Identities=17% Similarity=0.193 Sum_probs=203.7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHH-HHhhh--CCCcchhHHHH-----HHHHHHHHHHHHHHHHHHhhhCCchH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILP-MSKEF--NWNSTTVGLIQ-----SSFFWGYLLTQIVGGIWADKFGGKPV 274 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~g~i~-----s~~~l~~~~~~~~~G~l~Dr~Grr~~ 274 (534)
.++|+.+..+++..++.+++...++...+. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 344667778888889999999998888775 45555 66665 45543 34556677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCChH--------HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHH
Q 009469 275 LGFGVIWWSVATVLTPVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGS 346 (534)
Q Consensus 275 l~~g~~~~~i~~~l~~~~~~~~~~--------~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~ 346 (534)
+.++.++++++.+++++++ ++. .++++|+++|++.|..++....++.|++|+++|++..+....+..+|.
T Consensus 97 l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999998 655 588899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc--------ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHH
Q 009469 347 VTGLAVSPILIQ--------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWK 418 (534)
Q Consensus 347 ~igp~i~~~l~~--------~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (534)
+++..+...+.. .+|||+.|++.+++.++.. ......++.++ ..+...+. + +.++ +....+
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~----~~~~~~~~--~--~~~~--~~~~~~ 243 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAE----FEQQQHEQ--A--AAKK--RIPVIE 243 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChh----HHHHHhhc--c--cccc--cCCHHH
Confidence 998877776652 5799999988766543321 11111122211 10000000 0 0000 011123
Q ss_pred HhhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 419 LILSKAPVWALII-SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 419 ~ll~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.++++++.+...+ ..++..+..+....|.|.|+++.+|++......+.....+..+++.++.|+++||++||+..+
T Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~ 320 (438)
T PRK09952 244 ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI 320 (438)
T ss_pred HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 3566766666544 445556677788889999998888988876655666667778888999999999999998654
No 47
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=3.6e-24 Score=222.46 Aligned_cols=267 Identities=15% Similarity=0.219 Sum_probs=220.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
.++.+.+..+..++..+......+.+|.+.+++|.++.+++++.+++.++..++.+++|+++||+|||+++.++.++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 35566666666666667777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 009469 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~ 364 (534)
+.+++.+++ +++.+++.|++.|++.+...+....++.|+++++++++++++...+..+|..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 999888887 889999999999999888888888899999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 444 (534)
.|++.+++.++..++.....++.++.+++.. + ....++.+++++.++...+..+....+...+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADARRT-R---------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFE 227 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccchh-H---------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999887776655554444454332211110 0 11345667888888877766666666666667
Q ss_pred HHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS 489 (534)
Q Consensus 445 ~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~ 489 (534)
.+.+.++++.+|++..+.+++.....++.+++.++.+++.||+++
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888988889999999998888888888999999999999883
No 48
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=9.9e-27 Score=232.51 Aligned_cols=306 Identities=18% Similarity=0.251 Sum_probs=243.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
.+.++.+++.++..++..++.+.+....+.+++.||++++..|++.+.+.+.+.+++|+.|+++||+.||+++.+|..+|
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 34477888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG- 361 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g- 361 (534)
.++.+.++++. .+|+++++|.+.|+|.+...++++++++|.||..+|++++++++.+..+|..+|.+++..+....+
T Consensus 109 ~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 109 TLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999997 799999999999999999999999999999999999999999999999999999999999988766
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHH
Q 009469 362 WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTF 441 (534)
Q Consensus 362 w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~ 441 (534)
|||.|++.+++.+++.++.+.+.+++++...+....+.. ..........+.+.+.+++.+....+......+...
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~G 261 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIG 261 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc-----CCCCccchHHHHHHHHccCceeeehHHHHHHHHhcc
Confidence 999999999999999999888888766542221111100 011112223455666676777777777776666666
Q ss_pred HHHHHHHHHHHHh---hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHHHHHh
Q 009469 442 ILLTWMPTYYNQV---LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK--GLSITAVRKIMQSIGFLGPAFFLTQ 515 (534)
Q Consensus 442 ~~~~~lp~~~~~~---~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r--~~~i~~~~~~~~~~~~~~~~~~l~~ 515 (534)
.+..|.|.+.... .|++..+..++..+..+++.+|.+++|.++||+.+. +............++..+.+.++..
T Consensus 262 s~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~ 340 (493)
T KOG1330|consen 262 SLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL 340 (493)
T ss_pred ccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH
Confidence 6666666665443 355666777788888899999999999999996432 2122222334444444444444433
No 49
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.94 E-value=8.9e-25 Score=231.44 Aligned_cols=288 Identities=18% Similarity=0.247 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCC--------cchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWN--------STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 277 (534)
+...+++.+..++..++...+....+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 44444445555666777778888888888888777 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc-cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHH---
Q 009469 278 GVIWWSVATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS--- 353 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~--- 353 (534)
+.++++++.+++.+.. ..+++.+++.|++.|++.+...+...++++|++|+++|++++++++.+..+|.+++++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998886654 224568999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCCCC-----ChhhhHHHHhhhhCCCccccc-----------------
Q 009469 354 PILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE-----DPELRAEEKRHILGGSISKEA----------------- 411 (534)
Q Consensus 354 ~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----------------- 411 (534)
..+....+||+.|++.++..++..+. ..+.++.+.. ..+...+..............
T Consensus 187 ~~~~~~~~w~~~f~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (481)
T TIGR00879 187 VSLNNTLGWRIPLGLQLIPAGLLFLG-LFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKR 265 (481)
T ss_pred hcCCCCccHHHHHHHHHHHHHHHHHH-HhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 66667789999999865555444333 3334443210 100000000000000000000
Q ss_pred cccccHHHhhc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 412 VSVIPWKLILS------KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD 485 (534)
Q Consensus 412 ~~~~~~~~ll~------~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~d 485 (534)
.....++.+++ .+.++...+..+...........+.|.++++ .|++..+++.+..+..++.+++.++.|++.|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 344 (481)
T TIGR00879 266 SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD 344 (481)
T ss_pred hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001222222 2223333333333333344556677777766 6999988899999999999999999999999
Q ss_pred HhhcccchHH
Q 009469 486 TLVSKGLSIT 495 (534)
Q Consensus 486 r~g~r~~~i~ 495 (534)
|+++|+....
T Consensus 345 ~~~~~~~~~~ 354 (481)
T TIGR00879 345 RFGRRPLLLI 354 (481)
T ss_pred HhcchHHHHH
Confidence 9999986553
No 50
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=8.9e-24 Score=220.36 Aligned_cols=270 Identities=17% Similarity=0.199 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH
Q 009469 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l 288 (534)
+.+++..++..++.....++..|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44555566667777788889999999999999999999999999999999999999999999999999999999999888
Q ss_pred Hhhhc-cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc--------
Q 009469 289 TPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------- 359 (534)
Q Consensus 289 ~~~~~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-------- 359 (534)
+..+. ..+++.+++.|++.|+|.+...+....++.++.|+++|++.+++.+....+|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 65432 227889999999999999999999999999999999999999999999999999999999887532
Q ss_pred ------------------cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhh
Q 009469 360 ------------------FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLIL 421 (534)
Q Consensus 360 ------------------~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 421 (534)
.+||++|++.+++.++..++..+. +.++.+.++ + ++ .......+.++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~p~~~~~~--~-~~-----------~~~~~~~~~~~ 229 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KMPALNHSD--A-KQ-----------ISFSASLSRLA 229 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCccc--c-cc-----------ccchhhHHHHH
Confidence 359999998888776655444322 211111100 0 00 00011345678
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 422 SKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL-KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 422 ~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~-g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
++|.++...+..+++........++++.|.++.. +.+...++........+..+|+++++++.||+++|+.+
T Consensus 230 ~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l 302 (410)
T TIGR00885 230 RIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL 302 (410)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 8999999888888888888888899999997632 34445556667777788899999999999999988754
No 51
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=9.4e-25 Score=228.65 Aligned_cols=279 Identities=19% Similarity=0.312 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHH-HhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMS-IAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
.++..++..++....+...++ ..+..+.++.+....+.+++.++++++++++.+++|.+.||++..+.+....+++.+.
T Consensus 45 ~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~ 124 (495)
T KOG2533|consen 45 FILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLF 124 (495)
T ss_pred HHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHH
Confidence 344445555555556555444 3344467889999999999999999999999999999999999888888888888888
Q ss_pred HHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh------cc
Q 009469 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI------QK 359 (534)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~------~~ 359 (534)
.++..... |++.+++.|++.|+..+..+|....+++.||.+++|++.+|++++...+|.++|.+++..+. ..
T Consensus 125 ~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 125 GFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 87777777 89999999999999999999999999999999999999999999999999999999999873 34
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHH-----hhh-hCCCccccccccccHHHhhcchhHHHHHHHH
Q 009469 360 FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK-----RHI-LGGSISKEAVSVIPWKLILSKAPVWALIISH 433 (534)
Q Consensus 360 ~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~ 433 (534)
.||||.|++.+++.++..++.++..|+.|.+..-..++++ +.. .......+..+...+++++++|.+|.+.+..
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~ 282 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCY 282 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHH
Confidence 6899999999999999999888888888774433333321 111 1111111225667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 434 FCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL 487 (534)
Q Consensus 434 ~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~ 487 (534)
++.....+++.+|+|.|+++..|++..++..+..+..++++++.++.|+++||+
T Consensus 283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 999999999999999999996679999999999999999999999999999995
No 52
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.93 E-value=7.7e-24 Score=226.74 Aligned_cols=287 Identities=17% Similarity=0.260 Sum_probs=209.7
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
++|+.+..+++..++..++....++.+|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 45777788888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
++.+++++++ +++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+.++||
T Consensus 97 ~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 97 VGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHH-hhhhCCCccccccccccH----------HHhhc----------
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEK-RHILGGSISKEAVSVIPW----------KLILS---------- 422 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~ll~---------- 422 (534)
+.|++.++..++ .++.....++.++..+....... ....+.....+. ..... ...+.
T Consensus 175 ~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (496)
T PRK03893 175 ALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEH-RIINILLTLAAAAALWFCFAGNLQNAAIVA 252 (496)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHhcchh-HHHHHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 999864433322 22222222222110000000000 000000000000 00000 00000
Q ss_pred --------------------c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHH
Q 009469 423 --------------------K-APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG 481 (534)
Q Consensus 423 --------------------~-~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g 481 (534)
+ +....+.+..++.....+....++|.|+++.+|++..+++++.+...++.+++.++.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g 332 (496)
T PRK03893 253 VLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGG 332 (496)
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000011111111123456889999877899999999999999999999999999
Q ss_pred HHHHHhhcccchH
Q 009469 482 WIADTLVSKGLSI 494 (534)
Q Consensus 482 ~l~dr~g~r~~~i 494 (534)
++.||+++|+..+
T Consensus 333 ~l~dr~g~~~~~~ 345 (496)
T PRK03893 333 FLGDWLGTRKAYV 345 (496)
T ss_pred HHHHHhcchHHHH
Confidence 9999999987544
No 53
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=1e-23 Score=217.10 Aligned_cols=261 Identities=14% Similarity=0.096 Sum_probs=203.7
Q ss_pred HHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHH-HHHHHHHHHHHHHhhh
Q 009469 215 AFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVA 292 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~g~~~~~i~~~l~~~~ 292 (534)
..++..+......+.+|. +.+++|.+..++|++.+++.+...+.+++.|+++||+|||+.++ .+.++.+++.++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 355666666777777776 56889999999999999999999999999999999999988765 4566666677777887
Q ss_pred ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhH--HHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHH
Q 009469 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRS--LAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 370 (534)
Q Consensus 293 ~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~--~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~ 370 (534)
+ +++.+++.|++.|.+.+...+...+++.++.|+++|+.+ .++...+.++|.++||++++.+.+.+|||+.|++.+
T Consensus 85 ~--~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 85 R--NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred c--hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 7 788888899999888777888888889999887777654 578888889999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 371 SLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTY 450 (534)
Q Consensus 371 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~ 450 (534)
++.++..++.++..++.++..+... . ..+.+..++++.++.+.+..++..........++|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGAL--T---------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLL 225 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCccccc--C---------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 8777666666555555433211100 0 0123345667777766666665555555666778999
Q ss_pred HHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 451 YNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 451 ~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+++.+|.++.+.+.+.....+..+++.++.|++.||+++|+...
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 269 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLML 269 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHH
Confidence 88888999999998888777788888999999999999997544
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.93 E-value=1.5e-23 Score=216.95 Aligned_cols=262 Identities=16% Similarity=0.104 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH
Q 009469 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l 288 (534)
+...++..++.........+.+|.+.+++|.+..++|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666777788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 009469 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (534)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i 368 (534)
+++++ +++.++++|++.|++.+...+...+.+.+..++++|+++++++..+..+|..+||.+++.+.+...|.. .+.
T Consensus 88 ~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~-~~~ 164 (381)
T PRK03633 88 LGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL-PWV 164 (381)
T ss_pred HHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchH-HHH
Confidence 88888 899999999999999998888888888899999999999999999999999999999999877543332 232
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
.+.+......+. .. +.+++..++ + +..++++.++++.++......++..........++|
T Consensus 165 ~~~~~~~~~~~~-~~-~~~~~~~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 224 (381)
T PRK03633 165 TGLVLAAILPLL-FT-RILNQQAEN----H--------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMP 224 (381)
T ss_pred HHHHHHHHHHHH-Hh-cccCCCCCC----C--------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222211111 11 111111000 0 012345567788777665555555555666777899
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.|+++ .|.+....+.+.+...++.++++++.|++.||+++|+.+.
T Consensus 225 ~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~ 269 (381)
T PRK03633 225 LYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLR 269 (381)
T ss_pred HHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHH
Confidence 99987 6999999999999999999999999999999999987544
No 55
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=7.2e-24 Score=225.92 Aligned_cols=289 Identities=17% Similarity=0.234 Sum_probs=203.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhh--------CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF--------NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG 276 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~ 276 (534)
.++.++++.+..+..+++...+++..+.+.+.+ +.+..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 355666666777888888889999888888877 888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh---------cc-CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHH
Q 009469 277 FGVIWWSVATVLTPVA---------AR-IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGS 346 (534)
Q Consensus 277 ~g~~~~~i~~~l~~~~---------~~-~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~ 346 (534)
++.++++++.++++++ ++ ..++.++++|+++|++.|...+...++++|++|+++|++++++...+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999999888877753 11 1246788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh--------cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCCh-hhhHHHH---hhhhCCCcccccccc
Q 009469 347 VTGLAVSPILI--------QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP-ELRAEEK---RHILGGSISKEAVSV 414 (534)
Q Consensus 347 ~igp~i~~~l~--------~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~ 414 (534)
++++++++.+. +.+|||+.|++.+++.++..+. .+..++.++... +.+.++. .......... ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~ 247 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA-TQAL 247 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH-HHHH
Confidence 99988876653 3568999999887777665544 344555442100 0000000 0000000000 0000
Q ss_pred ccHHHhhc-----chhHH-----HH----HHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHH
Q 009469 415 IPWKLILS-----KAPVW-----AL----IISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 480 (534)
Q Consensus 415 ~~~~~ll~-----~~~~~-----~~----~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~ 480 (534)
...+..++ .+.++ .+ ....+....+.+...++.|.+..+ .|++.....+......+..+++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~ 326 (479)
T PRK10077 248 QEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLA 326 (479)
T ss_pred HHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 01111111 01110 00 111112222233445666777766 68888777777778888999999999
Q ss_pred HHHHHHhhcccchHHH
Q 009469 481 GWIADTLVSKGLSITA 496 (534)
Q Consensus 481 g~l~dr~g~r~~~i~~ 496 (534)
++++||+|+|++++.+
T Consensus 327 g~l~dr~g~r~~~i~~ 342 (479)
T PRK10077 327 IMTVDKFGRKPLQIIG 342 (479)
T ss_pred HHHHHHhcChHHHHHh
Confidence 9999999999865543
No 56
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=9.6e-24 Score=216.12 Aligned_cols=248 Identities=12% Similarity=0.169 Sum_probs=199.9
Q ss_pred hhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
.....+++.+|.+.+++|++..+++++.+++.++..++.++.|+++||+|||+++.++.++.+++.+.+ ..+ +.+.+
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l 90 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALL 90 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHH
Confidence 334567889999999999999999999999999999999999999999999999999998888887776 555 78888
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc--CchHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~--gw~~~f~i~~~~~~i~~i 378 (534)
++.|++.|++.+...+....++.+++| ++|++++++++.+..+|..+++.+++.+.+.. +||+.|.+.+++.++...
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 169 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL 169 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999888888888999995 68999999999999999999999999888765 399988877655443332
Q ss_pred HHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 009469 379 LWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN 458 (534)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s 458 (534)
... ++.+++++... .......++++++|.++...+..++....++....|+|.|+++ .|++
T Consensus 170 ~~~---~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~ 230 (355)
T TIGR00896 170 AWI---PQVRRRVAANQ---------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGAS 230 (355)
T ss_pred HHh---hhhccccCCCC---------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 222 11111110000 0001224457788888888777777777788888999999987 6999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 459 LTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 459 ~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
..+.+.+.+...++.++++++.|++.||+++|+
T Consensus 231 ~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~ 263 (355)
T TIGR00896 231 AATAGSLLALMQLAQAASALLIPALARRVKDQR 263 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Confidence 999999999999999999999999999995544
No 57
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=2.3e-23 Score=216.76 Aligned_cols=263 Identities=17% Similarity=0.186 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
++.+....+..++..++..+..+.+|. +.+++|.+..++|++.+++.+++.+++++.|+++||+|||+++.++.+++++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 344555666667777777788888887 5788999999999999999999999999999999999999999999998887
Q ss_pred HHHHHhhhc---c---CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 285 ATVLTPVAA---R---IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 285 ~~~l~~~~~---~---~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
+.+++.++. + .++..+++.|+++|++.+...+....++.+++|+++|++++++...+..+|.++|+.+++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 766554432 1 1355789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHH
Q 009469 359 KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 438 (534)
Q Consensus 359 ~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 438 (534)
.+||++.+++.+++.++..+.. ...++.+++ + .+ ..++++.++ .++.......+..+
T Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~-~~-----------------~~~~~~~~~--~~~~~~~~~~~~~~ 230 (399)
T PRK05122 174 WGGLAGLGLLIMLLALLGLLLA-RPRPAVPPV--K-GE-----------------RLPFRRVLG--RVWPYGMGLALASI 230 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHH-hcCCCCCCC--C-cc-----------------chhHHHHHH--HHHHHHHHHHHHHH
Confidence 9999998877665544332221 111111110 0 00 011222222 22333333344455
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+......+++.|+.+ .|+ ...+.......++.++++++.|++.||+++|+...
T Consensus 231 ~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 283 (399)
T PRK05122 231 GFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAI 283 (399)
T ss_pred HHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 566677788888876 465 34566677788888999999999999999887543
No 58
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=1.5e-22 Score=210.88 Aligned_cols=267 Identities=16% Similarity=0.160 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcch-----hHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTT-----VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
...++..++.........+++|.+.+++|.+..+ .|++.+++.++..++.+++|+++||+|||++++++.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3444556666777778888999999999988654 48899999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 009469 285 ATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (534)
Q Consensus 285 ~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~ 364 (534)
+.+++++.+ +++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.+++|.+++.+.+..+|++
T Consensus 97 ~~~~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLAQ--NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173 (408)
T ss_pred HHHHHHHHh--hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 988888877 78899999999999865 467778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHH-HHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWAL-IISHFCHNWGTFIL 443 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~l~~~~~~~~~~~~ 443 (534)
.|++.+++.++..++.+...++++++.++.+..+. .+....+++++++.. .+..++........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHM---------------REVVTSLKNPKLVLSLFVTTLIIQVATGSI 238 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccchhhhHH---------------HHHHHhCcCCchHHHHHHHHHHHHHHHHHH
Confidence 99998887776666655555544322111110000 112234566665543 33334444445556
Q ss_pred HHHHHHHHHHhhCCChh---hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 444 LTWMPTYYNQVLKFNLT---ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~---~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+++.|..+..+.... ..+.+..+..++.+++.++.|++.||+++|+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILI 292 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Confidence 67778888775332221 2455566667888889999999999999987644
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.92 E-value=3.5e-23 Score=215.01 Aligned_cols=266 Identities=12% Similarity=0.068 Sum_probs=200.5
Q ss_pred HHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh
Q 009469 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA 292 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~ 292 (534)
+...++..+.........+.+.++++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~ 88 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG 88 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH
Confidence 34455555555555666667788999999999999999999999999999999999999999999999999888877776
Q ss_pred ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHH
Q 009469 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (534)
Q Consensus 293 ~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~ 372 (534)
. +. ++.|+++|++.+...|+..+++.|++|+++|++++|+......+|.++||.++|++.+.. |+..+.+.+..
T Consensus 89 ~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~ 162 (393)
T PRK11195 89 I--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALI 162 (393)
T ss_pred H--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 5 33 678999999999999999999999999999999999999999999999999999998853 77666665554
Q ss_pred HHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (534)
Q Consensus 373 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~ 452 (534)
.++..+. ....++.+.+.+..+.+..... ......++.++++|.+....+..++...........+|.|++
T Consensus 163 ~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T PRK11195 163 YLLAALF-NLFIPRLGARRPGQSWNPIALL--------RDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAP 233 (393)
T ss_pred HHHHHHH-HhcCCCCcccccccCCCHHHHH--------HHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333332 2333333221111000000000 000112456777877665555554545555566667788888
Q ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 453 ~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
+.+|.++.+.|++.....++.+++.++.+++.||.++++..
T Consensus 234 ~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~ 274 (393)
T PRK11195 234 VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL 274 (393)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH
Confidence 88999999999999999999999999999999988877643
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=8.1e-23 Score=207.27 Aligned_cols=242 Identities=30% Similarity=0.543 Sum_probs=218.2
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh
Q 009469 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~ 291 (534)
+.+..+..........+..+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 34455667778888888999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHH
Q 009469 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (534)
Q Consensus 292 ~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~ 371 (534)
.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.+..+|++.+++.++
T Consensus 84 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 84 AS--SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred hc--cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 87 8899999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (534)
Q Consensus 372 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~ 451 (534)
+.++..++..... |.++...+..++..........+.|.+.
T Consensus 162 ~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (352)
T cd06174 162 LGLLLALLLLFLL---------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYL 202 (352)
T ss_pred HHHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7777666554442 3567777778888888888999999999
Q ss_pred HHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc-chH
Q 009469 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG-LSI 494 (534)
Q Consensus 452 ~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~-~~i 494 (534)
.+.+|.+..+.+.+.....++.+++.++.+++.||+++|+ ...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 246 (352)
T cd06174 203 QEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLL 246 (352)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9977999999999999999999999999999999999987 433
No 61
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2e-23 Score=220.78 Aligned_cols=285 Identities=19% Similarity=0.254 Sum_probs=237.4
Q ss_pred chHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
.-|.+++..++..+........++.+.+.+.++++.+..+++|+.++......+..|+.+.+.||+|.|.+.++|.++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 34889999988888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCh-HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 284 VATVLTPVAARIGL-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 284 i~~~l~~~~~~~~~-~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
++.++.++++ ++ ..++...++.|+|.|..+.+...++..|| +++|+.|.|+..++.++|.++-|.+..++.+.+||
T Consensus 123 ~g~~lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~ 199 (509)
T KOG2504|consen 123 LGLLLSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGW 199 (509)
T ss_pred HHHHHHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCc
Confidence 9999999999 55 45567889999999999999999999999 88999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChh--------------------hhHHH------------HhhhhC-CCccc
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPE--------------------LRAEE------------KRHILG-GSISK 409 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~--------------------~~~~~------------~~~~~~-~~~~~ 409 (534)
|+.+++.+.+.+-.++......|..+...+. ..... ...... .....
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWR 279 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcccc
Confidence 9999999998877777766666532222111 00000 000000 00000
Q ss_pred -ccccccc---HHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 410 -EAVSVIP---WKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD 485 (534)
Q Consensus 410 -~~~~~~~---~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~d 485 (534)
...+... ..++++++.++.+++...+...+++....++|.|..+ +|++..+++.+.++.++..++++++.|+++|
T Consensus 280 ~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD 358 (509)
T KOG2504|consen 280 NSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLAD 358 (509)
T ss_pred ccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcC
Confidence 0111111 2578899999999999999999999999999999996 7999999999999999999999999999999
Q ss_pred Hhhcccc
Q 009469 486 TLVSKGL 492 (534)
Q Consensus 486 r~g~r~~ 492 (534)
+...++.
T Consensus 359 ~~~~~~~ 365 (509)
T KOG2504|consen 359 KPGIRAL 365 (509)
T ss_pred ccccchH
Confidence 9885543
No 62
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=3.3e-23 Score=216.96 Aligned_cols=263 Identities=14% Similarity=0.106 Sum_probs=203.3
Q ss_pred HHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh---h
Q 009469 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---A 292 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~---~ 292 (534)
.++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++.+. .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 3445555666777888888899999999999999999999999999999999999999999888887776655442 1
Q ss_pred ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHH
Q 009469 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (534)
Q Consensus 293 ~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~ 372 (534)
...+++.+++.|++.|++.+...++..+++.+++|+++|+++.++......+|..+||.+++.+.+..+|+|.|++.++.
T Consensus 106 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~ 185 (417)
T PRK10489 106 PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAG 185 (417)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 22267888899999999988888888999999999999999999999999999999999999999989999999887776
Q ss_pred HHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 373 GSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYN 452 (534)
Q Consensus 373 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~ 452 (534)
.++..++.+. .++.+++.++... . .......++.++++|.++...+..++... ......++|.|++
T Consensus 186 ~~~~~~~~~~-l~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~ 251 (417)
T PRK10489 186 TFITLLPLLR-LPALPPPPQPREH-P-----------LRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALAD 251 (417)
T ss_pred HHHHHHHHHh-CCCCCCCCccccc-c-----------hHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHH
Confidence 6655544433 3332221110000 0 00011235567778777666555444332 3556778899999
Q ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 453 ~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
+.+|.+....+++.+...++.+++.++.+++.||.++++.
T Consensus 252 ~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~ 291 (417)
T PRK10489 252 EVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL 291 (417)
T ss_pred hccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH
Confidence 8889999999999999999999999999999998665543
No 63
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=1.3e-22 Score=210.53 Aligned_cols=258 Identities=16% Similarity=0.214 Sum_probs=185.3
Q ss_pred HHHHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH
Q 009469 211 LCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~ 289 (534)
.+.+..++.........+.+|. +.+++|.+..++|++.+++.++..++++++|+++||+|||+++.++.++..++.+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 19 RIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 3334445555566667777775 578999999999999999999999999999999999999999999988777655432
Q ss_pred h---hhc---cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 290 P---VAA---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 290 ~---~~~---~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
. +.+ ..+++.+++.|+++|++.+...+...+++.+++|+++|++++++...+..+|.++||++++++.+.+||+
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 178 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFA 178 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 2 211 1267889999999999999888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
+.+.+..++.++.... ....++.+++++. + .+.++.++ .++...+..++...+....
T Consensus 179 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-------------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 235 (392)
T PRK12382 179 ALALTTMVLPLLAWAF-NGTVRKVPAHAGE-R-------------------PSLWSVVG--LIWKPGLGLALQGVGFAVI 235 (392)
T ss_pred HHHHHHHHHHHHHHHH-HHhccCCCCCccc-C-------------------chHHHHHH--HHHHhHHHHHHHHHHHhHH
Confidence 8776554443322221 1111211110000 0 01111211 1222222333334455566
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+.|.|+++ .+++. .+.......++.++++++.|++.||+++|+...
T Consensus 236 ~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 283 (392)
T PRK12382 236 GTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAI 283 (392)
T ss_pred HHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehH
Confidence 7788888877 46653 455666677788899999999999999988654
No 64
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=3.1e-22 Score=214.65 Aligned_cols=291 Identities=15% Similarity=0.147 Sum_probs=204.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhh-----CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF-----NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 277 (534)
+.++..+.++.++.+..+++...++...+.+..++ ..+..+.+++.+.+.++..++.+++|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 34567777788888899999999999888876643 3445677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccC----ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 009469 278 GVIWWSVATVLTPVAARI----GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS 353 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~~~----~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~ 353 (534)
+.+++.++.++++++++. +++.++++|++.|++.|...+....+++|++|+++|++++++.+....+|.++++.++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888887621 1678999999999999999999999999999999999999999999999999999888
Q ss_pred HHhhc-----------------------ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCC---Chhh-h-HHH-HhhhhC
Q 009469 354 PILIQ-----------------------KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE---DPEL-R-AEE-KRHILG 404 (534)
Q Consensus 354 ~~l~~-----------------------~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~---~~~~-~-~~~-~~~~~~ 404 (534)
..+.. ..+||+.+.+.++..++. .+..+..||+|+. +.+. + ..+ ......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 76532 247999997666655543 3334555666542 1111 0 000 000000
Q ss_pred -----CCcc------ccccccccHHHhhcc---hhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHH--
Q 009469 405 -----GSIS------KEAVSVIPWKLILSK---APV----WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL-- 464 (534)
Q Consensus 405 -----~~~~------~~~~~~~~~~~ll~~---~~~----~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~-- 464 (534)
...+ .++....++++++++ ++. +...+..++..+.+++...|.|.++++ .|++...++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~ 329 (502)
T TIGR00887 251 VKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNA 329 (502)
T ss_pred cccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhH
Confidence 0000 000011246666642 222 112222333444556667778998876 6886543221
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 465 ----------FCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 465 ----------l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
...+..++.+++.++.++++||+|||++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~ 370 (502)
T TIGR00887 330 YEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHH
Confidence 2333445667788899999999999986554
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.92 E-value=3.9e-22 Score=207.61 Aligned_cols=254 Identities=13% Similarity=0.105 Sum_probs=194.8
Q ss_pred HHHHhhhhHHHHhHH-HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccC
Q 009469 217 LLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI 295 (534)
Q Consensus 217 ~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~ 295 (534)
++.....+...++++ ++.+++|++..++|++.+.+.++..+..+++|+++||+|||+++.++.++.+++.+++.+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~-- 97 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH-- 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc--
Confidence 333344444444544 46789999999999999999999999999999999999999999999999999999998887
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i 375 (534)
+++.+++.|++.|++.+...++..+++.+++|+++|++++|+......+|..+||++++++. .+||++.|++.+++.++
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVL 176 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 78889999999999998888899999999999999999999999999999999999999998 78999999988877666
Q ss_pred HHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 376 WFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVL 455 (534)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~ 455 (534)
..++.....++.++. +.. . .....++.++++++++...+..+...........++|.|+++.
T Consensus 177 ~~i~~~~~~~~~~~~-~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 238 (400)
T PRK11646 177 AAAFNAWLLPAYKLS-TVR-T---------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI- 238 (400)
T ss_pred HHHHHHHhCCccccc-ccc-h---------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-
Confidence 555444443332111 000 0 0012456678888887766665554444444566889999885
Q ss_pred CCChhhhHHHHHHHHHHHHHHHHHHHHHHH-Hhhccc
Q 009469 456 KFNLTESGLFCVLPWLTMAVFANMGGWIAD-TLVSKG 491 (534)
Q Consensus 456 g~s~~~~g~l~~~~~~~~iig~~i~g~l~d-r~g~r~ 491 (534)
+.++.+.+.+.+...++.+++....+++.| |++.++
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~ 275 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH 275 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 447778888887777766655555555555 454443
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.91 E-value=1.9e-22 Score=208.69 Aligned_cols=263 Identities=10% Similarity=0.017 Sum_probs=200.8
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHH-HHHHHH-HHH
Q 009469 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVI-WWSVAT-VLT 289 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~-~~~i~~-~l~ 289 (534)
+.+.++..........+++|.+.+++|.+..++|++.+++.+...++++++|+++||+||+........ ...+.. ..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 334455666667788889999999999999999999999999999999999999999998543322111 111111 223
Q ss_pred hhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHH
Q 009469 290 PVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF 369 (534)
Q Consensus 290 ~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~ 369 (534)
..++ +++.+++.|+++|.+.+...+...++..++ +++|++++|......++|.+++|++++.+.+.+|||+.|++.
T Consensus 89 ~~~~--~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 89 AGAH--NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred Hhhh--hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 3445 788999999999998888888888887654 578899999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (534)
Q Consensus 370 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~ 449 (534)
+++.++.. +.+...++.+++++. ++ + +......++.++|+|++|.+.+..++...+......+.|.
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~~-~~-~-----------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 165 TAGLAFML-IGFLIKPTIPPKDAI-PE-D-----------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred HHHHHHHH-HHHHcCCCCCCCccc-cc-c-----------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65533322 222222221111110 00 0 0011124667899999999999999888888899999999
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 450 ~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
|+++ .|.+..+.+++..+..++.+++.++.+++.||++.|+.+
T Consensus 231 ~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l 273 (382)
T TIGR00902 231 YWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL 273 (382)
T ss_pred HHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH
Confidence 9987 799999999999998899999999999999999998743
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.91 E-value=2.1e-22 Score=207.86 Aligned_cols=262 Identities=20% Similarity=0.237 Sum_probs=198.0
Q ss_pred HHHHhhhhHHHHhHHHHHhhhC--CCcchhHHHHHH-----HHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH
Q 009469 217 LLCNMDRVNMSIAILPMSKEFN--WNSTTVGLIQSS-----FFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (534)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g--~s~~~~g~i~s~-----~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~ 289 (534)
+..+++.+.++...+.+.+++. .+..+.+++.+. ..++..+++++.|+++||+|||+++.++.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3456777778887777766654 445556654443 333445688999999999999999999999999999999
Q ss_pred hhhccCChH--------HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----
Q 009469 290 PVAARIGLP--------FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI---- 357 (534)
Q Consensus 290 ~~~~~~~~~--------~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~---- 357 (534)
++++ ++. .+++.|+++|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9887 443 57889999999999999999999999999999999999999999999999998877654
Q ss_pred ----cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchh--HHHHHH
Q 009469 358 ----QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAP--VWALII 431 (534)
Q Consensus 358 ----~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~--~~~~~l 431 (534)
+.++||+.|++.+++.++...+. ...++.++..+ .+++ ++....++++.+++++ ++...+
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYLR-RNLEETPVFEK---AQEK----------HKKKRGPIRETLTKHRKPFLLGLG 226 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHH---HHhc----------cccccCCHHHHHHhchHHHHHHHH
Confidence 35789999987766555433322 22222211100 0000 0011234555666655 777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 432 SHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 432 ~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..++.....+....++|.|+++.+|.+..+.+.+.....++.+++.++.|++.||+++|+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 289 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLI 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 777777777888889999998878999999999999999999999999999999999987543
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.91 E-value=3.6e-22 Score=206.69 Aligned_cols=256 Identities=11% Similarity=0.110 Sum_probs=195.1
Q ss_pred HHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCc----hHHHHHHHHHHHHHHHHhh
Q 009469 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK----PVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr----~~l~~g~~~~~i~~~l~~~ 291 (534)
++........+.+++|.+.+++|.+..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344445567788888999999999999999999999999999999999999999994 2332222221 1122222
Q ss_pred hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHH
Q 009469 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (534)
Q Consensus 292 ~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~ 371 (534)
.+ +++.+++.|++.|++.+...+...+++.++ .++|+++++.......+|.++||++++++.+++|||..|++.++
T Consensus 91 ~~--~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 AH--SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred cc--cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 34 788899999999999888888888887776 45688889999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (534)
Q Consensus 372 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~ 451 (534)
..++..+.. ...++.+++.++ ++. .......+++++++|.+|.+.+..++..........++|.|+
T Consensus 167 ~~~~~~~~~-~~~~~~~~~~~~---~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (382)
T PRK11128 167 GVASMLLGQ-LLRPTIMPQGES---RQQ----------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW 232 (382)
T ss_pred HHHHHHHHH-HccCCCCCcccc---ccc----------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 544443332 222322111100 000 000123578899999999988888877777777888889999
Q ss_pred HHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 452 ~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
++ .|++..+.+.+.....++.++..++.+++.||+++++.
T Consensus 233 ~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 272 (382)
T PRK11128 233 QA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL 272 (382)
T ss_pred HH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 77 79999999999998889999999999999999999875
No 69
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=3.2e-22 Score=207.89 Aligned_cols=260 Identities=12% Similarity=0.124 Sum_probs=200.8
Q ss_pred HHHHHHhhhhHHHHhHH-HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 215 AFLLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
..++.........+.++ ++.+++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++.+
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~ 94 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN 94 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh
Confidence 44445555555555555 46678999999999999999999999999999999999999999999999999988888887
Q ss_pred cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHH
Q 009469 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 373 (534)
Q Consensus 294 ~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~ 373 (534)
+++.+++++++.|.+.+...+...+++.|.+|+++|++++++.....++|.++||++++++.. .+|++.|++.+++.
T Consensus 95 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~ 171 (395)
T PRK10054 95 --NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICS 171 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHH
Confidence 788888888888887777788889999999999999999999999999999999999999875 79999999888777
Q ss_pred HHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 374 SIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ 453 (534)
Q Consensus 374 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~ 453 (534)
++..++.....++.++++++.+. + ....+..+++|.++.+.+..++..+.......+.+.|...
T Consensus 172 ~i~~i~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 235 (395)
T PRK10054 172 AFPLVFIQIWVQRSEKAIATETG-S---------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMV 235 (395)
T ss_pred HHHHHHHHHHHhccccccccchh-h---------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 66655444433332221111000 0 0113557888999888888777777766666677777654
Q ss_pred h--hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 454 V--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 454 ~--~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
. .+.+....+.+.....+..+......|++.||.++|+.+
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 277 (395)
T PRK10054 236 VADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM 277 (395)
T ss_pred hcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH
Confidence 3 345556667777777777777778889999999888643
No 70
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=7.2e-22 Score=202.26 Aligned_cols=256 Identities=13% Similarity=0.068 Sum_probs=196.6
Q ss_pred hHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----CCchH-HHHHHHHHHHHHHHHhhhcc-CC
Q 009469 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-----GGKPV-LGFGVIWWSVATVLTPVAAR-IG 296 (534)
Q Consensus 224 ~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i~~~l~~~~~~-~~ 296 (534)
..+++..|.+.+++|+|.+++|+.... .+...+ .+++|+++||+ |||+. ++.+.++.++..+.+++... .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456678899999999999999999755 455444 89999999998 89886 56777777777666666631 24
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC--------chHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG--------WPSVFYS 368 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g--------w~~~f~i 368 (534)
.+.+.+..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+....| ||+.|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 55667777788888888889999999999999999999999999999999999999999998888 9999998
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchh---HHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAP---VWALIISHFCHNWGTFILLT 445 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~---~~~~~l~~~~~~~~~~~~~~ 445 (534)
.+++.++..++.++..+++.+..+.. +++... ....++.+++++. ++.+.+..++...+.+....
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASVP-KPLTQA-----------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcccccc-hhHHHH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88877665554444444432211111 000000 1124566777765 77777777777788888889
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHH-HHHHHHHHHHHHHHHHhhcccchH
Q 009469 446 WMPTYYNQVLKFNLTESGLFCVLPW-LTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 446 ~lp~~~~~~~g~s~~~~g~l~~~~~-~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
++|.|+++ +|++..+.+.+..... ++.+++.+++|++.||+|+|+.+.
T Consensus 231 ~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~ 279 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALL 279 (356)
T ss_pred HHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 99999998 8999999988877665 577899999999999999887544
No 71
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.91 E-value=1.2e-21 Score=203.48 Aligned_cols=257 Identities=17% Similarity=0.108 Sum_probs=180.9
Q ss_pred HHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhCCchHH-HHHHHHHHHHHHHHhhh
Q 009469 216 FLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVL-GFGVIWWSVATVLTPVA 292 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l-~~g~~~~~i~~~l~~~~ 292 (534)
.++.......+.+.++. +.+++|++..++|++.+...+ +..++++++++ .||+|+|+.+ ..+.++.+++.++++++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 44555555556666666 578899999999999876655 55556655555 9999999875 45566666777777777
Q ss_pred ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHH
Q 009469 293 ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER--SRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 370 (534)
Q Consensus 293 ~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r--g~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~ 370 (534)
+ +++.+++.+.+.|...+...+...+++.++.++++| +...++...+.++|.++||++++++.+++|||+.|++.+
T Consensus 103 ~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 103 R--NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred h--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 7 677766665555544456678888888888766655 344578888999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 371 SLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK-APVWALIISHFCHNWGTFILLTWMPT 449 (534)
Q Consensus 371 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~l~~~~~~~~~~~~~~~lp~ 449 (534)
++.++..++.+...|+.+++++.... + .+ . ..++ +..+......++.......+..++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMRKELPLATG-T----------LE-----A---PRRNRRDTLLLFVICTLMWGTNSLYIINMPL 241 (393)
T ss_pred HHHHHHHHHHHhhcCccCCCCccccc-c----------cc-----c---cccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777766666555554322211000 0 00 0 0112 22333333334444455556678999
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 450 ~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
|+++.+|++..+.+.+.....++.+++.++.|+++||+++|+...
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~ 286 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMR 286 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 998888999999998888877888899999999999999987543
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.90 E-value=3.4e-21 Score=205.55 Aligned_cols=269 Identities=16% Similarity=0.169 Sum_probs=205.3
Q ss_pred HHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----CCchH-HHHHHHHHHH
Q 009469 211 LCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-----GGKPV-LGFGVIWWSV 284 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~g~~~~~i 284 (534)
..++..+..+.........+|.+.++.|.+..+++.. +.....+ ++.+++|+++||+ |||+. ++++.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3444455666677788888999999999999999986 3333343 6899999999999 99885 6677777777
Q ss_pred HHHHHhhhc-cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-ccCc
Q 009469 285 ATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGW 362 (534)
Q Consensus 285 ~~~l~~~~~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-~~gw 362 (534)
+.+.+++.. ..+++.+.+.+++.|++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 777776653 23577888899999999999999999999999999999999999999999999999999999998 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHH
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~ 442 (534)
|+.|++.+++.++..+..+. .+++++..+..+. . +.....+++++++++..|...+..++...+...
T Consensus 174 r~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~-~-----------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~ 240 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLL-APEPTDTIPVPKT-L-----------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF 240 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCccccccccc-h-----------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 99999988877666554443 3433221110000 0 000112466677777777776666666666667
Q ss_pred HHHHHHHHHHHhhCCChhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 443 LLTWMPTYYNQVLKFNLTESGLFCV-LPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 443 ~~~~lp~~~~~~~g~s~~~~g~l~~-~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
...+.+.|+.+.+|++..+.+.+.. ...++.+++.+++|+++||+++|+.+.
T Consensus 241 ~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~ 293 (491)
T PRK11010 241 AMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM 293 (491)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 7778888887778999999999874 556899999999999999999887433
No 73
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.90 E-value=7.3e-21 Score=198.29 Aligned_cols=266 Identities=13% Similarity=0.049 Sum_probs=203.2
Q ss_pred HHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----CCch-HHHHHHHHHHHHH
Q 009469 213 FSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-----GGKP-VLGFGVIWWSVAT 286 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-----Grr~-~l~~g~~~~~i~~ 286 (534)
+..++..+.........+|.+.++.|++.+++|++..+... .+..+++|+++||+ |||+ +++++.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 44566777778888889999999999999999999777665 58999999999999 8775 7888888888888
Q ss_pred HHHhhhc-cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchH
Q 009469 287 VLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPS 364 (534)
Q Consensus 287 ~l~~~~~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-~gw~~ 364 (534)
+++++.. ..+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 7777763 224677777878888888888899999999999999999999999999999999999999999886 59999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 444 (534)
.|++.+++.++..+.. ...++++.++++.+. ..+ .....+++++++|.++.+.+..++.........
T Consensus 163 ~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~~-~~~-----------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~ 229 (402)
T PRK11902 163 TYLLMAGLMLAGALTT-LWAPEPEVPARPPRS-LGE-----------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAG 229 (402)
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCcccccccch-hHH-----------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHH
Confidence 9999888776554433 333333221111100 000 012346778899988887777666665544444
Q ss_pred HHHHHHHHHhhCCChhhhHHHHHHHH-HHHHHHHHHHHHHHHHhhcccch
Q 009469 445 TWMPTYYNQVLKFNLTESGLFCVLPW-LTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 445 ~~lp~~~~~~~g~s~~~~g~l~~~~~-~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
.+.+.++.+.+|+++.+.+++..... ++.+++.++++++.||+++|+..
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l 279 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL 279 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 45555666668999999999876654 56889999999999999988753
No 74
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=2.5e-22 Score=215.63 Aligned_cols=257 Identities=19% Similarity=0.154 Sum_probs=191.7
Q ss_pred HhHHHHHhhhCCC---cchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 228 IAILPMSKEFNWN---STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 228 ~~~~~~~~~~g~s---~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
+..+.+.++++++ ..+.+++.+++.++..++.+++|+++||+|||++++++.++.+++.+++++++ +++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 4667889999999 89999999999999999999999999999999999999999999999999988 899999999
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhh
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.+++|.++..+.+ ||+.|++.++..++..+.. +..
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999999877654 9999999888777666555 444
Q ss_pred cCCCCC----ChhhhHHH---H-hhhhC------------CCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 009469 385 YSSPKE----DPELRAEE---K-RHILG------------GSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (534)
Q Consensus 385 ~~~~~~----~~~~~~~~---~-~~~~~------------~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 444 (534)
++.++. .+..+..+ + ..... ............+++++++|.++...+..++..+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 554321 00000000 0 00000 0000001112467788999888777766655554444333
Q ss_pred HHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 445 ~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+.++.+... ++.+.. .......+..+++.++.+++.||+|||+.+.
T Consensus 344 ~~~~~~~~~-~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~ 389 (505)
T TIGR00898 344 YGLVLDLGN-LGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMA 389 (505)
T ss_pred HHHhccccc-cCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 333444433 455432 3334556777889999999999999997544
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=7.4e-21 Score=187.99 Aligned_cols=274 Identities=17% Similarity=0.211 Sum_probs=229.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
...++.+...+++.++......+.+|.+.+.|+++..+.+++...+..++.+++++.|++.+|+|+|+.+++|..+++++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34556666677777888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh-hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Q 009469 286 TVLTPV-AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK----- 359 (534)
Q Consensus 286 ~~l~~~-~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~----- 359 (534)
+.++.- +...++..++++-++.|.|.+...++++.+++...++++-...+.+.+..+++|..+||++++.++.+
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 988853 33347888999999999999999999999999999998899999999999999999999999998872
Q ss_pred --------------cCchHHHHHHHHHHHHHHHHHHHhh-cCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcch
Q 009469 360 --------------FGWPSVFYSFGSLGSIWFALWLKKA-YSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKA 424 (534)
Q Consensus 360 --------------~gw~~~f~i~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 424 (534)
-.|+++|.+.+....++.+.....+ |+.++..+...+. ......+++++|
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~---------------~~~~~~~l~~~~ 236 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS---------------GSAGLSSLFQNK 236 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc---------------ccchHHHHHhCh
Confidence 1377788777766666555544433 2111111111000 001356689999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 425 PVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.++...++.|++.........|++.|+.+..|++..+++...+..+++.++||+++.++..|+...+.+.
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La 306 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA 306 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 9999999999999999999999999999988999999999999999999999999999999998887543
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.89 E-value=3e-21 Score=227.19 Aligned_cols=264 Identities=15% Similarity=0.162 Sum_probs=196.0
Q ss_pred hHHHHhHHHHHhhhCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc-cCChHHH
Q 009469 224 VNMSIAILPMSKEFNWNS--TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-RIGLPFL 300 (534)
Q Consensus 224 ~~~~~~~~~~~~~~g~s~--~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~-~~~~~~l 300 (534)
.......+.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.+++.+++.++. ..+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 334444555556666554 4478999999999999999999999999999999998877666655544321 1168899
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc--------c-CchHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--------F-GWPSVFYSFGS 371 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~--------~-gw~~~f~i~~~ 371 (534)
+++|++.|++.+...++..+++.|++|+++|++++|+...+..+|.++|+++++++.+. + +|.+.+.+.++
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876 2 34444444443
Q ss_pred HHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (534)
Q Consensus 372 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~ 451 (534)
..++..++..+..++.+........... ..........++.+++++.++...+..++..+.......++|.|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPAAAPEVFDKKK-------YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYA 259 (1146)
T ss_pred HHHHHHHHHHhcCcCCCCCCcccccccc-------cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3333333333333433322111100000 000001123466778888888888777777777777888999999
Q ss_pred HHhhCCChh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 452 NQVLKFNLT-ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 452 ~~~~g~s~~-~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.+.+|++.. ..+++.+...++.+++.++.+++.||+++++.+.
T Consensus 260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~ 303 (1146)
T PRK08633 260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVP 303 (1146)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchh
Confidence 998999998 9999999999999999999999999999887544
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.89 E-value=3.7e-21 Score=226.05 Aligned_cols=269 Identities=14% Similarity=0.151 Sum_probs=195.6
Q ss_pred HHHHHHHHhhhhHHHHhHH-HHHhhhCCCc-chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHH---HHHHHHHHHH
Q 009469 213 FSAFLLCNMDRVNMSIAIL-PMSKEFNWNS-TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGF---GVIWWSVATV 287 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~-~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~---g~~~~~i~~~ 287 (534)
++..+..++....+..... .+..+.+.+. ..+++..+++.++++++++++|+++||+|||+++.. +.++.++..+
T Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~ 100 (1140)
T PRK06814 21 FFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI 100 (1140)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 3334443444333333332 2333333332 457888999999999999999999999999997643 2222222222
Q ss_pred HHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH
Q 009469 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (534)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~ 367 (534)
+..... +++.++++|+++|++.+...++..+++.+++|+++|++++|+.+++..+|.++||++++++....+|++.|+
T Consensus 101 ~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~ 178 (1140)
T PRK06814 101 YGFHLN--SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVA 178 (1140)
T ss_pred HHHHHh--hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 222334 789999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 009469 368 SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWM 447 (534)
Q Consensus 368 i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~l 447 (534)
+.+++.++.+++. ...++.+...+........ .......++.+.+++.+|...+..++.++....+..++
T Consensus 179 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1140)
T PRK06814 179 LLMGIAVLGWLAS-LFIPKTGNAAPDLKIDRNI---------IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQL 248 (1140)
T ss_pred HHHHHHHHHHHHH-hhCCCCCCCCCCCeeccch---------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444433333 3333322211111000000 00011246778889999999988888888888888999
Q ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 448 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 448 p~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
|.|+++.+|.+....+++.+...++.+++.++.|++.++..+++..
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~ 294 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV 294 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee
Confidence 9999998999999999999999999999999999999887766543
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.88 E-value=2.5e-20 Score=193.87 Aligned_cols=272 Identities=13% Similarity=0.047 Sum_probs=192.8
Q ss_pred HHHHHHHHHhhhhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh
Q 009469 212 CFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP 290 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~ 290 (534)
+....++.......+.+.+|.+ .+++|.++.++|++.+++.++..++++++|+++||+|||+.++.+.+..+++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 86 (396)
T TIGR00882 7 FGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFF 86 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 3344555566666677777665 567899999999999999999999999999999999999999887766655443321
Q ss_pred ---hhc---cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 009469 291 ---VAA---RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPS 364 (534)
Q Consensus 291 ---~~~---~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~ 364 (534)
+.+ ...+..+++.+++.|++.+...+....+..+.. ++++..+|......++|.++||++++.+.+ .+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~ 163 (396)
T TIGR00882 87 IYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQI 163 (396)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchH
Confidence 111 001334566788888888877777777776653 344567788888889999999999998865 59999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 444 (534)
.|++.+++.++..++.+...++.+++ +.. .+ . .. .+.+..+..+.++++++|.++.+.+..++....+....
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~-~--~~--~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~ 235 (396)
T TIGR00882 164 VFWLGSGFALILMLLLMFAKPKAPSS-ATV--AN-A--LG--ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFD 235 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchh-hhh--hc-c--cc--cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99988887777665554433332211 100 00 0 00 00111122356778999998887777766666666666
Q ss_pred HHHHHHHHHhh---CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 445 TWMPTYYNQVL---KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 445 ~~lp~~~~~~~---g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.+.+.|+.+.+ +.+....+.+.+...+...++.+..+++.||+++|+.+.
T Consensus 236 ~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~ 288 (396)
T TIGR00882 236 QQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALL 288 (396)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 77888887754 445566788888888889999999999999999998543
No 79
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.88 E-value=3e-20 Score=189.82 Aligned_cols=300 Identities=13% Similarity=0.088 Sum_probs=215.2
Q ss_pred HhhhhHHHHhHHHHHhhhCCCcch-hHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChH
Q 009469 220 NMDRVNMSIAILPMSKEFNWNSTT-VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP 298 (534)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~s~~~-~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~ 298 (534)
--.....+.+.|++.+++|++..+ .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..+++++++ ++.
T Consensus 39 ~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~ 116 (511)
T TIGR00806 39 AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVW 116 (511)
T ss_pred HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 345677888899999999999999 99999999999999999999999999999999999999999999999998 799
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHH---HHHHHH
Q 009469 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF---GSLGSI 375 (534)
Q Consensus 299 ~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~---~~~~~i 375 (534)
.+.+.|++.|++.|... +...++..|+|+++|+++.|++.++..+|.+++++++++ +..+|||+-+.+. .....+
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999999999999999999999999999999999 5578999754432 222222
Q ss_pred HHHHHHHhhcCCCCCChhhhH--------HHHhhhhCCC---cc--ccc-------cccccHHHhhcchhHHHHHHHHHH
Q 009469 376 WFALWLKKAYSSPKEDPELRA--------EEKRHILGGS---IS--KEA-------VSVIPWKLILSKAPVWALIISHFC 435 (534)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~--~~~-------~~~~~~~~ll~~~~~~~~~l~~~~ 435 (534)
.+++.++ .|..++..-..+. .+........ .. .+. .-...++...+++.++...+...+
T Consensus 195 a~~~a~~-LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~ 273 (511)
T TIGR00806 195 SVFLALF-LKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVF 273 (511)
T ss_pred HHHHHHh-CCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHH
Confidence 3333333 3322221000000 0000000000 00 000 011234555778888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHh
Q 009469 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQ 515 (534)
Q Consensus 436 ~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~ 515 (534)
...+++.+.+|......+..+-...-.|..-++..+.+.+..+..|++-.++.+.. .+.+.+..++.+..++.
T Consensus 274 a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~-------~l~l~v~s~~~~gll~~ 346 (511)
T TIGR00806 274 NSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS-------KLLIAVVSAIQAGLVFW 346 (511)
T ss_pred HhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH-------HHHHHHHHHHHHHHhhh
Confidence 88888888888877776653322224566677777778888888888744432211 13555555555666666
Q ss_pred hccccchhHHHHhhhc
Q 009469 516 LSHVRTPAMAVLCMAC 531 (534)
Q Consensus 516 ~~~~~~~~~~~~~~~~ 531 (534)
.....+.++..+..++
T Consensus 347 m~~t~~Iw~~Y~~yvl 362 (511)
T TIGR00806 347 MSQSHDIWVLYVTYVL 362 (511)
T ss_pred hhcccchHHHHHHHHH
Confidence 7777777766555443
No 80
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.88 E-value=4.3e-20 Score=195.88 Aligned_cols=271 Identities=15% Similarity=0.187 Sum_probs=199.9
Q ss_pred HHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChH
Q 009469 219 CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP 298 (534)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~ 298 (534)
..+.....+..++.+..++|- .....|+.+.+.++..+..++.|+++|.+|||++++.+.++..+|.++++.++ |..
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--~~~ 132 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--NMN 132 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--cHH
Confidence 344455556677889999985 47788999999999999999999999999999999999999999999999999 889
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Q 009469 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 299 ~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i 378 (534)
.++++..+.|+|.|... .....++|..|.|.|+.+.++......+...++|.++..+..+.+|||.|++.+++..+.++
T Consensus 133 ~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 99999999999977665 45666899999999998888877766666668888888887778999999999888776665
Q ss_pred HHHHhhcCCCCCC--h-hhhHHH-Hhhh--h------------------CCCc--------------------------c
Q 009469 379 LWLKKAYSSPKED--P-ELRAEE-KRHI--L------------------GGSI--------------------------S 408 (534)
Q Consensus 379 ~~~~~~~~~~~~~--~-~~~~~~-~~~~--~------------------~~~~--------------------------~ 408 (534)
+.+++.++++++. . +....+ -.+. . .+.. +
T Consensus 212 l~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE 291 (599)
T PF06609_consen 212 LIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWE 291 (599)
T ss_pred HHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhh
Confidence 5444433222111 1 111111 1000 0 0110 0
Q ss_pred c--c-ccccccHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChh---hhHHHHHHHHHHHHHHHHHHH
Q 009469 409 K--E-AVSVIPWKLILSK-APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT---ESGLFCVLPWLTMAVFANMGG 481 (534)
Q Consensus 409 ~--~-~~~~~~~~~ll~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~---~~g~l~~~~~~~~iig~~i~g 481 (534)
. . +.+..|. .++++ |.+....+..++....++....+.|......++.+.. ..+++......+..++.++.|
T Consensus 292 ~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g 370 (599)
T PF06609_consen 292 WFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILG 370 (599)
T ss_pred hhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHH
Confidence 0 0 1122333 46776 5566666777777777788888889888887776653 567788888888899999999
Q ss_pred HHHHHhhcccchH
Q 009469 482 WIADTLVSKGLSI 494 (534)
Q Consensus 482 ~l~dr~g~r~~~i 494 (534)
.+..++++-|..+
T Consensus 371 ~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 371 LLFSKIRHIKWQL 383 (599)
T ss_pred HHHHHccchhHHH
Confidence 9999988777543
No 81
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=3e-22 Score=196.33 Aligned_cols=240 Identities=20% Similarity=0.163 Sum_probs=211.0
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccc
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~ 313 (534)
.++.+-+.+++|++++.+.+...+..++.|.+.||+|+|..+++|.+++....+++++.. ++++++++|.++|+|.++
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHH
Confidence 344567889999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhhHHHHHHhhhccCC-cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCCh
Q 009469 314 AMPAMNNMLSKWIPVS-ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP 392 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~-~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~ 392 (534)
..++..++++|.||++ +|++++|+...+.++|..+||+++|.+.+..|.+..|.+++++.++-..+.++..+....+.+
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 9999999999999876 479999999999999999999999999999999999999999999888887776654333221
Q ss_pred hhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHH
Q 009469 393 ELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLT 472 (534)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~ 472 (534)
... +..+++.++++|.++.........+.+.......++.++.+.+..+..+.|+.+....+.
T Consensus 256 ~~~-----------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~ 318 (464)
T KOG3764|consen 256 STE-----------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLS 318 (464)
T ss_pred ccc-----------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccc
Confidence 110 113567789999999988888888888888888899999998886666999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q 009469 473 MAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 473 ~iig~~i~g~l~dr~g~r~~ 492 (534)
..++..+.|.+.||++..++
T Consensus 319 y~ig~~lfg~la~k~~~~~w 338 (464)
T KOG3764|consen 319 YAIGTNLFGKLADKYPHLRW 338 (464)
T ss_pred hhccCchHHHHHHhcCchhH
Confidence 99999999999999995554
No 82
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.87 E-value=1.6e-19 Score=176.06 Aligned_cols=265 Identities=13% Similarity=0.190 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
|..+....+..+.---..+.+++.++.+.+++|+|.+..|++.++..+...+.+++..++..|+|.++.+.+++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44444444444444456677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-CchH
Q 009469 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPS 364 (534)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-gw~~ 364 (534)
.++-... +.+.++.+-.+.|.|.+......++++-+.| +++-+..+|+|.....+|..+++.+...+.++. |||.
T Consensus 91 ~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 9887765 3667888899999999999999999999999 667899999999999999999999999988887 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 009469 365 VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILL 444 (534)
Q Consensus 365 ~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~ 444 (534)
.+.+.+.++++.+++++....+......... ..+-..++++|..|.+.+.+.++.+.+|...
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~~~~~~~~------------------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~ 228 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQAASIATK------------------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVI 228 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccccccc------------------cccccccccCchhHHHHHHHHhhHHHHHHHH
Confidence 9999999999888887765322110000000 0112237899999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 445 TWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 445 ~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
.|+|.++.| .|+|+.++|.+.++..+..++..+....+.+|...++..
T Consensus 229 ~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~ 276 (395)
T COG2807 229 GWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPL 276 (395)
T ss_pred HHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchH
Confidence 999999999 599999999999999999999999999999987666643
No 83
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=8.2e-20 Score=194.22 Aligned_cols=300 Identities=18% Similarity=0.193 Sum_probs=225.3
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh
Q 009469 212 CFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~ 291 (534)
.+.+.+++.++..+.....+-+..+..-|+..++++..+..+...+.++++|.++||++||++++.+.++.++..++.++
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~ 94 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAV 94 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 44555666667777777777777777889999999999999999999999999999999999999998877665544433
Q ss_pred ---hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 009469 292 ---AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (534)
Q Consensus 292 ---~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i 368 (534)
....+.+.+++.-++.|++.+...|+..+++.+..|+++...++++.+...++..++||.++|.++..+|-.++|.+
T Consensus 95 l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~i 174 (524)
T PF05977_consen 95 LAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLI 174 (524)
T ss_pred HHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 23346788999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
.++..++...+.....++.+ +.+...+..... -...++.+.++|.+....+..++..+....+...+|
T Consensus 175 nalsfl~~i~~l~~~~~~~~-~~~~~~e~~~~~-----------l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlP 242 (524)
T PF05977_consen 175 NALSFLISILALLRWKPPPP-PSSLPRERFFSA-----------LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLP 242 (524)
T ss_pred HHHHHHHHHHHHHHcccccc-ccccchhhhhhh-----------HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhh
Confidence 87766655444333332221 111111110000 112456667777777666666666666566667789
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHh
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC 528 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 528 (534)
.+.++.+|.++...|++.+..++|+++|.++.+++.+|++++++. .++.++.++.++.++...+.+..++.
T Consensus 243 l~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv---------~~~~~~~a~~~~~lal~~~~~~~~~~ 313 (524)
T PF05977_consen 243 LFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV---------LLASLLFALALLLLALSPSFWLALIA 313 (524)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh---------HHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 999999999999999999999999999999999999998877632 23333444444455555555555544
Q ss_pred hhcc
Q 009469 529 MACS 532 (534)
Q Consensus 529 ~~~~ 532 (534)
+++.
T Consensus 314 l~l~ 317 (524)
T PF05977_consen 314 LFLA 317 (524)
T ss_pred HHHH
Confidence 4443
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=4.7e-20 Score=193.32 Aligned_cols=268 Identities=15% Similarity=0.057 Sum_probs=175.4
Q ss_pred HHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh---h
Q 009469 216 FLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP---V 291 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~---~ 291 (534)
.++.......+.+.++. +.+++|+++.++|++.+++.++..++++++|+++||+|||++++++..+.+++..... .
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 98 (420)
T PRK09528 19 FFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVF 98 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455555555 4566999999999999999999999999999999999999999887666554433221 1
Q ss_pred hcc---CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 009469 292 AAR---IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (534)
Q Consensus 292 ~~~---~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i 368 (534)
... ..+...++++++.|.+.....+....+..+ . .++++..+|.......+|..++|++++.+.+ .+|++.|++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~ 175 (420)
T PRK09528 99 APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWL 175 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHH
Confidence 110 001112233444444333333333333322 2 3567888899999999999999999999876 589999998
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
.+++.++..++.+...++++++.... +++. .+.+.......+..+++|.+|.+.+..++....+.....++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~ 247 (420)
T PRK09528 176 GSGSALILLVLLFFAKPDAPSTAKVA-NALG-------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFP 247 (420)
T ss_pred HHHHHHHHHHHHhcccccccchhhhc-cchh-------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHH
Confidence 88777666655554443332211100 0000 001111223455678888887776666555555555556677
Q ss_pred HHHHHhh---CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 449 TYYNQVL---KFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 449 ~~~~~~~---g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.|+.+.+ +.+..+.+.+.++..++.+++.++.|++.||+++|+...
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 296 (420)
T PRK09528 248 NFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALL 296 (420)
T ss_pred HHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhH
Confidence 7776643 456667888888888999999999999999999998543
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.86 E-value=3.2e-19 Score=189.52 Aligned_cols=279 Identities=12% Similarity=0.073 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHH-Hhh--hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHHHHHH
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPM-SKE--FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~~~i~ 285 (534)
..+++..++..+..+.+.+.++.+ .++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++++++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 334445556666666666666665 445 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCc---chhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE---RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~---rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
.+++++++ +++.+++.+++.|+|.|...+...+++++++|+++ |+.++++++.+.++|.++||++++++.+++||
T Consensus 93 ~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMSI--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred HHHHHhcc--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 99998877 67788889999999999999999999999998764 88899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC---CCCCChhhhHHHHhhh-------------------hCCCccc-----------
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYS---SPKEDPELRAEEKRHI-------------------LGGSISK----------- 409 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~---~~~~~~~~~~~~~~~~-------------------~~~~~~~----------- 409 (534)
++.|++.++..++..+.++...+. .+++......++.... .......
T Consensus 171 ~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 171 HVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 999998776554443333332221 1111110000000000 0000000
Q ss_pred -------cccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhh----hHHHHHHHHHHHHHHHH
Q 009469 410 -------EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE----SGLFCVLPWLTMAVFAN 478 (534)
Q Consensus 410 -------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~----~g~l~~~~~~~~iig~~ 478 (534)
...+.....+-.|...+..+.+..++.+..+....+.++.+..+..+.+... .+++.++..+..++..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p 330 (475)
T TIGR00924 251 IIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSP 330 (475)
T ss_pred HHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHH
Confidence 0000000011112223445555555666666677777888887754443222 66788888888888887
Q ss_pred HHHHHHHHhhcc
Q 009469 479 MGGWIADTLVSK 490 (534)
Q Consensus 479 i~g~l~dr~g~r 490 (534)
+..++..++.+|
T Consensus 331 ~~~~~~~~l~~~ 342 (475)
T TIGR00924 331 VLAMIWTRLGRK 342 (475)
T ss_pred HHHHHHHHHHhC
Confidence 766655566554
No 86
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=2.3e-19 Score=192.84 Aligned_cols=296 Identities=18% Similarity=0.173 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHhh--hhHHHHhHHHHHhhh-----CCCc--chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHH
Q 009469 210 LLCFSAFLLCNMD--RVNMSIAILPMSKEF-----NWNS--TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVI 280 (534)
Q Consensus 210 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----g~s~--~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~ 280 (534)
+...+..+..+.+ ....++....+.+.. ..+. .+.+|+.++..++..++++++|+++|++|||+.++++.+
T Consensus 48 ~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~ 127 (513)
T KOG0254|consen 48 LVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVV 127 (513)
T ss_pred HHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3333344444443 344455555555432 1122 345899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 009469 281 WWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK- 359 (534)
Q Consensus 281 ~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~- 359 (534)
++.++.++++++. ++++++++|++.|+|.|+...+.+.+++|..|++.||...+..+....+|..++..++....+.
T Consensus 128 ~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~ 205 (513)
T KOG0254|consen 128 LFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVY 205 (513)
T ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Confidence 9999999999999 8999999999999999999999999999999999999999999999999999995554444322
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChh-hhHHHHh---hhhCC-Ccccc-----------------ccccccH
Q 009469 360 FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPE-LRAEEKR---HILGG-SISKE-----------------AVSVIPW 417 (534)
Q Consensus 360 ~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~---~~~~~-~~~~~-----------------~~~~~~~ 417 (534)
.+||..+.+..+.+++..+. ..+.|+.|+.--+ .+..+.+ ....+ ..... ......+
T Consensus 206 ~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (513)
T KOG0254|consen 206 AGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASW 284 (513)
T ss_pred ccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccH
Confidence 48998888888887777777 6666655532111 0010000 00000 00000 0000113
Q ss_pred HHhhc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 418 KLILS----KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 418 ~~ll~----~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
+++++ ++.++...+..+.+..+.....+|.+.+++.. |.+... .....+..+..+++.+++.++.||+|||+++
T Consensus 285 ~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll 362 (513)
T KOG0254|consen 285 GELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL 362 (513)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 33332 22334455555555666677788888888874 665443 5555666777788888889999999999988
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009469 494 ITAVRKIMQSIGFLGPA 510 (534)
Q Consensus 494 i~~~~~~~~~~~~~~~~ 510 (534)
+.+...+..+..++...
T Consensus 363 l~s~~~m~~~~~~~~~~ 379 (513)
T KOG0254|consen 363 LFGAAGMSICLVILAVV 379 (513)
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 87664444444433333
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.85 E-value=6.4e-19 Score=187.49 Aligned_cols=166 Identities=17% Similarity=0.267 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHH-hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSI-AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWS 283 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~~~ 283 (534)
++.+..+++..+...+..+.+.. ...++.+++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.++++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 44555555555666666655554 4555678899999999999999998889999999999999 999999999999999
Q ss_pred HHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCC--cchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS--ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~--~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
++.++++++.+ ....++++|+++|+|.|...+...++++|++|++ +|+.++++++.+.++|..+||.+++++.+++|
T Consensus 93 ~g~~~~~~~~~-~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 93 IGYFMTGMSLL-KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHhcc-chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999998862 1334558899999999999999999999999877 45789999999999999999999999999999
Q ss_pred chHHHHHHHHH
Q 009469 362 WPSVFYSFGSL 372 (534)
Q Consensus 362 w~~~f~i~~~~ 372 (534)
||+.|++.++.
T Consensus 172 w~~~F~i~~i~ 182 (489)
T PRK10207 172 YSVTYNLCGAG 182 (489)
T ss_pred hHHHHHHHHHH
Confidence 99999986543
No 88
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.8e-18 Score=177.82 Aligned_cols=252 Identities=18% Similarity=0.216 Sum_probs=186.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc-CChHHHHHHHHHHhhcccchhhHHHHHH
Q 009469 244 VGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMNNML 322 (534)
Q Consensus 244 ~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~-~~~~~ll~~r~l~Gig~g~~~~~~~~~i 322 (534)
.+.+.+++.+|.++|+++.|+++||+|||..+.++.++..++.+++.++.. ..+.+++++|++.|+..|......+-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999888887776531 2678999999999999999999999999
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHHHHHHHHH-hh-cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCC-----Chhhh
Q 009469 323 SKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI-LI-QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKE-----DPELR 395 (534)
Q Consensus 323 ~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~-l~-~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~-----~~~~~ 395 (534)
.|..|++.||..-.+...+..+|.+++..++.- +. +.-.|++.+.+..+.+++.+++. .+.|++|+- .++.+
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHHHHcCCHHH
Confidence 999999999999999999999999999666532 33 34469988887777766655544 445555542 11111
Q ss_pred HHHHhhhh-C---------------CCccccccccccHHHhhcchhHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 396 AEEKRHIL-G---------------GSISKEAVSVIPWKLILSKAPVWA----L-IISHFCHNWGTFILLTWMPTYYNQV 454 (534)
Q Consensus 396 ~~~~~~~~-~---------------~~~~~~~~~~~~~~~ll~~~~~~~----~-~l~~~~~~~~~~~~~~~lp~~~~~~ 454 (534)
..+..+.. + ...+..+.+...++++++++.... . .+.......+......|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 10000000 0 001111124456778888754332 2 222333334556677777778877
Q ss_pred hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Q 009469 455 LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAV 497 (534)
Q Consensus 455 ~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~ 497 (534)
.|++..++.+.....++..++.++++.++.||+|||++++.+.
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~ 342 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISL 342 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 5999999999999999999999999999999999999887655
No 89
>PTZ00207 hypothetical protein; Provisional
Probab=99.83 E-value=5.7e-18 Score=180.92 Aligned_cols=284 Identities=16% Similarity=0.123 Sum_probs=207.2
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
.++|..+........+. ...+.++.+.+.+.+++|++..+++++.++. ....++.++.|++.||+|+|+++.++.+++
T Consensus 24 ~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 24 PRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45577666555544433 4455677888899999999999999998874 345567888999999999999999999999
Q ss_pred HHHHHHHhhhcc----CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHH-HHHHHHHhh
Q 009469 283 SVATVLTPVAAR----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVT-GLAVSPILI 357 (534)
Q Consensus 283 ~i~~~l~~~~~~----~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~i-gp~i~~~l~ 357 (534)
+++.++++++.+ .+++.+.+.|++.|+|.+...+.....+.+||| ++||+++|+...+.++|+++ +++..+++.
T Consensus 102 ~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998721 278999999999999999888999999999995 78999999999999999976 455555443
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCCh---h--hhHHHHh--h-----------------------------
Q 009469 358 QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP---E--LRAEEKR--H----------------------------- 401 (534)
Q Consensus 358 ~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~---~--~~~~~~~--~----------------------------- 401 (534)
.+|++.|++.+++.+++.++++.+.++++.... + .+++++. .
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~y 258 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVF 258 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHH
Confidence 468888888888888877777766655432110 0 0010000 0
Q ss_pred ------------------------hh------C--------------C-Cc-----------------cc-------c--
Q 009469 402 ------------------------IL------G--------------G-SI-----------------SK-------E-- 410 (534)
Q Consensus 402 ------------------------~~------~--------------~-~~-----------------~~-------~-- 410 (534)
.. . . .. +. +
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYI 338 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCC
Confidence 00 0 0 00 00 0
Q ss_pred -ccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhh--hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 411 -AVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE--SGLFCVLPWLTMAVFANMGGWIADTL 487 (534)
Q Consensus 411 -~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~--~g~l~~~~~~~~iig~~i~g~l~dr~ 487 (534)
+.....+.+.+++..+|++.+.++|.......+.+.+.++.+..-|.+... ...+.++..+++.+|++.+|.+...+
T Consensus 339 ~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~ 418 (591)
T PTZ00207 339 APQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS 418 (591)
T ss_pred CCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH
Confidence 000115667778889999999999998888888888888888742763333 33378899999999999999988444
Q ss_pred hccc
Q 009469 488 VSKG 491 (534)
Q Consensus 488 g~r~ 491 (534)
.+|+
T Consensus 419 ~~~~ 422 (591)
T PTZ00207 419 QKRR 422 (591)
T ss_pred Hhhc
Confidence 4433
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.83 E-value=1.3e-17 Score=173.10 Aligned_cols=269 Identities=12% Similarity=0.057 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHH--HHHHHHHHHHHHHHH-HHHHhhhCCchHHHHHHHHH-HH
Q 009469 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLI--QSSFFWGYLLTQIVG-GIWADKFGGKPVLGFGVIWW-SV 284 (534)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i--~s~~~l~~~~~~~~~-G~l~Dr~Grr~~l~~g~~~~-~i 284 (534)
++.++..++..+.......+.+|.+.++.|.+..++|++ .++..+...+.+|++ ++..||+|||+.+++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455666778888888899999999999999999999997 466677777788887 44789999998875555332 22
Q ss_pred HHHHHh-hhccCC-hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 285 ATVLTP-VAARIG-LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 285 ~~~l~~-~~~~~~-~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
.....+ +....+ ...++...++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 222222 211112 223344445556666777778888888888888888888888888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHH
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFI 442 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~ 442 (534)
|..|++.+++.++..+..+...++.+++++. ... ...++++++|+|.++...+..++...+...
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 226 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA-PLA---------------RRASLFRFFRRPLAWSLLALALLSAMTAVS 226 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-chh---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 9999999988776666554443332211110 000 012356788899888888888888887888
Q ss_pred HHHHHHHHHHHhhCCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcccchH
Q 009469 443 LLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 443 ~~~~lp~~~~~~~g~s~~~~g~l~~~~~~-~~iig~~i~g~l~dr~g~r~~~i 494 (534)
...+.+.|+++ .|+++.+.+.+.....+ ..+++.++.|++.||+|+++...
T Consensus 227 ~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~ 278 (390)
T TIGR02718 227 GFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFI 278 (390)
T ss_pred HHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 88899999988 69999999998887764 66777899999999999987654
No 91
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.83 E-value=4.9e-19 Score=186.37 Aligned_cols=260 Identities=16% Similarity=0.108 Sum_probs=191.8
Q ss_pred hhhHHHH-hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hCCc-hHHHHHHHHHHHHHHHHhhhccC
Q 009469 222 DRVNMSI-AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGK-PVLGFGVIWWSVATVLTPVAARI 295 (534)
Q Consensus 222 ~~~~~~~-~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~g~~~~~i~~~l~~~~~~~ 295 (534)
....+.. ..+.+.+++|+++.++|++.++..+..++..|+.|+++|| +||| +.++++.+..+++.+++.+.+..
T Consensus 14 ~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~ 93 (437)
T TIGR00792 14 IFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF 93 (437)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC
Confidence 3333443 4455678899999999999999999999999999999998 6774 46778888888888777766522
Q ss_pred C----hHHHHHHHHHHhhcccchhhHHHHHHhhhc-cCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCch
Q 009469 296 G----LPFLLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWP 363 (534)
Q Consensus 296 ~----~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-------~~gw~ 363 (534)
+ ...+++.+++.+++.+....+..++..+.. ++++|++..++...+..+|..+++.+.+.+.. ..+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 94 SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 1 345667778888888887788888888887 46899999999888888888877766655542 45899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
+.+++.+++.++..++.+...++++++.+..+ +.+......++.++++|.++.+.+..++...+....
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKERYSEIPKNI------------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCCCCCccc------------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887777666655555432111000 000011234667889999998888888877777766
Q ss_pred HHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 444 LTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+.+.|.+..++ +....+.+.....++.+++.++.++++||+|+|+...
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 242 NGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFA 291 (437)
T ss_pred cchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 6666667665555 4566677777788999999999999999999987644
No 92
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=1.3e-18 Score=169.95 Aligned_cols=253 Identities=15% Similarity=0.076 Sum_probs=168.2
Q ss_pred HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhccc
Q 009469 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 312 (534)
Q Consensus 233 ~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g 312 (534)
..+..+.+..-.|++.+.+.+...+.++.+|.++||+|||+++.+|.+..++..++.+++. |+..+++.|++.|+.-|
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kg 136 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKG 136 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccC
Confidence 3344445666789999999999999999999999999999999999999999999999998 88777788999999977
Q ss_pred chhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc---ccC-chHHH--HHHHHHHHHHHHHHHHhhcC
Q 009469 313 VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ---KFG-WPSVF--YSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~---~~g-w~~~f--~i~~~~~~i~~i~~~~~~~~ 386 (534)
. ..+..++++|++++|+|+.+++.+...+++|.++||++++++.. ..| +...+ ++..++.+.-...+.++.++
T Consensus 137 n-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 137 N-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred c-hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5 47889999999999999999999999999999999999999987 233 22222 11122222212222333444
Q ss_pred CCCCChhhhHHH-HhhhhCCCccccccccccHHHhhcchhHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 009469 387 SPKEDPELRAEE-KRHILGGSISKEAVSVIPWKLILSKAPVW-------ALIISHFCHNWGTFILLTWMPTYYNQVLKFN 458 (534)
Q Consensus 387 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-------~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s 458 (534)
+-+.+++.++.. ..+..+...+....+...-..++++++.. .+.+-.+.+...+..+.++.+.+....+|++
T Consensus 216 TL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~s 295 (451)
T KOG2615|consen 216 TLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYS 295 (451)
T ss_pred cccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCC
Confidence 322222110000 00000000111111111111234444322 2333334444444445555555556678999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 459 LTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (534)
Q Consensus 459 ~~~~g~l~~~~~~~~iig~~i~g~l~dr~g 488 (534)
+.+.|.+++..++.+.+.........+|.+
T Consensus 296 s~~~G~vl~~tGl~m~~~ql~~~~~l~~~~ 325 (451)
T KOG2615|consen 296 SMQQGKVLSTTGLLMLVIQLALVPILPRYK 325 (451)
T ss_pred hhhheeeeehhhHHHHHHHHhccccccccc
Confidence 999999998888888877777666666655
No 93
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.80 E-value=3.4e-17 Score=171.43 Aligned_cols=259 Identities=10% Similarity=0.018 Sum_probs=177.8
Q ss_pred HHHHHHHhhhhHHH-HhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHHHhh
Q 009469 214 SAFLLCNMDRVNMS-IAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 214 ~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~g~~~~~i~~~l~~~ 291 (534)
+..+..+.....+. +..+.+.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++..++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555554 44455677899999999999999999999999999999999965 77888888888888878777
Q ss_pred hccCChHHHHHHHHHHhhcccchhhHHHHHHhhh--------ccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW--------IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 292 ~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~--------~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
.+ +++.+++.|++.|++.+...+...++...+ .....|.+.+| .+|.++||++++.+....+|.
T Consensus 89 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~ 160 (418)
T TIGR00889 89 VT--TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI 160 (418)
T ss_pred hc--CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH
Confidence 76 788888999999998776666655543222 22223444444 378888888888874333354
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFIL 443 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 443 (534)
.|++.+++.++..++. ...++.++.+++.+....+ ......+.++|+|.++.+.+..++........
T Consensus 161 -~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 227 (418)
T TIGR00889 161 -QLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQIT 227 (418)
T ss_pred -HHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHH
Confidence 3555555555544433 3344433211111000000 00112455788999888888877776666666
Q ss_pred HHHHHHHHHHhhCCCh--------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 444 LTWMPTYYNQVLKFNL--------TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 444 ~~~lp~~~~~~~g~s~--------~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+++.|+++ .|.++ ...+.+.++..+..+++.++.|++.||+|+|++++
T Consensus 228 ~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~ 285 (418)
T TIGR00889 228 NIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVML 285 (418)
T ss_pred HHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 7788888877 46543 55688888889999999999999999999998544
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=1.3e-16 Score=154.97 Aligned_cols=183 Identities=19% Similarity=0.296 Sum_probs=156.2
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHH
Q 009469 202 FPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIW 281 (534)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~ 281 (534)
.+.+|...+..........+-....+.+.|...+..|.+..+..++......+..+++..+|.++|++|||+.+.+..+.
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 34567777777777777777666677778888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 282 WSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 282 ~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
.++..++.+.++ |+..+++.|.+.|+|.|+ .|...++-.|..|..+|+.-+-.. ..+.+|.++...+...++.++|
T Consensus 153 t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 153 TGVFGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred HHHHHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999 888899999999999998 788999999999999999887777 8999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 009469 362 WPSVFYSFGSLGSIWFALWLKKAYSSPK 389 (534)
Q Consensus 362 w~~~f~i~~~~~~i~~i~~~~~~~~~~~ 389 (534)
|||.+........+.+ .+.+..++.++
T Consensus 229 wr~~l~~~~~pl~~~a-~f~~w~~ESpR 255 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAA-RFLVWVYESPR 255 (528)
T ss_pred HHHHHHHHHhHHHHHH-HHHhhcccCcc
Confidence 9998887775544443 34444555443
No 95
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=1.9e-17 Score=178.59 Aligned_cols=251 Identities=18% Similarity=0.155 Sum_probs=177.0
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccc
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~ 313 (534)
.+.+..+.....+..+++.+|..+|++++|+++||+|||++++++.++.+++.++.++++ |++.+++.|++.|++.++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccc
Confidence 355667888899999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCCh-
Q 009469 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDP- 392 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~- 392 (534)
.......++.|++++++|+.+..+ ......++.+++++++++.. +|||.+++..+..++.+++ +++.++.++...
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 88888899999999999887 8999999998888877666 444444443111
Q ss_pred -----hhhHHHHhh-hhC-CCcc----------------ccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 393 -----ELRAEEKRH-ILG-GSIS----------------KEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (534)
Q Consensus 393 -----~~~~~~~~~-~~~-~~~~----------------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~ 449 (534)
+..+..++. ... .... ....+...+.++++.+++....+...+..+......+-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 000000000 000 0000 00011133566666665444444444433333222222233
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 450 ~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.... +|.+.. +...+.......+....+...|++|||....
T Consensus 344 ~~~~-lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~ 384 (521)
T KOG0255|consen 344 NVSG-LGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLF 384 (521)
T ss_pred hhhh-cCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHH
Confidence 3322 444433 2333344466666677789999998886433
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.77 E-value=3.2e-16 Score=167.62 Aligned_cols=166 Identities=20% Similarity=0.240 Sum_probs=134.1
Q ss_pred HHHHHHHHHHhhhhHHHHhHH-HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHHHHHHHHH
Q 009469 211 LCFSAFLLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~~~i~~~l 288 (534)
.+++..++..+..+.+...++ ++.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 334444455555555555444 4568899999999998888877777777899999999 59999999999999999988
Q ss_pred HhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCc--chhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH
Q 009469 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSE--RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF 366 (534)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~--rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f 366 (534)
++++.+ +.+.+++.+++.|+|.|...+...+++.+++|+++ |..++++++.+.++|.++||.+++++.+++||++.|
T Consensus 105 ~~~~~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 105 VAWSGH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred HHHhcc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 888642 35667788999999999988999999999997654 456889999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 009469 367 YSFGSLGSIWF 377 (534)
Q Consensus 367 ~i~~~~~~i~~ 377 (534)
++.++..++..
T Consensus 184 ~i~~i~~~i~~ 194 (500)
T PRK09584 184 ALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHH
Confidence 98775444433
No 97
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=2.8e-16 Score=157.46 Aligned_cols=285 Identities=16% Similarity=0.150 Sum_probs=223.8
Q ss_pred CcccCCchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHH
Q 009469 198 WWEQFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (534)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 277 (534)
..+..++||.+++...+..+.+.+.+..+++...+....+| +...+-|...+|++.+....+++-|+.|++|-|..+.+
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 34577899999999999999998888888888888888899 77788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccC----ChH--HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHH
Q 009469 278 GVIWWSVATVLTPVAARI----GLP--FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLA 351 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~~~----~~~--~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~ 351 (534)
+..+.+++..+-..+... .++ ....+..+.+.+.-..+.....+..-||++++|..|..+-..+..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999887665421 233 56678888888877777777788889999999999999999999999999999
Q ss_pred HHHHhhccc------CchH--HHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcc
Q 009469 352 VSPILIQKF------GWPS--VFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSK 423 (534)
Q Consensus 352 i~~~l~~~~------gw~~--~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 423 (534)
+...+..+- .|-. .|+..+++.++.+++..+..+++|+.++........ +..-....+..+++
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n 265 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKN 265 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcC
Confidence 988887654 2432 344455555555555555555544444333222211 01123457778999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 424 APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
+.+.++.+.+.+....++...+.+...+.. .|++...+|.......++++++.++.|.++||.++.+..
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~ 334 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT 334 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 999999999888888888877777655554 477778999999999999999999999999999877643
No 98
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.74 E-value=3.2e-15 Score=157.39 Aligned_cols=171 Identities=14% Similarity=0.226 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-CCchHHHHHHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIWWSVA 285 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~ 285 (534)
.+..++...+...+..+.+...+|.+ .+++|++..+.+++.+.+.....++++++|+++||+ |||++++++.++.+++
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg 89 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH
Confidence 34444445555555666566566654 667899999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCC--cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 286 TVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS--ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 286 ~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~--~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
.++++.... +...+++...+.++|.|...+...++++|.+|++ +|..++++.+.+.++|+.++|.+.+++.+.+||+
T Consensus 90 ~lll~~~~~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 90 HVVLGASEI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHhhc-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 877765431 2222444444555666777777889999999875 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009469 364 SVFYSFGSLGSIWFAL 379 (534)
Q Consensus 364 ~~f~i~~~~~~i~~i~ 379 (534)
+.|.+.++..++..+.
T Consensus 169 ~~F~iaaigm~l~li~ 184 (493)
T PRK15462 169 MGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998866544443333
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.73 E-value=4.7e-16 Score=164.31 Aligned_cols=250 Identities=14% Similarity=0.077 Sum_probs=173.2
Q ss_pred hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hCCc-hHHHHHHHHHHHHHHHHhhhccCC----hHH
Q 009469 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGK-PVLGFGVIWWSVATVLTPVAARIG----LPF 299 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~g~~~~~i~~~l~~~~~~~~----~~~ 299 (534)
...++.+.+|+++.++|++.++..+...+..|+.|+++|| +||| +.++++.+..+++.+++...+..+ ...
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4555788899999999999999999999999999999999 7774 556677777777776555554211 334
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhc-cCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------ccCchHHHHHHHH
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-------KFGWPSVFYSFGS 371 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-------~~gw~~~f~i~~~ 371 (534)
+++..++.+++......+..++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..+|+..+.+.++
T Consensus 112 ~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~i 191 (444)
T PRK09669 112 ACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGL 191 (444)
T ss_pred HHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 555556667766777778889999998 45789998888888888888777765544432 2467878887777
Q ss_pred HHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 372 LGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYY 451 (534)
Q Consensus 372 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~ 451 (534)
+.++..++.+...+++..++++. +......++.+++++.++.+.+..++...+........++|.
T Consensus 192 i~~v~~~~~~~~~~e~~~~~~~~---------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~ 256 (444)
T PRK09669 192 LGVVLFFCCFFMTKERYTPEVDN---------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYV 256 (444)
T ss_pred HHHHHHHHHhCCeEEecCCCCcC---------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheee
Confidence 77666655555444432211100 001123467788999998888877776666655555555555
Q ss_pred HHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 452 NQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 452 ~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+...+ ++...+.+.....+..+++.++.+++.||+|+|+...
T Consensus 257 ~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~ 298 (444)
T PRK09669 257 NYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFK 298 (444)
T ss_pred eeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 44333 3334445555666778888889999999999987544
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.72 E-value=2.2e-15 Score=157.93 Aligned_cols=280 Identities=14% Similarity=0.088 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhCCchHHHHH-HH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD----KFGGKPVLGFG-VI 280 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~~g-~~ 280 (534)
|.++.++. ..+...+.+....+..+++.+++|.+....+++..+..+...+.+|++|+++| |+|||+.++++ .+
T Consensus 4 ~~li~~~~-~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLRVAS-VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 44444443 33444556666777777788999999999999999999999999999999999 59999988764 66
Q ss_pred HHHHHHHHHhhhccCC-------------h--HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcc--hhHHHHHHHHHH
Q 009469 281 WWSVATVLTPVAARIG-------------L--PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER--SRSLAFVYSGMY 343 (534)
Q Consensus 281 ~~~i~~~l~~~~~~~~-------------~--~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r--g~~~gi~~~~~~ 343 (534)
..+++.++++++.+.. + +.++++-.+..++.....++..++++|.+|+++| +.+.++.+.+.+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 6666667777665210 0 2233333445567778888999999999998865 689999999999
Q ss_pred HHHHHHHHHHHHh--hccc-------------CchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCcc
Q 009469 344 LGSVTGLAVSPIL--IQKF-------------GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSIS 408 (534)
Q Consensus 344 lG~~igp~i~~~l--~~~~-------------gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (534)
+|.++|+.+++++ ...+ +.++.|++.+++.++..++.++..+|.+...++...+++. +. .
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~---~~--~ 237 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEA---AP--P 237 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhc---cc--c
Confidence 9999999999875 2211 4688899888888877777777777765422211100000 00 0
Q ss_pred ccccccccHHHhhc-----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChh------h----hHHHHHHHHHH
Q 009469 409 KEAVSVIPWKLILS-----KAPVWALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLT------E----SGLFCVLPWLT 472 (534)
Q Consensus 409 ~~~~~~~~~~~ll~-----~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~-~~g~s~~------~----~g~l~~~~~~~ 472 (534)
.+......++++++ .+.++.+++..++.+++.+.+..|.+.|+.+ .++-++. + ..+...+..+.
T Consensus 238 ~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~ 317 (477)
T TIGR01301 238 SKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVV 317 (477)
T ss_pred cccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 00000112233322 4678999999999999999999999888764 5554321 1 12334444555
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 009469 473 MAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 473 ~iig~~i~g~l~dr~g~r~ 491 (534)
..+..++..++.+++|+|+
T Consensus 318 ~~i~s~~l~~l~~~~g~~k 336 (477)
T TIGR01301 318 LGITSIGMEKLCRGWGAGK 336 (477)
T ss_pred HHHHHHHHHHHHHHhccch
Confidence 5677777888899998543
No 101
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.71 E-value=4.1e-16 Score=163.92 Aligned_cols=253 Identities=17% Similarity=0.238 Sum_probs=196.8
Q ss_pred HhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhCCch-HHHHHHHHHHHHHHHHhhh-c-cCC----
Q 009469 228 IAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD----KFGGKP-VLGFGVIWWSVATVLTPVA-A-RIG---- 296 (534)
Q Consensus 228 ~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D----r~Grr~-~l~~g~~~~~i~~~l~~~~-~-~~~---- 296 (534)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||+ .+++|.+..+++.+++... + ..+
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3455577888999999999999999999999999999999 799765 4567888888888877765 3 111
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-------CchHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-------GWPSVFYS 368 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-------gw~~~f~i 368 (534)
...+++..++..++......+..++..|+.+ +++|.+..++-..+..+|.++...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2234666677788989999999999999997 578999999988888888876766666665432 58888888
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 369 FGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 369 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
.+++.++..++..+..++.+++.++.. ++..-...++.++++|+++.+.+..++...+........+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~-------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQE-------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccccccc-------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 888888887777777666211111110 0111123467789999999999999998888888888889
Q ss_pred HHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+|.+...|.+ ...+.+.....++.+++.++.++++||+|+|+...
T Consensus 250 y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~ 294 (428)
T PF13347_consen 250 YYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI 294 (428)
T ss_pred HHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehh
Confidence 9999888866 56677778888999999999999999999998655
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.71 E-value=3.7e-17 Score=153.25 Aligned_cols=283 Identities=17% Similarity=0.197 Sum_probs=206.7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIW 281 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~ 281 (534)
.+|...++..++..|.+++.+-..+.....+..+.+++.++..++.++|.+...+.+.++|++.|| +|-|...++-+++
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 445666666677777777777777888888899999999999999999999999999999999997 6888877777777
Q ss_pred HHHHHHHHhhhc-cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 282 WSVATVLTPVAA-RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF 360 (534)
Q Consensus 282 ~~i~~~l~~~~~-~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~ 360 (534)
..++.++++.-. ...+|+++++|++.|+|.-....+.+.+..-||..||.+.++|+..+...+|..+--.+.+++.+..
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 778887776532 1158999999999999988888889999999999999999999999999999998888888887653
Q ss_pred Cc------hHHH---HHHHHHHHHH-HHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHH
Q 009469 361 GW------PSVF---YSFGSLGSIW-FALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALI 430 (534)
Q Consensus 361 gw------~~~f---~i~~~~~~i~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 430 (534)
+- .... ..++...+.. ++.....-...++.+.....++ ...+ + ..+..+.+. + .|++|.+.
T Consensus 200 ~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~--g~~G-e----~pkLtdv~~-f-~ppfw~~~ 270 (459)
T KOG4686|consen 200 GRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEE--GFLG-E----EPKLTDVNT-F-YPPFWVLV 270 (459)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhc--Cccc-C----Ccccccccc-c-CccHHHHH
Confidence 31 1111 1111111111 1111111111111110000000 0000 0 000111111 1 47899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 431 ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 431 l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+..+++..+.+.+.+.-|.++++.+|+|+..++.+.+...+...+..++.|.++||+|++-+.+
T Consensus 271 iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv 334 (459)
T KOG4686|consen 271 IICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWV 334 (459)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhH
Confidence 9999999999999999999999999999999999999999999999999999999999886543
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.70 E-value=1.8e-15 Score=161.14 Aligned_cols=267 Identities=12% Similarity=0.046 Sum_probs=180.3
Q ss_pred HHHHhhhhHHHHh-HHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHh----hhCC-chHHHHHHHHHHHHHHHHh
Q 009469 217 LLCNMDRVNMSIA-ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD----KFGG-KPVLGFGVIWWSVATVLTP 290 (534)
Q Consensus 217 ~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D----r~Gr-r~~l~~g~~~~~i~~~l~~ 290 (534)
+...+....+..+ ..++.+.+|+++..+|.+..+..+..++..|+.|.++| |+|| |+.++++.+..+++.+++.
T Consensus 16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf 95 (473)
T PRK10429 16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF 95 (473)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH
Confidence 3344444445544 44467778999999999999999999999999999999 5698 5667778888777766664
Q ss_pred hhccC--C--hHHHHHHHHHHhhcccchhhHHHHHHhhhc-cCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc------
Q 009469 291 VAARI--G--LPFLLIMRAFMGIGEGVAMPAMNNMLSKWI-PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK------ 359 (534)
Q Consensus 291 ~~~~~--~--~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~-~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~------ 359 (534)
..+.. + +..+++..++.+++......+..+++.|+. ++++|.+..++-..+..+|+.+.+.+...+...
T Consensus 96 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~ 175 (473)
T PRK10429 96 SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDR 175 (473)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 43311 1 223445556667888888888999999998 588999999987777777766665554433221
Q ss_pred -cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHH
Q 009469 360 -FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNW 438 (534)
Q Consensus 360 -~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 438 (534)
.+|++...+.+++.++..++.+...++++.+......+ +.+......++.+++||.++.+.+..++...
T Consensus 176 ~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~ 245 (473)
T PRK10429 176 GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE----------GSHLTLKDIVALIYKNDQLSCLLGMALAYNI 245 (473)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccc----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 24666666666666655555554444432211100000 0001112235556789999888888888777
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
.......+.++|.+...+ +....+.+.....++.+++.++.+++.||+|+|+...
T Consensus 246 ~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~ 300 (473)
T PRK10429 246 ASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWA 300 (473)
T ss_pred HHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 777776776766655433 5556666677777888999999999999999998654
No 104
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=1.1e-16 Score=160.00 Aligned_cols=304 Identities=15% Similarity=0.185 Sum_probs=199.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhh-C-------CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF-N-------WNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPV 274 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-------~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~ 274 (534)
++....+.++.+++|...++...++...+-+...+ | +++...+.+..+..+|.++|++++|++.|++|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 34466778888888999999999988888765544 2 456677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCC-----hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHH
Q 009469 275 LGFGVIWWSVATVLTPVAARIG-----LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG 349 (534)
Q Consensus 275 l~~g~~~~~i~~~l~~~~~~~~-----~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~ig 349 (534)
+...+++++++.+++++....+ ...+...|+++|+|.|+-+|...++.+|...++.||...+.+.+..++|...|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999877664211 45788999999999999999999999999999999999999888888888877
Q ss_pred HHHHHHhhcc----c-----------CchHHHHHHHHHHHHHHHHHHHhhcCCCCCC-----h-hhhHHHHhhhhCC---
Q 009469 350 LAVSPILIQK----F-----------GWPSVFYSFGSLGSIWFALWLKKAYSSPKED-----P-ELRAEEKRHILGG--- 405 (534)
Q Consensus 350 p~i~~~l~~~----~-----------gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~--- 405 (534)
.+++-.+..- + =||..+.+.++..++++..- ...+++++-. + +....+..+....
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~R-l~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~ 275 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFR-LKMPETARYTALVSKKLKQAAGDMKKVLSVDIE 275 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhh-hcCCcchhHHHHhhcCHhhhhhccccccccccc
Confidence 7766555421 1 18877766555554433322 2233332211 0 0000000000000
Q ss_pred ----Cccccccc---cccHHHhhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHH--------HHH
Q 009469 406 ----SISKEAVS---VIPWKLILSK---APVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL--------FCV 467 (534)
Q Consensus 406 ----~~~~~~~~---~~~~~~ll~~---~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~--------l~~ 467 (534)
.......+ ...+...+.. +.++..+...|+.-.+++....+...+++. .|+.+..... ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 276 AESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred hhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHH
Confidence 00000000 0112222222 345666677788888888888888888876 4765544333 111
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 468 -LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS 517 (534)
Q Consensus 468 -~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~~ 517 (534)
+...+.+.|..+...++|++||+.. ...+++++.++.+.++
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk~i---------q~~GF~~~~i~~~~~~ 396 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRKYI---------QLMGFFIMTIFFFVIA 396 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhHHH---------HHhhHHHHHHHHHHHc
Confidence 1222233355566778999999964 4445555554444443
No 105
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.66 E-value=9.2e-14 Score=143.75 Aligned_cols=261 Identities=13% Similarity=0.167 Sum_probs=185.9
Q ss_pred HHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC-CchHHHHHHHHHHHHHHHHhhhc
Q 009469 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-GKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G-rr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
.+++.+.....+.+.++.+.++.|.+..++|.+.++..+..++.++++|.++||.+ +|+++.+..++.++..+.....+
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~ 89 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44555556666778888889999999999999999999999999999999999986 56777777777777666666666
Q ss_pred cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHH-HHHhhcccC---chHHHHHH
Q 009469 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV-SPILIQKFG---WPSVFYSF 369 (534)
Q Consensus 294 ~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i-~~~l~~~~g---w~~~f~i~ 369 (534)
+++.+++..++..+......+...++..+... +++.-.|-.....++|-+++... ++.+....+ ..+.+++.
T Consensus 90 --~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 165 (400)
T PF03825_consen 90 --SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIA 165 (400)
T ss_pred --cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 67777777888888878788888888888774 45556666666677777666443 233333322 23455555
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (534)
Q Consensus 370 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~ 449 (534)
++..++.....+. .|+.++++......+ +....+...++|+|+++.+.+..++.........++.+.
T Consensus 166 ~~~~~ll~~~~l~-lp~~~~~~~~~~~~~------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~ 232 (400)
T PF03825_consen 166 AILSLLLAGFALF-LPKTPPKRSAKESVK------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSI 232 (400)
T ss_pred HHHHHHHHHHHHh-CCCCccccccCCCcc------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544443333333 333332111110000 001112345899999999999999999899999999999
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 450 ~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
|+++..|.+....+.+.++..+..++.-...+++..|+|.+++
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l 275 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL 275 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 9999544788888888888888899999999999999998864
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.65 E-value=2.3e-14 Score=151.56 Aligned_cols=265 Identities=12% Similarity=0.041 Sum_probs=164.2
Q ss_pred HHHHHHhhhhHHHH-hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh----CCchH-HHHHHHHHHHHHHH
Q 009469 215 AFLLCNMDRVNMSI-AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF----GGKPV-LGFGVIWWSVATVL 288 (534)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~----Grr~~-l~~g~~~~~i~~~l 288 (534)
..+..........+ ..+++.+.+|+++.++|++.++..+..++..+++|+++||. |||+. +.++.+...+..++
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 33333334333333 34456777899999999999999999999999999999996 66664 45565555444433
Q ss_pred H-hhh----ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHH-----HHHHHHHHHHHHHHhh
Q 009469 289 T-PVA----ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSG-----MYLGSVTGLAVSPILI 357 (534)
Q Consensus 289 ~-~~~----~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~-----~~lG~~igp~i~~~l~ 357 (534)
. ... .......+++..++.+++.+...++..++..+..+ +++|.+..++-..+ ..++..++|.+.+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g 175 (448)
T PRK09848 96 VFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP 175 (448)
T ss_pred HHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 221 10112223444566777788787777777777664 46788776665443 2345555666655432
Q ss_pred ccc--CchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHH
Q 009469 358 QKF--GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFC 435 (534)
Q Consensus 358 ~~~--gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~ 435 (534)
... +|.....+.+++.++..++.....+++.+++.+. ......++.++++|.++...+..++
T Consensus 176 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----------------~~~~~~~~~l~~n~~f~~~~~~~~~ 239 (448)
T PRK09848 176 EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----------------PSLKISLQTLKRNRPLFMLCIGALC 239 (448)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----------------CCHHHHHHHHhCCchHHHHHHHHHH
Confidence 111 1211112222222222222222223321111000 0111246778999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 436 HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 436 ~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
...+......+.|.|+++.+|.+....++......++.+++.++.+++.||+++|+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 240 VLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred HHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 888888888888888888888777666665555567788899999999999999876543
No 107
>PRK11462 putative transporter; Provisional
Probab=99.65 E-value=1.1e-13 Score=146.67 Aligned_cols=259 Identities=10% Similarity=0.030 Sum_probs=179.8
Q ss_pred HHHhhhhHHHHh-HHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hCCc-hHHHHHHHHHHHHHHHHhh
Q 009469 218 LCNMDRVNMSIA-ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGK-PVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~g~~~~~i~~~l~~~ 291 (534)
........++.+ ..++.+.+|+++..+|.+..+.-+.-++.-|+.|.++|| +||| +.++++.+..+++.+++..
T Consensus 20 ~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~ 99 (460)
T PRK11462 20 ASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS 99 (460)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh
Confidence 333444444443 444678889999999999999999999999999999996 6876 4556777777877776655
Q ss_pred hccCC----hHHHHHHHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc------
Q 009469 292 AARIG----LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------ 360 (534)
Q Consensus 292 ~~~~~----~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~------ 360 (534)
.+..+ ...+++.-++..++..+...+..++.+++.+ ++||.+..++...+..+|..+++.+...+....
T Consensus 100 ~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~ 179 (460)
T PRK11462 100 TPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKP 179 (460)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 54211 2335556666788888888888899999987 789999999999999999888877766555433
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHH
Q 009469 361 -GWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWG 439 (534)
Q Consensus 361 -gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~ 439 (534)
+|+....+.+++.+++..+.+...+++++++++.. .....++.+++++.++.+....++....
T Consensus 180 ~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~----------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~ 243 (460)
T PRK11462 180 LGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTT----------------SMREDLRDIWQNDQWRIVGLLTIFNILA 243 (460)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccCC----------------CHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 47777777777666665555554444332211000 0112356678888888777666666666
Q ss_pred HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 440 TFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 440 ~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
.........+|.+..+|. ....+.+.....++++++.+++++++||+++|+..
T Consensus 244 ~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~ 296 (460)
T PRK11462 244 VCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF 296 (460)
T ss_pred HHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 555555555555554453 33445566777788899999999999999988753
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.64 E-value=1.1e-13 Score=140.99 Aligned_cols=292 Identities=13% Similarity=0.081 Sum_probs=177.9
Q ss_pred HHHHHHhhhhHHHHhHHHHHh-hhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH--HHHHH-HHh
Q 009469 215 AFLLCNMDRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW--SVATV-LTP 290 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~--~i~~~-l~~ 290 (534)
..+...+......++.+.+.+ +.|++.+++|.+.++..+...+.+|+.|.++||+|.||-++....+. ..+.+ ...
T Consensus 15 ~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v 94 (412)
T PF01306_consen 15 FYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYV 94 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 334444556666677777655 58999999999999999999999999999999999776544333222 22222 212
Q ss_pred hhc--cCCh-HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH
Q 009469 291 VAA--RIGL-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFY 367 (534)
Q Consensus 291 ~~~--~~~~-~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~ 367 (534)
+.+ ..|. ...+++.+..|+......++.-+++.++. ++.+.-.|-..+..++|.+++..++|.+.+ .+-...||
T Consensus 95 ~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fw 171 (412)
T PF01306_consen 95 FGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFW 171 (412)
T ss_dssp HHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHH
Confidence 221 1133 22233334445555555566666666654 445666777788899999999999999986 44567788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 009469 368 SFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWM 447 (534)
Q Consensus 368 i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~l 447 (534)
+.....++..++.+...++.+++.+..+... .++++.+.+...+++|+|++|.+.+........+..+....
T Consensus 172 i~s~~~~il~lll~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf 243 (412)
T PF01306_consen 172 IASAAAIILLLLLLLLKPDVPPQAEVADALG--------AKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQF 243 (412)
T ss_dssp HHHHHHHHHHHHHHSS---SSSSS-SSTTSS--------S------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcCchhhhhhcccc--------cCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665555555544444433322211110000 00111122345678999999999998888777778777778
Q ss_pred HHHHHHhhC---CChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhH
Q 009469 448 PTYYNQVLK---FNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAM 524 (534)
Q Consensus 448 p~~~~~~~g---~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 524 (534)
+.|+...+. .+....|++.+..-+..++...+..++.+|+|.|+.++ ++.+++++=....+..++++.
T Consensus 244 ~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Ll---------lag~i~~iRi~~~~~~~~~~~ 314 (412)
T PF01306_consen 244 PIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLL---------LAGVIMAIRIIGSGFATNPWV 314 (412)
T ss_dssp HHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---------HHHHHHHHHHHHHHT--SHHH
T ss_pred HHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHH---------HHHHHHHHHHHHHhhhcchHH
Confidence 888876432 23456788888888888999999999999999998443 333334444444444455544
Q ss_pred HH
Q 009469 525 AV 526 (534)
Q Consensus 525 ~~ 526 (534)
+.
T Consensus 315 i~ 316 (412)
T PF01306_consen 315 IS 316 (412)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 109
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.63 E-value=3.1e-14 Score=152.43 Aligned_cols=285 Identities=17% Similarity=0.203 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 286 (534)
..+.+..+..+...+....+...+..+.+.|+++..+.|++.+.+-++..+...+..+..-|.-|-+.+-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34455555566666666778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhc-----------c-------C--------------------------------ChHHHHHHHHHHhhcccchhh
Q 009469 287 VLTPVAA-----------R-------I--------------------------------GLPFLLIMRAFMGIGEGVAMP 316 (534)
Q Consensus 287 ~l~~~~~-----------~-------~--------------------------------~~~~ll~~r~l~Gig~g~~~~ 316 (534)
+++++-+ . . -+..++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 8876541 0 0 022567788999999999999
Q ss_pred HHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc------------------C-chHHHHHHHHHHHHHH
Q 009469 317 AMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------------------G-WPSVFYSFGSLGSIWF 377 (534)
Q Consensus 317 ~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~------------------g-w~~~f~i~~~~~~i~~ 377 (534)
...+|+-|...+++-...+|++.....+|+++|-++++++...+ | |..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987521 1 4445667777777777
Q ss_pred HHHHHhhcCCCCCChhhhHHHHhhhhCCCc---ccc------ccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 378 ALWLKKAYSSPKEDPELRAEEKRHILGGSI---SKE------AVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMP 448 (534)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp 448 (534)
+.+++++++.++..++....+.+....... ... ..-....+.+++||.+...+++..+....+.++.+|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 777777666655433211111111101000 000 01123467788999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhccc
Q 009469 449 TYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 449 ~~~~~~~g~s~~~~g~l~~~~~~-~~iig~~i~g~l~dr~g~r~ 491 (534)
-|++.++|.++..+..+.....+ +..+|.+++|++.+|+.-+.
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 99999999999999988866655 55677778999999886543
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.63 E-value=3e-14 Score=142.95 Aligned_cols=186 Identities=11% Similarity=0.051 Sum_probs=146.2
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc----------------
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK---------------- 359 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~---------------- 359 (534)
+++.+++.-++.|.|.+...+..+.++++..+++++++.+++.+.++++|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 6889999999999999999999999999999999999999999999999999999999988732
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHH
Q 009469 360 FGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWG 439 (534)
Q Consensus 360 ~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~ 439 (534)
..|+++|++.+.+.++..+++.+......++ ++. ++... ++. ...+.++++|.++...+..+++...
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-~~~-~~~~~--------~~~---~~~~~~~~~~~~~l~~~~~f~yvg~ 155 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQE-ADV-ARVSS--------GDT---TQKTSAFQFTHLVLGALGIFVYVGA 155 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-ccc-ccccc--------ccc---cchhhHHhhHHHHHHHHHHHHHHHH
Confidence 3689999977777665555444332111111 110 00000 000 1122356788888888888888888
Q ss_pred HHHHHHHHHHHHHHh--hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 440 TFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 440 ~~~~~~~lp~~~~~~--~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..+...|++.|+.+. +|+++.+++...+...++.++|+++++++.||+++++.+.
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~ 212 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA 212 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 999999999999864 6899999999999999999999999999999999887543
No 111
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.62 E-value=1.4e-14 Score=153.60 Aligned_cols=279 Identities=11% Similarity=0.024 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC-----CchHHHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-----GKPVLGFGVIWW 282 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~g~~~~ 282 (534)
.+.++...++..+..........+.+.+++|++.++++...++..+...+-.+ +|+++||++ ||+.++++.++.
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 44455556677777633344455556778999999999999999999988666 999999997 777788887776
Q ss_pred H-HHHHHHhhhccCCh-HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhH---HHHHHHHHHHHHHHHHHHHHHhh
Q 009469 283 S-VATVLTPVAARIGL-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRS---LAFVYSGMYLGSVTGLAVSPILI 357 (534)
Q Consensus 283 ~-i~~~l~~~~~~~~~-~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~---~gi~~~~~~lG~~igp~i~~~l~ 357 (534)
. ++...++..+ +. ....+..++.+++.+....+.-++..|..+ +++... .++......+|.++|+.++|.+.
T Consensus 106 ~~~~~~~l~~~~--~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 106 SAILYGLLPGKV--SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHhccccc--chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 3 4333333333 33 344457889999999999999999999997 555443 33444455689999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhcCCCC-CChhhhHHHH---hhhhCCCccccccccccHHHhhcchhHHHHHHHH
Q 009469 358 QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK-EDPELRAEEK---RHILGGSISKEAVSVIPWKLILSKAPVWALIISH 433 (534)
Q Consensus 358 ~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~ 433 (534)
+.++|+..|++.+++.++..+..++ .++++. ..+...+.+. ..................+..+++|.++...+..
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~-~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fi 261 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNL-SKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFI 261 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHh-cccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Confidence 9999999999988887776443333 343320 1110000000 0000000000000112344457778887766655
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 434 FC-HNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 434 ~~-~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
++ ..........+ -.+..+.+|+++...|++.....++.+++..+.+++.+|++.|+.
T Consensus 262 fl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~ 320 (468)
T TIGR00788 262 FLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL 320 (468)
T ss_pred HHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH
Confidence 55 22221111111 113334589999999999999999999999999999889988764
No 112
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.61 E-value=5.9e-19 Score=186.64 Aligned_cols=277 Identities=18% Similarity=0.202 Sum_probs=184.3
Q ss_pred HHHHHHhhhhHHHHhHHHHH--hhhCCCc---------chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH
Q 009469 215 AFLLCNMDRVNMSIAILPMS--KEFNWNS---------TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS 283 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~--~~~g~s~---------~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~ 283 (534)
+.+..+++...++...+... ..+..+. .+.+++.+...++..+|++++|+++||+|||+.+.++.++..
T Consensus 8 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~ 87 (451)
T PF00083_consen 8 GGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMI 87 (451)
T ss_pred HHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 34566666666655554433 2222222 246889999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccC-ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-
Q 009469 284 VATVLTPVAARI-GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG- 361 (534)
Q Consensus 284 i~~~l~~~~~~~-~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g- 361 (534)
++.++.++++.. +++.++++|++.|++.|+..+....++.|..|+++|++..++.+.+..+|.+++..++..+....+
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 167 (451)
T PF00083_consen 88 IGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDN 167 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999988733 678899999999999999999999999999999999999999999999999998888766644344
Q ss_pred --chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhh-HHHHhh--------------hhCCCc--cccccccccHHHhhc
Q 009469 362 --WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELR-AEEKRH--------------ILGGSI--SKEAVSVIPWKLILS 422 (534)
Q Consensus 362 --w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~--~~~~~~~~~~~~ll~ 422 (534)
||+.+++.+++.++..+.. .+.||.|+--.... .++.++ ..+... ++.......++++++
T Consensus 168 ~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 246 (451)
T PF00083_consen 168 WGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFR 246 (451)
T ss_pred ccccccccccccccccccccc-cccccccceecccccccccccccccccccccccccccccccccccccccceeeeeccc
Confidence 9999888777776554444 44555543211000 000000 000000 000001133555665
Q ss_pred chh----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 423 KAP----VWALIISHFCH-NWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 423 ~~~----~~~~~l~~~~~-~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
++. +........+. ..+......|.+.++++ .+.+.. -.......+...++.+++.++.||+|||++++.
T Consensus 247 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~ 321 (451)
T PF00083_consen 247 NKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLII 321 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccccccc
Confidence 532 22222222222 23334455566666655 566655 223334456666777777899999999986654
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.59 E-value=2.4e-13 Score=139.98 Aligned_cols=271 Identities=16% Similarity=0.123 Sum_probs=206.6
Q ss_pred HHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hCCc-hHHHHHHHHHHHHH
Q 009469 213 FSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGK-PVLGFGVIWWSVAT 286 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~g~~~~~i~~ 286 (534)
.+.-+............+.. +.+.+|+++..+|.++.+.-+.-++.-|+.|.++|| +||+ +.++++.+..++..
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~ 97 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVA 97 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHH
Confidence 33344444444444444444 678889999999999999999999999999999996 6764 56778888888888
Q ss_pred HHHhhhcc----CChHHHHHHHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhc---
Q 009469 287 VLTPVAAR----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQ--- 358 (534)
Q Consensus 287 ~l~~~~~~----~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~--- 358 (534)
+++..+++ ......++.-++.+++......+..++.+++.+ ++||.+..++-..+..+|..+...+.+.+..
T Consensus 98 ~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g 177 (467)
T COG2211 98 VLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG 177 (467)
T ss_pred HHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88887763 234556677788899999988899999999885 6889999999998888887766666555543
Q ss_pred ----ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHH
Q 009469 359 ----KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHF 434 (534)
Q Consensus 359 ----~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~ 434 (534)
..||+...++.+++..+..+++++..+|+..+....++..+ ......+..+++|+++...++..+
T Consensus 178 ~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~-----------~~~~~~~~~~~~Nrp~~~~l~~~l 246 (467)
T COG2211 178 GGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK-----------LKLKDSFLLIFKNRPLLLLLLMNL 246 (467)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc-----------ccHHHHHHHHHccchHHHHHHHHH
Confidence 34788888888888888888888877776653322111000 001123446789999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 435 CHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 435 ~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+...+.........+|.+..+|.+.............+.+++.++..++.+|+|+|++..
T Consensus 247 ~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 247 LLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred HHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 888888888888888888888888888888888888888888999999999999998655
No 114
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.58 E-value=2.3e-16 Score=168.56 Aligned_cols=284 Identities=15% Similarity=0.227 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
+.++++++...+ ..+....+...+..+++.|+++.++.|++.+.+-++..+..++..++.+|..|-+.+-+|.++.+++
T Consensus 3 ~fl~~~~~~~~~-q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g 81 (539)
T PF03137_consen 3 WFLVFLCLLGLF-QMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLG 81 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ehHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHH
Confidence 344444444333 3666667778888999999999999999999999999999999999999988888888999999998
Q ss_pred HHHHhhhc----c--------------------------------------------CChHHHHHHHHHHhhcccchhhH
Q 009469 286 TVLTPVAA----R--------------------------------------------IGLPFLLIMRAFMGIGEGVAMPA 317 (534)
Q Consensus 286 ~~l~~~~~----~--------------------------------------------~~~~~ll~~r~l~Gig~g~~~~~ 317 (534)
.+++++-+ . .-+..++++.++.|+|.+..++.
T Consensus 82 ~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tL 161 (539)
T PF03137_consen 82 SLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTL 161 (539)
T ss_dssp ----------------------------------------------------------------------SSS-------
T ss_pred HHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccc
Confidence 88765321 0 01356788999999999999999
Q ss_pred HHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc---------------------C-chHHHHHHHHHHHH
Q 009469 318 MNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF---------------------G-WPSVFYSFGSLGSI 375 (534)
Q Consensus 318 ~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~---------------------g-w~~~f~i~~~~~~i 375 (534)
..+|+-|..++++-+..+|++++...+|+++|-++++.+...+ | |..-|++.+++.++
T Consensus 162 G~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l 241 (539)
T PF03137_consen 162 GITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFL 241 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876421 1 44445566666666
Q ss_pred HHHHHHHhhcCCCCCChhhhHH---H-Hh--h-hhCCCcc--------ccccccccHHHhhcchhHHHHHHHHHHHHHHH
Q 009469 376 WFALWLKKAYSSPKEDPELRAE---E-KR--H-ILGGSIS--------KEAVSVIPWKLILSKAPVWALIISHFCHNWGT 440 (534)
Q Consensus 376 ~~i~~~~~~~~~~~~~~~~~~~---~-~~--~-~~~~~~~--------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~ 440 (534)
..+.++.++++.|...+..+.. + +. . ....... .-+.-....+.+++||.+....++..+.....
T Consensus 242 ~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~ 321 (539)
T PF03137_consen 242 SAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIV 321 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 6666666666554441110000 0 00 0 0000000 01112345677889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHhhcc
Q 009469 441 FILLTWMPTYYNQVLKFNLTESGLFCVLPWL-TMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 441 ~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~-~~iig~~i~g~l~dr~g~r 490 (534)
.++.+++|-|++.+++.++..+.++.....+ ++++|.+++|++.+|++-+
T Consensus 322 ~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 322 SGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ---------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 9999999999999999999999888766655 6778888999999998644
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.57 E-value=7.4e-12 Score=132.16 Aligned_cols=244 Identities=16% Similarity=0.079 Sum_probs=183.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHH-HHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHH
Q 009469 243 TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNM 321 (534)
Q Consensus 243 ~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~ 321 (534)
..++..++..+..++..|+.|.++|+-|+||.++ +..++..++.+++.+....+++...+.-++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999999998776654 444555556666666543346555566666667777888899999
Q ss_pred HhhhccCCcc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHhhccc--------CchHHHH
Q 009469 322 LSKWIPVSER--------------------------SRSLAFVYSGMYLGSVTGLAVSPILIQKF--------GWPSVFY 367 (534)
Q Consensus 322 i~~~~~~~~r--------------------------g~~~gi~~~~~~lG~~igp~i~~~l~~~~--------gw~~~f~ 367 (534)
+.+..+++++ ++..+.-.+..++|+++.-++.-.+.... +.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 89999988888899888877766654322 2477788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChh--hhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 009469 368 SFGSLGSIWFALWLKKAYSSPKEDPE--LRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT 445 (534)
Q Consensus 368 i~~~~~~i~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~ 445 (534)
+.++..++..+..++..|+++++.+. ....-.... ..-...++++.+.|....+.++.+++.-+...+..
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~--------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF--------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH--------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777777777777776552111 111100000 00113456677788999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cchH
Q 009469 446 WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK--GLSI 494 (534)
Q Consensus 446 ~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r--~~~i 494 (534)
....|.++.+|++..+...+..+..+.+++|.++.|++.||+|.| +.++
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~ 353 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLL 353 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 999999999999999999999999999999999999999999998 5443
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.54 E-value=6.3e-14 Score=122.18 Aligned_cols=136 Identities=26% Similarity=0.458 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhcc
Q 009469 248 QSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP 327 (534)
Q Consensus 248 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~ 327 (534)
.+.+.++..++.++.|++.||+|||+.+..+.++..++.++..+.. +++.+++.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3456778889999999999999999999999999998888888777 78888999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhc
Q 009469 328 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 328 ~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
+++|++++++......+|..++|.+.+.+.+..+|++.+++.+++.++..+..+...+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999888777766666555443
No 117
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.53 E-value=6.4e-12 Score=124.24 Aligned_cols=248 Identities=14% Similarity=0.145 Sum_probs=169.5
Q ss_pred hhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHH
Q 009469 222 DRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLL 301 (534)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll 301 (534)
.....++..-.+-+++|++..+++.++........+..++.|.++||+|||+.-++.+++++++++... .+ +++.++
T Consensus 49 aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~--~~~~L~ 125 (354)
T PF05631_consen 49 ADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SS--NYPVLL 125 (354)
T ss_pred HHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-cc--ccHHHH
Confidence 334455555555578999999999999999999999999999999999999999999999998886443 34 799999
Q ss_pred HHHHHHhhcccchhhHHHHHH-hhhc----cCCcchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCc--hHHHHHHHHHH
Q 009469 302 IMRAFMGIGEGVAMPAMNNML-SKWI----PVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGSLG 373 (534)
Q Consensus 302 ~~r~l~Gig~g~~~~~~~~~i-~~~~----~~~~rg~~~gi~~-~~~~lG~~igp~i~~~l~~~~gw--~~~f~i~~~~~ 373 (534)
++|++.|++.+..+.+--++. .|.- |++..+.-++... ...++-.+++.+++.++.+..+. .++|.....+.
T Consensus 126 ~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 126 LGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 999999999999988887754 3432 2222233333332 23344455566666666665544 67787766666
Q ss_pred HHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 374 SIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ 453 (534)
Q Consensus 374 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~ 453 (534)
++..++.....++...+..+..+..+. -...++.+++||+++.+.+...+.....+.+....++.++.
T Consensus 206 ~~~~~~I~~~W~ENyg~~~~~~~~~~~------------~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~ 273 (354)
T PF05631_consen 206 AVAAVLILKTWPENYGDTSSSSSLSGS------------FREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDP 273 (354)
T ss_pred HHHHHHHHhcccccCCCcccccchHHH------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecC
Confidence 666655554444433221111110000 01235667889999999999999988887776644333332
Q ss_pred hhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 454 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADT 486 (534)
Q Consensus 454 ~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr 486 (534)
+-...-.|++++.+.+..++|+.+..++..+
T Consensus 274 --~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 274 --DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred --CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1123457899999999999999988765543
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.53 E-value=2.3e-13 Score=142.54 Aligned_cols=162 Identities=17% Similarity=0.238 Sum_probs=133.6
Q ss_pred HHhHHHHHhhhCCCc--------chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc--CC
Q 009469 227 SIAILPMSKEFNWNS--------TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR--IG 296 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~--------~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~--~~ 296 (534)
....+.+.++.|.++ ...+.+.++..++..++.++.|+++||+|+|+++.++.++.+++..+...... .+
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344455556666443 56799999999999999999999999999999999999999888766665321 12
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHH-HHHHHHHHHHHHHHHHhhcc------cCchHHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQK------FGWPSVFYSF 369 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~-~~~~lG~~igp~i~~~l~~~------~gw~~~f~i~ 369 (534)
++.+++..++.|++.+...+....++.+++|+++|++++|+.+ ....+|.++||+++|.+.++ +||+++|++.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 4566778999999998888888999999999999999999997 57889999999999999987 4699999998
Q ss_pred HHHHHHHHHHHHHhhcCCC
Q 009469 370 GSLGSIWFALWLKKAYSSP 388 (534)
Q Consensus 370 ~~~~~i~~i~~~~~~~~~~ 388 (534)
+++.++..++.+++.+++.
T Consensus 388 ~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHHhCCcc
Confidence 8888887777777776553
No 119
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.52 E-value=2.4e-13 Score=139.25 Aligned_cols=150 Identities=12% Similarity=0.080 Sum_probs=127.7
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l 306 (534)
....+.+.++++.+..+.+++.+++.++..++.++.|++.||+|||+.+.++.++..++.++..+.+..+...+++..++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 34455566788999889999999999999999999999999999999999999888888877776653223334556777
Q ss_pred HhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Q 009469 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~ 376 (534)
.|++.+...+....++.|.+|+++|++++|+......+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888887777888899999999999999999999999999999999999999999999998877766554
No 120
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.52 E-value=3.2e-12 Score=130.68 Aligned_cols=178 Identities=21% Similarity=0.317 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHH-hHHHHHhhhC----CCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-CCchHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSI-AILPMSKEFN----WNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVI 280 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g----~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~g~~ 280 (534)
+.+..++..-+..-+.++.+.. .+.++..+++ ++.++..-+.+.|.....+.++++|+++||+ |+|+++++|.+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 3444555566666555554443 4445566666 9999999999999988899999999999995 99999999999
Q ss_pred HHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCC--cchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 281 WWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS--ERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 281 ~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~--~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
++++|.++.+.+...+...++++-++.++|.|..-+...++++|.+|++ +|-.++++++++.++|+.++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999998874124667888888899999999999999999999864 47788999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhh
Q 009469 359 KFGWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 359 ~~gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
.+||...|-+.++-..+.++..+...
T Consensus 181 ~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 181 NYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999988877776666655544
No 121
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.51 E-value=1.7e-12 Score=135.08 Aligned_cols=159 Identities=19% Similarity=0.202 Sum_probs=131.0
Q ss_pred HHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHH
Q 009469 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 226 ~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~ 305 (534)
.....+.+..+.|. ...++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.+ +.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHH
Confidence 33444554455565 3456777888889999999999999999999999998888888887777776 6777788889
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhc
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
+.|++.+..++.....+.+.+|+++|++++|+++....+|..+++.+.+.+.+..||++.|++.+++.++..++.+...+
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998888888888899999999999999999999999999999999999999999999888877776666555544
Q ss_pred CCC
Q 009469 386 SSP 388 (534)
Q Consensus 386 ~~~ 388 (534)
+++
T Consensus 391 ~~~ 393 (399)
T PRK05122 391 RAP 393 (399)
T ss_pred ccc
Confidence 433
No 122
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.50 E-value=3.2e-12 Score=132.04 Aligned_cols=255 Identities=17% Similarity=0.208 Sum_probs=173.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhh--hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKE--FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLGFGVIW 281 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~g~~~ 281 (534)
+|+.+.++.+..++.....+++.+..-++.++ .+.+.+..||+.++..++..++++.+|++..|.+. |+.+++|.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 48888888888888888877777665556666 67788889999999999999999999999999996 8889999999
Q ss_pred HHHHHHHH-hhh--ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 282 WSVATVLT-PVA--ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 282 ~~i~~~l~-~~~--~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
.+++.++. ++. ++...+.++++|++.|+|.|. ....-+++++....++|.++++....+..+|.++||.+...+..
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 99999988 333 222467899999999999775 47788999998889999999999999888888888888776653
Q ss_pred c--cC-----------chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchh
Q 009469 359 K--FG-----------WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAP 425 (534)
Q Consensus 359 ~--~g-----------w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 425 (534)
- -| +..+-|+.+++.++.+++.....+|..+...+...+...+ .....+.......+ ...
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d------~~~ 263 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE-EKSDIEKVKKPKLD------WVA 263 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh-hccchhhhccCChh------HHH
Confidence 1 11 2345566676766666666666565443332221111000 00000000000111 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHH
Q 009469 426 VWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCV 467 (534)
Q Consensus 426 ~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~ 467 (534)
.+...+..+...+......+..+.+....++++..++.....
T Consensus 264 ~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~g 305 (488)
T KOG2325|consen 264 VLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNG 305 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhh
Confidence 334444445555555555666666777778887666544333
No 123
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.49 E-value=3.2e-12 Score=136.86 Aligned_cols=172 Identities=14% Similarity=0.132 Sum_probs=124.3
Q ss_pred HHHHhhhhHHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH-Hhhhcc
Q 009469 217 LLCNMDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAAR 294 (534)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l-~~~~~~ 294 (534)
++.....+.+....|.+. +++|.+..+.++......++..++.++.|+++||+|||+++.++.++..++.+. ......
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 339 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS 339 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 333344445555666654 667998888888888889999999999999999999999988887654433322 222222
Q ss_pred CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-CchHHHHHHHHHH
Q 009469 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLG 373 (534)
Q Consensus 295 ~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-gw~~~f~i~~~~~ 373 (534)
.+...+++++++.|++.+........++.+++|++.|++++|+.+....+++.++|.+.+++.+.. +|+..+++..+..
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 419 (490)
T PRK10642 340 NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVA 419 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 256677888888888777777778888999999999999999866666677889999999988765 4676666655555
Q ss_pred HHHHHHHHHhhcCCCC
Q 009469 374 SIWFALWLKKAYSSPK 389 (534)
Q Consensus 374 ~i~~i~~~~~~~~~~~ 389 (534)
++.++..++ .+++++
T Consensus 420 ~i~~~~~~~-~pes~~ 434 (490)
T PRK10642 420 VIGLITGVT-MKETAN 434 (490)
T ss_pred HHHHHHHHH-hccccC
Confidence 554444443 355443
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=3.6e-12 Score=132.47 Aligned_cols=154 Identities=12% Similarity=0.107 Sum_probs=123.5
Q ss_pred HHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 226 MSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 226 ~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
+....|. +.+++|++..+.+++.+...+...++.+++|+++||+|+|+.+..+.+...+........+ +.+.+++.+
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 312 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 3344554 4677899999999988888888888999999999999999988877666655554444455 566777888
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHH
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~ 382 (534)
++.+++.+...+....+..|.+| ++|++++++++....+|..++|.++|.+.+.+||++.|++.+++.++.+++.+.
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 88888777777777788899996 469999999999999999999999999999999999998877766665555443
No 125
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.48 E-value=1.8e-11 Score=122.86 Aligned_cols=247 Identities=13% Similarity=0.108 Sum_probs=176.8
Q ss_pred HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC-----CchHH-HHHHHHHHHHHHHHhhhc----c-------C
Q 009469 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-----GKPVL-GFGVIWWSVATVLTPVAA----R-------I 295 (534)
Q Consensus 233 ~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l-~~g~~~~~i~~~l~~~~~----~-------~ 295 (534)
+..|++++...++.+.++..+... ..+.+|..+|+.+ ||..+ ..|.++.+.+..+.+++. . .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 456889999999999998888765 6889999999998 77554 455666655555544331 1 1
Q ss_pred Ch-H--HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH---H
Q 009469 296 GL-P--FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS---F 369 (534)
Q Consensus 296 ~~-~--~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i---~ 369 (534)
.+ + ...+...+.|+|.+...++..++++|..|+++|+++.++...+.-+|.+++..+.+.+.+.+.-.-...+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 11 2 2345566779999999999999999999999999999999999999999999999999887764333222 2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 370 GSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPT 449 (534)
Q Consensus 370 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~ 449 (534)
+++.++..++..+..+++.+..... ..+++......++++..+|....+.+..++...+++.-...+-+
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~-----------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAA-----------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccC-----------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 2222222222222222211111100 00111112235677788999988888888888888888888888
Q ss_pred HHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHH-Hhhccc
Q 009469 450 YYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIAD-TLVSKG 491 (534)
Q Consensus 450 ~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~d-r~g~r~ 491 (534)
|--+.+|++..+...+......+.+++..+.|++.. |.++++
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~ 276 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR 276 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH
Confidence 999999999999999999999999999999998876 445544
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=1.1e-12 Score=137.42 Aligned_cols=148 Identities=11% Similarity=0.088 Sum_probs=128.7
Q ss_pred hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhh
Q 009469 237 FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMP 316 (534)
Q Consensus 237 ~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~ 316 (534)
.+.+..++|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.++++ +.+.+++.+++.|++.+...+
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHH
Confidence 366777889999999999999999999999999999999999999998888888877 677888889999998888778
Q ss_pred HHHHHHhhhccCCcchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcC
Q 009469 317 AMNNMLSKWIPVSERSRSLAF-VYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 317 ~~~~~i~~~~~~~~rg~~~gi-~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~ 386 (534)
....++.+.+|++.|++..+. ++....+|.+++|.+.|++.+.+||+..|++.+++.++..++.+...++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888999999999999888765 6677889999999999999999999999999888877766666655554
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.47 E-value=2.8e-12 Score=141.52 Aligned_cols=135 Identities=13% Similarity=0.093 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhh
Q 009469 246 LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 325 (534)
Q Consensus 246 ~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 325 (534)
+...+..++.+++.++.|+++||+|||++++++.++.+++.+++++.+ +...+++.+++.|++.++.+++..++++|+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566788899999999999999999999999999999999888887 666778888888888888889999999999
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 326 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 326 ~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
+|+++|++++|+.+++..+|.++||++++.+... +...+|++.+++.++.+++.+++
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999988764 34566776666666555544443
No 128
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=4.2e-12 Score=131.77 Aligned_cols=155 Identities=19% Similarity=0.229 Sum_probs=129.9
Q ss_pred HHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 225 NMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 225 ~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
......+.+.++.+.+ ..++....+.++..++.++.|++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 309 (392)
T PRK12382 234 VIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAGA 309 (392)
T ss_pred HHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 3444455555556654 356667778888889999999999999999999999988888888777766 677778888
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
++.|++.+...+...+.+.+.+|+++||+++|+++....+|..++|.+.+.+.++.||++.|++.+++.++..++.+..
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999998888888888999999999999999999999999999999999999999999999999888777766665544
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=2.2e-12 Score=134.42 Aligned_cols=159 Identities=18% Similarity=0.194 Sum_probs=129.7
Q ss_pred HHHHhHHHHHhhhCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 225 NMSIAILPMSKEFNWNST----TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 225 ~~~~~~~~~~~~~g~s~~----~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
...+..+.+..+.+.+.. ..+++.++..++..++.+++|++.||+|||+.+.++.++..++.+...+.+ +.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 314 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHH
Confidence 344455555444433333 245666677788889999999999999999999999888887777776666 67778
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~ 380 (534)
++.+++.|++.+...+...+.+.+..|+++||+.++++.....+|..+||.++|.+.+..||++.|++.+++.++..++.
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999988877776666
Q ss_pred HHhhc
Q 009469 381 LKKAY 385 (534)
Q Consensus 381 ~~~~~ 385 (534)
+...+
T Consensus 395 ~~~~~ 399 (408)
T PRK09874 395 WNSLR 399 (408)
T ss_pred HHHHH
Confidence 55443
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.45 E-value=4.1e-12 Score=128.62 Aligned_cols=162 Identities=23% Similarity=0.385 Sum_probs=143.0
Q ss_pred HHHhhhhHHHHhHHHHHhhh-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCch-HHHHHHHHHHHHHHHHhhhccC
Q 009469 218 LCNMDRVNMSIAILPMSKEF-NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP-VLGFGVIWWSVATVLTPVAARI 295 (534)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~g~~~~~i~~~l~~~~~~~ 295 (534)
.............+.+.++. |.+..+.+++.+...++..++.++.|++.||+|+|+ .+.++.++..++.++....+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 263 (352)
T cd06174 186 LLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP-- 263 (352)
T ss_pred HHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--
Confidence 33444455555666665554 899999999999999999999999999999999999 99999999999999888877
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i 375 (534)
+.+.+++..++.|++.+...+...+++.|..|+++|++.+|+......+|..++|.+.+.+.+..+|++.+++.+++.++
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i 343 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL 343 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence 67888899999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHH
Q 009469 376 WFALWL 381 (534)
Q Consensus 376 ~~i~~~ 381 (534)
..++..
T Consensus 344 ~~i~~~ 349 (352)
T cd06174 344 AALLLL 349 (352)
T ss_pred HHHHhe
Confidence 666543
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.45 E-value=4.2e-12 Score=132.32 Aligned_cols=156 Identities=13% Similarity=0.025 Sum_probs=127.0
Q ss_pred HHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 225 NMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 225 ~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
......|.+.++.|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.+...++.++..+.+ +.+.+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHH
Confidence 344456777778899999999999999999999999999999999999998887777777666666665 566677777
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHHHHHHHHHHHHHHHHHH
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i~~~~~~i~~i~~~~ 382 (534)
++.|++.+...+...+++.+.+|+++|++++|+.+....+|..+||.++|.+.++.+ |...+++.+...++..++.+.
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 888888877888889999999999999999999999999999999999999988754 555565555454444444443
No 132
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.45 E-value=5.7e-12 Score=134.04 Aligned_cols=169 Identities=12% Similarity=0.037 Sum_probs=123.5
Q ss_pred HHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 215 AFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
..++............|. +.+++|++..+.++..+...++..++.+++|+++||+|+|+.++....+..++..+..+..
T Consensus 266 ~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~ 345 (467)
T PRK09556 266 ANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH 345 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh
Confidence 333333344445555665 5577999999999999999999999999999999999999887665544444332222222
Q ss_pred cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHH-HHHHHHHHHHHhhc------------cc
Q 009469 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQ------------KF 360 (534)
Q Consensus 294 ~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~l-G~~igp~i~~~l~~------------~~ 360 (534)
..+...+.+..++.|++.............|.+|+++||++.|+.+....+ |..++|.+.|++.+ ..
T Consensus 346 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~ 425 (467)
T PRK09556 346 ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT 425 (467)
T ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc
Confidence 225555667778888654444444456777999999999999999988886 77999999999999 57
Q ss_pred CchHHHHHHHHHHHHHHHHHHHh
Q 009469 361 GWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 361 gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
||+..|++.++..++..++.+..
T Consensus 426 ~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 426 GWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Confidence 89999988877766655554443
No 133
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.43 E-value=2e-12 Score=133.24 Aligned_cols=160 Identities=12% Similarity=0.168 Sum_probs=121.3
Q ss_pred HHHHHHhhhhHHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH--HHHhh
Q 009469 215 AFLLCNMDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT--VLTPV 291 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~--~l~~~ 291 (534)
..+.............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++..+.. ++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555666654 7789999999999999999999999999999999999998775554443332 22222
Q ss_pred hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhcccC-chHHHHHH
Q 009469 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFG-WPSVFYSF 369 (534)
Q Consensus 292 ~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~-~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i~ 369 (534)
....+.+.+++..++.|++.+...+...+++.|.+|+++|++++++. ..+..+|..++|.+++.+.++.| |++.++..
T Consensus 307 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 307 LDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 22225666677778888888888899999999999999999999984 45667899999999999999988 88777665
Q ss_pred HHHHH
Q 009469 370 GSLGS 374 (534)
Q Consensus 370 ~~~~~ 374 (534)
++..+
T Consensus 387 ~~~~l 391 (394)
T TIGR00883 387 AALAL 391 (394)
T ss_pred HHHHH
Confidence 54443
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=1.3e-11 Score=128.05 Aligned_cols=152 Identities=14% Similarity=0.067 Sum_probs=122.2
Q ss_pred HHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH-HhhhccCChHHHHHHHHHHh
Q 009469 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL-TPVAARIGLPFLLIMRAFMG 308 (534)
Q Consensus 230 ~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l-~~~~~~~~~~~ll~~r~l~G 308 (534)
.+.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+++. +..+..++.+. ....+ +.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAAN--SEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhc--hHHHHHHHHHHHH
Confidence 34456668999999999999999999999999999999999886544 44444444333 33444 5677778888999
Q ss_pred hcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhc
Q 009469 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 309 ig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
++.+...+.....+.+..| ++|++++|++.....+|..+||+++|.+.+++|++..|++.+++.++..++.....+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9887777777788888875 689999999999999999999999999999999999999988888776666655544
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.42 E-value=1.3e-11 Score=126.90 Aligned_cols=147 Identities=12% Similarity=0.103 Sum_probs=122.7
Q ss_pred HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcc
Q 009469 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE 311 (534)
Q Consensus 232 ~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~ 311 (534)
.+.+++|.++.+.+++.+...+...++.++.|++.||+|+|+++.++.++..+..+...+.+ +.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 34677899999999988888777888899999999999999998888777666655555555 5677778888999988
Q ss_pred cchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 312 GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 312 g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
+...+....++.|..|+ ++++++++++....+|..++|.+++.+.+..||+..|++.+++.++..++..
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 88888888899999865 6779999999999999999999999999999999999988877766655543
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.41 E-value=3.6e-12 Score=133.54 Aligned_cols=159 Identities=14% Similarity=0.032 Sum_probs=134.5
Q ss_pred HHHhHHHHHhh-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 226 MSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 226 ~~~~~~~~~~~-~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
+....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.+ +++.++++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHH
Confidence 34455666555 899999999999999999999999999999998888888888888888877777766 677777888
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhh
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
++.|++.+...+...+++.+.+|++.||+++|++.....+|..+||.+.|.+.+.+|++..+++.++..++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 88899888777778899999999999999999999999999999999999999999999888888877766666655554
Q ss_pred cC
Q 009469 385 YS 386 (534)
Q Consensus 385 ~~ 386 (534)
++
T Consensus 400 ~~ 401 (417)
T PRK10489 400 GE 401 (417)
T ss_pred cc
Confidence 43
No 137
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.41 E-value=9.5e-11 Score=117.49 Aligned_cols=244 Identities=17% Similarity=0.060 Sum_probs=184.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhCCch-HHHHHHHHHHHHHHHHhhhcc-CChHHHHHHHHHHhhcccchhhHHH
Q 009469 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP-VLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGEGVAMPAMN 319 (534)
Q Consensus 242 ~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~g~~~~~i~~~l~~~~~~-~~~~~ll~~r~l~Gig~g~~~~~~~ 319 (534)
+..+...++..+...+..|+.|.++|..|+|| .+-+..++..++.+++.+.+. ..++..++.-++..++.........
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 45678888999999999999999999999665 455666666677777777774 3456667777888888888899999
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH--Hh-h---------------cccCchHHHHHHHHHHHHHHHHHH
Q 009469 320 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP--IL-I---------------QKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 320 ~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~--~l-~---------------~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
+++.+..++++-++..++-.....+|+.+.-++.- .+ . +...-|.++.+.++..++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 99999999988888888877777777766655431 11 1 122357777777777777777777
Q ss_pred HhhcCCCCCC-hhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChh
Q 009469 382 KKAYSSPKED-PELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLT 460 (534)
Q Consensus 382 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~ 460 (534)
...++.++.. +....-... -+.-...++++.+++.+..+.++.+++.=+..........|....+|++..
T Consensus 218 ~~v~~~~~~~~~~~~~l~~g---------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 218 LNVHDAEKISSPPPTALRNG---------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred hcccccccccccchHHHHHH---------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 7766655322 110000000 000123467788888899999999998889999999999999988999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 461 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 461 ~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
+..++.....+.+++|.++.|++.||+|.|+++.
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh
Confidence 9999999999999999999999999999997654
No 138
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=5.6e-12 Score=135.04 Aligned_cols=151 Identities=12% Similarity=0.142 Sum_probs=117.9
Q ss_pred HHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 226 MSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 226 ~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
....+|.+. +++|++..+.+++.+...++..++.++.|+++||+|+|+++.++.++..+..++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445566665 5889999999999999999999999999999999999999888877766665544433322344444445
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~ 376 (534)
++.++......+...+++.+.+|+++|++++|+++....+|..+||+++|.+.+.+||++.+.+.+....+.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~ 445 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFV 445 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 554443334456677889999999999999999999999999999999999999999998887665544433
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=1.7e-11 Score=126.10 Aligned_cols=163 Identities=17% Similarity=0.048 Sum_probs=116.0
Q ss_pred HHHHHhhhhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCch--HHHH------HHHHHHHHH
Q 009469 216 FLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP--VLGF------GVIWWSVAT 286 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~--~l~~------g~~~~~i~~ 286 (534)
.++.......+....|.+ .+++|.+..+.+++.+...++..++.+++|+++||+|||+ .... +.++..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 333344444455555554 5668999999999999999999999999999999999996 1111 111111111
Q ss_pred HHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHH
Q 009469 287 VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSV 365 (534)
Q Consensus 287 ~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~ 365 (534)
+.....+ +.+..+...++.+++.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..| |++.
T Consensus 304 ~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~ 380 (399)
T TIGR00893 304 FATNYVN--IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGA 380 (399)
T ss_pred HHhccch--hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHH
Confidence 1111111 23333333334444444 788999999999999999999999999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009469 366 FYSFGSLGSIWFALWL 381 (534)
Q Consensus 366 f~i~~~~~~i~~i~~~ 381 (534)
|++.+++.++..++.+
T Consensus 381 ~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 381 LMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888877766655543
No 140
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.40 E-value=1.5e-11 Score=127.29 Aligned_cols=155 Identities=11% Similarity=0.011 Sum_probs=134.3
Q ss_pred hhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
.....+....|.+.+++|.+..++|++.++..++..++.++.+++.||+|.|+.+.++.++..+..++.++++ +.+.+
T Consensus 219 ~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~~~~ 296 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--AFPLI 296 (382)
T ss_pred HHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--hHHHH
Confidence 3344444556666677999999999999999999999999999999999999999999999999999988887 78888
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~-~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~ 379 (534)
++..++.|+..+...+....++.+. |+++|+++.++++ ...++|.++||.++|++.+++|+ ..|++.+++.++..++
T Consensus 297 ~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 8999999999986 47789999999999999999986 6677777776654433
No 141
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.40 E-value=7.2e-12 Score=132.59 Aligned_cols=181 Identities=13% Similarity=0.108 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 286 (534)
..+...++..+.............|.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33333344444444444455566778888899999888999999999999999999999999999999999888888777
Q ss_pred HHHhh---hccC------ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 287 VLTPV---AARI------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (534)
Q Consensus 287 ~l~~~---~~~~------~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~ 357 (534)
+++++ .... ++..+....++.+.......+....++.|.+|+++|++++++......+|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66652 1111 12222222233222222334566677899999999999999999999999999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhcCC
Q 009469 358 QKFGWPSVFYSFGSLGSIWFALWLKKAYSS 387 (534)
Q Consensus 358 ~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~ 387 (534)
++.+|++.|++.++++++..++.++..++.
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecccC
Confidence 999999999998888877777666555543
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.39 E-value=2.2e-11 Score=126.04 Aligned_cols=152 Identities=16% Similarity=0.145 Sum_probs=124.9
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l 306 (534)
...+|.+.++.|.+..+++++.++..++..++.++.|++.||+|+|+++..+.++..++.+... . . ..++...++
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~-~~~~~~~~l 294 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--Q-AAMAPALFI 294 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--h-HHHHHHHHH
Confidence 3456777777899999999999999999999999999999999999999888888777665443 2 1 223456677
Q ss_pred HhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
.|++.....+...+.+.|..|+++++.+.+.+....++|..+||.++|++.+++||++.|++.+.+.++..+..++.
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 78777777889999999999888888888888889999999999999999999999999998888777665554444
No 143
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=3.2e-11 Score=125.41 Aligned_cols=158 Identities=13% Similarity=0.162 Sum_probs=127.5
Q ss_pred hhhHHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 222 DRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 222 ~~~~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
....+....|.+. +++|++..+.+++.+.+.++..++.++.|+++||+++|+++....++.++..++....+ +.+.+
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~ 297 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSHL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchHH
Confidence 3334445566654 67899999999999999999999999999999999999998888777777666665555 55556
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~ 380 (534)
.+..++.|++.+..++...++..+..| +++++..+.......+|..++|.+.|++.+..||+..+++.+++.++..+..
T Consensus 298 ~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 298 LYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 667788888877777887888888774 5578888998889999999999999999999999999998887776665544
Q ss_pred HH
Q 009469 381 LK 382 (534)
Q Consensus 381 ~~ 382 (534)
+.
T Consensus 377 ~~ 378 (394)
T PRK03699 377 IL 378 (394)
T ss_pred HH
Confidence 43
No 144
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.37 E-value=2.8e-11 Score=128.26 Aligned_cols=164 Identities=12% Similarity=0.043 Sum_probs=112.9
Q ss_pred hhhHHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--CCchHH-HHHHHHHHHHHHHHhhhccCCh
Q 009469 222 DRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKPVL-GFGVIWWSVATVLTPVAARIGL 297 (534)
Q Consensus 222 ~~~~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~--Grr~~l-~~g~~~~~i~~~l~~~~~~~~~ 297 (534)
..+.....+|.+. +++|.+..+.+++..++.++..++.++.|+++||+ +||+.. +....+..++.++..+....+.
T Consensus 268 ~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~ 347 (452)
T PRK11273 268 LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNP 347 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccCh
Confidence 3344455666654 55789999999999999999999999999999999 555432 2223333333333323222134
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHH-HHHHHHHhhcccCchHHHHHHHHHHHHH
Q 009469 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVT-GLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 298 ~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~i-gp~i~~~l~~~~gw~~~f~i~~~~~~i~ 376 (534)
+..+++.++.|.+..........+..|.+|+++||+++|+.+....+|+.+ +|.+.+.+.+++||++.|++.++.+++.
T Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~ 427 (452)
T PRK11273 348 TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILA 427 (452)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHH
Confidence 444445555555433333334456779999999999999999888888654 7999999999999999999888777666
Q ss_pred HHHHHHhhc
Q 009469 377 FALWLKKAY 385 (534)
Q Consensus 377 ~i~~~~~~~ 385 (534)
++......+
T Consensus 428 ~~~~~~~~~ 436 (452)
T PRK11273 428 VILLIVVMI 436 (452)
T ss_pred HHHHHHHhc
Confidence 555554444
No 145
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.36 E-value=3.4e-11 Score=126.84 Aligned_cols=167 Identities=13% Similarity=0.010 Sum_probs=114.5
Q ss_pred HhhhhHHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--CCc-hHHHHHHHHHHHHHHHHhhhccC
Q 009469 220 NMDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGK-PVLGFGVIWWSVATVLTPVAARI 295 (534)
Q Consensus 220 ~~~~~~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~--Grr-~~l~~g~~~~~i~~~l~~~~~~~ 295 (534)
......+....|.+. +++|++..+.++..+.+.++..++.++.|+++||+ ++| +......+...+..+........
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA 335 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc
Confidence 333344445556554 67899999999999999999999999999999999 333 32222221112111111111211
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i 375 (534)
+...+.+..++.|++...........+.|.+|+++|++++|+.+....+|..++|.+.+++.+..||+..|++.+++.++
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~ 415 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGI 415 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHH
Confidence 33333344444554433333344567789999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHhhcC
Q 009469 376 WFALWLKKAYS 386 (534)
Q Consensus 376 ~~i~~~~~~~~ 386 (534)
..+..+...++
T Consensus 416 ~~~~~~~~~~~ 426 (434)
T PRK11663 416 SALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHhh
Confidence 76666554443
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=9.8e-11 Score=121.73 Aligned_cols=166 Identities=13% Similarity=-0.001 Sum_probs=127.2
Q ss_pred hhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
..........|.+.+++|.+..+.++..+++.++..++.++.|++.||+|||+.+.++..+.+++.++....+. +...+
T Consensus 219 ~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~ 297 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHHH
Confidence 34444555566666678999999999999999999999999999999999999998888877777665543331 22222
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i~~~~~~i~~i 378 (534)
.-++.|++.+...+.......+.++ ++++++.+|+.+....++..++|.+.+++.+..| |...|++.++..++..+
T Consensus 298 --~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 --WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred --HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2345688878777877777777775 5689999999999999999999999999999876 77777777766666666
Q ss_pred HHHHhhcCCCC
Q 009469 379 LWLKKAYSSPK 389 (534)
Q Consensus 379 ~~~~~~~~~~~ 389 (534)
+.+...+++++
T Consensus 376 ~~~~~~~~~~~ 386 (393)
T PRK09705 376 ITLRFAPARFP 386 (393)
T ss_pred HHHHhcccccc
Confidence 65565555443
No 147
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.35 E-value=4.8e-11 Score=124.78 Aligned_cols=278 Identities=17% Similarity=0.119 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcc-hhHHHHHHH----HHHHHHHHHHHHHHHhhhCCchHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNST-TVGLIQSSF----FWGYLLTQIVGGIWADKFGGKPVLGFGVI 280 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~g~i~s~~----~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~ 280 (534)
+......++-.+..++.........+.....++.... ..+...... .+...+..+..|.++||+|||..+.+..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3444445555555555555555556665555544332 223333333 67788899999999999999999999999
Q ss_pred HHHHHHHHHhhhccCChHHHHHHHHHHhhc--ccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 281 WWSVATVLTPVAARIGLPFLLIMRAFMGIG--EGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 281 ~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig--~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
...+..++..+.. ||.++ +.|+. .+.......++++|....++|...+|+.......+.+++|.+++.+..
T Consensus 101 ~~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 101 GTILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9888888777765 44444 44432 245567888999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCc--cccccccccHHHhhcchhHHHHHHHHHHH
Q 009469 359 KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSI--SKEAVSVIPWKLILSKAPVWALIISHFCH 436 (534)
Q Consensus 359 ~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~l~~~~~ 436 (534)
..|.-.+|++.++..++..+..+...+++..+++... ........... .............-.+|..+.+++..++.
T Consensus 174 ~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~ 252 (463)
T KOG2816|consen 174 FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS 252 (463)
T ss_pred hcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHH
Confidence 9999999999988888888887777777654433321 00000000000 00000001111122345556555555555
Q ss_pred HHHHHHHHH-HHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHH-HHHHHhhccc
Q 009469 437 NWGTFILLT-WMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGG-WIADTLVSKG 491 (534)
Q Consensus 437 ~~~~~~~~~-~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g-~l~dr~g~r~ 491 (534)
......-.. .++.|+...++++..+.+.+.+.......++.++.. .+...++.++
T Consensus 253 ~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~ 309 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR 309 (463)
T ss_pred HHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 444433222 446777888999999999888898888888888865 7777788886
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.33 E-value=1.8e-11 Score=127.03 Aligned_cols=139 Identities=16% Similarity=0.196 Sum_probs=113.4
Q ss_pred HhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH-HHhhhccCChHHHHHHHH
Q 009469 228 IAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV-LTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 228 ~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~-l~~~~~~~~~~~ll~~r~ 305 (534)
...|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +..... +.+.+.+..+
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 336 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGA--NVAVLGLGLF 336 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCC--chHHHHHHHH
Confidence 33444 5567899999999999999999999999999999999999998888776543333 222323 5556666667
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHHHH
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYS 368 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i 368 (534)
+.|++.+...+...+++.|.+|+++|++++|+.+....+|..++|+++|.+.++.| |+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77777677777888999999999999999999999999999999999999999988 8776654
No 149
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.32 E-value=1.4e-10 Score=120.96 Aligned_cols=161 Identities=16% Similarity=0.210 Sum_probs=122.4
Q ss_pred HhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHH-HHHHHHHHHHHHHhhhc---cC
Q 009469 220 NMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAA---RI 295 (534)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~g~~~~~i~~~l~~~~~---~~ 295 (534)
...........|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+...++.+.+.+.+ ..
T Consensus 235 ~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 314 (402)
T TIGR00897 235 TIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGH 314 (402)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 334444556677777889999999999999999999999999999999999988764 33333333333332211 12
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i 375 (534)
+.+.+++..++.|++.+...+ ....+.+.. +++|++++|+.+....+|..++|.+++.+.+..||...+++.+++.++
T Consensus 315 ~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i 392 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVV 392 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 456667788888888776544 456667765 568999999999999999999999999999999999999998887776
Q ss_pred HHHHHHH
Q 009469 376 WFALWLK 382 (534)
Q Consensus 376 ~~i~~~~ 382 (534)
..++.++
T Consensus 393 ~~~~~~~ 399 (402)
T TIGR00897 393 SAFLTAF 399 (402)
T ss_pred HHHHHHH
Confidence 6655544
No 150
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.2e-11 Score=121.80 Aligned_cols=179 Identities=15% Similarity=0.096 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--CCchHH-HHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKPVL-GFGVIWWS 283 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~--Grr~~l-~~g~~~~~ 283 (534)
.+..+++..+..+..++.+.--.|. +.|..|.+....++..+++-++.+.+.+++|+++||+ |||..+ ++.+++..
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 3344555566666666666655554 5777899999999999999999999999999999996 666554 55666666
Q ss_pred HHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHH-HHHHHHHHHHHhhcccCc
Q 009469 284 VATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 284 i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~l-G~~igp~i~~~l~~~~gw 362 (534)
++.+...++++.|+.+..++-++.|+..-+..-.......|..|++.-|++.|+...+..+ |.+.+....+++.+.+||
T Consensus 333 ~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW 412 (448)
T COG2271 333 ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGW 412 (448)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCC
Confidence 6666777777667788889999999988888888888889999999999999999999998 899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC
Q 009469 363 PSVFYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~i~~~~~~~~ 386 (534)
...|+++.+.+++..++.+.....
T Consensus 413 ~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 413 DGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhh
Confidence 999998887777776666555443
No 151
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.32 E-value=1.9e-11 Score=129.60 Aligned_cols=155 Identities=15% Similarity=0.154 Sum_probs=124.2
Q ss_pred hhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh--CCchHHHH--HHHHHHHHHHHHhhhccCCh
Q 009469 222 DRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF--GGKPVLGF--GVIWWSVATVLTPVAARIGL 297 (534)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~--Grr~~l~~--g~~~~~i~~~l~~~~~~~~~ 297 (534)
........++.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.+++.+.+ ++
T Consensus 256 ~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~ 333 (455)
T TIGR00892 256 GFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--DY 333 (455)
T ss_pred HccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--hH
Confidence 333444556666677899999999999999999999999999999984 33433333 3333344444555555 67
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-CchHHHHHHHHHHHHH
Q 009469 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSIW 376 (534)
Q Consensus 298 ~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-gw~~~f~i~~~~~~i~ 376 (534)
+.+++.+++.|++.+...+...+++.+.+|++++++++|+++....+|..+||.++|.+.+.. +|++.|++.+++.++.
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHH
Confidence 888889999999999988999999999999999999999999999999999999999999887 5999999887766554
Q ss_pred HH
Q 009469 377 FA 378 (534)
Q Consensus 377 ~i 378 (534)
.+
T Consensus 414 ~~ 415 (455)
T TIGR00892 414 GL 415 (455)
T ss_pred HH
Confidence 44
No 152
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=1.1e-10 Score=122.37 Aligned_cols=144 Identities=13% Similarity=0.068 Sum_probs=108.3
Q ss_pred HHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHH
Q 009469 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 226 ~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~ 305 (534)
+...+|.+.++.|.++.+.+.+.++..++..++.+++|++.||+|||+.+..+.++..++.++.......+...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 44456777677899999999999999999999999999999999999999888877766655544333212322222222
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHH
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSF 369 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~ 369 (534)
..+++..+..+....++.|.+|+++||+++|+......+|+.++|.+.+++.+.+|+....++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 2223333334556678899999999999999999999999999999999999988876544433
No 153
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.31 E-value=1.5e-10 Score=123.51 Aligned_cols=167 Identities=15% Similarity=0.077 Sum_probs=124.2
Q ss_pred hhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCC--hHHH
Q 009469 223 RVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIG--LPFL 300 (534)
Q Consensus 223 ~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~--~~~l 300 (534)
.+......|.+.+++|.+....++......+...++.++.|+++||+|||++++++.++.+++.++++.....+ ....
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33444556778888998888778887788888899999999999999999999999999888887766442111 1122
Q ss_pred HHHHHHHhhcccc-hhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh------cccCchHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGV-AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI------QKFGWPSVFYSFGSLG 373 (534)
Q Consensus 301 l~~r~l~Gig~g~-~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~------~~~gw~~~f~i~~~~~ 373 (534)
+.+.++.+++.+. ..+....+++|.+|+++|++++|+......+|..+++.+.+.+. +.++|++.|++.+++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 2333444444433 23667899999999999999999999999999988876665443 5788999999888877
Q ss_pred HHHHHHHHHhhcCCCC
Q 009469 374 SIWFALWLKKAYSSPK 389 (534)
Q Consensus 374 ~i~~i~~~~~~~~~~~ 389 (534)
++.+++.+...++++.
T Consensus 447 ~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 447 VLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHhccccCCC
Confidence 7777666665555443
No 154
>PRK09952 shikimate transporter; Provisional
Probab=99.30 E-value=1.4e-10 Score=122.24 Aligned_cols=159 Identities=16% Similarity=0.047 Sum_probs=113.9
Q ss_pred hHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh--ccCChHHH
Q 009469 224 VNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA--ARIGLPFL 300 (534)
Q Consensus 224 ~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~--~~~~~~~l 300 (534)
+......|. +.+++|.+......+..+..+...++.+++|+++||+|||+++.++.++.+++.+.+... ...+.+.+
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIV 346 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 333444444 456788888766666666677778888999999999999999888877665554333221 11124444
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHH-HHHHHHHHHHHHHHHhhccc--CchHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWF 377 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~-~~~lG~~igp~i~~~l~~~~--gw~~~f~i~~~~~~i~~ 377 (534)
++..++.+++.+...+...++++|.+|++.|+.+.++.+. +..+|+.++|.+.+++.+.. +|...+...++..++..
T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~ 426 (438)
T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA 426 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 5556666788787788889999999999999999998655 45589999999999998754 47777776666666555
Q ss_pred HHHHH
Q 009469 378 ALWLK 382 (534)
Q Consensus 378 i~~~~ 382 (534)
+..+.
T Consensus 427 v~~~~ 431 (438)
T PRK09952 427 MTALL 431 (438)
T ss_pred HHHHH
Confidence 55443
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.29 E-value=1.3e-09 Score=116.68 Aligned_cols=155 Identities=15% Similarity=0.142 Sum_probs=118.9
Q ss_pred hHHHHHhhhCCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH---hhhccCChHHHHHHH
Q 009469 229 AILPMSKEFNWNSTTVGLIQS-SFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAARIGLPFLLIMR 304 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s-~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~---~~~~~~~~~~ll~~r 304 (534)
..|.+.+++|++..+++++.. ...++..++.+++|+++||+|+|+.+.++.++.++..+++ +... .+.+.+.+.-
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~~~~~l~~~~ 323 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-KNLYSMGAAV 323 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHH
Confidence 344456778999999999874 6678999999999999999999988777666555544332 2222 2444445555
Q ss_pred HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhh
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
++..+..+...+...++..+..+++.+++.+++.+...++|..+++.++|.+.+.+||+..|.+.+++.++..++....+
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555556777888899999999999999999999999999999999999999999999888877777666555543
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=2.7e-10 Score=115.29 Aligned_cols=177 Identities=15% Similarity=0.189 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 286 (534)
.+........+........++..-|.+.+..|.+...++++...+.++..++.+++|+++|| +.|+.+....++.++..
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~ 290 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL 290 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHH
Confidence 33333333334444455556667777888889999999999999999999999999999999 99999988888888877
Q ss_pred HHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH
Q 009469 287 VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF 366 (534)
Q Consensus 287 ~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f 366 (534)
+.+.+..+ +.+..++.-++.|++.+.........+++ .-++.+..+.++.....++|..+|..++|.+.+++|+....
T Consensus 291 l~l~~~~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~ 368 (394)
T COG2814 291 LALTFTGA-SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATG 368 (394)
T ss_pred HHHHHhcc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 77766653 45566677777888777666666666666 33789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 009469 367 YSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 367 ~i~~~~~~i~~i~~~~~~~~ 386 (534)
++.+++.++..++.+...+.
T Consensus 369 ~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 369 WVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99998888877776655443
No 157
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=3.3e-10 Score=119.42 Aligned_cols=147 Identities=16% Similarity=0.145 Sum_probs=104.8
Q ss_pred HHHhhhhHHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH-HH-hhhcc
Q 009469 218 LCNMDRVNMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV-LT-PVAAR 294 (534)
Q Consensus 218 ~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~-l~-~~~~~ 294 (534)
.............|.+. +.+|.+..+.++....+.++..++.+++|+++||+|||++++++.++.++..+ .. .....
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33344445555566654 45799999999999899999999999999999999999988776554433221 11 11122
Q ss_pred CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHH-HHHHHHHHHHHHHHHhhcccCchH
Q 009469 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKFGWPS 364 (534)
Q Consensus 295 ~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~-~~~lG~~igp~i~~~l~~~~gw~~ 364 (534)
.++..+.+..++.|++.+...+....++.|.+|++.|+.++++... +..+++.++|.+.+++.+..|+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 2343344445555666666666677889999999999999999655 444567889999999999888643
No 158
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.25 E-value=4.2e-10 Score=116.45 Aligned_cols=147 Identities=17% Similarity=0.083 Sum_probs=122.1
Q ss_pred HHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHH
Q 009469 226 MSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 226 ~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~ 305 (534)
.....+.+.++.|.+..++|++.+...++..+..++.|++.||+|+|+.+.++.++.+++.++.+..+ +.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Confidence 33344555567899999999999999999999999999999999999999999999888887777777 7888888999
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHH-HHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVY-SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~-~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~ 376 (534)
+.|++.+...+....++.+. +++++++..+++. ....+|..+||.++|.+.+.+|+ ..|+..+++.++.
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 99999998888888888887 5667789999886 55678889999999999999887 4666666555443
No 159
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.23 E-value=2.9e-10 Score=121.45 Aligned_cols=153 Identities=14% Similarity=0.162 Sum_probs=135.7
Q ss_pred HHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHH
Q 009469 227 SIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 227 ~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~ 305 (534)
...+|.+ .+.+|.++..+|++.+.+.+|.+++.++.+++.+|+++++++..+.++++++.+.+++++ +.+..++..+
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~l~ 315 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIALF 315 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHHHH
Confidence 3456665 467899999999999999999999999999999999999999999999999999999888 7888888889
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
+.|++.........+.+.+..|++.||++++++.+....+..+|.++.|.+.+.+|.+.++.+.++..++..++.+
T Consensus 316 l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 316 LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888899999999999999999999999999999999999999999999999998877766555554444
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.23 E-value=1.1e-10 Score=119.03 Aligned_cols=133 Identities=17% Similarity=0.265 Sum_probs=117.6
Q ss_pred HhHHHHHhh-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH
Q 009469 228 IAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (534)
Q Consensus 228 ~~~~~~~~~-~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l 306 (534)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++.++..+.+. +.+.+++..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP-NFPLFLVLWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHH
Confidence 556666554 8999999999999999999999999999999999999999888888877777777663 37778888999
Q ss_pred HhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
.|++.+...+...+++.|.+|+++|++++|+.+....+|..++|.++|.+.+.+|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988654
No 161
>TIGR00895 2A0115 benzoate transport.
Probab=99.23 E-value=1.7e-10 Score=119.14 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=111.8
Q ss_pred HHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc
Q 009469 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR 294 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~ 294 (534)
..++............|.+.+++|.+..+.+++.++..++..++.++.|++.||+|+|+.+....+......++.....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 336 (398)
T TIGR00895 258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF- 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh-
Confidence 3334444444555667788888999999999999999999999999999999999999554444433333333332233
Q ss_pred CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 295 IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (534)
Q Consensus 295 ~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l 356 (534)
+.+.+++..++.|++.+...+...+++.+.+|+++|++++|+......+|..+||.++|++
T Consensus 337 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 337 -SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 5666778888999999999999999999999999999999999999999999999999876
No 162
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.23 E-value=7.6e-10 Score=116.96 Aligned_cols=175 Identities=15% Similarity=0.138 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHhh-hhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCc--hHHHHHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMD-RVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK--PVLGFGVIWWS 283 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l~~g~~~~~ 283 (534)
+.+....++.++..-+ .+++.....+..+++|++..+...+..+..+..++|.+++|++.||+|.| ++++++.+++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 3344444444443333 33444445556779999999999999999999999999999999999999 88888887775
Q ss_pred HHHHHHhh--------hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 009469 284 VATVLTPV--------AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI 355 (534)
Q Consensus 284 i~~~l~~~--------~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~ 355 (534)
+..+...+ .. +.+.+++..++.|++.|..++..-++.+++.|+++.+..+|++....-....+||++.+.
T Consensus 361 ~i~~~g~~G~~~~~~g~~--~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLK--SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHHHHhhhcccCcc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444333 23 567788999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccC-chHHHHHHHHHHHHHHHHHHHh
Q 009469 356 LIQKFG-WPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 356 l~~~~g-w~~~f~i~~~~~~i~~i~~~~~ 383 (534)
+.+..| -|+.+....++.++.+++.+..
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999886 7888887777776666665443
No 163
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.21 E-value=2.4e-10 Score=117.09 Aligned_cols=143 Identities=16% Similarity=0.123 Sum_probs=104.3
Q ss_pred hHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCC-chH-HHHHH-HHHHHHHHHHhhhccCChHH
Q 009469 224 VNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPV-LGFGV-IWWSVATVLTPVAARIGLPF 299 (534)
Q Consensus 224 ~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~-l~~g~-~~~~i~~~l~~~~~~~~~~~ 299 (534)
..+....|. +.+.+|.+..+.+++.+...++..++.++.|++.||+++ |+. +.... ....++..+.......+...
T Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLM 312 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHH
Confidence 334444454 456789999999999999999999999999999998643 332 22211 22222222222222224455
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF 366 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f 366 (534)
+++..++.|+......+....++.|.+|+++|+++.|+++....+|..++|.+.|.+.+.+||++.|
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 313 DLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 5666677777666666667788999999999999999999999999999999999999999998754
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.21 E-value=8.3e-10 Score=114.79 Aligned_cols=142 Identities=9% Similarity=0.077 Sum_probs=120.2
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhH
Q 009469 238 NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPA 317 (534)
Q Consensus 238 g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~ 317 (534)
+.+....|++.++..+...++.++.|++.||+|+|+.+.++.++.++..++...++ +.+.+++..++.|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--TALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHH
Confidence 45566789999999999999999999999999999999999998888887777766 6777788899999987776666
Q ss_pred HHHHHhhhccCCcchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 318 MNNMLSKWIPVSERSRSLAF-VYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 318 ~~~~i~~~~~~~~rg~~~gi-~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
...++.+..+++.+++..+. ++....+|..+++.++|++.+.+||+..|++.+++.++..++..
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77778888888888887766 66789999999999999999999999999998888777665544
No 165
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.20 E-value=4e-10 Score=118.88 Aligned_cols=163 Identities=13% Similarity=0.045 Sum_probs=111.1
Q ss_pred HHHHhHHHHH-hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH---HHHHHHhhhccCChHHH
Q 009469 225 NMSIAILPMS-KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS---VATVLTPVAARIGLPFL 300 (534)
Q Consensus 225 ~~~~~~~~~~-~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~---i~~~l~~~~~~~~~~~l 300 (534)
.+....|.+. +..|.++.+.++...++.++..++.+++|+++||+++++....+.++.. ++.+++...+..+.+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 3444556554 4579999999999999999999999999999999975432223332221 12222222221133333
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHH-HHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLG-SVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG-~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~ 379 (534)
.+..++.|++.............+.+|+++|++++|+.+....+| .+++|.+.|.+.+..||.+.|++.+++.++..+.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 344455555433332333456789999999999999998887776 4789999999999999999999888777777666
Q ss_pred HHHhhcCC
Q 009469 380 WLKKAYSS 387 (534)
Q Consensus 380 ~~~~~~~~ 387 (534)
.+...+++
T Consensus 429 ~~~~~~~~ 436 (438)
T TIGR00712 429 LIVVMIGE 436 (438)
T ss_pred HHHHHhhc
Confidence 66665543
No 166
>PRK10504 putative transporter; Provisional
Probab=99.20 E-value=4.5e-10 Score=119.56 Aligned_cols=141 Identities=16% Similarity=0.162 Sum_probs=115.4
Q ss_pred hhhHHHHhHHHHHh-hhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc-cCChHH
Q 009469 222 DRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-RIGLPF 299 (534)
Q Consensus 222 ~~~~~~~~~~~~~~-~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~-~~~~~~ 299 (534)
.........|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|+|+++.++.++.+++.++..+.. ..+.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (471)
T PRK10504 276 GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYL 355 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHH
Confidence 33445556666655 5899999999999999999999999999999999999999999888887776665543 123444
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
+.+..++.|++.+...+....++.+.+|+++++.++++.+....+|..+|+.+++.+.+..|+
T Consensus 356 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 356 LPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455667788888888888999999999999999999999999999999999999998876654
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.19 E-value=6.9e-10 Score=115.17 Aligned_cols=150 Identities=17% Similarity=0.115 Sum_probs=113.0
Q ss_pred hHHHHHhhhCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh-hc---cCChHHHHHH
Q 009469 229 AILPMSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV-AA---RIGLPFLLIM 303 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~-~~---~~~~~~ll~~ 303 (534)
..+.+.++.|+++.++|++.....+ ...++.++.|++.||+|+|+.+.++.++.++..+.... .. ..+...++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 4455556789999999999888764 66677899999999999999988877665333322221 11 1123334444
Q ss_pred HHHHhhcccchhhHHHHHHhhhccC-CcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Q 009469 304 RAFMGIGEGVAMPAMNNMLSKWIPV-SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 304 r~l~Gig~g~~~~~~~~~i~~~~~~-~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i 378 (534)
.++.+++.+...+...+.+.+..++ +++++.+++.++..++|..+||.++|.+.+..|++..|++.+++.++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 5556667777777888888788766 78999999999999999999999999999999999999887766655443
No 168
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.18 E-value=1.8e-09 Score=108.33 Aligned_cols=156 Identities=8% Similarity=0.072 Sum_probs=118.0
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHh---hhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH
Q 009469 212 CFSAFLLCNMDRVNMSIAILPMSK---EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l 288 (534)
..+..++.......+....+.+.+ .+|+++.+.++..+.+..+..++.++.+++.||+|+|+++.++.++.+++.++
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l 224 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG 224 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 344444444344444444444433 36999999999999999999999999999999999999998888888777765
Q ss_pred HhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 009469 289 TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYS 368 (534)
Q Consensus 289 ~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i 368 (534)
....+ +... +..-++.|++.+..+|...+...+.+|+ +.+.+.++. ....+|++++|++.|.+.+..|.++.|++
T Consensus 225 ~~~~~--~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 225 AALTH--GYVA-MWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHcC--CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 55544 3332 3355578999999999999999998854 456677775 56679999999999999999998888875
Q ss_pred HHHH
Q 009469 369 FGSL 372 (534)
Q Consensus 369 ~~~~ 372 (534)
..+.
T Consensus 300 ~~~~ 303 (310)
T TIGR01272 300 PVPC 303 (310)
T ss_pred HHHH
Confidence 4433
No 169
>PRK10054 putative transporter; Provisional
Probab=99.18 E-value=4.9e-10 Score=116.54 Aligned_cols=152 Identities=14% Similarity=0.125 Sum_probs=123.0
Q ss_pred hhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccch
Q 009469 235 KEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVA 314 (534)
Q Consensus 235 ~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~ 314 (534)
++.+.+...++++.+.+.+......++.|++.||+++|+.+.++.++..++.++..+..+ +.+.+++..++.|+|.+..
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 315 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN-SLLLWGMSAAVFTVGEIIY 315 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch-HHHHHHHHHHHHHHHHHHH
Confidence 445667777888888888888888899999999999999999998888888777765431 5666777888999998887
Q ss_pred hhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCC
Q 009469 315 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSP 388 (534)
Q Consensus 315 ~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~ 388 (534)
.+.....+.+..|++.|+++++..+ ...+|..+||.++|.+.++.|....|++.+....+..++.+...+++|
T Consensus 316 ~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 316 APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 8888899999999999999998765 566899999999999999999888888877776666666554444443
No 170
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.17 E-value=2e-09 Score=113.41 Aligned_cols=159 Identities=11% Similarity=0.038 Sum_probs=100.6
Q ss_pred hhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh--hhccCChHH
Q 009469 223 RVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP--VAARIGLPF 299 (534)
Q Consensus 223 ~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~--~~~~~~~~~ 299 (534)
.+.+...+|.+ .+++|.+..+.++..++..++..++.++.|+++||+|||+++.++.++.++..+... .....+...
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 33444555654 566899998999988888888889999999999999999988776665443332221 111112222
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHH-HHHHHHHHHHHhhcccC-chHHHHHHHHHHHHHH
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWF 377 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~l-G~~igp~i~~~l~~~~g-w~~~f~i~~~~~~i~~ 377 (534)
.+..-.+.+++.+...+....+++|++|++.|++++|+.+....+ ++...|.+.+.+ +..| |...+++.++..++..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHH
Confidence 222222222333334455678899999999999999998875553 344578877755 4455 5445555544444444
Q ss_pred HHHHH
Q 009469 378 ALWLK 382 (534)
Q Consensus 378 i~~~~ 382 (534)
+..++
T Consensus 418 ~~~~~ 422 (432)
T PRK10406 418 LVSLM 422 (432)
T ss_pred HHHHH
Confidence 44333
No 171
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.16 E-value=1e-08 Score=98.38 Aligned_cols=178 Identities=13% Similarity=0.108 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
||..+........ .....+.++.+-|.+++.+|++..+...+.+...+|..+ .++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~-~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQL-CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHH-hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4666555555443 445677888999999999999999999999999999886 58889999999999999999999999
Q ss_pred HHHHHhhhcc-----CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 285 ATVLTPVAAR-----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (534)
Q Consensus 285 ~~~l~~~~~~-----~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~ 359 (534)
|..+..++-+ .++|.+.+..++.|.+.+....+......+.|| ++||++.|+.-...++++.+-..+...+...
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 9988776531 356777777778788777766777777778895 6899999999999999998887777766654
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhcC
Q 009469 360 FGWPSVFYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 360 ~gw~~~f~i~~~~~~i~~i~~~~~~~~ 386 (534)
-.-. -+.+.+....++.++...+.+.
T Consensus 158 ~~~~-fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 158 DPSS-FLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred ChHH-HHHHHHHHHHHHHHHHhhheec
Confidence 2222 2333444444443434344443
No 172
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.15 E-value=4.4e-09 Score=109.39 Aligned_cols=148 Identities=12% Similarity=0.039 Sum_probs=115.4
Q ss_pred hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHH-HHHHHHHHhhhccCChHHHHHHHHHH
Q 009469 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIW-WSVATVLTPVAARIGLPFLLIMRAFM 307 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~-~~i~~~l~~~~~~~~~~~ll~~r~l~ 307 (534)
..|.+.+++|++..+.+++...+.++..++.++.+++.||.+ |+.++.+.++ .....++..... +.+.+.+..++.
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~ 315 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGS--DKIVATGVAIIW 315 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHH
Confidence 346677888999999999999999999999999999999964 4444444444 333334434444 566777788899
Q ss_pred hhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Q 009469 308 GIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (534)
Q Consensus 308 Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~ 380 (534)
|++.+...+...+++.+..| ++++++.++......+|..+||.++|.+.+..|++..++..+++.++..++.
T Consensus 316 G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 316 GLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHH
Confidence 99998888888889998885 5677888888888899999999999999999999988887766655544433
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.15 E-value=3.7e-09 Score=110.27 Aligned_cols=157 Identities=13% Similarity=0.017 Sum_probs=118.4
Q ss_pred HhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc---cCChHHHHHH
Q 009469 228 IAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA---RIGLPFLLIM 303 (534)
Q Consensus 228 ~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~---~~~~~~ll~~ 303 (534)
...|. +.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+.. ..+++.+++.
T Consensus 236 ~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 236 ALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 33444 4567899999999988888888999999999999999999999998888877776665432 2245556777
Q ss_pred HHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 304 RAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 304 r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
.++.|++.+...+......... ++++||++.++++....+|..+|+.+++.+.+..++....+..++..++..++....
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8888998887766666655444 458999999999999999999999999999888887665555444444443333333
Q ss_pred hc
Q 009469 384 AY 385 (534)
Q Consensus 384 ~~ 385 (534)
.+
T Consensus 395 ~~ 396 (406)
T PRK15402 395 LK 396 (406)
T ss_pred hc
Confidence 33
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.14 E-value=1.9e-09 Score=113.52 Aligned_cols=122 Identities=14% Similarity=0.197 Sum_probs=104.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHH
Q 009469 240 NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMN 319 (534)
Q Consensus 240 s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~ 319 (534)
+....+++.++..++..++.+++++++||+|+|+++.++.++.+++.++..+.++ +.+.+++..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS-NLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888889999999999999999999999999999888888777666532 456677777888999998888999
Q ss_pred HHHhhhcc-------CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 320 NMLSKWIP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 320 ~~i~~~~~-------~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
++++|..+ ++++|.++|+++....+|..+++.+.+.+.+..||
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99998865 45679999999999999999999999999887766
No 175
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.13 E-value=1.3e-09 Score=117.18 Aligned_cols=165 Identities=13% Similarity=-0.011 Sum_probs=108.6
Q ss_pred hhhHHHHhHHHHHhhhCCCcchhHH------------HHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH
Q 009469 222 DRVNMSIAILPMSKEFNWNSTTVGL------------IQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT 289 (534)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~s~~~~g~------------i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~ 289 (534)
..+......|.+.++.|.+....+. ...+..++..++.++.++++||+|||++++++.++.+++.++.
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 3334444577777788876543221 2333445666788899999999999999988888777766655
Q ss_pred hhhcc--CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc--------
Q 009469 290 PVAAR--IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------- 359 (534)
Q Consensus 290 ~~~~~--~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-------- 359 (534)
++... .+...+...-+...++.....+....+.+|.+|++.|++++|+.+....+|.+++|.+.+.+.+.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 462 (502)
T TIGR00887 383 GFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYP 462 (502)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccc
Confidence 54321 01111111111112222233456677789999999999999999999999999999999998874
Q ss_pred --cCchHHHHHHHHHHHHHHHHHHHhhcCC
Q 009469 360 --FGWPSVFYSFGSLGSIWFALWLKKAYSS 387 (534)
Q Consensus 360 --~gw~~~f~i~~~~~~i~~i~~~~~~~~~ 387 (534)
.++...|++.+++.++..+.. ++.|++
T Consensus 463 ~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt 491 (502)
T TIGR00887 463 TGIWMGHVLEIFALFMFLGILFT-LLIPET 491 (502)
T ss_pred ccccchHHHHHHHHHHHHHHHHh-eEeccC
Confidence 345567777777766655543 344543
No 176
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.13 E-value=5.6e-08 Score=106.33 Aligned_cols=158 Identities=21% Similarity=0.269 Sum_probs=128.1
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHHHHHHHHHHhhhccC------ChHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAARI------GLPF 299 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~~~i~~~l~~~~~~~------~~~~ 299 (534)
..+..++.+.+|++......+...+.....+.++++|+++|+ +|+++.+.++.+++.++.++.++.... ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 344556667789999999999999999999999999999997 699999999999999999888765311 1223
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCC---cchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------cCchHHHHHH
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVS---ERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------FGWPSVFYSF 369 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~---~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-------~gw~~~f~i~ 369 (534)
.+++-.+.++|.|+.-+...+...|.++++ +|-..+.+++.+.++|..+++.+.+++.+. .+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 566777788899999999999999999754 366788889999999999999999988744 3699999988
Q ss_pred HHHHHHHHHHHHHhh
Q 009469 370 GSLGSIWFALWLKKA 384 (534)
Q Consensus 370 ~~~~~i~~i~~~~~~ 384 (534)
+++.++.++++....
T Consensus 168 ~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 168 AILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHHhc
Confidence 888887777665543
No 177
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.13 E-value=4.7e-08 Score=99.57 Aligned_cols=292 Identities=12% Similarity=0.093 Sum_probs=192.2
Q ss_pred HhHHHHHhh-hCCCcchhH-HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHH
Q 009469 228 IAILPMSKE-FNWNSTTVG-LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 228 ~~~~~~~~~-~g~s~~~~g-~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~ 305 (534)
...|++.+. .|++..++. -+.-+..-.+.+..++...+.|..|.|++++++.+...+..+++.+.+ +...+-+.-+
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q~ 102 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQF 102 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHHH
Confidence 344555554 788888875 366666677778888999999999999999999999998888888888 8889999999
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc--CchHHHHHHHHHHHHHHHHHHHh
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF--GWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~--gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
+.|++.+. ..+..+++-...|+++--++.+...++.-+|..++.+++..+...- ++....++......+.+++.+++
T Consensus 103 ~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 103 FYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998775 5778899999999999999999999999999999999998887643 34555454444444444444443
Q ss_pred hcCCCC-----CChhhh---HHHHhhhhC---C-----Cccc--ccc-------ccccHHHhhcchhHHHHHHHHHHHHH
Q 009469 384 AYSSPK-----EDPELR---AEEKRHILG---G-----SISK--EAV-------SVIPWKLILSKAPVWALIISHFCHNW 438 (534)
Q Consensus 384 ~~~~~~-----~~~~~~---~~~~~~~~~---~-----~~~~--~~~-------~~~~~~~ll~~~~~~~~~l~~~~~~~ 438 (534)
++.++. ..+... +.+.....+ . .... ... -...++...++|.++...+...+...
T Consensus 182 P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atc 261 (412)
T PF01770_consen 182 PMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATC 261 (412)
T ss_pred CCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 322110 000000 000000000 0 0000 000 12345566778888888888888888
Q ss_pred HHHHHHHHHHHHHHHh--hCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 439 GTFILLTWMPTYYNQV--LKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQL 516 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~--~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~ 516 (534)
+++.+.+|......+. -+-...-.|.+-+...+.+.++.+..|++-.++.+..- ..+.+..++.+..++..
T Consensus 262 gy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~-------l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 262 GYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGE-------LALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 8888888888777764 12334446777778888888888888888444444322 23334444444455555
Q ss_pred ccccchhHHHHhh
Q 009469 517 SHVRTPAMAVLCM 529 (534)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (534)
....+.+...+..
T Consensus 335 ~~t~~Iwv~Y~~y 347 (412)
T PF01770_consen 335 SFTGNIWVCYAGY 347 (412)
T ss_pred HHhhHHHHHHHHH
Confidence 5666665544433
No 178
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.11 E-value=2.4e-09 Score=109.52 Aligned_cols=150 Identities=9% Similarity=0.057 Sum_probs=130.3
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhH
Q 009469 238 NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPA 317 (534)
Q Consensus 238 g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~ 317 (534)
+.+...+|.+.++..+.-++...+..++.+|+|.|+.++++.+++++=.+++++++ +.+.+.+.+.+.|+-.+....+
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~~~i~~~klLH~~e~~l~lva 332 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NPWVISLIKLLHALEFPLLLVA 332 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--chHHHHHHHHHHHHHHHHHHHH
Confidence 44567799999999999999999999999999999999999999999999999999 8899999999999999999999
Q ss_pred HHHHHhhhccCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 009469 318 MNNMLSKWIPVSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPK 389 (534)
Q Consensus 318 ~~~~i~~~~~~~~rg~~~gi~-~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~ 389 (534)
..-++++.+|++-.++...+. +...++|.++.+.++|.+.++.|.+.+|++++.+.++..++..+..+++++
T Consensus 333 ~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 333 AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 999999999988888888884 578899999999999999999999999999999888777777776655443
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.11 E-value=5.8e-09 Score=108.10 Aligned_cols=168 Identities=17% Similarity=0.242 Sum_probs=130.7
Q ss_pred HHHhhhhHHHHhHHHHHhhhC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCC
Q 009469 218 LCNMDRVNMSIAILPMSKEFN-WNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIG 296 (534)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~ 296 (534)
+.......+..+.+.+.++.| .+....+.+.++..+.-++.-.+.+++..|+|.|+++.++.+.+++=..+++...+ +
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~-~ 296 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD-P 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 334444455556666677777 77888888889999999999999999999999999999999999998888887732 3
Q ss_pred hHHHHH----HHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHH-HHHHHHHHHHHHHHHhhcccCchH------H
Q 009469 297 LPFLLI----MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKFGWPS------V 365 (534)
Q Consensus 297 ~~~ll~----~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~-~~~lG~~igp~i~~~l~~~~gw~~------~ 365 (534)
.+..++ ...+.|+..+..+.+...++.+.+|++.|+++.+++.+ ..++|.++|..++|++.+++|-+. .
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 333332 34568999999999999999999999999999999887 578999999999999999877443 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcC
Q 009469 366 FYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 366 f~i~~~~~~i~~i~~~~~~~~ 386 (534)
+.+.+++.++..++++.+.|+
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 444555555555555544443
No 180
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.11 E-value=5.7e-09 Score=108.04 Aligned_cols=152 Identities=12% Similarity=0.009 Sum_probs=109.8
Q ss_pred hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHh
Q 009469 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMG 308 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~G 308 (534)
..|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++.++.+++.++.....+ +.+..++..++.+
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~ 300 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG-MKTASLIFAFICC 300 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHH
Confidence 345566678999999999999999999999999999999999999999888887777765544321 3445555666666
Q ss_pred hcccchhhHHHH-HHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHHHHHHHHHHHHHHHh
Q 009469 309 IGEGVAMPAMNN-MLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 309 ig~g~~~~~~~~-~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
++.....++... ...+..+++.++.+ .......+|..+||.++|++.+. .+|++.+++.+++.++........
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 665444444443 34444444444444 34667889999999999999985 689999988776665554444433
No 181
>TIGR00898 2A0119 cation transport protein.
Probab=99.10 E-value=2.4e-09 Score=115.04 Aligned_cols=136 Identities=14% Similarity=0.007 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhh
Q 009469 246 LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKW 325 (534)
Q Consensus 246 ~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~ 325 (534)
+...+..+...++.++.+++.||+|||+++.++.++.+++.++..+.+..+.+..++..++.+++.+..++....+.+|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566777888999999999999999999999988888877776633334455555666777777788889999999
Q ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 326 IPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 326 ~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
+|++.|++++|+.+....+|.+++|.+.+ + ...++...+++.+++.++..++.++.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999998 4 34556677777777766665555443
No 182
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.09 E-value=3.6e-09 Score=110.33 Aligned_cols=148 Identities=14% Similarity=0.199 Sum_probs=106.1
Q ss_pred HHHHHhhhCCCcchhHHHHHHH-HHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH---hhhccCChHHHHHHH-
Q 009469 230 ILPMSKEFNWNSTTVGLIQSSF-FWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAARIGLPFLLIMR- 304 (534)
Q Consensus 230 ~~~~~~~~g~s~~~~g~i~s~~-~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~---~~~~~~~~~~ll~~r- 304 (534)
.+.+.+++|+++.+++++.+.. .++..++.+++|++.||+|+|+.+.++.++.++..+.. ++.++ +.+.+++.-
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPK-HLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHH
Confidence 3456677899999999988665 45688999999999999999998877776665554333 33321 445444444
Q ss_pred ---HHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 305 ---AFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 305 ---~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
++.|++.+...+....++.+.+|.+ ..+++....++|..+++.++|.+.+.+||++.|.+.++++++..++..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 3455556666667777777777644 455666666788877777999999999999999988887777655544
Q ss_pred H
Q 009469 382 K 382 (534)
Q Consensus 382 ~ 382 (534)
.
T Consensus 388 ~ 388 (402)
T PRK11902 388 L 388 (402)
T ss_pred H
Confidence 3
No 183
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.07 E-value=4.2e-09 Score=124.46 Aligned_cols=144 Identities=16% Similarity=0.209 Sum_probs=120.5
Q ss_pred HHHHHhhhCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHh
Q 009469 230 ILPMSKEFNWNST-TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMG 308 (534)
Q Consensus 230 ~~~~~~~~g~s~~-~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~G 308 (534)
.+++.+.+|.+.. +.+++.++..++.+++.+++|++.||+++++++.++.++.+++.+++.+.. +.+.++++.++.|
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g 333 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVLFFLFG 333 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHH
Confidence 3445677899998 999999999999999999999999999999999888888888888777776 6777888889999
Q ss_pred hcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHHHHHHHH
Q 009469 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK-FGWPSVFYSFGSLGSI 375 (534)
Q Consensus 309 ig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-~gw~~~f~i~~~~~~i 375 (534)
++.+...+...+++.+.+|++.||+++|+.+....+|.++++.+++.+... +++...|++.+.+.++
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999988889999999999999999999999999999998888888776542 3455556655544433
No 184
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.07 E-value=3e-09 Score=111.34 Aligned_cols=158 Identities=14% Similarity=0.130 Sum_probs=108.9
Q ss_pred HHHHHHHhhhhHHHHhHHHHHhhh--CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchH-HHHHHHHHHHHHHHHh
Q 009469 214 SAFLLCNMDRVNMSIAILPMSKEF--NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPV-LGFGVIWWSVATVLTP 290 (534)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~-l~~g~~~~~i~~~l~~ 290 (534)
+.+++.....+.+...+|.+.+++ +.+..+.++......++..++.+++|+++||+++|+. +....++..++.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~ 328 (412)
T TIGR02332 249 LAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS 328 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH
Confidence 333444444555666777777664 5677888999999999999999999999999997774 3444444444332222
Q ss_pred hhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHHHHH
Q 009469 291 VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSF 369 (534)
Q Consensus 291 ~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i~ 369 (534)
... +....+++-.+.++|.....+.......+.+|+++|++++|+.+....+|.+++|.+.+.+.+..| |++.|++.
T Consensus 329 ~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~ 406 (412)
T TIGR02332 329 ATD--HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFV 406 (412)
T ss_pred hcC--CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHH
Confidence 222 222222222233333333334444555678999999999999999999999999999999999875 99998876
Q ss_pred HHHH
Q 009469 370 GSLG 373 (534)
Q Consensus 370 ~~~~ 373 (534)
+++.
T Consensus 407 ~~~~ 410 (412)
T TIGR02332 407 AALL 410 (412)
T ss_pred HHHH
Confidence 6543
No 185
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.06 E-value=3.2e-09 Score=111.43 Aligned_cols=264 Identities=13% Similarity=0.097 Sum_probs=167.8
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC-----CchHHHHHHHHHHHHHHHHhhhcc--CChHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG-----GKPVLGFGVIWWSVATVLTPVAAR--IGLPF 299 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~g~~~~~i~~~l~~~~~~--~~~~~ 299 (534)
....+.+.+++|+++.+.....++..+... .-+++|.++|-+. ||+-++++.++.+++.+.++..+. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 445677899999999999998888888875 4677799999863 556677777777666666655442 23555
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhcc--CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHH
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIP--VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWF 377 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~--~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~ 377 (534)
..+.-++..+|.+....++-+++.|... ++.||...+.......+|.+++..++|.+.+..++++.|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 6667778888889999999999999884 33478888899999999999999999999999999999998888877776
Q ss_pred HHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhC
Q 009469 378 ALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALII-SHFCHNWGTFILLTWMPTYYNQVLK 456 (534)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~~~~~~g 456 (534)
+..+...++++............+................+..++.+.+|...+ ..++............-.+..+..+
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~ 248 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALG 248 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccc
Confidence 666665554211111100000000000000000111234455667777776655 2222222111110101112223345
Q ss_pred ---CChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 457 ---FNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 457 ---~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
+++...+.+..+..++.++|..+......+..-|+
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~ 286 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRR 286 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 78888887776666777777776665554544443
No 186
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.05 E-value=2.5e-09 Score=114.05 Aligned_cols=151 Identities=15% Similarity=0.005 Sum_probs=103.0
Q ss_pred hHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCch-------HHHHHHHHHHHHHHHHhhhccCChHHH
Q 009469 229 AILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKP-------VLGFGVIWWSVATVLTPVAARIGLPFL 300 (534)
Q Consensus 229 ~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~-------~l~~g~~~~~i~~~l~~~~~~~~~~~l 300 (534)
..|. +.+++|++..+.+++.+++.++..++.+++|+++||+|||+ ++.+..++.++..++.+... +.+..
T Consensus 274 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~--~~~~~ 351 (476)
T PLN00028 274 IIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN--SLGAA 351 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc--hHHHH
Confidence 3444 46778999999999999999999999999999999998652 22233333333333333343 44445
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALW 380 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~ 380 (534)
++..++.+++.+...+...+++.+.. ++++|.+.|+...+..+|+.++|.+.+ .....+|+..|++.+++.++..++.
T Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 352 IVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 55555666655555555556666665 578999999998877788877776654 2233469999998887777666555
Q ss_pred HHh
Q 009469 381 LKK 383 (534)
Q Consensus 381 ~~~ 383 (534)
++.
T Consensus 430 ~~~ 432 (476)
T PLN00028 430 AFI 432 (476)
T ss_pred Hhe
Confidence 544
No 187
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.05 E-value=5.5e-09 Score=108.88 Aligned_cols=149 Identities=17% Similarity=0.175 Sum_probs=113.6
Q ss_pred HhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-hhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH
Q 009469 228 IAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-KFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (534)
Q Consensus 228 ~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l 306 (534)
...|.+.++.+.++.+++++.++..++..++..+.+++.| |++.++.+..+.++.+++.++.++.+ +++.+++..++
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--NLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHH
Confidence 4566666665557788999988887777666666666665 46667777788888888877777776 56666677788
Q ss_pred HhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc---Cc-hHHHHHHHHHHHHHHH
Q 009469 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF---GW-PSVFYSFGSLGSIWFA 378 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~---gw-~~~f~i~~~~~~i~~i 378 (534)
.|++.+...+...+++.+..|+++||+++|+.+....+|..+||.++|++.+.. ++ ...+++.+++.++..+
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999999999998864 33 3444444444444433
No 188
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.04 E-value=6.9e-09 Score=104.31 Aligned_cols=151 Identities=21% Similarity=0.224 Sum_probs=126.3
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l 306 (534)
.....+-..++|++..++.++.....+..+++++++|+|.||+|.|+++.++.+++.+.++..-+.. .-..++++.++
T Consensus 273 ~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~gll 350 (438)
T COG2270 273 AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--GELDFWILGLL 350 (438)
T ss_pred HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--ccHHHHHHHHH
Confidence 3333344569999999999999999999999999999999999999999999999888877666655 44557778889
Q ss_pred HhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHHHHHHHHHHHHHHH
Q 009469 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i~~~~~~i~~i~ 379 (534)
.|+..|..++..-++.++..|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+....++.++.+++
T Consensus 351 ~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 351 VGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred HHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 9999999999999999999999999999999999999999999999999988765 455555555444444433
No 189
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.03 E-value=1e-08 Score=106.97 Aligned_cols=188 Identities=15% Similarity=0.060 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVA 285 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~ 285 (534)
+...+.+.+......-+.+.+..+...+-++-|++..+.-++.....+...+..+++.++.||+|||+.++++..+..+.
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 33334444444444445555566666788888999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhhcc---CC--hH--HHHHHHHHHhhccc-chhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 286 TVLTPVAAR---IG--LP--FLLIMRAFMGIGEG-VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (534)
Q Consensus 286 ~~l~~~~~~---~~--~~--~ll~~r~l~Gig~g-~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~ 357 (534)
.+++..... .. +. ..+++.++..++.+ +.-|...-+.+|.+|++.|..++++......++..+-......+.
T Consensus 349 ~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 349 LLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776654421 11 11 12333333333333 234778889999999999999999999988888888888777777
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhh
Q 009469 358 QKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 394 (534)
Q Consensus 358 ~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~ 394 (534)
+.+|- +.|+++.+.+++..+..++..|+++.+....
T Consensus 429 ~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~e 464 (485)
T KOG0569|consen 429 NVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYE 464 (485)
T ss_pred HHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHH
Confidence 77776 7888888888888888888888877655443
No 190
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=1.3e-08 Score=104.21 Aligned_cols=136 Identities=13% Similarity=0.063 Sum_probs=107.9
Q ss_pred hhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-CCchHHHHHHHHHHHHHHHHhhhccCChHHHH
Q 009469 223 RVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIWWSVATVLTPVAARIGLPFLL 301 (534)
Q Consensus 223 ~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll 301 (534)
........|.+.++.|.+..+.+++.++..++..++.++.|++.||+ +||+.+.++.++.+++.+++.+... ....
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 289 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM--HGLW- 289 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh--hHHH-
Confidence 33444566777677899999999999999999999999999999999 5666777887888777776666552 2222
Q ss_pred HHHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 302 IMRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 302 ~~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
...++.|++.+..++...+.+.+..+ +++++..+++.+....+|..++|.+.|++.++.|
T Consensus 290 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 290 AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 24567899999888888777776654 4567899999999899999999999999998775
No 191
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=5.5e-09 Score=111.13 Aligned_cols=173 Identities=17% Similarity=0.185 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC--CchHHHHHHHHHHHHHH
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG--GKPVLGFGVIWWSVATV 287 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G--rr~~l~~g~~~~~i~~~ 287 (534)
+...+...+..+...+....+|.+.+..+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..++.++.+++.+
T Consensus 301 l~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~ 380 (509)
T KOG2504|consen 301 LLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARL 380 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHH
Confidence 3334444555566667777888899999999999999999999999999999999999988 44566777888888888
Q ss_pred HHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHH
Q 009469 288 LTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVF 366 (534)
Q Consensus 288 l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f 366 (534)
.+++++ +++.++..-++.|+..|........++.|+.+.++-..+.|+.....+++.++||+++|.+.+..| |...|
T Consensus 381 ~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f 458 (509)
T KOG2504|consen 381 FLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAF 458 (509)
T ss_pred HHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeeh
Confidence 888888 889999999999999999888888899999999999999999999999999999999999999887 99999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 009469 367 YSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 367 ~i~~~~~~i~~i~~~~~~ 384 (534)
+..++..++...+++...
T Consensus 459 ~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 459 YFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcChHHHHHHHHHHHhH
Confidence 998888877776655544
No 192
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.00 E-value=5.5e-09 Score=104.96 Aligned_cols=173 Identities=15% Similarity=0.076 Sum_probs=130.6
Q ss_pred HHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh
Q 009469 213 FSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV 291 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~ 291 (534)
++.++......-.++..+|. +.++|+.++.+.|.+...+.+...+..+.+|+++||+|.++++.+....++++..+..+
T Consensus 224 sllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~ 303 (417)
T COG2223 224 SLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSL 303 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHc
Confidence 33344444444455555565 58889999999999999999999999999999999999999999888888888877776
Q ss_pred hcc-----CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHH
Q 009469 292 AAR-----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSV 365 (534)
Q Consensus 292 ~~~-----~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~ 365 (534)
... .+...++..-+..++..|........++..++ +++-|.+.|+..+..++|+..-|...+...+..| +...
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~ 382 (417)
T COG2223 304 FLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGA 382 (417)
T ss_pred cccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHH
Confidence 541 12333333333334444444445567778888 5588999999999999999999999999988887 8888
Q ss_pred HHHHHHHHHHHHHHHHHhhcC
Q 009469 366 FYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 366 f~i~~~~~~i~~i~~~~~~~~ 386 (534)
|+++..+.+++.++.+....+
T Consensus 383 f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 383 FMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999888888877766554433
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.00 E-value=9.1e-09 Score=121.55 Aligned_cols=148 Identities=13% Similarity=0.069 Sum_probs=117.4
Q ss_pred HhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh--------------
Q 009469 228 IAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA-------------- 292 (534)
Q Consensus 228 ~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~-------------- 292 (534)
...|. +.+.+|.++.+.|++.+.+.++.+++.++.|+++|+.++++.+.++.++.+++.+.+++.
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 34455 456689999999999999999999999999999998887777666666655555444432
Q ss_pred ----ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchHHHH
Q 009469 293 ----ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFY 367 (534)
Q Consensus 293 ----~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-~~gw~~~f~ 367 (534)
...+.+.+++..++.|++.+...+...+++.+.+|++.||+++|+.+....+|..+++++++.+.. ..++.+.++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~ 405 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIIL 405 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 002566677888899999999999999999999999999999999999999999999999999874 456666666
Q ss_pred HHHHHHHH
Q 009469 368 SFGSLGSI 375 (534)
Q Consensus 368 i~~~~~~i 375 (534)
+.+++.++
T Consensus 406 ~~~~~~~~ 413 (1140)
T PRK06814 406 FIALANLI 413 (1140)
T ss_pred HHHHHHHH
Confidence 55554433
No 194
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.00 E-value=1.5e-08 Score=95.99 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=109.1
Q ss_pred HHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHH-HHHHHhhhccCChHHHHHHHHHHh
Q 009469 230 ILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSV-ATVLTPVAARIGLPFLLIMRAFMG 308 (534)
Q Consensus 230 ~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i-~~~l~~~~~~~~~~~ll~~r~l~G 308 (534)
...+++.||+|+...+.+.+......++.+++.|.++||+|++...+.+..+..+ +-.+..+.. +.=++...++|
T Consensus 288 ~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~----lsPy~~m~~lG 363 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF----LSPYTSMTFLG 363 (459)
T ss_pred HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh----ccHHHHHHHHh
Confidence 3447899999999999999988888999999999999999999877666554443 434444432 22345667788
Q ss_pred hcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC---chHHHHHHHHH
Q 009469 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG---WPSVFYSFGSL 372 (534)
Q Consensus 309 ig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g---w~~~f~i~~~~ 372 (534)
+..+.........++...|+++.|++.|..+...++|-.+.|++++++.++-| |--+|.+....
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 88877777778889999999999999999999999999999999999998754 44455443333
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.00 E-value=7e-09 Score=110.64 Aligned_cols=134 Identities=13% Similarity=0.194 Sum_probs=113.5
Q ss_pred HHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh--hccCChHHHHH
Q 009469 226 MSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV--AARIGLPFLLI 302 (534)
Q Consensus 226 ~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~--~~~~~~~~ll~ 302 (534)
.....|.+ .+.+|.++.+.+++.....++..++.++.|++.||+|||+++.++.++.+++.++..+ .+..+++.++.
T Consensus 274 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (485)
T TIGR00711 274 SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIAL 353 (485)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 33455554 4568999999999999999999999999999999999999999999888888877663 23334666777
Q ss_pred HHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 303 MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (534)
Q Consensus 303 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~ 359 (534)
..++.|++.+...++......+..|+++|+.+.|+.+....+|+.+|+.+.+.+.++
T Consensus 354 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 354 PQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999888888888888889999999999999999999999999999988764
No 196
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.98 E-value=3.1e-08 Score=103.00 Aligned_cols=146 Identities=17% Similarity=0.086 Sum_probs=113.4
Q ss_pred HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcc
Q 009469 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE 311 (534)
Q Consensus 232 ~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~ 311 (534)
.+.+.+|.++.+.|++.+...++..+++++.+++.||.++|+++..+.+ .++..++.++.+ +++..++..++.|++.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--SLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--HHHHHHHHHHHHHHhh
Confidence 3566789999999999999999999999999999999999988877753 344444445544 5666677778889998
Q ss_pred cchhhHHHHHHhhhccCCc-chhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 312 GVAMPAMNNMLSKWIPVSE-RSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 312 g~~~~~~~~~i~~~~~~~~-rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
+...++..+.+.+..|++. +|++.++.+....+|..++..+.+.+ ..+|-+..+++.++..++.+.+..
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 8888888888888765554 79999999999999999999998865 567777766665544444444433
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.98 E-value=1.3e-08 Score=107.68 Aligned_cols=137 Identities=16% Similarity=0.145 Sum_probs=107.6
Q ss_pred HHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHH
Q 009469 226 MSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMR 304 (534)
Q Consensus 226 ~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r 304 (534)
.....+++ .+.+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+..+++.+++..
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 326 (448)
T PRK09848 247 VSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL 326 (448)
T ss_pred HhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 33344544 44567665555555555567788899999999999999999999999888888777665433566677778
Q ss_pred HHHhhcccchhhHHHHHHhhhccCC-------cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 305 AFMGIGEGVAMPAMNNMLSKWIPVS-------ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 305 ~l~Gig~g~~~~~~~~~i~~~~~~~-------~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
++.|+|.+...+...++++|..|.+ ++|..+|+.+....+|..+|+.+.+.+.+..|+
T Consensus 327 ~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 327 AIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999999999999988654 358999999999999999999999998876654
No 198
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.98 E-value=2.8e-08 Score=103.95 Aligned_cols=169 Identities=14% Similarity=0.052 Sum_probs=114.5
Q ss_pred HHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh-hc--
Q 009469 217 LLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV-AA-- 293 (534)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~-~~-- 293 (534)
++.+.....++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.++..++.+.... .+
T Consensus 262 ~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 262 LATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33434444445555555433 223333333344556778888999999999999999999888877776643222 22
Q ss_pred -cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccC---------------------CcchhHHHHHHHHHHHHHHHHHH
Q 009469 294 -RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV---------------------SERSRSLAFVYSGMYLGSVTGLA 351 (534)
Q Consensus 294 -~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~---------------------~~rg~~~gi~~~~~~lG~~igp~ 351 (534)
..+++.+.+..+...++.|........++.+++|+ ++-|.+.|+..+...+|+.+-|.
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 12355555555555556666666777888888864 15678899999999999999998
Q ss_pred HHHHhhcccC-chHHHHHHHHHHHHHHHHHHHhhcC
Q 009469 352 VSPILIQKFG-WPSVFYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 352 i~~~l~~~~g-w~~~f~i~~~~~~i~~i~~~~~~~~ 386 (534)
+.+...+..| +...|+++.+..+++.++.+....+
T Consensus 421 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 421 AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8888777654 7788888888888887776665443
No 199
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.97 E-value=1.9e-08 Score=103.65 Aligned_cols=138 Identities=17% Similarity=0.271 Sum_probs=102.6
Q ss_pred HHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc---cCChHHHHH
Q 009469 227 SIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA---RIGLPFLLI 302 (534)
Q Consensus 227 ~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~---~~~~~~ll~ 302 (534)
....|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+.++..++.+++.+.. ..++..+++
T Consensus 226 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIG 305 (385)
T ss_pred HHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 334454 4567899999999999999999999999999999999999999888887777766655432 113445556
Q ss_pred HHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHH-HHHHHHHHHHHhhcccCchHHH
Q 009469 303 MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQKFGWPSVF 366 (534)
Q Consensus 303 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~l-G~~igp~i~~~l~~~~gw~~~f 366 (534)
..++.|++.+...+.......|..| ++++++.++.+..... |.+.++. .+.+.+..+|...+
T Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 306 PMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHH
Confidence 6778889888888888888888885 6899999998876655 5555555 44554444444333
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=98.97 E-value=2.8e-08 Score=104.85 Aligned_cols=141 Identities=11% Similarity=0.083 Sum_probs=113.2
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccc
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~ 313 (534)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.+ +. ..+..-++.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GH-VGLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--Ch-HHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999888888777666655554 33 234556788999999
Q ss_pred hhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC-chHHHHHHHHHHHHHHHH
Q 009469 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG-WPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g-w~~~f~i~~~~~~i~~i~ 379 (534)
.+|...+...+.+|+ +.+.+.++... ..+|+.++|.+.|.+.+..| -+..|++..+..+.....
T Consensus 364 i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 364 QYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 999999999999854 56777887764 44788899999999999887 788887655555444443
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.94 E-value=3.8e-08 Score=102.08 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=93.0
Q ss_pred HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhccc
Q 009469 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 312 (534)
Q Consensus 233 ~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g 312 (534)
+.+++|.++.+.+++.+...++..++.++.+++.||+|+|+++.++.++..++.++..+.+ +.+..+..-++.++|.+
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP--SHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999998888887777765 33333333344444433
Q ss_pred chhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHH
Q 009469 313 VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 373 (534)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~ 373 (534)
...+. ....+..|.++|+ +...+...++..+|+.+++++.+..|+.....+.+.+.
T Consensus 308 ~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 308 VGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 33332 2334444544443 44445556777778888888887778776555544433
No 202
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.93 E-value=4e-08 Score=104.78 Aligned_cols=143 Identities=11% Similarity=-0.004 Sum_probs=107.6
Q ss_pred HhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhh---hccCC
Q 009469 220 NMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPV---AARIG 296 (534)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~---~~~~~ 296 (534)
...........+++.++...+....+++.++..++.+++.+++++++||+|+|+.+.++.++.+++.+...+ ....+
T Consensus 244 ~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (473)
T PRK10429 244 NIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHN 323 (473)
T ss_pred HHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchh
Confidence 344444455555555554445666777777777888999999999999999999999888876666555432 22224
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhcc-------CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~-------~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
.+.+++.-++.|++.+...+...++++|..+ .++.|..+|......-+|..+++.+.|++.+..|+
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6667777788899999999999999999965 33346688999999999999999999998876654
No 203
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.92 E-value=1.7e-08 Score=107.30 Aligned_cols=171 Identities=12% Similarity=0.047 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhhhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHH--------HHHHHH
Q 009469 211 LCFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVL--------GFGVIW 281 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l--------~~g~~~ 281 (534)
...+..+......+.+...+|.+ .+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 344 (465)
T TIGR00894 265 AIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGG 344 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 33344444444445555566654 567899999999999999999999999999999998754321 111111
Q ss_pred HHHHHHH--HhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 282 WSVATVL--TPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK 359 (534)
Q Consensus 282 ~~i~~~l--~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~ 359 (534)
...+.++ ..... .+....+++-.+.+.+.+...+.......+..| +.+|.++++.+....+|+.++|.+.+.+.+.
T Consensus 345 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 345 LGPGIFAYALPYLS-AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHHHHHHcC-CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 1111111 11111 133333444445555555455555555567774 5899999999999999999999999998765
Q ss_pred c---CchHHHHHHHHHHHHHHHHHHHh
Q 009469 360 F---GWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 360 ~---gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
. +|...|++.+++.++..++....
T Consensus 423 ~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 423 DSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 3 37888888877776665555443
No 204
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.92 E-value=2.4e-08 Score=107.15 Aligned_cols=133 Identities=13% Similarity=0.121 Sum_probs=112.7
Q ss_pred HHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc-cCChHHHHHH
Q 009469 226 MSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-RIGLPFLLIM 303 (534)
Q Consensus 226 ~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~-~~~~~~ll~~ 303 (534)
.....|. ++..+|.++.+.|+....+.++..++.++.|++.||+|+|+++..+.++.+++.+++.+.. ..+.+..++.
T Consensus 278 ~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 357 (495)
T PRK14995 278 FELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGL 357 (495)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 3344454 4566899999999999999999999999999999999999999999888887776655432 2245556677
Q ss_pred HHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 304 RAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 304 r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
.++.|+|.+...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.+
T Consensus 358 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 358 MALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999888889999999999999999999999999999999999998865
No 205
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.92 E-value=7e-08 Score=99.30 Aligned_cols=158 Identities=11% Similarity=0.008 Sum_probs=105.2
Q ss_pred HHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCC---chHHH-HHHHHHHHHHHHHhh
Q 009469 216 FLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG---KPVLG-FGVIWWSVATVLTPV 291 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr---r~~l~-~g~~~~~i~~~l~~~ 291 (534)
.++.....+.+...+|.+.++.|.+.. .+...++..+...++ .++++||..| |+... ...++.++..++.++
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~ 276 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF 276 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555667777677777754 555555555544444 4677777654 33333 234444444444444
Q ss_pred hccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHH
Q 009469 292 AARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGS 371 (534)
Q Consensus 292 ~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~ 371 (534)
.. +....++.-.+.|++....++...++.+|.+|++.|++++|+.+....+|++++|++.+.+.. |....|.+.++
T Consensus 277 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~ 352 (368)
T TIGR00903 277 EL--NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAI 352 (368)
T ss_pred cc--ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 44 333344555666777777777788999999999999999999999999999999999988773 66778888777
Q ss_pred HHHHHHHHHH
Q 009469 372 LGSIWFALWL 381 (534)
Q Consensus 372 ~~~i~~i~~~ 381 (534)
..++..+..+
T Consensus 353 ~~~i~~~~~~ 362 (368)
T TIGR00903 353 LITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHH
Confidence 7766655543
No 206
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.90 E-value=7.2e-09 Score=106.48 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=135.6
Q ss_pred HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhccc
Q 009469 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEG 312 (534)
Q Consensus 233 ~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g 312 (534)
-.++.+..+...|.+......+-++.-++.+++.+|+|+-+++.+++.+.++=.+..+... |+|+.+..-+++|+..+
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n~W~vLPieilqgit~a 474 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--NPWMVLPIEILQGITHA 474 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--CchheeeHHHHHHHHHH
Confidence 3677887888889888888899999999999999999999999999999999888888888 89999999999999999
Q ss_pred chhhHHHHHHhhhccCCcchhHHHHHHH-HHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhh
Q 009469 313 VAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~rg~~~gi~~~-~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
..|.++.+|+++..||+-|..+.+++.. ..++|-.+|.+|+|.+..++|-+..|++.++.+++.+++.....
T Consensus 475 liWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 475 LIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999776 67789999999999999999999999999988887777665443
No 207
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=9.1e-09 Score=100.97 Aligned_cols=132 Identities=12% Similarity=0.137 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHH--HHHHHHHHhhcccchhhHHHHHHhhhcc
Q 009469 250 SFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPF--LLIMRAFMGIGEGVAMPAMNNMLSKWIP 327 (534)
Q Consensus 250 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~--ll~~r~l~Gig~g~~~~~~~~~i~~~~~ 327 (534)
+..+.-..|.++.+++.||+|||+.|..+.+++++..++...+...|... +.++|++. ++.+.+++.|..|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccc
Confidence 33456667889999999999999999999999999998888776544422 33445444 4455667889999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCC
Q 009469 328 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSS 387 (534)
Q Consensus 328 ~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~ 387 (534)
.+-|+.+.|....+..+|+++.|+++ ...+ ..-..+..+.+.++++..+...+++.++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999999998 3322 2333445556666666666665555443
No 208
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.88 E-value=7.3e-06 Score=86.05 Aligned_cols=279 Identities=8% Similarity=0.028 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCC-----CcchhHHHHHHHHHHHHHH-HHHHHHHHhhhCCchHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNW-----NSTTVGLIQSSFFWGYLLT-QIVGGIWADKFGGKPVLGFGV 279 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~g~i~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~g~ 279 (534)
+..++...+..|+..+.++. +-++.+.+.+ +...+.++.+...+...+. .++.+++++|++|++++.+..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 34444445555554444443 3345555554 3457888888887777666 889999999999999987777
Q ss_pred HHHHHHHHHHhhhc----cC-------------------------ChHHHHHHHHHHhhcccchhh-HHHHHHhhhccCC
Q 009469 280 IWWSVATVLTPVAA----RI-------------------------GLPFLLIMRAFMGIGEGVAMP-AMNNMLSKWIPVS 329 (534)
Q Consensus 280 ~~~~i~~~l~~~~~----~~-------------------------~~~~ll~~r~l~Gig~g~~~~-~~~~~i~~~~~~~ 329 (534)
..+.+..+++++.- +. +.|..-+.-+...+-...... .-.++.+|.++.+
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~ 161 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID 161 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 66666666655441 00 122222333344444444554 7788999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------c-Cch----HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHH
Q 009469 330 ERSRSLAFVYSGMYLGSVTGLAVSPILIQK-------F-GWP----SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAE 397 (534)
Q Consensus 330 ~rg~~~gi~~~~~~lG~~igp~i~~~l~~~-------~-gw~----~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 397 (534)
+-.+-++++..+.++|.++++.+..++.+. . .|. +.+.+.++...+...+.....+.. ..++.....
T Consensus 162 qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 240 (472)
T TIGR00769 162 EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV-LTDPRSYNP 240 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCccccch
Confidence 999999999999999999999998887631 1 232 223333333333333333322222 111110000
Q ss_pred HHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhh----hHHHHHHHHHHH
Q 009469 398 EKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTE----SGLFCVLPWLTM 473 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~----~g~l~~~~~~~~ 473 (534)
++ .......+......++.++++|.++.+++...++......+....-..+.+.+- ++.+ .|.+....++..
T Consensus 241 ~~---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~t 316 (472)
T TIGR00769 241 AL---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVS 316 (472)
T ss_pred hh---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHH
Confidence 00 000111111223467788999988888888888877776666655555665443 3322 233444445556
Q ss_pred HHHHHHHHHHHHHhhcccch
Q 009469 474 AVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 474 iig~~i~g~l~dr~g~r~~~ 493 (534)
++..++.+++.+|+|-+...
T Consensus 317 l~~~l~~~~l~~~~Gw~~~a 336 (472)
T TIGR00769 317 VTMMLLSGNVIRKYGWLTAA 336 (472)
T ss_pred HHHHHHHHHHHHHhhHHHHH
Confidence 66666778999999877543
No 209
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.87 E-value=1.4e-08 Score=102.94 Aligned_cols=129 Identities=17% Similarity=0.280 Sum_probs=108.1
Q ss_pred hhhHHHHhHHHH-HhhhCCC-cchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccC-ChH
Q 009469 222 DRVNMSIAILPM-SKEFNWN-STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI-GLP 298 (534)
Q Consensus 222 ~~~~~~~~~~~~-~~~~g~s-~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~-~~~ 298 (534)
.........|.+ .+++|.+ ..+.+++.++..++..++.++.|++.||+|+|+.+.+......+..+...+.... +..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 344456666665 8889999 7899999999999999999999999999999888877777777766666554321 345
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHH
Q 009469 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGL 350 (534)
Q Consensus 299 ~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp 350 (534)
..++..++.|++.+...+...+++.+.+|+++||++.|+.+...++|..+||
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5666788899999999999999999999999999999999999999999987
No 210
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.86 E-value=4.6e-08 Score=100.04 Aligned_cols=123 Identities=14% Similarity=0.091 Sum_probs=97.7
Q ss_pred hhhhHHHHhHHHHHhhhCCCcchhHHHHHHHH-HHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh-cc----
Q 009469 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFF-WGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA-AR---- 294 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~-l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~-~~---- 294 (534)
...+......|.+.+++|.+..+++.+.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+. .+
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 33334445566665669999999998887665 6778999999999999999999988888877776655443 11
Q ss_pred ----CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHH
Q 009469 295 ----IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMY 343 (534)
Q Consensus 295 ----~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~ 343 (534)
.+.+.++.+.++.+++.+...+...+++.+.+|+++||+.+|++++..+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1456677788888999999999999999999999999999999887654
No 211
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.86 E-value=1e-07 Score=100.17 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=120.4
Q ss_pred HHHHHHhhhhHHHHhHHHHHhh-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 215 AFLLCNMDRVNMSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
..++............+++.++ ++.+ ...+++..+..++..++.+++++++||+|+|+++..+.++.+++.++..+..
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 3344444555555556666555 4544 6778888899999999999999999999999999999999999998888775
Q ss_pred cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccC-------CcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV-------SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 294 ~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~-------~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
..+.+.+++..++.|++.+..++...++++|..+. ++.|..+|+......+|..+++.+.+.+.+..|+
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 34788899999999999999999999999999863 3458889999999999999999999988776554
No 212
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=2.3e-06 Score=83.71 Aligned_cols=155 Identities=30% Similarity=0.572 Sum_probs=124.7
Q ss_pred hhhhHHHHhHHHHHhhhCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChH
Q 009469 221 MDRVNMSIAILPMSKEFNWNS--TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLP 298 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~--~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~ 298 (534)
..........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.+++++....+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 555566667777777777666 488999999999999999999999999999988888887656666666666522378
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHhhhccC-CcchhHHHHHHH-HHHHHHHHHHHHHHHhhcc--cCchHHHHHHHHHHH
Q 009469 299 FLLIMRAFMGIGEGVAMPAMNNMLSKWIPV-SERSRSLAFVYS-GMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLGS 374 (534)
Q Consensus 299 ~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~-~~rg~~~gi~~~-~~~lG~~igp~i~~~l~~~--~gw~~~f~i~~~~~~ 374 (534)
.+++.|++.|++.+...+...+++.+++|+ ++|+...+.... ...+|..++|.+++.+... .+|++.|.+......
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 899999999999999999999999999977 688999998888 5888889999888777654 578886666555544
Q ss_pred H
Q 009469 375 I 375 (534)
Q Consensus 375 i 375 (534)
.
T Consensus 176 ~ 176 (338)
T COG0477 176 L 176 (338)
T ss_pred H
Confidence 3
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=98.84 E-value=2.1e-07 Score=98.42 Aligned_cols=134 Identities=11% Similarity=0.097 Sum_probs=99.3
Q ss_pred hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHh
Q 009469 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMG 308 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~G 308 (534)
..+++.++.--.+...+.+.....+...++.+++++++||+|+|+.+.++.++.++..+...+.+..+.+.+++..++.|
T Consensus 251 ~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 330 (444)
T PRK09669 251 ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFN 330 (444)
T ss_pred hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 33444333322334445566667788888899999999999999999888876665444333332225666778888999
Q ss_pred hcccchhhHHHHHHhhhccC-------CcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 309 IGEGVAMPAMNNMLSKWIPV-------SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 309 ig~g~~~~~~~~~i~~~~~~-------~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
++.+...+...++++|..+. +..|..+|+......+|..+|+.+++.+.+..|+
T Consensus 331 ~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998852 2346678888889999999999999999887765
No 214
>PRK11043 putative transporter; Provisional
Probab=98.83 E-value=3.1e-07 Score=95.59 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=102.2
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHH---hhhccCChHHHHHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLT---PVAARIGLPFLLIM 303 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~---~~~~~~~~~~ll~~ 303 (534)
....|.+.+++|.+..+.++....+.++..++.++.+++.||+|+|+.+....++.+++.+.+ ......+++.+++.
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 344566677789999999998888889999999999999999999987665555444443322 22111245555566
Q ss_pred HHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 304 RAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 304 r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
..+.|++.+..++...+...+..| +++|+++|+++.....++.+++.+.+.+.+.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhH
Confidence 677788888888888888777774 68999999999988888889999999887754333
No 215
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.82 E-value=2.8e-07 Score=98.22 Aligned_cols=176 Identities=14% Similarity=0.115 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHH-hhhCCCc----chhHHHHHHHHHHHHHHHHHHHHHHhhhCC-----chHH--HH
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMS-KEFNWNS----TTVGLIQSSFFWGYLLTQIVGGIWADKFGG-----KPVL--GF 277 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~----~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-----r~~l--~~ 277 (534)
+..++..++.+.........++.+. ++.+.+. ...+++.++..+...+.+++..++..+.+| +... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 3333334444444444444445443 3334332 226788999988888888886654444443 3333 77
Q ss_pred HHHHHHHHHHHHhhh-------ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHH
Q 009469 278 GVIWWSVATVLTPVA-------ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGL 350 (534)
Q Consensus 278 g~~~~~i~~~l~~~~-------~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp 350 (534)
|.++.+++.+..++. ...+++.++...++.|+|.....|...+++.+..|++.||+++|++.....+|..+++
T Consensus 355 G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~ 434 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGG 434 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887776642 0137888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhc
Q 009469 351 AVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 351 ~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
.+........+|.+.|...+++.++..++.+...+
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 435 YLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99988877778888888888777776666655433
No 216
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.79 E-value=2.5e-07 Score=95.22 Aligned_cols=123 Identities=11% Similarity=0.077 Sum_probs=86.8
Q ss_pred HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh--ccCChHHHHHHHHHHhh
Q 009469 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA--ARIGLPFLLIMRAFMGI 309 (534)
Q Consensus 232 ~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~--~~~~~~~ll~~r~l~Gi 309 (534)
.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+++.++.++..+..+..... ...+.+.++++-.+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3566789999999999999999999999999999999999999888877654433222211 11134444444444444
Q ss_pred cccchhhHHHHHHhhhccCCcchhHHHHHHHH-HHHHHHHHHHHHHH
Q 009469 310 GEGVAMPAMNNMLSKWIPVSERSRSLAFVYSG-MYLGSVTGLAVSPI 355 (534)
Q Consensus 310 g~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~-~~lG~~igp~i~~~ 355 (534)
+.+.........+.|..| ++++.+.++.... ..+|..+++++++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445555566677777775 7899999987653 45777777776553
No 217
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.79 E-value=3.6e-06 Score=87.31 Aligned_cols=284 Identities=9% Similarity=0.005 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHhhhC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH----H
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFN-WNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS----V 284 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~----i 284 (534)
..+....++...+.-++....+.+..+.. -+---.+...-.-.+..+++++..|.+.||..|.+++..+.++-- +
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHH
Confidence 34455666777777778888777666553 244444555555667777888999999999999988666544322 2
Q ss_pred HHHHHh--hhccC-----Ch--HHHHHHHHHHhhcccc-hhhHHHHHHhhhc------cCCcchhHHHHHHHHHHHHHHH
Q 009469 285 ATVLTP--VAARI-----GL--PFLLIMRAFMGIGEGV-AMPAMNNMLSKWI------PVSERSRSLAFVYSGMYLGSVT 348 (534)
Q Consensus 285 ~~~l~~--~~~~~-----~~--~~ll~~r~l~Gig~g~-~~~~~~~~i~~~~------~~~~rg~~~gi~~~~~~lG~~i 348 (534)
++.+.. +.... +. ..+++.-.+.|.-.-. ......++--||. ++..+.+..+.+.-.=-+.-++
T Consensus 85 s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckll 164 (432)
T PF06963_consen 85 SCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLL 164 (432)
T ss_pred HHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHH
Confidence 222211 11110 11 1112222222221111 1122223333443 2344556666666667788999
Q ss_pred HHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhc---C-CC---CCChhhhHHHHhhhhC-CCccc-----------
Q 009469 349 GLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY---S-SP---KEDPELRAEEKRHILG-GSISK----------- 409 (534)
Q Consensus 349 gp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~---~-~~---~~~~~~~~~~~~~~~~-~~~~~----------- 409 (534)
+|++.|.+.+..+.....++.++..++..++=++... + .| .+++....+....... .....
T Consensus 165 aPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (432)
T PF06963_consen 165 APLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNP 244 (432)
T ss_pred HHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHH
Confidence 9999999999888888887777777666554332211 1 11 1111000000000000 00000
Q ss_pred cccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 410 EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS 489 (534)
Q Consensus 410 ~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~ 489 (534)
-......|+..++.+.+ ...++..+.++...++......|+... |+++...|.+-....+.++.+.++..++.+|+|.
T Consensus 245 ~~~~~~~w~~Y~~q~vf-las~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl 322 (432)
T PF06963_consen 245 LRTIIRGWRTYFRQPVF-LASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL 322 (432)
T ss_pred HHHHhccHHHHHhCHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00112346666666544 444444444555666677888899885 9999999999999999999999999999999997
Q ss_pred ccchHH
Q 009469 490 KGLSIT 495 (534)
Q Consensus 490 r~~~i~ 495 (534)
.+.-..
T Consensus 323 vr~G~~ 328 (432)
T PF06963_consen 323 VRAGLW 328 (432)
T ss_pred hhhHHH
Confidence 775443
No 218
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.78 E-value=5.7e-07 Score=91.21 Aligned_cols=283 Identities=13% Similarity=0.069 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hCCchH-HHHHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGKPV-LGFGVIW 281 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr----~Grr~~-l~~g~~~ 281 (534)
+.++......+..-+.+..-..+.+++.+++|++....+.+.....+...+.+|+.|..+|| |||||. +..+.+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 33444444445555566666677888899999999999999998899999999999999996 787765 4566666
Q ss_pred HHHHHHHHhhhccC---------------ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchh-HHHHHHHHHHHH
Q 009469 282 WSVATVLTPVAARI---------------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSR-SLAFVYSGMYLG 345 (534)
Q Consensus 282 ~~i~~~l~~~~~~~---------------~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~-~~gi~~~~~~lG 345 (534)
.+++.++..++... ....++++.-+.-++.-..+.++-+++.|....+++.+ +++++..+.++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 77777777766421 01234444555556666788899999999998777777 999999999999
Q ss_pred HHHHHHHHHHhhcccCchH--HHHHHHHHHHHHHHH------HHHh-hcCC------CCCChhhhH-HHHhhhhCCCccc
Q 009469 346 SVTGLAVSPILIQKFGWPS--VFYSFGSLGSIWFAL------WLKK-AYSS------PKEDPELRA-EEKRHILGGSISK 409 (534)
Q Consensus 346 ~~igp~i~~~l~~~~gw~~--~f~i~~~~~~i~~i~------~~~~-~~~~------~~~~~~~~~-~~~~~~~~~~~~~ 409 (534)
+++|..+++++ +|+- .|.......+.+..+ ...+ ...+ +.+++...+ ...+...... ..
T Consensus 192 nvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~-~~ 266 (498)
T KOG0637|consen 192 NVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKL-PF 266 (498)
T ss_pred ceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCc-ch
Confidence 99998888743 3321 121111111111110 0000 0000 000000000 0000000000 00
Q ss_pred cccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChhh----------------hHHHHHHHHHH
Q 009469 410 EAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQ-VLKFNLTE----------------SGLFCVLPWLT 472 (534)
Q Consensus 410 ~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~-~~g~s~~~----------------~g~l~~~~~~~ 472 (534)
-......+ ...++..+.+++...+.+.+.+.+.-|...++-+ .++-++.. ..+=+.+..+.
T Consensus 267 ~~e~fG~~--~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~ 344 (498)
T KOG0637|consen 267 LLEIFGAL--KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIV 344 (498)
T ss_pred HHHHhchH--hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHH
Confidence 00000011 1235778999999999888888877777666643 34433221 12334556667
Q ss_pred HHHHHHHHHHHHHHhhcccchHHH
Q 009469 473 MAVFANMGGWIADTLVSKGLSITA 496 (534)
Q Consensus 473 ~iig~~i~g~l~dr~g~r~~~i~~ 496 (534)
..+.+....++.+|+|-|+....+
T Consensus 345 lgi~S~~~~~l~~~~g~r~~y~~~ 368 (498)
T KOG0637|consen 345 LGIYSLLVEKLSRKFGTRKRYWGG 368 (498)
T ss_pred HHHHHHHHHHHHHhcCcceEEeeh
Confidence 777788889999999955544433
No 219
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.72 E-value=1.5e-06 Score=85.93 Aligned_cols=175 Identities=14% Similarity=0.120 Sum_probs=134.8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-CCchHHHHHHHH
Q 009469 203 PKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIW 281 (534)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~g~~~ 281 (534)
+..|.+.+...+ ..+..+.+-..+|.+..|-|+|+.+.|++.+...+......+....+.+|. .+|+..+...++
T Consensus 208 ~~aW~vtLfmGl----qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 208 PLAWQVTLFMGL----QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred chhHHHHHHHHh----hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 344555443333 334445566678999999999999999999999999999999999999965 577888888888
Q ss_pred HHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCC-cchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 282 WSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS-ERSRSLAFVYSGMYLGSVTGLAVSPILIQKF 360 (534)
Q Consensus 282 ~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~-~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~ 360 (534)
+.++.+.+.+.+...+ ++ .-+++|+|.|..++.+..++.+..+.. +-+.-.|+.+...++=..+||.+.|++.|..
T Consensus 284 ~l~G~~G~~~~P~~~~--~l-w~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 284 MLVGLVGLLLAPGQLP--IL-WALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHhhhhHH--HH-HHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 8888888888773222 22 248999999999999999999988644 4456667777777788889999999999976
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHhh
Q 009469 361 -GWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 361 -gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
+|+...+..+...+++.+..+...
T Consensus 361 gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 361 GSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred CChHHHHHHHHHHHHHHHHHHhhcc
Confidence 488888877777766666655543
No 220
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.67 E-value=4.9e-08 Score=97.10 Aligned_cols=162 Identities=18% Similarity=0.134 Sum_probs=126.8
Q ss_pred HhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC--CchHHHHHHHHHHHHHHHHhhhccCC
Q 009469 220 NMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG--GKPVLGFGVIWWSVATVLTPVAARIG 296 (534)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G--rr~~l~~g~~~~~i~~~l~~~~~~~~ 296 (534)
.......-+.++. +.+.+..+..++|+.+--..+.+.++..+.|.++||++ |-.....+.+...+......+++ +
T Consensus 283 n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~--~ 360 (464)
T KOG3764|consen 283 NSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT--S 360 (464)
T ss_pred cchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh--h
Confidence 3444445555555 46777866679999999999999999999999999999 43334455555566666667777 7
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhccCC------cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS------ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 370 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~------~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~ 370 (534)
+..+++-++..|++.+...+.....+....+.+ -.|...++...++.+|..+||.++|.+.+.+|++|...+.+
T Consensus 361 ~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig 440 (464)
T KOG3764|consen 361 IAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIG 440 (464)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHH
Confidence 888999888888888877776666666666433 45788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 009469 371 SLGSIWFALWLKK 383 (534)
Q Consensus 371 ~~~~i~~i~~~~~ 383 (534)
+..++...+...+
T Consensus 441 ~~n~iyapvl~ll 453 (464)
T KOG3764|consen 441 ILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHH
Confidence 8888776665554
No 221
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.67 E-value=1e-06 Score=91.52 Aligned_cols=128 Identities=15% Similarity=0.051 Sum_probs=95.2
Q ss_pred HHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHH-HHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhc
Q 009469 232 PMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLG-FGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIG 310 (534)
Q Consensus 232 ~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig 310 (534)
.+.+.+|.++.+.+++.....++..++.++.+++.||++++.... .+.++..+...........+.+.+++..++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 344558999999999999999999999999999999998333222 1222222222222222212456677778889999
Q ss_pred ccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 311 EGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF 360 (534)
Q Consensus 311 ~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~ 360 (534)
.+...+...++..+.+| +++|.+.++.+....+|..+++.+++.+....
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 99889999999999885 68899999999999999999999999886653
No 222
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.64 E-value=1.2e-06 Score=91.58 Aligned_cols=143 Identities=10% Similarity=0.002 Sum_probs=104.2
Q ss_pred HHHhHHHHHhhh--CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHH
Q 009469 226 MSIAILPMSKEF--NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIM 303 (534)
Q Consensus 226 ~~~~~~~~~~~~--g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~ 303 (534)
....++.+.++. +.+....+...+.+..+..++.++++++.||+++|+++.++.++.++..++..+.+ +.. .+.+
T Consensus 251 ~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~--~~~-~~~~ 327 (410)
T TIGR00885 251 CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG--GHV-GLYC 327 (410)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--ChH-HHHH
Confidence 344455554444 33444445566777788899999999999999999999888888888888777766 433 3566
Q ss_pred HHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc------CchHHHHHHHHHH
Q 009469 304 RAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------GWPSVFYSFGSLG 373 (534)
Q Consensus 304 r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~------gw~~~f~i~~~~~ 373 (534)
-++.|++.+..+|...++..+..+++.+..+.++..+ .+|+.++|++.|++.|.. +.+..|++..+..
T Consensus 328 l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 328 LTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 6777888888999999999999965554334444333 399999999999999954 4677777644433
No 223
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.63 E-value=3.1e-07 Score=97.64 Aligned_cols=128 Identities=14% Similarity=0.145 Sum_probs=110.0
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc-c-------CChHHHHHHHH
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA-R-------IGLPFLLIMRA 305 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~-~-------~~~~~ll~~r~ 305 (534)
.+.+|.++.++|++.....++..++..+.+++.+|++.|+++.++.++.+++.+...... . .+.+.++...+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 356899999999999999999999999999999999999999999999988775543111 0 12334556677
Q ss_pred HHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 306 FMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 306 l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
+.+++.+..+.+...++.+..|++.+|+.++++.+..++|..+++.+++.+.+..|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888889999999999999999999999999999999999999999998776
No 224
>PRK11462 putative transporter; Provisional
Probab=98.59 E-value=4.7e-06 Score=88.48 Aligned_cols=136 Identities=12% Similarity=0.028 Sum_probs=90.2
Q ss_pred HHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH
Q 009469 227 SIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF 306 (534)
Q Consensus 227 ~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l 306 (534)
+....++.++..-++...+++...+.++.+++.+++++++||+|+|+++..+.++.++..++..+.+..+...+++.-++
T Consensus 248 ~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 327 (460)
T PRK11462 248 GGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFV 327 (460)
T ss_pred HhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 33344443433333445566777888888999999999999999999877655544443434333332223334445566
Q ss_pred HhhcccchhhHHHHHHhhhcc-------CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 307 MGIGEGVAMPAMNNMLSKWIP-------VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~-------~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
.|++.+...+...++++|..+ .++-|..++......-+|..+++.+++.+.+..|+
T Consensus 328 ~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 328 IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 787777766666777887765 22335556777788889999999999988876554
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.56 E-value=2.5e-06 Score=88.56 Aligned_cols=148 Identities=15% Similarity=0.101 Sum_probs=117.4
Q ss_pred HHHHHHhhhhHHHHhHHHHHh-hhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 215 AFLLCNMDRVNMSIAILPMSK-EFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
..++.....+..+....++.+ .+|.+.....+.......+..++.+++.++.+|+|+|+++.++.++++++.++..+.+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 344444555555666565543 3576777777788888888888899999999999999999999999999999998887
Q ss_pred cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccC-------CcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 294 RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV-------SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 294 ~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~-------~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
..+.+.+++..++.++|.+...+...++++|..+- +.-|...|......=+|..++..+.+++....|+
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55678888888999999999999999999988752 2236777787778888999998888888776553
No 226
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.55 E-value=1.5e-05 Score=82.85 Aligned_cols=233 Identities=13% Similarity=0.044 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhc
Q 009469 247 IQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI 326 (534)
Q Consensus 247 i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~ 326 (534)
..++.+..+.+.+++.+.+.|+.|.|+.++++...+....+.+.+. |-+.+++...+.|+|.+..+.....++++..
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~s 131 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNS 131 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcC
Confidence 3778888889999999999999999999999999999888776665 4566889999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC--------ch-HH----------HHHHHHHHHHHHHHHHHhhcCC
Q 009469 327 PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG--------WP-SV----------FYSFGSLGSIWFALWLKKAYSS 387 (534)
Q Consensus 327 ~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g--------w~-~~----------f~i~~~~~~i~~i~~~~~~~~~ 387 (534)
+++.+.+..++..+....+.++|..+...+...-+ -+ +. ..+.+++..+..+....... .
T Consensus 132 t~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~-~ 210 (461)
T KOG3098|consen 132 TRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF-L 210 (461)
T ss_pred ChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee-c
Confidence 99999999999999888888888766554433211 11 11 11111111111111111111 1
Q ss_pred CCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCC-hhhhHH
Q 009469 388 PKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQV--LKFN-LTESGL 464 (534)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~--~g~s-~~~~g~ 464 (534)
+.+......+.. + ..........-+++++++.+.+....+...+.........|..+.-. .+.+ ....++
T Consensus 211 p~~~~~~~~~~~-~------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai 283 (461)
T KOG3098|consen 211 PSKDVVNCKSSS-E------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAI 283 (461)
T ss_pred Cccchhhhhhhc-c------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHH
Confidence 111110000000 0 00000111233456777777777776666555544555555544332 2222 233455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 465 FCVLPWLTMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 465 l~~~~~~~~iig~~i~g~l~dr~g~r 490 (534)
.....+++.+++.+..+.+.+|.++.
T Consensus 284 ~~~~~g~g~v~~g~~~~~l~~rir~f 309 (461)
T KOG3098|consen 284 YSIGIGLGEVIGGLDFSILSKRIRGF 309 (461)
T ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhc
Confidence 55566677777778788887766443
No 227
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.52 E-value=6e-07 Score=91.89 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=87.2
Q ss_pred HHHhHHH-HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccC--ChHHHHH
Q 009469 226 MSIAILP-MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARI--GLPFLLI 302 (534)
Q Consensus 226 ~~~~~~~-~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~--~~~~ll~ 302 (534)
+....|. +.+.+|.++.+.+++.++..+...++.+++|+++||+|+|+.+..+.++.+.+.++..+.... +.+.+++
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (366)
T TIGR00886 244 VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIV 323 (366)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 3344444 456789999999999999999999999999999999999988887777766666555543321 3444444
Q ss_pred HHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHH
Q 009469 303 MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLG 345 (534)
Q Consensus 303 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG 345 (534)
..++.+++.+...+...+++++.+| +++|.++|+.+....+|
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 324 LFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 4455555555556667778888885 69999999988876654
No 228
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.49 E-value=2.5e-06 Score=91.56 Aligned_cols=139 Identities=13% Similarity=0.102 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh----hhCCchHHHHHHHHHHHHHHHHhhhcc-------CChHHHHHHHHHHhhccc
Q 009469 244 VGLIQSSFFWGYLLTQIVGGIWAD----KFGGKPVLGFGVIWWSVATVLTPVAAR-------IGLPFLLIMRAFMGIGEG 312 (534)
Q Consensus 244 ~g~i~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~~g~~~~~i~~~l~~~~~~-------~~~~~ll~~r~l~Gig~g 312 (534)
.+++.++..+...+..++.+++.+ |++..+.+.+|.++.+++.++.++... .+.+.++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 567777787777777777654444 445557788999999999888766642 124578889999999999
Q ss_pred chhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc----------ccCchHHHHHHHHHHHHHHHHHHH
Q 009469 313 VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ----------KFGWPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~----------~~gw~~~f~i~~~~~~i~~i~~~~ 382 (534)
...|...+++.+..|++.||+++|++.....+|..++..+...... ..+..+.|...+++.++..++++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888877777777666643221 113567777777666555444443
No 229
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.49 E-value=2.6e-06 Score=80.42 Aligned_cols=244 Identities=15% Similarity=0.148 Sum_probs=143.6
Q ss_pred hhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHH
Q 009469 222 DRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLL 301 (534)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll 301 (534)
+....++..-++-+.+|....++|.++........+...+.|.++|+.|||+.-+.-++.+.+++ +.-.++ .+-.++
T Consensus 52 gDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSp--qYkVLm 128 (454)
T KOG4332|consen 52 GDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSP--QYKVLM 128 (454)
T ss_pred hhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCC--ceEEEe
Confidence 33445566666677889999999998888888888899999999999999997666555555443 233344 677899
Q ss_pred HHHHHHhhcccchhhHHHHH-HhhhccCCcchhHHHHHH--------HHHHHHHHHHHHHHHHhhccc--CchHHHHHHH
Q 009469 302 IMRAFMGIGEGVAMPAMNNM-LSKWIPVSERSRSLAFVY--------SGMYLGSVTGLAVSPILIQKF--GWPSVFYSFG 370 (534)
Q Consensus 302 ~~r~l~Gig~g~~~~~~~~~-i~~~~~~~~rg~~~gi~~--------~~~~lG~~igp~i~~~l~~~~--gw~~~f~i~~ 370 (534)
++|++.|+..+..+.+.-++ +.|.- ++|+.-.-+.. .+..+-.+++.+.+-.+.+.+ |.-.+|-..+
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAa 206 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAA 206 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHH
Confidence 99999999999888887764 44543 33433222211 233444555666666666654 3445555444
Q ss_pred HHHHHHHHHHHHhhcC---CCCCChhhhHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHH-H
Q 009469 371 SLGSIWFALWLKKAYS---SPKEDPELRAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLT-W 446 (534)
Q Consensus 371 ~~~~i~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~-~ 446 (534)
.+..+...+.+....+ +|.+.+.....-+ ...+.+..++++.++.....+.-...+.+.+ |
T Consensus 207 cfLaigmAvil~~W~ENygdps~~kdlltqf~---------------gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLW 271 (454)
T KOG4332|consen 207 CFLAIGMAVILSSWSENYGDPSENKDLLTQFK---------------GAARAIASDEKIALLGAIQSLFEGSMYTFVFLW 271 (454)
T ss_pred HHHHHHHHHHHhhhhhccCChhhhHHHHHHhh---------------HhHHHHhcchHHHHHHHHHHHHhhhhheeeeee
Confidence 4444444333322221 1211111111100 1233456677776666665555555544433 3
Q ss_pred HHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 447 MPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLV 488 (534)
Q Consensus 447 lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g 488 (534)
.|..-.+. ...--|.+++-+.++.++|.-+..++..|-.
T Consensus 272 TPaLspn~---e~iPhGfiFatFMlASmLGSSla~Rl~s~s~ 310 (454)
T KOG4332|consen 272 TPALSPND---EEIPHGFIFATFMLASMLGSSLASRLLSRSS 310 (454)
T ss_pred cccCCCCc---ccCCchhHHHHHHHHHHHhhHHHHHHHhcCC
Confidence 33222111 1123467777777888888887777666543
No 230
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.45 E-value=1.1e-05 Score=71.66 Aligned_cols=115 Identities=10% Similarity=0.106 Sum_probs=95.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHH
Q 009469 240 NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMN 319 (534)
Q Consensus 240 s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~ 319 (534)
++..--.-.++......+.+++.+.+.+++|.|+.+++|.+.+.+-.... +-+ +.+.++.+.++.|++.+..+++..
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhh
Confidence 33333345666777788888899999999999999999999988665544 334 678899999999999999999999
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 320 NMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (534)
Q Consensus 320 ~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~ 357 (534)
.++.+...++++++..+++......+.++|.++.-.+.
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888888887766553
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.45 E-value=1.9e-05 Score=80.02 Aligned_cols=161 Identities=13% Similarity=0.100 Sum_probs=125.9
Q ss_pred hhhhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-hhCCchHHHHHHHHHHHHHHHHhhhc-cCCh
Q 009469 221 MDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-KFGGKPVLGFGVIWWSVATVLTPVAA-RIGL 297 (534)
Q Consensus 221 ~~~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~g~~~~~i~~~l~~~~~-~~~~ 297 (534)
+..++.-..+.++ .+.||++..+...+......|..++....|++.. |.+++++..+|+.+.+++..+..++. ..+.
T Consensus 222 ~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~ 301 (403)
T PF03209_consen 222 LAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSP 301 (403)
T ss_pred HHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3444445555555 6778999999999999999999999999999877 67788888888888877776655442 2256
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc----------cCchHHHH
Q 009469 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK----------FGWPSVFY 367 (534)
Q Consensus 298 ~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~----------~gw~~~f~ 367 (534)
+.+...-++.|++.|.......+..-+...+++-|..+|.+.....++..++.+++|.+.|. .+|..+|.
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~ 381 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFA 381 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHH
Confidence 78888999999999999999999999999999999999999999999999999999887663 13445555
Q ss_pred HHHHHHHHHHHHHH
Q 009469 368 SFGSLGSIWFALWL 381 (534)
Q Consensus 368 i~~~~~~i~~i~~~ 381 (534)
+-+++.++.+++..
T Consensus 382 lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 382 LEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555544444433
No 232
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.44 E-value=8.4e-06 Score=81.89 Aligned_cols=161 Identities=14% Similarity=0.198 Sum_probs=125.1
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHhh-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh
Q 009469 212 CFSAFLLCNMDRVNMSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP 290 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~ 290 (534)
..+..|+........+..++.+..+ .|.+..+.....+.+..+..+|.+++.++..|+...+.+.+..++..+.++..+
T Consensus 241 gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~ 320 (422)
T COG0738 241 GVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVA 320 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555666666666666555 888999999999999999999999999999999999999888888888777777
Q ss_pred hhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHH
Q 009469 291 VAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFG 370 (534)
Q Consensus 291 ~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~ 370 (534)
+.. +.. -+.+-++.|+..+..+|...+.-.+..| +.....|..-....+|+++-|.+.|++.|..|-...+.+..
T Consensus 321 l~~--g~v-~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~p 395 (422)
T COG0738 321 LIG--GVV-ALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVP 395 (422)
T ss_pred Hhc--ChH-HHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHH
Confidence 877 533 3445677899999999999999999997 33444444455667899999999999999999887776555
Q ss_pred HHHHHHH
Q 009469 371 SLGSIWF 377 (534)
Q Consensus 371 ~~~~i~~ 377 (534)
.++.+..
T Consensus 396 llc~lyV 402 (422)
T COG0738 396 LLCYLYV 402 (422)
T ss_pred HHHHHHH
Confidence 4444444
No 233
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.43 E-value=2.5e-05 Score=81.75 Aligned_cols=156 Identities=9% Similarity=0.027 Sum_probs=99.8
Q ss_pred hHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh---ccCChHH
Q 009469 224 VNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA---ARIGLPF 299 (534)
Q Consensus 224 ~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~---~~~~~~~ 299 (534)
..+....|.+ .+.+|.++.+.++.......+..++..+.+.+.++.++++.+.....+..++.++.... ...+++.
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~ 314 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLW 314 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 3444455654 55569999999999888888888888888887755544444333333333333222211 1113444
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~ 379 (534)
+++..++.++|.+...+......- .-....+|++.++.+.....+..+++.+++++... +-.+.|...+++..+....
T Consensus 315 ~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 315 SVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHH
Confidence 567777888888877777664321 11233579999999998888899999999988665 5566676666555544444
Q ss_pred HH
Q 009469 380 WL 381 (534)
Q Consensus 380 ~~ 381 (534)
.+
T Consensus 393 ~~ 394 (413)
T PRK15403 393 TL 394 (413)
T ss_pred HH
Confidence 33
No 234
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.41 E-value=1.4e-05 Score=85.47 Aligned_cols=139 Identities=13% Similarity=0.060 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCchH-------HHHHHHHHHHHHHHHh-----hhc---cCChHHHHHHHHHHh
Q 009469 244 VGLIQSSFFWGYLLTQIVGGIWADKFGGKPV-------LGFGVIWWSVATVLTP-----VAA---RIGLPFLLIMRAFMG 308 (534)
Q Consensus 244 ~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~-------l~~g~~~~~i~~~l~~-----~~~---~~~~~~ll~~r~l~G 308 (534)
..++.++..+...+..++.+++.||+++|+. +.+|.++.+++.+..+ +.. ..+.+.++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566667777787889999999999999974 7777777776664321 221 235666778889999
Q ss_pred hcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc---------c-CchHHHHHHHHHHHHHHH
Q 009469 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK---------F-GWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 309 ig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~---------~-gw~~~f~i~~~~~~i~~i 378 (534)
+|.+...++..+++.+..|++.++.++|++.....+|..+|..++...... . ...+.|...++..+++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998888665310 1 135666666666665555
Q ss_pred HHHH
Q 009469 379 LWLK 382 (534)
Q Consensus 379 ~~~~ 382 (534)
+++.
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 5444
No 235
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.38 E-value=3.5e-06 Score=88.76 Aligned_cols=177 Identities=9% Similarity=0.068 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHH-HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCc---------hHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPM-SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK---------PVLGF 277 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr---------~~l~~ 277 (534)
.+..+++..+........+....|.+ .+.+|.+..+.|++.++..+...+..+++|.++||.-+| ..-.+
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i 338 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTI 338 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhH
Confidence 34455556666666667777777765 667899999999999999999999999999999998652 22244
Q ss_pred HHHHHHHHHHHHhhhccCCh-HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 278 GVIWWSVATVLTPVAARIGL-PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~~~~~-~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l 356 (534)
+....+++.+..++....+. ..++..-+..++. |...+....-..+.. +++-+..+|+.+....+.+.++|.+.+.+
T Consensus 339 ~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~-g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 339 AFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS-GFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred HHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc-ccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 55555555666666553122 2222222222222 222222223333334 77889999999999999999999999999
Q ss_pred hcc---cCchHHHHHHHHHHHHHHHHHHHhhcC
Q 009469 357 IQK---FGWPSVFYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 357 ~~~---~gw~~~f~i~~~~~~i~~i~~~~~~~~ 386 (534)
... ..|+++|++.+++.++..+++.++...
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~ 449 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIFLFFGSG 449 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchheeEeecC
Confidence 842 369999999999888887666665433
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.30 E-value=5.2e-09 Score=110.71 Aligned_cols=165 Identities=13% Similarity=0.077 Sum_probs=109.7
Q ss_pred hHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh--h-h-ccC----
Q 009469 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP--V-A-ARI---- 295 (534)
Q Consensus 224 ~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~--~-~-~~~---- 295 (534)
.......+.+.+..+.+.. -+......+...++.++...+.||+|||++++++.++.+++.+.++ . . .+.
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344455666777777666 1222233344556667777999999999999999888887777664 1 1 111
Q ss_pred ChHHHHHHHHHHhhccc-chhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEG-VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g-~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~ 374 (534)
++. .++.-.+..++.+ +..+....+.+|.+|.+.|+++.++......++..+++.+...+.+..+-...+++.+.+.+
T Consensus 348 ~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 348 SIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCL 426 (451)
T ss_pred ccc-cceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHH
Confidence 111 1222222222222 33455668889999999999999999999999999999988888877663456666676767
Q ss_pred HHHHHHHHhhcCCCCCC
Q 009469 375 IWFALWLKKAYSSPKED 391 (534)
Q Consensus 375 i~~i~~~~~~~~~~~~~ 391 (534)
+..++.+++.||+..+.
T Consensus 427 i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 427 IAIIFVYFFLPETKGKT 443 (451)
T ss_pred HHHhheeEEEeeCCCCC
Confidence 77777777777765443
No 237
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.27 E-value=6.6e-07 Score=90.75 Aligned_cols=178 Identities=10% Similarity=-0.007 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHH----HHH-----HHHHHHHHHHHHHHHHHhhhCCchHHHH
Q 009469 207 VVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGL----IQS-----SFFWGYLLTQIVGGIWADKFGGKPVLGF 277 (534)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~----i~s-----~~~l~~~~~~~~~G~l~Dr~Grr~~l~~ 277 (534)
..++..+...|+.-...+..+..+..+.+..++.+..... -.+ +...++..+.++...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4555566666666666666667777777877776554333 111 2223333455667778999999999999
Q ss_pred HHHHHHHHHHHHhhhccC--ChHHHHHHHHHHh-hcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 009469 278 GVIWWSVATVLTPVAARI--GLPFLLIMRAFMG-IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (534)
Q Consensus 278 g~~~~~i~~~l~~~~~~~--~~~~ll~~r~l~G-ig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~ 354 (534)
|.+++++..+..++..+. +-..++++-.+.. ++.-+.......+.+|.||.+-|+..-|+..+..-.|+++|.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 999999999988877631 1111222222222 1222334455667799999999999999999999999999999999
Q ss_pred Hhhc-----ccCchHHHHHHHHHHHHHHHHHHHhh
Q 009469 355 ILIQ-----KFGWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 355 ~l~~-----~~gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
++.+ ..+.++++++++....+..++.+++.
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9998 67899999999988877766665554
No 238
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.24 E-value=3.8e-05 Score=82.84 Aligned_cols=181 Identities=15% Similarity=0.087 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHH
Q 009469 209 VLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l 288 (534)
++.+.+..+....+...+..+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+.+.+.++.++
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~ 375 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVI 375 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHH
Confidence 33444444444455555566677777777776544 55555666666777778899999999999999999999999988
Q ss_pred Hhhhcc-----------CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 289 TPVAAR-----------IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (534)
Q Consensus 289 ~~~~~~-----------~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~ 357 (534)
++.... ..+..+....+.......+..+....+.+|.+|.+-|+++.++......+...+-......+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 376 LAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 775421 011222222222222222334555578899999999999999987766665554444444444
Q ss_pred cccCchHHHHHHHHHHHHHHH-HHHHhhcCCCCC
Q 009469 358 QKFGWPSVFYSFGSLGSIWFA-LWLKKAYSSPKE 390 (534)
Q Consensus 358 ~~~gw~~~f~i~~~~~~i~~i-~~~~~~~~~~~~ 390 (534)
...++...|...+..+.+... ..+...|+....
T Consensus 456 ~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 456 EALGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HhccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 444455677777766666666 455556655443
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.22 E-value=9.9e-05 Score=78.01 Aligned_cols=181 Identities=13% Similarity=-0.030 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHH-H-hhhCCCcc-----h-----hHHHHHHHHHHHHHHHHHHHHHHhhhCC-chH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPM-S-KEFNWNST-----T-----VGLIQSSFFWGYLLTQIVGGIWADKFGG-KPV 274 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~s~~-----~-----~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~ 274 (534)
.+..++...++.++....+-.+...+ . +.|+-++. + -.|....+.+...+.+++.-++.+++|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 34445555666666555554444443 3 23443221 1 2244555566666777788889999995 677
Q ss_pred HHHHHHHHHHHHHHHhhhccC--C-----------------hHHHHHHHHHHhhcccchhhHHHHHHhhhccC--Ccchh
Q 009469 275 LGFGVIWWSVATVLTPVAARI--G-----------------LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPV--SERSR 333 (534)
Q Consensus 275 l~~g~~~~~i~~~l~~~~~~~--~-----------------~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~--~~rg~ 333 (534)
..++.++.+++.+...+.... | .+..++...+.|+..+..+..-++++++..++ ++.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 788888888887777654310 0 25677778889999999999999999999985 45599
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccC--chHHHHHHHHHHHHHHHHHHHhhcCCC
Q 009469 334 SLAFVYSGMYLGSVTGLAVSPILIQKFG--WPSVFYSFGSLGSIWFALWLKKAYSSP 388 (534)
Q Consensus 334 ~~gi~~~~~~lG~~igp~i~~~l~~~~g--w~~~f~i~~~~~~i~~i~~~~~~~~~~ 388 (534)
.+|+++.+..+..++..+..|.+.+.+| -.+++.+.++..++..++.++..|+.+
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999988888666554 566778788888888888777777654
No 240
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.21 E-value=0.0031 Score=66.86 Aligned_cols=284 Identities=10% Similarity=0.031 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhCCchHHHHHHHHHHH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVLGFGVIWWSV 284 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i 284 (534)
+..++.+.+..|+..+.++..-..-..+.-. ...+..+.++=....+ ...+...+..++++++++.+++-+..+.+..
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~ 101 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLG 101 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4555555555555544444332221111000 1245556666554444 4455677789999999999987766655555
Q ss_pred HHHHHhhh--cc-----CC----------------------hHHHHHHHHHHhhcccchhh-HHHHHHhhhccCCcchhH
Q 009469 285 ATVLTPVA--AR-----IG----------------------LPFLLIMRAFMGIGEGVAMP-AMNNMLSKWIPVSERSRS 334 (534)
Q Consensus 285 ~~~l~~~~--~~-----~~----------------------~~~ll~~r~l~Gig~g~~~~-~~~~~i~~~~~~~~rg~~ 334 (534)
...++++. +. .+ .|.+.+.-++.-+-.....+ .-..+..|.++.+|-.+.
T Consensus 102 fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRf 181 (491)
T PF03219_consen 102 FFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRF 181 (491)
T ss_pred HHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 55444432 10 00 11222222222222233333 457888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc---------ccCchHHHHHHH-HH---HHHHHHHHHHhhcCCCCCChhhhHHHHhh
Q 009469 335 LAFVYSGMYLGSVTGLAVSPILIQ---------KFGWPSVFYSFG-SL---GSIWFALWLKKAYSSPKEDPELRAEEKRH 401 (534)
Q Consensus 335 ~gi~~~~~~lG~~igp~i~~~l~~---------~~gw~~~f~i~~-~~---~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 401 (534)
.+++..+.++|.++++.+..++.+ .-.|...+.... ++ +++...+.... .+...+++.......
T Consensus 182 Ypl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~-~~~vl~~~~~~~~~~-- 258 (491)
T PF03219_consen 182 YPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYM-NKNVLTDPRFYPSAK-- 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCccccchhhh--
Confidence 999999999999999998888877 123543332221 11 11111111122 211111111100000
Q ss_pred hhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhh---HHHHHHHHHHHHHHHH
Q 009469 402 ILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTES---GLFCVLPWLTMAVFAN 478 (534)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~---g~l~~~~~~~~iig~~ 478 (534)
.......+..-...++.+++.|.+..+++...++......+....-..+++.+.-+...+ |-.....++..++..+
T Consensus 259 -~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~ 337 (491)
T PF03219_consen 259 -KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMF 337 (491)
T ss_pred -cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111122456778889988888888888888777777766666666543222222 3344555666666667
Q ss_pred HHHHHHHHhhcccchH
Q 009469 479 MGGWIADTLVSKGLSI 494 (534)
Q Consensus 479 i~g~l~dr~g~r~~~i 494 (534)
+++.+.+|+|.+...+
T Consensus 338 l~~~iir~~GW~~~Al 353 (491)
T PF03219_consen 338 LSSNIIRRFGWRTAAL 353 (491)
T ss_pred HHHHHHHHhhHHHHHH
Confidence 7888888888776433
No 241
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.19 E-value=0.00016 Score=71.96 Aligned_cols=263 Identities=12% Similarity=0.022 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-----hhCCchHHHH-HH
Q 009469 206 WVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-----KFGGKPVLGF-GV 279 (534)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D-----r~Grr~~l~~-g~ 279 (534)
...+.++.+.+.+.+.-..... .+|.+.+.-|.|-+..+....++ .. ...-++|.++.| |+||||..++ +.
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 4455666667777777777777 88988887788877766433222 12 124568888999 9999986432 22
Q ss_pred HHHHHHHHHHhhhc---------cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHH
Q 009469 280 IWWSVATVLTPVAA---------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGL 350 (534)
Q Consensus 280 ~~~~i~~~l~~~~~---------~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp 350 (534)
.+....+.+.+... .++...+....++.-+..+....+.-.+.-.+..+++.|-+......+...|..++.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 22222222222221 112223333445556666666777777777888888888887776666666666665
Q ss_pred HHHHHhhc-------ccCch---------HHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCcccccccc
Q 009469 351 AVSPILIQ-------KFGWP---------SVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSV 414 (534)
Q Consensus 351 ~i~~~l~~-------~~gw~---------~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (534)
.+.-.+.. ...|+ .-+++.+.+..+.-.+..+..++.+....+ +.... -....
T Consensus 187 ~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~---e~~~~--------i~~~y 255 (510)
T KOG3574|consen 187 VVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDE---ELELG--------IHESY 255 (510)
T ss_pred ceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhh---hhhcC--------HHHHH
Confidence 54333322 01222 234445555555554444444433332111 00000 00011
Q ss_pred ccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 415 IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL 487 (534)
Q Consensus 415 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~ 487 (534)
.-++++++-|.+..++......-.++.+-....+.-+.+ .|++...-+++. +..+...++.+++.-|+
T Consensus 256 k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~----v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 256 KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIA----VPLVPLQIALPLYIGKW 323 (510)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeee----eehhhHHHhhhhhheee
Confidence 234566777778777777777788888878888888888 599998877665 33444444445544444
No 242
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.15 E-value=0.00054 Score=70.18 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhh
Q 009469 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 324 (534)
Q Consensus 245 g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 324 (534)
+.+.-+-.+...+..+++.++.+|+..+.=+.+..++.+++.++.++++ +.+.-+++-++.+++.|..-....++. .
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt-~ 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLT-H 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHH-H
Confidence 4466666677778888888899999877767777888899999999988 777788888999999888877777764 4
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc--hHHHHHHHHHHHHHHHHHHHhhcC
Q 009469 325 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGSLGSIWFALWLKKAYS 386 (534)
Q Consensus 325 ~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw--~~~f~i~~~~~~i~~i~~~~~~~~ 386 (534)
.+++ ..++-+.++.+.++++|+..-..+.+ .|+ |.++.+...+.++..+..++..+.
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5643 35788889999999999988877766 655 667777776666555555544443
No 243
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.11 E-value=1.7e-05 Score=62.24 Aligned_cols=75 Identities=13% Similarity=0.222 Sum_probs=70.1
Q ss_pred HHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 219 CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
.+..+..+++.+|.+.++.++|..+.||+.+..++|+.+|.+...++.++..+++.+..+.+...+..+.+++..
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356778899999999999999999999999999999999999999999998889999999999999999999887
No 244
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.05 E-value=0.024 Score=58.93 Aligned_cols=286 Identities=8% Similarity=-0.014 Sum_probs=158.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhhC---CCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhCCchHH
Q 009469 200 EQFPKRWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEFN---WNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGGKPVL 275 (534)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~i~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l 275 (534)
+..+.-|..++...+..++..+.++..- .+.+.+. .++..+.++-+...+ +..+..++.+++.+++.+.+++
T Consensus 20 pi~r~E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF 95 (509)
T COG3202 20 PIRRYELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVF 95 (509)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHH
Confidence 3344446666666665565555544333 3444443 456677888888877 6678888999999999999998
Q ss_pred HHHHHHHHHHHHHHhhhcc-------CC-----------------------hHHHHHHHHHHhhcccchhh-HHHHHHhh
Q 009469 276 GFGVIWWSVATVLTPVAAR-------IG-----------------------LPFLLIMRAFMGIGEGVAMP-AMNNMLSK 324 (534)
Q Consensus 276 ~~g~~~~~i~~~l~~~~~~-------~~-----------------------~~~ll~~r~l~Gig~g~~~~-~~~~~i~~ 324 (534)
-+-...+....+++++.-. .+ .|..-+.-++.-+-.+.... .-.....|
T Consensus 96 ~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNe 175 (509)
T COG3202 96 YIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANE 175 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666666554311 01 12222222222222233333 44567788
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC----------chHHHHHHHHHHHHHHHHHHHhhcCCCCCChhh
Q 009469 325 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG----------WPSVFYSFGSLGSIWFALWLKKAYSSPKEDPEL 394 (534)
Q Consensus 325 ~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g----------w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~ 394 (534)
.+..+|-.+.+++++.+.+++..++..+..++..+.. .+..+.+.++.+.+++.+..+.-+...+.+...
T Consensus 176 itt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~ 255 (509)
T COG3202 176 ITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFY 255 (509)
T ss_pred hhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh
Confidence 8888888999999999999999999988888876321 122233333333333333333222222211111
Q ss_pred hHHHHhhhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHH---HHHHHHH
Q 009469 395 RAEEKRHILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGL---FCVLPWL 471 (534)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~---l~~~~~~ 471 (534)
.+.... ......+..-...++.+.+.|.++.+++...++..+...+....-.-.++.+....+...+ +....++
T Consensus 256 -~~~~~k--k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgv 332 (509)
T COG3202 256 -LRAKKK--KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGV 332 (509)
T ss_pred -HHHhcc--cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHH
Confidence 000000 0000011111234667788888888888888887777666654444444433333333333 3333444
Q ss_pred H-HHHHHHHHHHHHHHhhcccc
Q 009469 472 T-MAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 472 ~-~iig~~i~g~l~dr~g~r~~ 492 (534)
. .++...+++-+.+|.|....
T Consensus 333 v~~v~~~~~~s~~ir~~GW~~~ 354 (509)
T COG3202 333 VSLVVFLFPGSNLIRRVGWFTG 354 (509)
T ss_pred HHHHHHHhhhHHHHHHhhHHHH
Confidence 4 34455567788888876643
No 245
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.05 E-value=3.7e-05 Score=59.69 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=58.3
Q ss_pred HHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH
Q 009469 214 SAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW 282 (534)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~ 282 (534)
..++........+.|+++.+.++.|+++.++|.+.++..+...++++++|.++||+++++.++.+..++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 344555566667778888888899999999999999999999999999999999999998877665543
No 246
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.93 E-value=0.00018 Score=77.49 Aligned_cols=151 Identities=15% Similarity=0.127 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHHH-hhhCCCc---chhHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHH
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPMS-KEFNWNS---TTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLGFGVIWW 282 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~---~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~g~~~~ 282 (534)
.+....+..++.++..+....+.|... .-|+.+. ...++....+.++..++.++.|.+..++++ |+.++++.+++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 344444555555555556666666643 3455444 357888888999999999999999998876 55566777777
Q ss_pred HHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 283 SVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 283 ~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
.++.-+++.....|....+..-++.|++.|....+......-..|+++.|.+.|+......+|+.+|..+...+..
T Consensus 391 ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 391 TAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 7665555554433455567788899999999888888888888999999999999999999999999887766543
No 247
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.89 E-value=0.00077 Score=71.62 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHHHHhhh-CCC----cchhHHHHHHHHHHHHHHHHHHHHHHhhhCC--ch----
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAILPMSKEF-NWN----STTVGLIQSSFFWGYLLTQIVGGIWADKFGG--KP---- 273 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s----~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr--r~---- 273 (534)
|...++.+++...+.+..+......+..+.++. +.+ .-..+|..++..+..++.+|+.+++-.|..+ |.
T Consensus 266 r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~ 345 (493)
T PRK15462 266 ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIW 345 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcH
Confidence 344444444444444444444444444444432 111 1236788899999888888888888777733 21
Q ss_pred -HHHHHHHHHHHHHHHHhhhc-------cCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHH-HHH
Q 009469 274 -VLGFGVIWWSVATVLTPVAA-------RIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSG-MYL 344 (534)
Q Consensus 274 -~l~~g~~~~~i~~~l~~~~~-------~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~-~~l 344 (534)
=+.+|+++.+++.+++.++. ..+.+.+++.-++.++|.-+..|...+.+++..|++-||+.||.+... ..+
T Consensus 346 ~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~ 425 (493)
T PRK15462 346 GKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAI 425 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 16778888888876664321 125566888889999999999999999999999999999999999763 367
Q ss_pred HHHHHHHHHHHhhcc------------cCchHHHHHHHHHHHHH
Q 009469 345 GSVTGLAVSPILIQK------------FGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 345 G~~igp~i~~~l~~~------------~gw~~~f~i~~~~~~i~ 376 (534)
|..++..+++..... ..+...|...+...+++
T Consensus 426 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 426 ANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 777777666655311 12344566666655544
No 248
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.89 E-value=0.00017 Score=71.92 Aligned_cols=140 Identities=19% Similarity=0.189 Sum_probs=115.1
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC--CchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcc
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG--GKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE 311 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G--rr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~ 311 (534)
...||.++.+.|-+.+...++..+.+....+..||.. -+-.+..++.+..-..++.+.+. ....+.++-.+..+..
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~--~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR--TPVVLYLGSTLKSFST 366 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc--cchhhhHHHHHHHHHH
Confidence 4678999999999999999999999999999999987 77778888888887788888777 5566788888888888
Q ss_pred cchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-CchHHHHHHHHHHHH
Q 009469 312 GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-GWPSVFYSFGSLGSI 375 (534)
Q Consensus 312 g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-gw~~~f~i~~~~~~i 375 (534)
+...+....++....|.++||.++|+......++-++||+++|.+.... +-+.++...+.+.++
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~ 431 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLI 431 (451)
T ss_pred HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHH
Confidence 8888999999999999999999999999999999999999998876532 223344433433333
No 249
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.87 E-value=0.00015 Score=56.22 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 009469 427 WALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLS 493 (534)
Q Consensus 427 ~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~ 493 (534)
+.+-...++.+.+...+..|+|.|+++ .|+++.+.|.+.++..+..+++.+++|+++||+++++..
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 344556677777888899999999998 699999999999999999999999999999999999743
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.83 E-value=0.00024 Score=69.89 Aligned_cols=280 Identities=12% Similarity=0.059 Sum_probs=159.9
Q ss_pred hhCCCcchhH-HHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccch
Q 009469 236 EFNWNSTTVG-LIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVA 314 (534)
Q Consensus 236 ~~g~s~~~~g-~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~ 314 (534)
+.+++..++. =+.-+..-.+.+.-++.=.+.|-...|+++++-.+...+..++.-+.+ +.+.+=+.-++.|...+.
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tAa- 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATAA- 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHHH-
Confidence 3355555443 122222333444445555689999999998877666666666666666 666676777788877553
Q ss_pred hhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc--hHHHHHHHHHHHHHHHHHHHhhcCCCCCCh
Q 009469 315 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW--PSVFYSFGSLGSIWFALWLKKAYSSPKEDP 392 (534)
Q Consensus 315 ~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw--~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~ 392 (534)
-.+.++++-...+++++-++.|...++.-.|-.+|..++..++..-.+ ...-++......+..++.++ .|..++..-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~f-LP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALF-LPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhh-CCCCchhhh
Confidence 467788888888999999999999999999999999988888764333 32223322222333333333 333222111
Q ss_pred hhhHHHHhhhhCCCcccccc------------ccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-h
Q 009469 393 ELRAEEKRHILGGSISKEAV------------SVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFN-L 459 (534)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s-~ 459 (534)
....+++....+.++..... -...+....++|+++.-.+...+...+++.+.+|....-.+...-+ .
T Consensus 191 f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~ 270 (433)
T KOG3810|consen 191 FHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPAN 270 (433)
T ss_pred hhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchh
Confidence 11111110000000000000 0123445567888888888888888888888888777766642111 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 009469 460 TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAV 526 (534)
Q Consensus 460 ~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 526 (534)
.-.|..=++..+.++++.++.|.+--.+.|.+- .+++++.+..+..++........++..
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~-------~ll~~~s~~~agllf~m~~t~~Iw~~Y 330 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD-------LLLAVGSAVQAGLLFIMAQTQHIWVCY 330 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhH-------HHHHHHHHHhhhhhhhhhcccceehhh
Confidence 123445556667777777778877544444422 244444444454555555555554433
No 251
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00015 Score=76.93 Aligned_cols=162 Identities=13% Similarity=0.143 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHhh-hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh----hCCchHHHHHHHHHHH
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMSKE-FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADK----FGGKPVLGFGVIWWSV 284 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr----~Grr~~l~~g~~~~~i 284 (534)
...++..++.....+.+...+|.+.++ .|++..+.+.+...+.++.+++.+++|+++|| ..+|..+.....++.+
T Consensus 276 w~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 276 WPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 334455566667777778888887777 56999999999999999999999999999999 6677766666555554
Q ss_pred HH-HHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcch-hHHHHHHHHHHHHHHH-HHHHHHHhhcccC
Q 009469 285 AT-VLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERS-RSLAFVYSGMYLGSVT-GLAVSPILIQKFG 361 (534)
Q Consensus 285 ~~-~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg-~~~gi~~~~~~lG~~i-gp~i~~~l~~~~g 361 (534)
.. +...... +.......-+..+.+.....+.+...+++......|. ...+....+.+.++++ +++..+.....++
T Consensus 356 ~g~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~ 433 (495)
T KOG2533|consen 356 IGAISLLAAA--VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG 433 (495)
T ss_pred HHHHHHHhhc--cchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchh
Confidence 44 3333332 2322333333333445555666677777776554443 3333344444444444 4444444455678
Q ss_pred chHHHHHHHHHH
Q 009469 362 WPSVFYSFGSLG 373 (534)
Q Consensus 362 w~~~f~i~~~~~ 373 (534)
|.+.|+.....+
T Consensus 434 ~~~~f~~~~~~~ 445 (495)
T KOG2533|consen 434 WGAVFYMLVAAC 445 (495)
T ss_pred hhhHHHHHHHHH
Confidence 888885444333
No 252
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.73 E-value=0.0058 Score=59.92 Aligned_cols=72 Identities=10% Similarity=0.092 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhc
Q 009469 252 FWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWI 326 (534)
Q Consensus 252 ~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~ 326 (534)
.+..+..+++.+.+..++|-|++++++...+......--. + .+..++-.....|+|.+..+..-.+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~-p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLE-P--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-h--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 3444556666678999999999999888877654332211 2 4677888999999999988887777766654
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.0024 Score=68.97 Aligned_cols=154 Identities=16% Similarity=0.012 Sum_probs=105.1
Q ss_pred HHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCCh-HHHHHHHHHHhh
Q 009469 231 LPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGL-PFLLIMRAFMGI 309 (534)
Q Consensus 231 ~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~-~~ll~~r~l~Gi 309 (534)
......+|.+.. +................+.+.|++|||..+..+.++..++.++.++...... +..++...+..+
T Consensus 342 ~~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
T KOG0255|consen 342 SLNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKF 418 (521)
T ss_pred hhhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 333444454433 3333333355555566689999999999999999999999999988764322 135555555556
Q ss_pred cccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCC
Q 009469 310 GEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSP 388 (534)
Q Consensus 310 g~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~ 388 (534)
+.+..+.....+.+|++|+..|..+.+.......+|.+++|.+...... ......+.+.+.+..+...+...+.|++.
T Consensus 419 ~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 419 FIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 6666677779999999999999999999999999999999998766544 22222222245555555555545555543
No 254
>PTZ00207 hypothetical protein; Provisional
Probab=97.70 E-value=0.00058 Score=73.94 Aligned_cols=171 Identities=6% Similarity=-0.052 Sum_probs=115.9
Q ss_pred HHHHHHHHHhhhhHHHHhHHHHHhhh-CCCc-chhH-HHHHHHHHHHHHHHHHHHHHHhhh---C-----CchHHHHHHH
Q 009469 212 CFSAFLLCNMDRVNMSIAILPMSKEF-NWNS-TTVG-LIQSSFFWGYLLTQIVGGIWADKF---G-----GKPVLGFGVI 280 (534)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~-~~~g-~i~s~~~l~~~~~~~~~G~l~Dr~---G-----rr~~l~~g~~ 280 (534)
++..+++.......+..-+.++.+.+ |.+. .+.. ++.+++.++..+|-+..|.+.... . +|++.+....
T Consensus 358 l~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~ 437 (591)
T PTZ00207 358 LLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPS 437 (591)
T ss_pred HHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHH
Confidence 33334444333333333455666777 6522 3222 277888888888888888877221 1 1223333333
Q ss_pred HHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHH-HHHHHHhhcc
Q 009469 281 WWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTG-LAVSPILIQK 359 (534)
Q Consensus 281 ~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~ig-p~i~~~l~~~ 359 (534)
++.++.+++++.. ....+++.-++.|++.|..++.....++|+|. |+-|+-..+......+|..+. -.+.|.+.|+
T Consensus 438 ~~~~~~lll~~~~--p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ 514 (591)
T PTZ00207 438 VCIITMLTLFLTL--PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQ 514 (591)
T ss_pred HHHHHHHHHHHHC--CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3666666666664 33578999999999999999999999999997 888988888888888888776 5677777753
Q ss_pred c----------C---chHHHHHHHHHHHHHHHHHHHhhc
Q 009469 360 F----------G---WPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 360 ~----------g---w~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
- | ++.+|++++.++++..++...+..
T Consensus 515 ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~ 553 (591)
T PTZ00207 515 QADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHL 553 (591)
T ss_pred HHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheee
Confidence 1 2 678898888888877776655443
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.63 E-value=0.00026 Score=73.04 Aligned_cols=111 Identities=20% Similarity=0.290 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhccC-------ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCC---cchhHHHHHHHHH
Q 009469 273 PVLGFGVIWWSVATVLTPVAARI-------GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVS---ERSRSLAFVYSGM 342 (534)
Q Consensus 273 ~~l~~g~~~~~i~~~l~~~~~~~-------~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~---~rg~~~gi~~~~~ 342 (534)
+++++|.+++++|.+++.++... ..+.++++.++.++|.|+.-+...++++|.++++ +|...+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788899999999885544211 2357888889999999999999999999999865 4667888899999
Q ss_pred HHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 343 YLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 343 ~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
++|..+++.+.+++-++.||.+.|.+.++..++..+.++..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888887777666544
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.61 E-value=0.00057 Score=71.95 Aligned_cols=125 Identities=15% Similarity=0.228 Sum_probs=109.1
Q ss_pred HHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHH-HHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhh
Q 009469 231 LPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGG-IWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGI 309 (534)
Q Consensus 231 ~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G-~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gi 309 (534)
-++...++++..+.+...+...+...+++++.. .+...+|-|+++..|++.-.+..++.++++ +.|+++...++.++
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~~ 343 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVAL 343 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHHh
Confidence 345677899999999998888888888888877 677889999999999999999999999999 67777777777766
Q ss_pred cccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 310 GEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 310 g~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
. ....++..+.++.+..++++|+++++......+.++++|.+-+.+..
T Consensus 344 ~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 344 A-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred h-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 5 56679999999999999999999999999999999999999888754
No 257
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0033 Score=68.04 Aligned_cols=179 Identities=15% Similarity=0.149 Sum_probs=132.7
Q ss_pred chHHHHHHHHHHHHHHHhhh-hHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-CCchHHHHHHHH
Q 009469 204 KRWVVVLLCFSAFLLCNMDR-VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKF-GGKPVLGFGVIW 281 (534)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~g~~~ 281 (534)
..|+..........+..+.. ......+.++..+++.+...+.-....+.-...+.++++++++|-| ||-+++.++.++
T Consensus 34 g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i 113 (571)
T KOG1237|consen 34 GGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLI 113 (571)
T ss_pred chhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34655554444444444433 2345677788889998888888888888888899999999999985 788999999998
Q ss_pred HHHHHHHHhhhcc--------------------CC---hHHHHHHHHHHhhcccchhhHHHHHHhhhcc---CC---cch
Q 009469 282 WSVATVLTPVAAR--------------------IG---LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIP---VS---ERS 332 (534)
Q Consensus 282 ~~i~~~l~~~~~~--------------------~~---~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~---~~---~rg 332 (534)
..++.++..+... .+ ...+.....+..+|.|+.-+...+.-+|-++ ++ .+.
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~ 193 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIP 193 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcc
Confidence 8888655443210 00 1245666667788999999999999999998 22 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHH
Q 009469 333 RSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 333 ~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~ 382 (534)
..+.++....++|..++..+..+.-+..+|.+.|.+..+..++.+++++.
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 67788888899999999988888878899999998888777776666553
No 258
>PRK03612 spermidine synthase; Provisional
Probab=97.44 E-value=0.0096 Score=64.01 Aligned_cols=144 Identities=15% Similarity=0.153 Sum_probs=85.5
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH---HHHHHHhhhcc--CCh-HHHHHHHHHH
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS---VATVLTPVAAR--IGL-PFLLIMRAFM 307 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~---i~~~l~~~~~~--~~~-~~ll~~r~l~ 307 (534)
.-.+|.+....+.+.+++.+|..+|+.+++++.++.-++... +-..+.. ++..+...... ... ..++...++.
T Consensus 42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445688888999999999999999999999886433222221 1111111 11111111110 011 1223334455
Q ss_pred hhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchHHHHHHHHHHHHHHHH
Q 009469 308 GIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ-KFGWPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 308 Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~-~~gw~~~f~i~~~~~~i~~i~ 379 (534)
++..|+..|....+..+.. .++-+...|-.+....+|+++|.++.+++.- .+|-..+.++.+.+.+++.++
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred HHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 6666666666666554432 2345678888999999999999999887654 677655555555555444433
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.43 E-value=0.0012 Score=68.76 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=61.7
Q ss_pred HHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHH-HHHHHHHHHHHhhhc
Q 009469 215 AFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFG-VIWWSVATVLTPVAA 293 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g-~~~~~i~~~l~~~~~ 293 (534)
..+..+.....+.+.++.+.+++|+++.++|.+.++--+..+++.|++|+++||+-+|+.++++ .+....+.+++.+.+
T Consensus 19 f~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv~ 98 (618)
T KOG3762|consen 19 FYLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFVP 98 (618)
T ss_pred eeeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeecc
Confidence 3444445556677888889999999999999999999999999999999999999876665554 555555556655553
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.26 E-value=0.011 Score=61.51 Aligned_cols=142 Identities=19% Similarity=0.183 Sum_probs=104.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhCCc---h----HHHHHHHHHHHHHHHHhhh--------ccCChHHHHHHHHH
Q 009469 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGK---P----VLGFGVIWWSVATVLTPVA--------ARIGLPFLLIMRAF 306 (534)
Q Consensus 242 ~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr---~----~l~~g~~~~~i~~~l~~~~--------~~~~~~~ll~~r~l 306 (534)
-...|..+...+..++.+|+..++.-+.+++ + -+-+|+++.+.+.++.... ...+.+.++..-++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457888999998899999888888885544 1 2455666666666554433 12357788899999
Q ss_pred HhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHH------hhcccCchHHHHHHHHHHHHHHHHH
Q 009469 307 MGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI------LIQKFGWPSVFYSFGSLGSIWFALW 380 (534)
Q Consensus 307 ~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~------l~~~~gw~~~f~i~~~~~~i~~i~~ 380 (534)
+++|.=+..|...+++....|+.-.+..++.+......|..++..+++. ..+...-...|+..+...++..++.
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888999999888888888888777763 2233445567777777766666555
Q ss_pred HHh
Q 009469 381 LKK 383 (534)
Q Consensus 381 ~~~ 383 (534)
+..
T Consensus 484 ~~~ 486 (498)
T COG3104 484 LLL 486 (498)
T ss_pred HHh
Confidence 443
No 261
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.94 E-value=0.01 Score=60.93 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=76.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH-----HHHhhhccCChHHHHHHHHHHhhcccch
Q 009469 240 NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT-----VLTPVAARIGLPFLLIMRAFMGIGEGVA 314 (534)
Q Consensus 240 s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~-----~l~~~~~~~~~~~ll~~r~l~Gig~g~~ 314 (534)
...+.-+....|.+|-.++.--... +.-|++.+...+-.+-.. ...-+.+ +.|.+++.-+..|+..|+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlGGa~ 352 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLGGAS 352 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhhhHH
Confidence 3456667777777776655332211 222444333332222211 2222334 5777778888999999999
Q ss_pred hhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009469 315 MPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI 357 (534)
Q Consensus 315 ~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~ 357 (534)
+......+.+-.++++|..++|....+-++|.+++.+++-.+-
T Consensus 353 YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 353 YVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888876653
No 262
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.75 E-value=0.086 Score=53.94 Aligned_cols=138 Identities=12% Similarity=0.021 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHH---H
Q 009469 208 VVLLCFSAFLLCNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWS---V 284 (534)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~---i 284 (534)
..+..++..+.....++.+..+.+++.+.+-.+.. .......+.+...+..++...+--+...|....++..++. +
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il 97 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455556777777788887777643332 2223333333333333333333333322222111211111 1
Q ss_pred HHHHHhhh-------ccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHH
Q 009469 285 ATVLTPVA-------ARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLA 351 (534)
Q Consensus 285 ~~~l~~~~-------~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~ 351 (534)
..+.+.++ ....+...++.-.+.+++.|..........++. |++. +.-+.++.++++++..+
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y----tqavm~G~a~aG~l~Sl 166 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY----TQAVMSGQALAGTLTSL 166 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH----HHHHHhcchhHhHHHHH
Confidence 11122221 112345566677778888888877777776665 3433 22333444455444443
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.66 E-value=0.0059 Score=62.63 Aligned_cols=165 Identities=12% Similarity=-0.049 Sum_probs=102.9
Q ss_pred hhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCC-chHHHHHHHHHHHHHHH-Hhhhcc-CCh
Q 009469 221 MDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG-KPVLGFGVIWWSVATVL-TPVAAR-IGL 297 (534)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~g~~~~~i~~~l-~~~~~~-~~~ 297 (534)
...+.....+......-|++....|++.....++..+++.+.|.+.||... |.++.+......++... ..+... ...
T Consensus 280 g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~ 359 (480)
T KOG2563|consen 280 GLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDS 359 (480)
T ss_pred HHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCce
Confidence 333444444444445557777889999999999999999999999999864 55555555555555322 222221 112
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC---chH-HHHHHHHHH
Q 009469 298 PFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG---WPS-VFYSFGSLG 373 (534)
Q Consensus 298 ~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g---w~~-~f~i~~~~~ 373 (534)
+.+...-.+.|++.....|...-+-.|..-|..-+...|+......+-+++-..+.+.+.+..+ |.+ .-+......
T Consensus 360 viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 439 (480)
T KOG2563|consen 360 VIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSA 439 (480)
T ss_pred EehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHH
Confidence 3344555666777777788887777777656555677788777666666777777777776655 333 233333333
Q ss_pred HHHHHHHHHhhc
Q 009469 374 SIWFALWLKKAY 385 (534)
Q Consensus 374 ~i~~i~~~~~~~ 385 (534)
.+..++..++++
T Consensus 440 ~l~~~lva~~r~ 451 (480)
T KOG2563|consen 440 LLGAILVAFFRP 451 (480)
T ss_pred HHHHHHHhhhhh
Confidence 333444444433
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.55 E-value=0.17 Score=53.28 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i 352 (534)
++..++.-++.|++.+.......++.+ .+|++ .++.+..+.+++++++.++
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 455667777888888888877777766 45443 4556666677777666554
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.46 E-value=0.07 Score=55.72 Aligned_cols=270 Identities=11% Similarity=0.024 Sum_probs=131.5
Q ss_pred HHHHHHHHHHhhhhHHHHhHHHHHhh--hCCCcchhHHHHHHHHHHHHHHHHHHHHHHh-----hhCCchHHHH------
Q 009469 211 LCFSAFLLCNMDRVNMSIAILPMSKE--FNWNSTTVGLIQSSFFWGYLLTQIVGGIWAD-----KFGGKPVLGF------ 277 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~D-----r~Grr~~l~~------ 277 (534)
++.+.+++.+.-.......+|.+.++ -+.|-++.+...-+ ...+. .-++|.++.| |+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 34455666665555544567777666 56777666542111 11111 2344555555 7899987443
Q ss_pred HHHHHHHHHHH----------Hhhhcc-------CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHH
Q 009469 278 GVIWWSVATVL----------TPVAAR-------IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS 340 (534)
Q Consensus 278 g~~~~~i~~~l----------~~~~~~-------~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~ 340 (534)
|..+..++.-+ -....+ .+...+....++.=+-.+..-.+.-.+.-.+..+++++.|..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33333333222 000000 0111122222233333344444455555566667888877777666
Q ss_pred HHHHHHHHHHHHHHHhhcc-------------cC---chHHHHHHHHHHHHHHHHHHHhhcCCCCCCh--hhhH----HH
Q 009469 341 GMYLGSVTGLAVSPILIQK-------------FG---WPSVFYSFGSLGSIWFALWLKKAYSSPKEDP--ELRA----EE 398 (534)
Q Consensus 341 ~~~lG~~igp~i~~~l~~~-------------~g---w~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~--~~~~----~~ 398 (534)
+.+.|..++..+.-.+-+. .| -..-..+.+.+.++..+...++.+|.+..+. +.+. +.
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 7777776666554444321 11 1112234455555555555555555432211 0000 00
Q ss_pred HhhhhCC-Ccccc---ccc----c---ccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHH
Q 009469 399 KRHILGG-SISKE---AVS----V---IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCV 467 (534)
Q Consensus 399 ~~~~~~~-~~~~~---~~~----~---~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~ 467 (534)
..+.... ..+.+ ... . .....+++-|.+..+++.....-.++...-.....=+.+ .|++.+..+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~l 320 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVL 320 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHH
Confidence 0000000 00000 000 1 123345677888888888888777777666666666777 6999988776654
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 009469 468 LPWLTMAVFANMGGWIADTL 487 (534)
Q Consensus 468 ~~~~~~iig~~i~g~l~dr~ 487 (534)
+ .+...++.|+++-|+
T Consensus 321 i----~~P~qii~~~~~~Kw 336 (544)
T PF13000_consen 321 I----DFPFQIILPYYIGKW 336 (544)
T ss_pred H----hhhHHHHHHHHhhhh
Confidence 3 344444555555554
No 266
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.45 E-value=0.17 Score=53.01 Aligned_cols=140 Identities=15% Similarity=0.220 Sum_probs=93.6
Q ss_pred HHHHHhhhhHHHHhHHHH---HhhhCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHh---hhCCchHHHHHHHHHHHHHHH
Q 009469 216 FLLCNMDRVNMSIAILPM---SKEFNWNST-TVGLIQSSFFWGYLLTQIVGGIWAD---KFGGKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~---~~~~g~s~~-~~g~i~s~~~l~~~~~~~~~G~l~D---r~Grr~~l~~g~~~~~i~~~l 288 (534)
.+..+.....+....|.- ....+.+.. ..++......++..+++.+.+.+.+ ++|+++++.++.++..++.++
T Consensus 249 f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~l 328 (461)
T KOG3098|consen 249 FFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLL 328 (461)
T ss_pred HHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHH
Confidence 344444444444444442 222232222 2233333444555556666677765 478999999999988888877
Q ss_pred Hhhhcc----------------CChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHH
Q 009469 289 TPVAAR----------------IGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (534)
Q Consensus 289 ~~~~~~----------------~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i 352 (534)
.-+... .++...++..+++|++-+......+.++++.+ +++|..+.+++-.-..++..++-..
T Consensus 329 i~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 329 IHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 654421 12456778889999999999999999999999 8889999999888888877766655
Q ss_pred HHHh
Q 009469 353 SPIL 356 (534)
Q Consensus 353 ~~~l 356 (534)
....
T Consensus 408 ~~~~ 411 (461)
T KOG3098|consen 408 SPYL 411 (461)
T ss_pred hhhh
Confidence 5443
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.43 E-value=0.013 Score=61.43 Aligned_cols=181 Identities=15% Similarity=0.159 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHH-HHHhhhCCCcchhHHHHHHH----HHHHHHHHHHHHHHH-hhhCCchHHHHH
Q 009469 205 RWVVVLLCFSAFLLCNMDRVNMSIAIL-PMSKEFNWNSTTVGLIQSSF----FWGYLLTQIVGGIWA-DKFGGKPVLGFG 278 (534)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~i~s~~----~l~~~~~~~~~G~l~-Dr~Grr~~l~~g 278 (534)
.|...+.++...+.............+ .....++++..+.-+..++. .+......+..+... -++..|..+..+
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeeh
Confidence 477777777777777666666444433 34566777776654443333 222222222223222 233446666666
Q ss_pred HHHHHHHHHHHhhhc-----------------------------cCChHHHHHH-HHHHhhcccchhhHHHHHHhhhccC
Q 009469 279 VIWWSVATVLTPVAA-----------------------------RIGLPFLLIM-RAFMGIGEGVAMPAMNNMLSKWIPV 328 (534)
Q Consensus 279 ~~~~~i~~~l~~~~~-----------------------------~~~~~~ll~~-r~l~Gig~g~~~~~~~~~i~~~~~~ 328 (534)
.++......+..... ..+++.+++. -++.|++.-.......++-++...+
T Consensus 340 ~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp 419 (488)
T KOG2325|consen 340 FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP 419 (488)
T ss_pred HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC
Confidence 444443333221110 0012233443 3455666666677788999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhc
Q 009469 329 SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 329 ~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
++++.+.+++.....++..+||++...+....|.|+...+.+...++...++..+.+
T Consensus 420 ~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~ 476 (488)
T KOG2325|consen 420 RDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLK 476 (488)
T ss_pred ccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888877766666555555444433
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.25 E-value=0.16 Score=53.15 Aligned_cols=130 Identities=18% Similarity=0.068 Sum_probs=95.3
Q ss_pred HHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh---hhcc-----CC
Q 009469 225 NMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP---VAAR-----IG 296 (534)
Q Consensus 225 ~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~---~~~~-----~~ 296 (534)
.++.....+...-|+++..+|..-+...+....+.++..++.+|+|..+.-.++...-.+...++. +.+. .+
T Consensus 276 sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s 355 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSIS 355 (432)
T ss_pred cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH
Confidence 345555566666699999999999999999999999999999999998887777664443333222 2221 12
Q ss_pred hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 009469 297 LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSP 354 (534)
Q Consensus 297 ~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~ 354 (534)
...++.+-++.=+|.=+..-...-++.|..|+++||...|.-.+..++-.++-..++-
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 2334444444446665667788889999999999999999999988888877666544
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.18 E-value=0.037 Score=58.30 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=95.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHh-hhccC-------ChHHHHHHHHHHhhc
Q 009469 239 WNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTP-VAARI-------GLPFLLIMRAFMGIG 310 (534)
Q Consensus 239 ~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~-~~~~~-------~~~~ll~~r~l~Gig 310 (534)
.++...+.+..+..++..++..+...+.-++.-|+++.+..++.++..+.-. +.... +.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 7888888888888888888988888888888888888888777766554322 11110 123334445666666
Q ss_pred ccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 311 EGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 311 ~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
....+-+...+++++.|+..-|+.+++..+..++|..++..++..+.+.++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 667777888999999999999999999999999999999999999987665
No 270
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.17 E-value=0.022 Score=62.94 Aligned_cols=145 Identities=12% Similarity=0.150 Sum_probs=94.0
Q ss_pred HHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhCC--chHHHHHHHHHHHHHHHHh
Q 009469 215 AFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFGG--KPVLGFGVIWWSVATVLTP 290 (534)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l-~~~~~~~~~G~l~Dr~Gr--r~~l~~g~~~~~i~~~l~~ 290 (534)
..++.......+...+|. +.+.+|+++.+++++.+...+ +.+++.+++|+++||++. |+++.+++++..++.+++.
T Consensus 338 ~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 417 (633)
T TIGR00805 338 AQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCS 417 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455556665 456799999999999988776 678999999999999984 4666666666655543311
Q ss_pred -------------------------------------hhcc---------------------------------------
Q 009469 291 -------------------------------------VAAR--------------------------------------- 294 (534)
Q Consensus 291 -------------------------------------~~~~--------------------------------------- 294 (534)
+...
T Consensus 418 ~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi 497 (633)
T TIGR00805 418 PLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCV 497 (633)
T ss_pred HHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccc
Confidence 0000
Q ss_pred -----------------CC-hHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHH-HHHHHHHHHHHHHHH
Q 009469 295 -----------------IG-LPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPI 355 (534)
Q Consensus 295 -----------------~~-~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~-~~~lG~~igp~i~~~ 355 (534)
.+ +..+++.-++..+..+...++...++-+..|+++|..++|+... ..-+|.+-+|++.|+
T Consensus 498 ~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~ 577 (633)
T TIGR00805 498 QTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGL 577 (633)
T ss_pred cCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhh
Confidence 00 11233333333333344445555566678889999999999776 445688888999998
Q ss_pred hhcc
Q 009469 356 LIQK 359 (534)
Q Consensus 356 l~~~ 359 (534)
++|.
T Consensus 578 ~iD~ 581 (633)
T TIGR00805 578 LIDV 581 (633)
T ss_pred hhhc
Confidence 8874
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.15 E-value=0.052 Score=57.07 Aligned_cols=111 Identities=13% Similarity=0.044 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCc-hHHHHHHHHHHHHHHHHhhhcc----------CChHHHHHHHHHHhhcccc
Q 009469 245 GLIQSSFFWGYLLTQIVGGIWADKFGGK-PVLGFGVIWWSVATVLTPVAAR----------IGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 245 g~i~s~~~l~~~~~~~~~G~l~Dr~Grr-~~l~~g~~~~~i~~~l~~~~~~----------~~~~~ll~~r~l~Gig~g~ 313 (534)
-.+..++.++-.+|..+..+.. .-++| +.+.+..++-.+...++.++.. .+-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4566677777777776543321 11222 1333333333333323222210 1345566778899999999
Q ss_pred hhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l 356 (534)
..+.++.+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999998888888888888888765443
No 272
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.09 E-value=0.034 Score=58.32 Aligned_cols=51 Identities=14% Similarity=0.071 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhCCChhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 445 TWMPTYYNQVLKFNLTE-SGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 445 ~~lp~~~~~~~g~s~~~-~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
.+...++.+.+|++..+ .|.+...+..+.++..+++|+++||+|.|+++..
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l 97 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVL 97 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 33444555568999999 9999999999999999999999999999986543
No 273
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.76 E-value=0.028 Score=57.99 Aligned_cols=126 Identities=17% Similarity=0.178 Sum_probs=75.6
Q ss_pred hCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhC----CchHHHH-------HHHHHHHHHHHHhhhccCChHHHHHHHH
Q 009469 237 FNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFG----GKPVLGF-------GVIWWSVATVLTPVAARIGLPFLLIMRA 305 (534)
Q Consensus 237 ~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~G----rr~~l~~-------g~~~~~i~~~l~~~~~~~~~~~ll~~r~ 305 (534)
.|.+..+.-++..+...+..+|.+++|.++||+- +-....+ +..+.+...++....+..+.+ +.+..+
T Consensus 278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~-~~~il~ 356 (493)
T KOG1330|consen 278 IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMI-FGLILF 356 (493)
T ss_pred hCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHH-HHHHHH
Confidence 3545555566778888888999999999999942 2111222 222222222222222322222 233334
Q ss_pred HHhhcc-cchhhHHHHHHhhhccCCcchhHHHHHHHHHHH-HHHHHHHHHHHhhccc-Cch
Q 009469 306 FMGIGE-GVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYL-GSVTGLAVSPILIQKF-GWP 363 (534)
Q Consensus 306 l~Gig~-g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~l-G~~igp~i~~~l~~~~-gw~ 363 (534)
+.|+-. -..++...-+..+..|+++|..++++-.....+ |-.-+|.+.|.+.++. ||+
T Consensus 357 ~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 357 LVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 445432 334556667888999999999999998775554 4555565888888863 555
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.36 E-value=0.16 Score=39.98 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 438 WGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 438 ~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
.+-+.+...+|...++ .++|..+++++.+...++.++|.+...++.++..+++
T Consensus 6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~ 58 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR 58 (85)
T ss_pred hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 3445666778888877 6999999999999999999999999999988866554
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.13 E-value=0.075 Score=50.86 Aligned_cols=101 Identities=18% Similarity=0.133 Sum_probs=56.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHh---hc--ccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhh
Q 009469 329 SERSRSLAFVYSGMYLGSVTGLAVSPIL---IQ--KFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHIL 403 (534)
Q Consensus 329 ~~rg~~~gi~~~~~~lG~~igp~i~~~l---~~--~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (534)
++|+....+...+.++|.++..+..-.- .+ .-.|++++.+.+++.++.+++...+-.+-+...+.. ++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~-k~~k~--- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKE-KQEKE--- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccc-ccccc---
Confidence 4555555566667777776654332111 11 135999999888888777777666644432222210 11000
Q ss_pred CCCccccccccccHHHhhcchhHHHHHHHHHHHH
Q 009469 404 GGSISKEAVSVIPWKLILSKAPVWALIISHFCHN 437 (534)
Q Consensus 404 ~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~ 437 (534)
+..........+.+|++..|...+......
T Consensus 78 ----~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 ----NSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----cccccccchHHHHHccchHHHHHHHHHHHh
Confidence 001111245778899999888777766544
No 276
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.96 E-value=0.48 Score=47.74 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=36.4
Q ss_pred hhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 454 VLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 454 ~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
.+|++..+.+.++....+.+++...+.|.++||+|||+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~ 101 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA 101 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 489999999999999999999999999999999999974
No 277
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=94.23 E-value=1.1 Score=37.65 Aligned_cols=112 Identities=20% Similarity=0.175 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHhhhhCCCccccccccccHHH
Q 009469 340 SGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKRHILGGSISKEAVSVIPWKL 419 (534)
Q Consensus 340 ~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (534)
....++..++.++.+.+.+++|.|..+.....+..+..+..... +
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-~---------------------------------- 49 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-S---------------------------------- 49 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-c----------------------------------
Confidence 34567888888899999999998887765554444333322211 0
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 420 ILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLK--FNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 420 ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g--~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
..+...+..++...+..........+..+... ......+.......++..++..+.+++.|..+.+.
T Consensus 50 -----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 118 (141)
T TIGR00880 50 -----NITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRA 118 (141)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHH
Confidence 01122222222222322222333333333221 12234556666777888888888899988777554
No 278
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.75 E-value=0.011 Score=56.10 Aligned_cols=65 Identities=8% Similarity=0.190 Sum_probs=47.6
Q ss_pred ccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHH
Q 009469 415 IPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANM 479 (534)
Q Consensus 415 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i 479 (534)
.+|..-+++-.+....+...+.-.....-..|++.|..+.++++...-+++-++.++.......+
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 35666677778888888888888888888889999988877777666666666666655544443
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.49 E-value=0.021 Score=61.67 Aligned_cols=147 Identities=16% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHHH-HHHHHHHHHHHHHhhhC--CchHHHHHHHHHHHHHHH
Q 009469 213 FSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFFW-GYLLTQIVGGIWADKFG--GKPVLGFGVIWWSVATVL 288 (534)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~l-~~~~~~~~~G~l~Dr~G--rr~~l~~g~~~~~i~~~l 288 (534)
.++..........+..+.|. ++.+|+.++.+.+++.++..+ +.++|.+++|++..|+. .|..+.+..+...+..++
T Consensus 311 ~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~ 390 (539)
T PF03137_consen 311 ILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVIL 390 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 33344444555556666665 577899999999988766655 66788999999999985 344433333322222221
Q ss_pred ------Hhh-----h---ccC--------------------------------------ChHHHHHHHHHHhhcccchhh
Q 009469 289 ------TPV-----A---ARI--------------------------------------GLPFLLIMRAFMGIGEGVAMP 316 (534)
Q Consensus 289 ------~~~-----~---~~~--------------------------------------~~~~ll~~r~l~Gig~g~~~~ 316 (534)
..+ + ..+ .+..+++..++.-+..+...+
T Consensus 391 ~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~ 470 (539)
T PF03137_consen 391 YSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQV 470 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhccc
Confidence 000 0 000 123344444454455555566
Q ss_pred HHHHHHhhhccCCcchhHHHHHHH-HHHHHHHHHHHHHHHhhcc
Q 009469 317 AMNNMLSKWIPVSERSRSLAFVYS-GMYLGSVTGLAVSPILIQK 359 (534)
Q Consensus 317 ~~~~~i~~~~~~~~rg~~~gi~~~-~~~lG~~igp~i~~~l~~~ 359 (534)
+...++-+.+|+++|..|+|+... ...+|.+-||++.|.++|.
T Consensus 471 p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 471 PSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------
T ss_pred chheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 666777788999999999999776 4557889999999999885
No 280
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=92.33 E-value=0.76 Score=44.35 Aligned_cols=55 Identities=9% Similarity=0.099 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSIT 495 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~ 495 (534)
..|.+..|-|.. ++.+|++..+...+.....++..+| ++.|.+.|++|.+..+..
T Consensus 17 t~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~i 71 (250)
T PF06813_consen 17 TTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLI 71 (250)
T ss_pred cccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHH
Confidence 445566665554 4568999999999999999998875 889999999998865443
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.09 E-value=4 Score=42.27 Aligned_cols=99 Identities=8% Similarity=-0.027 Sum_probs=71.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHH--HHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhH
Q 009469 240 NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGV--IWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPA 317 (534)
Q Consensus 240 s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~--~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~ 317 (534)
...--|.+-++..+...++.+..|++-.++.+-.-+.++. ++.+...++++..+ +.+...++-++.+.......+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~--~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTG--NIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344588888888999999999999977776644444333 33344445555555 8888888888888777778888
Q ss_pred HHHHHhhhccCCcchhHHHHHHH
Q 009469 318 MNNMLSKWIPVSERSRSLAFVYS 340 (534)
Q Consensus 318 ~~~~i~~~~~~~~rg~~~gi~~~ 340 (534)
+..-++.....+.-|..+|+...
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHH
Confidence 88888888877777888777554
No 282
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.01 E-value=0.055 Score=54.23 Aligned_cols=109 Identities=12% Similarity=0.051 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHHHHHHHHHHhhhc---c--------CChHHHHHHHHHHhhcccc
Q 009469 246 LIQSSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWWSVATVLTPVAA---R--------IGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 246 ~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~~~i~~~l~~~~~---~--------~~~~~ll~~r~l~Gig~g~ 313 (534)
.++.++.++-.+|..+.++.-=+ ..+|+++ +..+.-.+...++.++. . .+-+.+++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35667888888888877664211 1244443 33333222222222221 0 1234566778889999999
Q ss_pred hhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 009469 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPI 355 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~ 355 (534)
..+..+.+..+..++++|..+-.+......+|-.+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 989999999999999999888888777777787777766543
No 283
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.32 E-value=18 Score=38.50 Aligned_cols=74 Identities=19% Similarity=0.125 Sum_probs=56.7
Q ss_pred HHHHHhhcccchhhHHHHHHhhhcc-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Q 009469 303 MRAFMGIGEGVAMPAMNNMLSKWIP-VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIW 376 (534)
Q Consensus 303 ~r~l~Gig~g~~~~~~~~~i~~~~~-~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~ 376 (534)
.-++.|+.........-..+.+.+| +++|...+|-+....++..++..++++.+.+++||.....+.-++.++.
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3345567767777777788888887 4578899999988888888777778899999999998877666555553
No 284
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.71 E-value=20 Score=36.12 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=84.3
Q ss_pred HHHHhhh-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCc-hH---HHHHHHHH---HHHHHHHhhhccCChHHHHH
Q 009469 231 LPMSKEF-NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGK-PV---LGFGVIWW---SVATVLTPVAARIGLPFLLI 302 (534)
Q Consensus 231 ~~~~~~~-g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr-~~---l~~g~~~~---~i~~~l~~~~~~~~~~~ll~ 302 (534)
..+...+ |-+.-+.+++.+.|.....+|+...-++.|.--.- .+ +++|.+.- .+..+.+++-...+-+.+.+
T Consensus 31 ~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~ 110 (508)
T COG4262 31 GTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYA 110 (508)
T ss_pred HHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHH
Confidence 3344433 66777889999999999999999888877643222 21 12222221 11122222222224566778
Q ss_pred HHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhh-cccCchHHHHHHHHHHHHHHHHHH
Q 009469 303 MRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILI-QKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 303 ~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~-~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
.-++.|.-.|.-.|..+.++..-. .+-....+.....-.+|.+.+.++-.++. ...|..-.-...+++.++..++.+
T Consensus 111 lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~ 188 (508)
T COG4262 111 LTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTL 188 (508)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 888889888998999998887722 11222223333346677776666655543 444543333345555554444333
Q ss_pred H
Q 009469 382 K 382 (534)
Q Consensus 382 ~ 382 (534)
+
T Consensus 189 f 189 (508)
T COG4262 189 F 189 (508)
T ss_pred H
Confidence 3
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.58 E-value=1.7 Score=42.78 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhh
Q 009469 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 324 (534)
Q Consensus 245 g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 324 (534)
|.+.-.-.+...+..+....+.||+..-.=..+..++.+.+.++.+++. +.++-+.+-.+..++.|..-..-.++-+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss- 141 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS- 141 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc-
Confidence 4444455556666677777788887655445556677788888888888 7788888888888888776554444433
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc--cCchHHHHHHHHHHHHHHHHHHHhhcCC
Q 009469 325 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQK--FGWPSVFYSFGSLGSIWFALWLKKAYSS 387 (534)
Q Consensus 325 ~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~--~gw~~~f~i~~~~~~i~~i~~~~~~~~~ 387 (534)
.+++ ...+.+..+.+.++++|..--.++.+. +.-+.+.++...+.++.....++..+.+
T Consensus 142 ~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 142 RYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred cCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 3322 345566677777777777666666553 4467778777777766666666655544
No 286
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=87.38 E-value=56 Score=36.88 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHHHHHH
Q 009469 341 GMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 373 (534)
Q Consensus 341 ~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~ 373 (534)
+..++.++..+++.+++..++|..++.+.++++
T Consensus 109 ~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 109 VMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 344455555555555545567777776665554
No 287
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=85.51 E-value=3.7 Score=42.78 Aligned_cols=115 Identities=17% Similarity=0.050 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhh
Q 009469 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 324 (534)
Q Consensus 245 g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 324 (534)
.|-..++.+...+.+....++.+|+|-|+.+..+...+.++..+.++.+ +.......+-..|+-.+.....-...++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 4556677888889999999999999988887777776777777777666 55666667777775555444444444443
Q ss_pred hccCC-----------------------cchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 325 WIPVS-----------------------ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 325 ~~~~~-----------------------~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
+.-.+ .+|...|+.+....+-.++..+..|.+.+.+|
T Consensus 413 y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 413 YAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred HHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 33111 23555666677777777776666677666654
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=83.24 E-value=15 Score=37.03 Aligned_cols=96 Identities=7% Similarity=-0.088 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhh
Q 009469 245 GLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSK 324 (534)
Q Consensus 245 g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~ 324 (534)
|..-++..+..+++.+..|.+--.+.|..-++++..-...+.+++.++.+.+.|...++-++.+.-.....+.+..-++.
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45666677777888899999977776654444333333334444444444477777777777776667777788888888
Q ss_pred hccCCcchhHHHHHHH
Q 009469 325 WIPVSERSRSLAFVYS 340 (534)
Q Consensus 325 ~~~~~~rg~~~gi~~~ 340 (534)
-...+.-|..+|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 8877777888877554
No 289
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=82.44 E-value=81 Score=34.51 Aligned_cols=30 Identities=23% Similarity=0.109 Sum_probs=17.1
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 458 NLTESGLFCVLPWLTMAVFANMGGWIADTL 487 (534)
Q Consensus 458 s~~~~g~l~~~~~~~~iig~~i~g~l~dr~ 487 (534)
+....++++..++++..+--++.+....++
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455556666666666655555555544444
No 290
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=82.12 E-value=11 Score=39.89 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=48.1
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
+++.-++..+.....+.+..+.-+++.+|.-=|+.|.+.+...++|+---..+.-++++.+.++
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 3445566667777888999999999999999999999999999988765444444455544433
No 291
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=81.78 E-value=45 Score=31.04 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=25.1
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHH
Q 009469 324 KWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (534)
Q Consensus 324 ~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~ 374 (534)
+++..+++.+.-.......-++-.+|.++++.+.+..+. +..++.+++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~ 202 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGF-WALLLPALLLL 202 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 333334433333444445555566666666667666664 34444443333
No 292
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=81.07 E-value=54 Score=31.50 Aligned_cols=24 Identities=21% Similarity=0.092 Sum_probs=14.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhh
Q 009469 361 GWPSVFYSFGSLGSIWFALWLKKA 384 (534)
Q Consensus 361 gw~~~f~i~~~~~~i~~i~~~~~~ 384 (534)
.-+|++++.+++.++..+-.+..-
T Consensus 128 pr~~T~~~~t~LF~iFGlkmL~eg 151 (294)
T KOG2881|consen 128 PRKYTYYLATALFLIFGLKMLKEG 151 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667766666666555554443
No 293
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=79.84 E-value=3.9 Score=45.39 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hcccchH
Q 009469 439 GTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTL-VSKGLSI 494 (534)
Q Consensus 439 ~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~-g~r~~~i 494 (534)
+++++...+..|+.+.+|++...+..++..+....-+..+++|+++|++ |+++.+.
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl 58 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTIL 58 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3456667777888888899999999888888888889999999999975 7776544
No 294
>PRK10263 DNA translocase FtsK; Provisional
Probab=78.90 E-value=14 Score=43.50 Aligned_cols=23 Identities=22% Similarity=0.102 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHhhcccCchHHH
Q 009469 344 LGSVTGLAVSPILIQKFGWPSVF 366 (534)
Q Consensus 344 lG~~igp~i~~~l~~~~gw~~~f 366 (534)
.|+++|.+++.++...+|....+
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~ 164 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGT 164 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHH
Confidence 35566666655555555543333
No 295
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=78.27 E-value=4.3 Score=40.09 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 279 VIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPIL 356 (534)
Q Consensus 279 ~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l 356 (534)
.+++.+.-.+..+.+ +++..++.-+.-|+-.|..++...--+.+-.++++|-.+|+.....-.+|..++.+++-.+
T Consensus 326 Nl~ff~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTP--SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 334444445556666 6777777778889888888888888888878899999999999988888888777665443
No 296
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=77.50 E-value=19 Score=38.87 Aligned_cols=28 Identities=14% Similarity=0.047 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 465 FCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 465 l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
+...+.+.+.+++..++++...++.++.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 3445556666666666677776765543
No 297
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=76.71 E-value=8.5 Score=39.69 Aligned_cols=108 Identities=14% Similarity=0.077 Sum_probs=68.1
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc-------CChHHHHHHHHHHhhcccchh
Q 009469 244 VGLIQSS-FFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR-------IGLPFLLIMRAFMGIGEGVAM 315 (534)
Q Consensus 244 ~g~i~s~-~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~-------~~~~~ll~~r~l~Gig~g~~~ 315 (534)
.-++..+ +.+...+|.+.+.++-+. .+|.+.+..++-.+..-++.+++. .+-+.+++...+.|+..|=..
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 3344555 777777776665555443 233333444444444433333321 134567788889999999888
Q ss_pred hHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 009469 316 PAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS 353 (534)
Q Consensus 316 ~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~ 353 (534)
...+.+..+-.|++++-.+-.+.......|.++|..++
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 88888999999888887776666666666666666554
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=74.88 E-value=13 Score=35.95 Aligned_cols=100 Identities=18% Similarity=0.382 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hCCchHHH----HHHHHHHHHHHHHh-hhcc--CChHHHHHHHHHHhhcccchhh
Q 009469 245 GLIQSSFFWGYLLTQIVGGIWADK-FGGKPVLG----FGVIWWSVATVLTP-VAAR--IGLPFLLIMRAFMGIGEGVAMP 316 (534)
Q Consensus 245 g~i~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~----~g~~~~~i~~~l~~-~~~~--~~~~~ll~~r~l~Gig~g~~~~ 316 (534)
....-++..+..+|....|++... +.||+.+. .+++++++..++.+ ...+ .+...+++..++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344455666667777777888764 45555433 33444444444421 2221 1356678888888876544444
Q ss_pred HHHHHHhhh--ccCCcchhHHHHHHHHHHH
Q 009469 317 AMNNMLSKW--IPVSERSRSLAFVYSGMYL 344 (534)
Q Consensus 317 ~~~~~i~~~--~~~~~rg~~~gi~~~~~~l 344 (534)
+...+--|+ ..|++-|..+|+.-....+
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHH
Confidence 443333332 2344445555554443333
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=72.31 E-value=75 Score=32.64 Aligned_cols=166 Identities=9% Similarity=0.079 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHHHHhhhCC-CcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHH------
Q 009469 210 LLCFSAFLLCNMDRVNMSIAILPMSKEFNW-NSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWW------ 282 (534)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~------ 282 (534)
+.+.++++......-++......+..+++- |...+..-..+-.....+..++.|...|+..|+|++....++-
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 344556666666666677777766666643 4444444444555566777888899999999999877654432
Q ss_pred HHHHHHHhhhcc----CChHHHHHHHHHHhhcccc--hhhHHHHH--Hhhhc----cCCcchhHH---HHHHHHHHHHHH
Q 009469 283 SVATVLTPVAAR----IGLPFLLIMRAFMGIGEGV--AMPAMNNM--LSKWI----PVSERSRSL---AFVYSGMYLGSV 347 (534)
Q Consensus 283 ~i~~~l~~~~~~----~~~~~ll~~r~l~Gig~g~--~~~~~~~~--i~~~~----~~~~rg~~~---gi~~~~~~lG~~ 347 (534)
+.+.++..+... .+++.+..+-++.-...+. ....+..+ --||. ..+.+.... +.....-..-.+
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 222233333332 2344455554443322111 11111111 11222 122233333 333444455667
Q ss_pred HHHHHHHHhhcccCchHHHHHHHHHHHH
Q 009469 348 TGLAVSPILIQKFGWPSVFYSFGSLGSI 375 (534)
Q Consensus 348 igp~i~~~l~~~~gw~~~f~i~~~~~~i 375 (534)
+.|++.|.+++..+-|..-.++++..++
T Consensus 190 Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhcccceeechhhhhhhhHHHHHH
Confidence 8899999998888777765555555544
No 300
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=71.78 E-value=99 Score=29.87 Aligned_cols=25 Identities=8% Similarity=-0.302 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 430 IISHFCHNWGTFILLTWMPTYYNQV 454 (534)
Q Consensus 430 ~l~~~~~~~~~~~~~~~lp~~~~~~ 454 (534)
.+...+.....++....=..|+++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333444445555555555566664
No 301
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=70.53 E-value=1.4 Score=44.09 Aligned_cols=21 Identities=14% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 009469 464 LFCVLPWLTMAVFANMGGWIA 484 (534)
Q Consensus 464 ~l~~~~~~~~iig~~i~g~l~ 484 (534)
.++..++++-.+|+.+.++..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~ 206 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPR 206 (309)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHHHhcchhcceeE
Confidence 456678899999999988753
No 302
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=70.27 E-value=1.1e+02 Score=30.31 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=26.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHH
Q 009469 330 ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (534)
Q Consensus 330 ~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~ 372 (534)
.....-++.....-.-+-+|-++++.++..+||.|.=-+.+++
T Consensus 152 ~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~Dpi~si~ 194 (296)
T COG1230 152 NLNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWLDPILSIV 194 (296)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchHHHHH
Confidence 3444555556655555556777777778888998854444433
No 303
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=69.76 E-value=1.6e+02 Score=31.51 Aligned_cols=76 Identities=16% Similarity=0.119 Sum_probs=54.6
Q ss_pred HHHHHhhcccchhhHHHHHHhhhccC-CcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Q 009469 303 MRAFMGIGEGVAMPAMNNMLSKWIPV-SERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFA 378 (534)
Q Consensus 303 ~r~l~Gig~g~~~~~~~~~i~~~~~~-~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i 378 (534)
.-+..|+.........-..+.+.+|. +++...+|-+....++-.++-.++++.+..++||+....+.-++.++..+
T Consensus 288 lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 288 LVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 33445666666777777778888874 45677888888877777777778889999999999887765444444433
No 304
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=69.50 E-value=55 Score=29.05 Aligned_cols=32 Identities=13% Similarity=-0.053 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 461 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 461 ~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
....-.++......+..++.+.+.+++|.|..
T Consensus 38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~s 69 (156)
T PF05978_consen 38 LGYYSLAILYGSFAISCLFAPSIVNKLGPKWS 69 (156)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHH
Confidence 33344566667778888888999999999853
No 305
>PRK15015 carbon starvation protein A; Provisional
Probab=64.23 E-value=1.6e+02 Score=32.47 Aligned_cols=40 Identities=10% Similarity=0.321 Sum_probs=22.2
Q ss_pred hhccCCcchhHHHH-HHHHHHHHHHHHHHHHHHhhcccCch-HHHHH
Q 009469 324 KWIPVSERSRSLAF-VYSGMYLGSVTGLAVSPILIQKFGWP-SVFYS 368 (534)
Q Consensus 324 ~~~~~~~rg~~~gi-~~~~~~lG~~igp~i~~~l~~~~gw~-~~f~i 368 (534)
|+.|.+ |-..+|- +.+..+.|+++||.++. .+||- ...|+
T Consensus 79 DYvPt~-k~VLfGHHFasIAGAGPivGPvlAa----~~GwlP~~LWI 120 (701)
T PRK15015 79 DYVPTD-KKVLFGHHFAAIAGAGPLVGPVLAA----QMGYLPGMIWL 120 (701)
T ss_pred CcCcCC-ccchhHHHHHHHhccCccHHHHHHH----HHcchHHHHHH
Confidence 555444 4455555 33455666777776655 46775 33443
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.89 E-value=32 Score=28.13 Aligned_cols=29 Identities=28% Similarity=0.143 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHhhh-CCchHHHHHH
Q 009469 251 FFWGYLLTQIVGGIWADKF-GGKPVLGFGV 279 (534)
Q Consensus 251 ~~l~~~~~~~~~G~l~Dr~-Grr~~l~~g~ 279 (534)
-+++..+.....||+.||| |.++..++..
T Consensus 51 efIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 51 EFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3444555566679999986 5555444333
No 307
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=62.80 E-value=97 Score=35.61 Aligned_cols=50 Identities=10% Similarity=0.091 Sum_probs=30.4
Q ss_pred hHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHH
Q 009469 224 VNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVL 275 (534)
Q Consensus 224 ~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l 275 (534)
+.+......+...+|++...+|+.+.+. +..+.-++....+-|-|.-.+.
T Consensus 950 yilV~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMA 999 (1096)
T TIGR00927 950 YLMVWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMA 999 (1096)
T ss_pred HHHHHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCcce
Confidence 3344455667788889888887655433 5555555555555565654443
No 308
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=56.64 E-value=1.6e+02 Score=26.90 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=32.6
Q ss_pred chhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHH
Q 009469 313 VAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGS 374 (534)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~ 374 (534)
.-.....+.+.+..|+++|.++.-+--.+..+--.+.-.++.++.+. |+|..++.|+..+
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~Ll 71 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLFLL 71 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 34455667777778887665554332233334444555566666654 3555555444433
No 309
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=56.53 E-value=67 Score=30.25 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCh--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 009469 438 WGTFILLTWMPTYYNQVLKFNL--TESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSI 494 (534)
Q Consensus 438 ~~~~~~~~~lp~~~~~~~g~s~--~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i 494 (534)
..........+.+..+ .+.+. ...++......+...++.++.|.+.||+|+|+...
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 73 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLI 73 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHH
Confidence 3334444455666665 34444 46788888888888988899999999998885433
No 310
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=56.16 E-value=2.4e+02 Score=28.77 Aligned_cols=12 Identities=17% Similarity=0.224 Sum_probs=9.7
Q ss_pred ChHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFM 307 (534)
Q Consensus 296 ~~~~ll~~r~l~ 307 (534)
.+|.|++.|++.
T Consensus 204 ayWLFYiVri~~ 215 (531)
T KOG3814|consen 204 AYWLFYIVRILD 215 (531)
T ss_pred HHHHHHhhhhhc
Confidence 578888888876
No 311
>COG1288 Predicted membrane protein [Function unknown]
Probab=55.30 E-value=2.7e+02 Score=29.16 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=23.9
Q ss_pred HHHHHHHHHHH-hhcccCchHHHHHHHHHHHHHHHHHHHh
Q 009469 345 GSVTGLAVSPI-LIQKFGWPSVFYSFGSLGSIWFALWLKK 383 (534)
Q Consensus 345 G~~igp~i~~~-l~~~~gw~~~f~i~~~~~~i~~i~~~~~ 383 (534)
+..++.-++|. +.+-.+||...|+...+..+..+.+...
T Consensus 200 ~~~IAq~iAGip~~sG~~~Riv~~v~~~~~~i~y~~~Ya~ 239 (481)
T COG1288 200 ATVIAQNIAGIPFLSGMGLRIVVWVVFTLISIIYVYWYAS 239 (481)
T ss_pred HHHHHhhhcCCcccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444433 3455689999988887777666655543
No 312
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=55.26 E-value=17 Score=40.46 Aligned_cols=71 Identities=13% Similarity=0.198 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhhhHHHHhHHH-HHhhhCCCcchhHHHHHHHH-HHHHHHHHHHHHHHhhhC--CchHHHHHHHH
Q 009469 211 LCFSAFLLCNMDRVNMSIAILP-MSKEFNWNSTTVGLIQSSFF-WGYLLTQIVGGIWADKFG--GKPVLGFGVIW 281 (534)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~i~s~~~-l~~~~~~~~~G~l~Dr~G--rr~~l~~g~~~ 281 (534)
+..++..+.......+..++|. +.++||.++..+..+.+... .+.++|.+++|++..|+- .|....+.++.
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~ 470 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC 470 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence 3444444555555556667776 57789999999998775554 466788889999999875 34444443333
No 313
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.25 E-value=51 Score=27.00 Aligned_cols=55 Identities=25% Similarity=0.130 Sum_probs=33.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc-C-chHHHHHHHHHHHHHHHHHHH
Q 009469 328 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF-G-WPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 328 ~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~-g-w~~~f~i~~~~~~i~~i~~~~ 382 (534)
++.++.+.++--+.-.+++++-.+..|++++++ | -+|-++++.++.+...++.+.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 345677777766666777766666677777765 2 455555555555555554443
No 314
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=54.02 E-value=22 Score=33.51 Aligned_cols=52 Identities=33% Similarity=0.417 Sum_probs=36.3
Q ss_pred HHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 009469 301 LIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVS 353 (534)
Q Consensus 301 l~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~ 353 (534)
...-.-.|+|.+.+++++.+-+.+.+| +......++..+..-+..+.|-.+.
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556799999999999999999995 5556666666555555555554443
No 315
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=51.98 E-value=1.8e+02 Score=31.82 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=56.0
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF 360 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~ 360 (534)
+...++-.-++.|++.........-+.-+-+|++-|..+++++....++|..+..++........
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667788899999999988888888889999999999999999999999999998887665433
No 316
>PRK11588 hypothetical protein; Provisional
Probab=51.92 E-value=3.3e+02 Score=29.21 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=16.5
Q ss_pred HHHHHhhhCCchHH--HHHHHHHHHHHHHHhhhc
Q 009469 262 GGIWADKFGGKPVL--GFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 262 ~G~l~Dr~Grr~~l--~~g~~~~~i~~~l~~~~~ 293 (534)
.+++.+|++.|..+ .+-+++++++...++++.
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~E 169 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGE 169 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhH
Confidence 36677788766433 333444444444444443
No 317
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=49.77 E-value=3e+02 Score=28.13 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=21.6
Q ss_pred hhccCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhcccCch
Q 009469 324 KWIPVSERSRSLAFV-YSGMYLGSVTGLAVSPILIQKFGWP 363 (534)
Q Consensus 324 ~~~~~~~rg~~~gi~-~~~~~lG~~igp~i~~~l~~~~gw~ 363 (534)
|+. |.+|-..++.. ....+.|+++||.++ ..+||-
T Consensus 48 DYv-P~~~~vlfghhf~sIAGaGPI~GPi~a----a~~Gwl 83 (376)
T PF02554_consen 48 DYV-PTNKWVLFGHHFASIAGAGPIVGPILA----AQFGWL 83 (376)
T ss_pred CCC-CCchHHhhHHHHHHHhccccchHHHHH----HHhcch
Confidence 455 44556777763 345666777777766 346776
No 318
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=48.66 E-value=1.4e+02 Score=30.69 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=54.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 009469 423 KAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITA 496 (534)
Q Consensus 423 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~ 496 (534)
.+....+.+++++..++--...+....|+....|-+....+....+-.+..++...+.|-..|+..|.|.+...
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 34456677788888888888888888888886665666666656666666777777788888999888866543
No 319
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=48.45 E-value=3.4e+02 Score=28.34 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=16.0
Q ss_pred ccchhhHHHHHHhhhccCCcchhHHH
Q 009469 311 EGVAMPAMNNMLSKWIPVSERSRSLA 336 (534)
Q Consensus 311 ~g~~~~~~~~~i~~~~~~~~rg~~~g 336 (534)
.+..+.+..++.++.++...-.+.++
T Consensus 175 tg~~~~avaalf~qL~~~a~~t~g~~ 200 (536)
T COG3559 175 TGMVFTAVAALFAQLSPSARFTRGVA 200 (536)
T ss_pred HHHHHHHHHHHHHHhCccccccchhH
Confidence 34556777788888886554333333
No 320
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=47.74 E-value=2.9e+02 Score=27.24 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=15.6
Q ss_pred HHHHHHHHhhcccchh-hHHHHHHhhhccCCc
Q 009469 300 LLIMRAFMGIGEGVAM-PAMNNMLSKWIPVSE 330 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~-~~~~~~i~~~~~~~~ 330 (534)
-.+..++.+++.|.+. .+..-++.+.+..++
T Consensus 263 ~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 263 DIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4455566676666543 333335555554333
No 321
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=47.42 E-value=1.8e+02 Score=27.28 Aligned_cols=26 Identities=15% Similarity=0.050 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Q 009469 466 CVLPWLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 466 ~~~~~~~~iig~~i~g~l~dr~g~r~ 491 (534)
......+.++|..++.++.+|+.++.
T Consensus 199 ~~~~~~~~~~G~~lG~~~~~~i~~~~ 224 (240)
T PF01925_consen 199 SLILLPGAFLGAFLGAKLARKIPQKV 224 (240)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 34455667777777888888876554
No 322
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=47.36 E-value=97 Score=27.81 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=32.7
Q ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc------CchHHHHHHHHHHHHHHHHHHH
Q 009469 325 WIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKF------GWPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 325 ~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~------gw~~~f~i~~~~~~i~~i~~~~ 382 (534)
.++..++.+..+.+.++.-.+...--++=+.+.... .+...+++.+++..+.+++.-.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 344555556666555544444444444444444332 4677788888887776665543
No 323
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=46.04 E-value=67 Score=29.55 Aligned_cols=30 Identities=3% Similarity=-0.222 Sum_probs=14.1
Q ss_pred HHHHHHhhcccCchHHHHHHHHHHHHHHHH
Q 009469 350 LAVSPILIQKFGWPSVFYSFGSLGSIWFAL 379 (534)
Q Consensus 350 p~i~~~l~~~~gw~~~f~i~~~~~~i~~i~ 379 (534)
.++++.......-.|....+|.+.+...+-
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~ 72 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIK 72 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 333333333444455545555555555443
No 324
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=46.00 E-value=3.4e+02 Score=28.57 Aligned_cols=47 Identities=11% Similarity=0.050 Sum_probs=25.3
Q ss_pred hhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 009469 223 RVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGG 271 (534)
Q Consensus 223 ~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr 271 (534)
.+.+......+-+.+|++....|+..- ..|..+--++...+.-|-|.
T Consensus 440 SYLMVWwa~~iGeT~gIp~eIMGLTiL--AAGTSIPDlitSvIVARKGl 486 (588)
T KOG1307|consen 440 SYLMVWWANIIGETLGIPDEIMGLTIL--AAGTSIPDLITSVIVARKGL 486 (588)
T ss_pred HHHHHHHHHHcccccCCCHHHhhhhhh--hcCCchHHhhHhhhhccccc
Confidence 344455556677788888877776432 22333333444444445443
No 325
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=44.97 E-value=98 Score=30.37 Aligned_cols=15 Identities=13% Similarity=0.394 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHhhh
Q 009469 278 GVIWWSVATVLTPVA 292 (534)
Q Consensus 278 g~~~~~i~~~l~~~~ 292 (534)
+.++++++.++..+.
T Consensus 5 ~~~~~~~~s~~~~l~ 19 (284)
T PF12805_consen 5 TLLCFALASLLVGLL 19 (284)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333343333333333
No 326
>PRK10263 DNA translocase FtsK; Provisional
Probab=44.94 E-value=1.6e+02 Score=35.27 Aligned_cols=22 Identities=14% Similarity=-0.059 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 009469 470 WLTMAVFANMGGWIADTLVSKG 491 (534)
Q Consensus 470 ~~~~iig~~i~g~l~dr~g~r~ 491 (534)
..|+++|.++...+...+|...
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vG 162 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSG 162 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHH
Confidence 4688888888888888887654
No 327
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=44.00 E-value=4.1e+02 Score=28.01 Aligned_cols=41 Identities=12% Similarity=-0.025 Sum_probs=25.5
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHH
Q 009469 327 PVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSL 372 (534)
Q Consensus 327 ~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~ 372 (534)
.+.+.+-..+++..+.+.|.+.-|+..+. +|-|...+..++
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll 58 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVL 58 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHH
Confidence 35566777778777777777777776654 344444444333
No 328
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=43.80 E-value=2.5e+02 Score=27.62 Aligned_cols=61 Identities=11% Similarity=0.154 Sum_probs=33.1
Q ss_pred HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 009469 300 LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGW 362 (534)
Q Consensus 300 ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw 362 (534)
.-..|.+.|+-. ..+.+.++++.-.||++++--..--.....++..++-|++ |++.+...|
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~-g~~l~~~~~ 82 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLI-GLLLNYTPW 82 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHhccC
Confidence 345677777654 3457788999999986544322222223333334444544 444444434
No 329
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=43.54 E-value=56 Score=28.81 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVT 348 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~i 348 (534)
++..+++...+.|+| .....+.+++--+++++-|..+|+-..-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345555555555554 34567888888888988999999988877776653
No 330
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=43.06 E-value=3.2e+02 Score=26.44 Aligned_cols=63 Identities=21% Similarity=0.258 Sum_probs=35.0
Q ss_pred hcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHH
Q 009469 309 IGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLG 373 (534)
Q Consensus 309 ig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~ 373 (534)
.-.|.-.....+++.+.+|+++|-++.=+=-.+..+--.+.-..+.++.+. |.+.+.+++...
T Consensus 28 ~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l--~~~l~~~fg~~L 90 (254)
T COG0861 28 IVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL--TQPLLYIFGLYL 90 (254)
T ss_pred HHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHH
Confidence 344566778889999999988776655332222222233333444455543 555666544433
No 331
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=42.87 E-value=1.4e+02 Score=30.84 Aligned_cols=135 Identities=13% Similarity=0.051 Sum_probs=79.8
Q ss_pred hHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchH--------HHHHHHHH-HHHHHHHhhhcc-----
Q 009469 229 AILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPV--------LGFGVIWW-SVATVLTPVAAR----- 294 (534)
Q Consensus 229 ~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~--------l~~g~~~~-~i~~~l~~~~~~----- 294 (534)
..+.-.-|.|++..+.+++.-...-..++.+...|.++. |.|++ +-+..... ++..........
T Consensus 287 ~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta--~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~ 364 (510)
T KOG3574|consen 287 LTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTA--GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTF 364 (510)
T ss_pred ccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecC--CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCce
Confidence 344445678999988887663333333444444444433 22222 11111111 111111111110
Q ss_pred -CChHH-HHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHH
Q 009469 295 -IGLPF-LLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSV 365 (534)
Q Consensus 295 -~~~~~-ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~ 365 (534)
..+.. .+....+.+...-..+...++..+++.+|.--|+.|.+.+...++|+---..+...+.+.++|.-.
T Consensus 365 ~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 365 PRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred eechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 11222 233345556666667788899999999999999999999999999988777777888887776643
No 332
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=42.85 E-value=55 Score=26.79 Aligned_cols=53 Identities=11% Similarity=0.105 Sum_probs=43.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 241 STTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 241 ~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
+...|=+.+.|.-.+++.++++++..|+.-+-+.=.+|..+..++..++.+.+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 35668889999999999999999999999888877778877777776655543
No 333
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=42.80 E-value=3.4e+02 Score=26.73 Aligned_cols=54 Identities=19% Similarity=0.391 Sum_probs=31.9
Q ss_pred HHHHhhcccchhhHHHHHHhhhcc---CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 009469 304 RAFMGIGEGVAMPAMNNMLSKWIP---VSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFG 361 (534)
Q Consensus 304 r~l~Gig~g~~~~~~~~~i~~~~~---~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~g 361 (534)
..++.+..+.+ +..+--|.| |+.-+.-.|+..+...++.++|.-+..-+..+-.
T Consensus 254 G~iqsLFE~sm----ytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~ 310 (454)
T KOG4332|consen 254 GAIQSLFEGSM----YTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSS 310 (454)
T ss_pred HHHHHHHhhhh----heeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCC
Confidence 44555555544 444444444 3445566677777777777888777766665543
No 334
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=39.00 E-value=4.9e+02 Score=28.93 Aligned_cols=17 Identities=0% Similarity=-0.246 Sum_probs=7.7
Q ss_pred ccCchHHHHHHHHHHHH
Q 009469 359 KFGWPSVFYSFGSLGSI 375 (534)
Q Consensus 359 ~~gw~~~f~i~~~~~~i 375 (534)
..+|.+.......+.++
T Consensus 271 s~~~~~~~~~~~~v~~l 287 (700)
T COG1480 271 SVNILPLLGLLILVIFL 287 (700)
T ss_pred cccHHHHHHHHHHHHHH
Confidence 44565544444333333
No 335
>PRK02237 hypothetical protein; Provisional
Probab=38.47 E-value=90 Score=25.66 Aligned_cols=52 Identities=12% Similarity=-0.015 Sum_probs=41.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc
Q 009469 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA 293 (534)
Q Consensus 242 ~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~ 293 (534)
...|=+.+.|.-.+++.+++++++.|+.-+-+.=.+|..+..++..+..+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4478889999999999999999999999887777777777777776654443
No 336
>PRK03612 spermidine synthase; Provisional
Probab=38.25 E-value=5.5e+02 Score=27.76 Aligned_cols=32 Identities=9% Similarity=-0.115 Sum_probs=23.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH-HHHhhccc
Q 009469 460 TESGLFCVLPWLTMAVFANMGGWI-ADTLVSKG 491 (534)
Q Consensus 460 ~~~g~l~~~~~~~~iig~~i~g~l-~dr~g~r~ 491 (534)
...|.++....+|+++|.++.+++ ...+|-..
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~ 177 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLIR 177 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHH
Confidence 456778888888888888887765 45677554
No 337
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=36.99 E-value=3.8e+02 Score=25.62 Aligned_cols=24 Identities=25% Similarity=0.398 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Q 009469 333 RSLAFVYSGMYLGSVTGLAVSPIL 356 (534)
Q Consensus 333 ~~~gi~~~~~~lG~~igp~i~~~l 356 (534)
+.....-.+..+|+++|...+..-
T Consensus 10 ~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 10 RFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555666666666555444
No 338
>COG4769 Predicted membrane protein [Function unknown]
Probab=36.82 E-value=1.4e+02 Score=26.58 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhc
Q 009469 250 SFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIG 310 (534)
Q Consensus 250 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig 310 (534)
++.+...+.+.+.-++..++|+|.+-.+|.-. +-++.+ |..++++.+++.+-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~h--Nl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTH--NLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHH--hHHHHHHHHHHHhcc
Confidence 34445556666777888899988875544433 345666 888888888887643
No 339
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=36.70 E-value=1.4e+02 Score=20.54 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHH
Q 009469 344 LGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWLK 382 (534)
Q Consensus 344 lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~~ 382 (534)
+|+.+|..+.+.+....++.+.-++.+++.++.++..+.
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~~ 44 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIYR 44 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 344444444444333334455555666666555544443
No 340
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=35.55 E-value=4.9e+02 Score=26.45 Aligned_cols=20 Identities=15% Similarity=0.258 Sum_probs=10.9
Q ss_pred HHhhcchhHHHHHHHHHHHH
Q 009469 418 KLILSKAPVWALIISHFCHN 437 (534)
Q Consensus 418 ~~ll~~~~~~~~~l~~~~~~ 437 (534)
+..+++|.++...++..+..
T Consensus 239 ~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred HHHHhCcHHHHHHHHHHHHH
Confidence 34556666665555554433
No 341
>PRK10692 hypothetical protein; Provisional
Probab=34.17 E-value=77 Score=24.79 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=8.5
Q ss_pred ChHHHHHHHHHHhhccc
Q 009469 296 GLPFLLIMRAFMGIGEG 312 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g 312 (534)
+.+.+++-..+.|++.|
T Consensus 37 ~Lp~~~~~gal~~IFiG 53 (92)
T PRK10692 37 NLPQFFAHGALLSIFVG 53 (92)
T ss_pred CchHHHHhhHHHHHHHH
Confidence 44555555555555444
No 342
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=32.66 E-value=4.4e+02 Score=24.97 Aligned_cols=52 Identities=19% Similarity=0.139 Sum_probs=31.2
Q ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Q 009469 453 QVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFL 507 (534)
Q Consensus 453 ~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~~~~~~~~~~~~ 507 (534)
+..+.+..+.|..........+ +....+.+|.+.+.....+...++..+-++
T Consensus 124 ~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~GlyfL 175 (224)
T PF09930_consen 124 PSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGLYFL 175 (224)
T ss_pred HhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 3468888888876654444333 566777888886665555554444444333
No 343
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=32.39 E-value=4.1e+02 Score=24.59 Aligned_cols=26 Identities=19% Similarity=0.063 Sum_probs=12.3
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhc
Q 009469 360 FGWPSVFYSFGSLGSIWFALWLKKAY 385 (534)
Q Consensus 360 ~gw~~~f~i~~~~~~i~~i~~~~~~~ 385 (534)
.+.+...|+..++++++.++.+++.+
T Consensus 174 inp~l~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 174 INPVLPPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34343444444555555555554443
No 344
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=31.77 E-value=3.8e+02 Score=24.07 Aligned_cols=8 Identities=13% Similarity=0.152 Sum_probs=3.1
Q ss_pred HHHHHhhc
Q 009469 482 WIADTLVS 489 (534)
Q Consensus 482 ~l~dr~g~ 489 (534)
++.+|+..
T Consensus 159 ~~~~~~~~ 166 (191)
T PF01810_consen 159 RLRRKFSS 166 (191)
T ss_pred HHHHHHhh
Confidence 33344433
No 345
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=31.69 E-value=3e+02 Score=27.05 Aligned_cols=65 Identities=12% Similarity=0.070 Sum_probs=28.6
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhccc
Q 009469 418 KLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTM-AVFANMGGWIADTLVSKG 491 (534)
Q Consensus 418 ~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~-iig~~i~g~l~dr~g~r~ 491 (534)
+++.++|+.+............+.....|.+ + .| ...++++-+.+..+.+ ++|++ ++-+|+.|-.
T Consensus 63 ~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv----n-~g-~~leaSLGY~InPL~~VllG~l---flkErls~~Q 128 (293)
T COG2962 63 KQLLKQPKTLLMLALTALLIGLNWWLFIWAV----N-NG-HVLEASLGYFINPLVNVLLGRL---FLKERLSRLQ 128 (293)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHhheec----C-CC-chhHHHhHHHHHHHHHHHHHHH---HHHhhccHHH
Confidence 3356666655554444433333333333322 2 12 2334444333443333 34433 4567776654
No 346
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=31.39 E-value=1.7e+02 Score=25.59 Aligned_cols=25 Identities=16% Similarity=0.508 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCch
Q 009469 249 SSFFWGYLLTQIVGGIWADKFGGKP 273 (534)
Q Consensus 249 s~~~l~~~~~~~~~G~l~Dr~Grr~ 273 (534)
.-|.+++.+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4578888899999999999988764
No 347
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.98 E-value=6.5e+02 Score=26.46 Aligned_cols=75 Identities=12% Similarity=0.036 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhCCchH-----HHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcc
Q 009469 257 LTQIVGGIWADKFGGKPV-----LGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 331 (534)
Q Consensus 257 ~~~~~~G~l~Dr~Grr~~-----l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r 331 (534)
...+..=++.+.+.++++ +++|+.+...-.++.+++-+.++ ..+-++. .++.......|+.......+|
T Consensus 306 ~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F---~~AYliA---a~a~i~Li~~Y~~~vl~~~k~ 379 (430)
T PF06123_consen 306 GLTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIGF---NLAYLIA---ALACIGLISLYLSSVLKSWKR 379 (430)
T ss_pred HHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhch---HHHHHHH---HHHHHHHHHHHHHHHHhcchH
Confidence 333444456677776665 56677666666677777763333 2222222 223344556677777766677
Q ss_pred hhHHHH
Q 009469 332 SRSLAF 337 (534)
Q Consensus 332 g~~~gi 337 (534)
|..++.
T Consensus 380 ~~~~~~ 385 (430)
T PF06123_consen 380 GLIFAG 385 (430)
T ss_pred HHHHHH
Confidence 666544
No 348
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=30.95 E-value=4.1e+02 Score=27.22 Aligned_cols=13 Identities=15% Similarity=0.199 Sum_probs=9.3
Q ss_pred HhhhCCchHHHHH
Q 009469 266 ADKFGGKPVLGFG 278 (534)
Q Consensus 266 ~Dr~Grr~~l~~g 278 (534)
.||+--.|++.+.
T Consensus 208 ~e~ft~sKllav~ 220 (416)
T KOG2765|consen 208 VERFTLSKLLAVF 220 (416)
T ss_pred cchhhHHHHHHHH
Confidence 7888887776443
No 349
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=30.93 E-value=26 Score=30.02 Aligned_cols=15 Identities=13% Similarity=0.261 Sum_probs=7.0
Q ss_pred hHHHHHHHHHHHHHH
Q 009469 363 PSVFYSFGSLGSIWF 377 (534)
Q Consensus 363 ~~~f~i~~~~~~i~~ 377 (534)
||+++++.+++++++
T Consensus 1 RW~l~~iii~~i~l~ 15 (130)
T PF12273_consen 1 RWVLFAIIIVAILLF 15 (130)
T ss_pred CeeeHHHHHHHHHHH
Confidence 455554444443333
No 350
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=30.26 E-value=1.7e+02 Score=26.79 Aligned_cols=24 Identities=17% Similarity=0.529 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCC
Q 009469 248 QSSFFWGYLLTQIVGGIWADKFGG 271 (534)
Q Consensus 248 ~s~~~l~~~~~~~~~G~l~Dr~Gr 271 (534)
..-|.+++.++..+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 346788889999999999999885
No 351
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=29.98 E-value=6.8e+02 Score=26.40 Aligned_cols=52 Identities=19% Similarity=0.255 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHH
Q 009469 296 GLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAV 352 (534)
Q Consensus 296 ~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i 352 (534)
.+..+++.-++.|+..|....-....+.+ --|..++-......+|.++|-.+
T Consensus 24 pF~aLl~~al~~gl~~G~~~~~i~~~i~~-----GfG~tl~~igivI~lG~~iG~~l 75 (441)
T PF02447_consen 24 PFLALLIVALIVGLLAGMPPEEIVKSITK-----GFGSTLGSIGIVIALGAMIGKLL 75 (441)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677888888888877655444333333 33555666666666777766664
No 352
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=29.83 E-value=86 Score=24.38 Aligned_cols=19 Identities=37% Similarity=0.536 Sum_probs=10.4
Q ss_pred CChHHHHHHHHHHhhcccc
Q 009469 295 IGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 295 ~~~~~ll~~r~l~Gig~g~ 313 (534)
.+.+.+++-..+.|++.|+
T Consensus 36 L~Lp~~~~~gal~~IFiGA 54 (89)
T PF10762_consen 36 LGLPQFLAHGALFSIFIGA 54 (89)
T ss_pred CCCcHHHHhhHHHHHHHHH
Confidence 3455555555555555543
No 353
>PRK03818 putative transporter; Validated
Probab=28.82 E-value=3.8e+02 Score=29.25 Aligned_cols=89 Identities=11% Similarity=0.074 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh----ccCChHHHHHHHHHHhhcccchhhHH
Q 009469 243 TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA----ARIGLPFLLIMRAFMGIGEGVAMPAM 318 (534)
Q Consensus 243 ~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~----~~~~~~~ll~~r~l~Gig~g~~~~~~ 318 (534)
+.|+...++.+|...|+-+..-+.+..|.+..+ ++.++..+..++..+. -..++ ..++. .++.+...++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~G---~~aG~~t~tp~ 509 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNY--LTLCG---MLAGSMTDPPA 509 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCH--HHHHH---HHhccCCCcHH
Confidence 467777777777777777766665555665544 3444443333322222 11122 22222 24445556777
Q ss_pred HHHHhhh-ccCCcchhHHHH
Q 009469 319 NNMLSKW-IPVSERSRSLAF 337 (534)
Q Consensus 319 ~~~i~~~-~~~~~rg~~~gi 337 (534)
.+++.|. .+.+.-..+++.
T Consensus 510 l~~a~~~~~~~~~~~~gYa~ 529 (552)
T PRK03818 510 LAFANNLHPTSGAAALSYAT 529 (552)
T ss_pred HHHHhcccCCCCCcccchHH
Confidence 7888875 433333333333
No 354
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=27.59 E-value=3.7e+02 Score=30.32 Aligned_cols=49 Identities=14% Similarity=0.111 Sum_probs=27.6
Q ss_pred HHHHHHhh----hCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhc
Q 009469 261 VGGIWADK----FGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIG 310 (534)
Q Consensus 261 ~~G~l~Dr----~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig 310 (534)
+.+-++|. -||.+-++++.++++++.+...+.... .+.+..+-++.+++
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-p~lf~~~l~~~tf~ 94 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-PWLFAVGLTVSTFG 94 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHH
Confidence 33556664 345566777777777777776665422 33344444444444
No 355
>COG2119 Predicted membrane protein [Function unknown]
Probab=27.11 E-value=4.9e+02 Score=23.80 Aligned_cols=26 Identities=23% Similarity=0.156 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 467 VLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 467 ~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
....++++++.+.+.++++|+..|.+
T Consensus 141 lg~~l~s~laVl~G~~ia~ki~~r~l 166 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKLPERLL 166 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHH
Confidence 34456677777788888999988864
No 356
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.74 E-value=3e+02 Score=22.38 Aligned_cols=25 Identities=20% Similarity=0.438 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhh-hCCchHHHHHHHH
Q 009469 257 LTQIVGGIWADK-FGGKPVLGFGVIW 281 (534)
Q Consensus 257 ~~~~~~G~l~Dr-~Grr~~l~~g~~~ 281 (534)
+.+.+.|.+.|+ ++-++.+.+.+++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 444555666665 5655544443333
No 357
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=25.88 E-value=7.5e+02 Score=25.56 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=57.7
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccc
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGV 313 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~ 313 (534)
.+..|++..+...+.....+...++.++-.+-.-.+|.|..+..+.....+...... .....+...+..-++.|+-.-.
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~-~~~~~~~~~~ga~~v~Gii~il 98 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAI-GAGGGLGAIFGAVIVAGLFVIL 98 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHH
Confidence 345689988888888888888888888764333357777766655444333322222 2222566666666666654333
Q ss_pred hhhHHHHHHhhhccCCcch
Q 009469 314 AMPAMNNMLSKWIPVSERS 332 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~~rg 332 (534)
.. .....+.+.+|+.-.|
T Consensus 99 lg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 99 LA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HH-HHHHHHHHHCCcHHHH
Confidence 22 3555677888765433
No 358
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=25.79 E-value=5.3e+02 Score=23.77 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=23.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 328 VSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 328 ~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
.++.+++.++...+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4556788888777778888888888777654
No 359
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=25.18 E-value=4.9e+02 Score=27.68 Aligned_cols=11 Identities=9% Similarity=0.075 Sum_probs=9.0
Q ss_pred ChHHHHHHHHH
Q 009469 296 GLPFLLIMRAF 306 (534)
Q Consensus 296 ~~~~ll~~r~l 306 (534)
.||.|++.|++
T Consensus 180 syWLFY~vrIl 190 (505)
T PF06638_consen 180 SYWLFYGVRIL 190 (505)
T ss_pred HHHHHhhheee
Confidence 58888888887
No 360
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=25.03 E-value=8e+02 Score=25.56 Aligned_cols=174 Identities=14% Similarity=-0.002 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH---------HHHHHHHHHHHHHHHHhhcCCCCCChhhhHHHHh
Q 009469 330 ERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVF---------YSFGSLGSIWFALWLKKAYSSPKEDPELRAEEKR 400 (534)
Q Consensus 330 ~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f---------~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 400 (534)
+|.+-.+..-...-...++-|+++-+.-.. ||-... .+-..-....++..+.+-|+..+..++.+...
T Consensus 123 eR~~~~~~~v~~~~~~~~vY~~~ahW~W~~-GwL~~lG~~DfAG~~vVH~~gG~~aL~~a~~LgpR~gr~~~~~~~~~-- 199 (404)
T TIGR03644 123 ERMKLWPFLLFAVVLTGFIYPIEGSWTWGG-GWLDDLGFSDFAGSGIVHMAGAAAALAGVLLLGPRKGKYGKNGEVNP-- 199 (404)
T ss_pred hcccHHHHHHHHHHHHHHHHhhhhhheeCc-hHHhhcCchhhcCceEEecchHHHHHHHHheeccCCCCCccCCCcCC--
Q ss_pred hhhCCCccccccccccHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHH
Q 009469 401 HILGGSISKEAVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMG 480 (534)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~ 480 (534)
++........+..++..++.+++..-...-.... ..........+....+..+..+.
T Consensus 200 --------------------~~~~n~~~~~lG~~iLw~gW~gFN~gs~l~~~~~---~~~~~~~~a~~NT~la~a~g~l~ 256 (404)
T TIGR03644 200 --------------------IPGSNLPLATLGTFILWMGWFGFNGGSQLALSDV---ADANAVARIFANTNAAAAGGAIA 256 (404)
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHHHhhcchhhhhcccc---cchHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhhhcccC
Q 009469 481 GWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQV 534 (534)
Q Consensus 481 g~l~dr~g~r~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v 534 (534)
..+.++...++... ....-+.+.-.+......-...++.++++.+++++
T Consensus 257 ~~~~~~~~~gk~~~-----~~~~nG~LAGLVaITa~~~~v~p~~A~iiG~iag~ 305 (404)
T TIGR03644 257 ALLLTKLLFGKADL-----TMVLNGALAGLVAITAEPLTPSPLAATLIGAVGGV 305 (404)
T ss_pred HHHHHHHHcCCCCH-----HHHHHHHHhhhhhhccccCCCCHHHHHHHHHHHHH
No 361
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.62 E-value=25 Score=33.98 Aligned_cols=30 Identities=13% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 463 GLFCVLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 463 g~l~~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
++++.+..+.-+++..+.-|+..++|...+
T Consensus 108 Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs~W 137 (381)
T PF05297_consen 108 GIVILFLCCLLALGVWFYMWLLRELGASFW 137 (381)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 333333333334444444566677776544
No 362
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.54 E-value=4.2e+02 Score=29.85 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=29.4
Q ss_pred HHHHHHHhhh----CCchHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcc
Q 009469 260 IVGGIWADKF----GGKPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGE 311 (534)
Q Consensus 260 ~~~G~l~Dr~----Grr~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~ 311 (534)
.+.+-+.|.= ||.+-++++.++++++.+...+.... .+.+...-++.+++.
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~-p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK-PWLFPFLLTLLTFGF 95 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHH
Confidence 3445566643 45666788888888888777766522 333444444444443
No 363
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=24.36 E-value=8.6e+02 Score=25.68 Aligned_cols=68 Identities=7% Similarity=-0.194 Sum_probs=37.4
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009469 421 LSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSK 490 (534)
Q Consensus 421 l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~~~~~~g~s~~~~g~l~~~~~~~~iig~~i~g~l~dr~g~r 490 (534)
+-.+.-++..+...+...+.+++..++.-.... -.+.....+...+..+.+.+..+++-....++.|-
T Consensus 91 fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~~l~~ifG~r~l~~l~~~ 158 (442)
T COG1457 91 FGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLMTLVTIFGYRALHKLERI 158 (442)
T ss_pred ccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 333444555555566666777777666444311 11333344445555566666666666677666655
No 364
>PRK11715 inner membrane protein; Provisional
Probab=24.25 E-value=8.6e+02 Score=25.63 Aligned_cols=76 Identities=12% Similarity=0.044 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhhCCchH-----HHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhhcccchhhHHHHHHhhhccCCcc
Q 009469 257 LTQIVGGIWADKFGGKPV-----LGFGVIWWSVATVLTPVAARIGLPFLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSER 331 (534)
Q Consensus 257 ~~~~~~G~l~Dr~Grr~~-----l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l~Gig~g~~~~~~~~~i~~~~~~~~r 331 (534)
...+..=++.+...++++ +++|+.+...-.++.+++-+.++.. +-++. .+++......|++......+|
T Consensus 312 ~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~---AYliA---a~a~v~li~~Y~~~vl~~~k~ 385 (436)
T PRK11715 312 ALTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFTL---AYLIA---ALACVLLIGFYLSAVLRSWKR 385 (436)
T ss_pred HHHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhchHH---HHHHH---HHHHHHHHHHHHHHHHhcchH
Confidence 333344456777777665 5667777666667777776433322 22222 222334455677777767777
Q ss_pred hhHHHHH
Q 009469 332 SRSLAFV 338 (534)
Q Consensus 332 g~~~gi~ 338 (534)
|..++..
T Consensus 386 g~~~~~~ 392 (436)
T PRK11715 386 GLLFAAA 392 (436)
T ss_pred HHHHHHH
Confidence 7666543
No 365
>COG2119 Predicted membrane protein [Function unknown]
Probab=24.09 E-value=5.6e+02 Score=23.44 Aligned_cols=77 Identities=12% Similarity=0.201 Sum_probs=44.0
Q ss_pred HHHHHHHHHHH-HHhhhhHHHHhHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH
Q 009469 208 VVLLCFSAFLL-CNMDRVNMSIAILPMSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (534)
Q Consensus 208 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 286 (534)
.++..+...|+ ...+.+.+... .+..+.+......--......+...++-+.+.++++|+..|.+-.++.+++.+..
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiATI--aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIATI--ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHHH--HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 44444444444 35555544433 2445555432222222233345566777788889999999998887777665544
No 366
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=24.06 E-value=7.7e+02 Score=25.01 Aligned_cols=19 Identities=5% Similarity=0.097 Sum_probs=10.4
Q ss_pred cchhhHHHHHHhhhccCCc
Q 009469 312 GVAMPAMNNMLSKWIPVSE 330 (534)
Q Consensus 312 g~~~~~~~~~i~~~~~~~~ 330 (534)
+...+....++++.+..++
T Consensus 345 ~~P~a~~~~~~a~~~~~~~ 363 (385)
T PF03547_consen 345 AMPTAINSFVIASLYGLDE 363 (385)
T ss_pred cCCchHHHHHHHHHhCCCH
Confidence 4444555556666665443
No 367
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=23.94 E-value=5.1e+02 Score=28.35 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhh----ccCChHHHHHHHHHHhhcccchhhHH
Q 009469 243 TVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVA----ARIGLPFLLIMRAFMGIGEGVAMPAM 318 (534)
Q Consensus 243 ~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~----~~~~~~~ll~~r~l~Gig~g~~~~~~ 318 (534)
+.|+...++.+|...|+-+..-+.+ .|-+..+ ++.++..+..++..+. ...++ ..++.. ++.+...++.
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~G~---~aG~~t~t~~ 523 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLFL-LGIVVTILPLIITMLIGKYVLKYDP--ALLLGA---LAGARTATPA 523 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCH--HHHHHH---hhccCCCcHH
Confidence 4788888888888888888777744 5555544 4444444443322221 11122 223333 3345566777
Q ss_pred HHHHhhhccCCc
Q 009469 319 NNMLSKWIPVSE 330 (534)
Q Consensus 319 ~~~i~~~~~~~~ 330 (534)
.+...|..+.+.
T Consensus 524 l~~a~~~~~~~~ 535 (562)
T TIGR03802 524 LGAVLERAGSSV 535 (562)
T ss_pred HHHHHHhcCCCC
Confidence 788888775443
No 368
>PRK02237 hypothetical protein; Provisional
Probab=23.60 E-value=4.2e+02 Score=21.86 Aligned_cols=36 Identities=8% Similarity=-0.048 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 009469 461 ESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITA 496 (534)
Q Consensus 461 ~~g~l~~~~~~~~iig~~i~g~l~dr~g~r~~~i~~ 496 (534)
..|=.++.++...++.+++.++..|+...-+....+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iG 92 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIG 92 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHh
Confidence 366778888889999999999999999877766543
No 369
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=23.52 E-value=9e+02 Score=25.63 Aligned_cols=11 Identities=18% Similarity=0.356 Sum_probs=5.9
Q ss_pred HHHHhhhCCch
Q 009469 263 GIWADKFGGKP 273 (534)
Q Consensus 263 G~l~Dr~Grr~ 273 (534)
..+..++++|+
T Consensus 105 ~~l~k~l~~~~ 115 (465)
T PF03606_consen 105 NLLIKPLKGKK 115 (465)
T ss_pred HHHHHHhcCCc
Confidence 44556665543
No 370
>COG1138 CcmF Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]
Probab=23.33 E-value=1e+03 Score=26.33 Aligned_cols=109 Identities=9% Similarity=0.045 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCC--chHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHH-----Hhh--cccc
Q 009469 243 TVGLIQSSFFWGYLLTQIVGGIWADKFGG--KPVLGFGVIWWSVATVLTPVAARIGLPFLLIMRAF-----MGI--GEGV 313 (534)
Q Consensus 243 ~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr--r~~l~~g~~~~~i~~~l~~~~~~~~~~~ll~~r~l-----~Gi--g~g~ 313 (534)
-.|+....-..+..+..++.|++-..+.| |+.-..+.+...++.++- ++|.+....=- .-+ ..=+
T Consensus 177 YlGYvgfsV~fs~avA~l~~grld~~~ar~~rpWtl~aw~fLT~GIvlG------s~WAY~eLGWGGwWfWDPVENaSlm 250 (648)
T COG1138 177 YLGYVGFSVAFSVAVAGLLTGRLDSAWARWKRPWTLAAWLFLTLGIVLG------SWWAYYELGWGGWWFWDPVENASLM 250 (648)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHhhhHHHHHHHHHHHHHHhh------HHHHHHHhcCccccccCcccccccc
Confidence 35666666666667777777777554433 444445555555555443 23333221100 000 0111
Q ss_pred hhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009469 314 AMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQ 358 (534)
Q Consensus 314 ~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~ 358 (534)
.+-...+++-....+++|+. +..+.....+-...-.+++.++..
T Consensus 251 PWL~gtALlHsl~vtekr~~-f~~wt~llai~afsL~llgTflvR 294 (648)
T COG1138 251 PWLAGTALLHSLLVTEKRGA-FKAWTLLLAILAFSLSLLGTFLVR 294 (648)
T ss_pred hHHHHHHHHhhhHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666666677788887 776666555555555555555543
No 371
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.29 E-value=4.1e+02 Score=21.61 Aligned_cols=17 Identities=24% Similarity=0.323 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhhcccC
Q 009469 345 GSVTGLAVSPILIQKFG 361 (534)
Q Consensus 345 G~~igp~i~~~l~~~~g 361 (534)
..++|..++-+|=.+++
T Consensus 55 pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 34444455555544554
No 372
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=22.84 E-value=7.9e+02 Score=25.21 Aligned_cols=29 Identities=7% Similarity=-0.041 Sum_probs=22.0
Q ss_pred HhhhhHHHHhHHHHHhhhCCCcchhHHHH
Q 009469 220 NMDRVNMSIAILPMSKEFNWNSTTVGLIQ 248 (534)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~s~~~~g~i~ 248 (534)
.+..-.....+....+++|+++..+|.+.
T Consensus 235 v~lAe~lv~sIe~~v~~~Glp~afiGvII 263 (366)
T PRK10599 235 IAVTKMNASPLETLLTSMNAPVAFTGFLV 263 (366)
T ss_pred HHHHHHhHhhHHHHHHhcCCCHHHHHHHH
Confidence 33355566777788899999999999775
No 373
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=22.54 E-value=9.3e+02 Score=25.46 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=63.6
Q ss_pred HHhhhCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc-CChHHHHHHHHHHhhcc
Q 009469 233 MSKEFNWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR-IGLPFLLIMRAFMGIGE 311 (534)
Q Consensus 233 ~~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~-~~~~~ll~~r~l~Gig~ 311 (534)
+...++++..+...+.++-.+...++.++--....+.|-|-....|.-...++-++...... ......+.+-+..|+..
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~ 119 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVY 119 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 45778999999999999999999999988665444455565555555555555444433321 12555555555555544
Q ss_pred cchhhHHHH-HHhhhccCCcchhH
Q 009469 312 GVAMPAMNN-MLSKWIPVSERSRS 334 (534)
Q Consensus 312 g~~~~~~~~-~i~~~~~~~~rg~~ 334 (534)
-.. ..... .+.+.+||---|..
T Consensus 120 ~li-~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 120 FLI-SPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHH-HHHHHHHHHHhCCCceEEeE
Confidence 333 33333 77888888666543
No 374
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=22.32 E-value=7e+02 Score=23.94 Aligned_cols=50 Identities=10% Similarity=-0.019 Sum_probs=33.5
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHH
Q 009469 238 NWNSTTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATV 287 (534)
Q Consensus 238 g~s~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~ 287 (534)
+.+...+.+......+...+-..-+-.+.++.|.|..+.-..-...++.+
T Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 72 (294)
T PF03706_consen 23 SANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFF 72 (294)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 55666666666777777777788888888888877666555444444443
No 375
>COG3619 Predicted membrane protein [Function unknown]
Probab=22.28 E-value=6.8e+02 Score=23.74 Aligned_cols=31 Identities=3% Similarity=0.080 Sum_probs=17.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 009469 241 STTVGLIQSSFFWGYLLTQIVGGIWADKFGG 271 (534)
Q Consensus 241 ~~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Gr 271 (534)
.........+..+...++......+..|..+
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3444555666666666775554444544443
No 376
>PRK04972 putative transporter; Provisional
Probab=21.70 E-value=7e+02 Score=27.26 Aligned_cols=43 Identities=14% Similarity=0.117 Sum_probs=29.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHH
Q 009469 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVAT 286 (534)
Q Consensus 242 ~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~ 286 (534)
.+.|+...+|.+|...++-+..-+-. .|.|..+ ++.++..++.
T Consensus 62 ~~~gl~lF~~~vG~~~Gp~F~~~l~~-~g~~~~~-~~~~~~~~~~ 104 (558)
T PRK04972 62 LNLGFMLFIFCVGVEAGPNFFSIFFR-DGKNYLM-LALVMVGSAL 104 (558)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHH
Confidence 36788899999999999988887765 4555544 3444444433
No 377
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.69 E-value=1.8e+02 Score=30.39 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccc
Q 009469 467 VLPWLTMAVFANMGGWIADTLVSKGL 492 (534)
Q Consensus 467 ~~~~~~~iig~~i~g~l~dr~g~r~~ 492 (534)
.+..+..-+....+|-+-.|.|.|++
T Consensus 334 ~vYAlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 334 VVYALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred HHHHhcccccccccceeeehhccHHH
Confidence 34445555555566666667766553
No 378
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=21.55 E-value=1.5e+02 Score=28.99 Aligned_cols=95 Identities=13% Similarity=0.227 Sum_probs=52.7
Q ss_pred HhhhCCCcchhHHHHHHHHHHHHHHHHHHHH-HHhhhCCchHHHHHHHHHHHHHHHHhhhccCCh-HHHHHHHHHHhhcc
Q 009469 234 SKEFNWNSTTVGLIQSSFFWGYLLTQIVGGI-WADKFGGKPVLGFGVIWWSVATVLTPVAARIGL-PFLLIMRAFMGIGE 311 (534)
Q Consensus 234 ~~~~g~s~~~~g~i~s~~~l~~~~~~~~~G~-l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~~~~-~~ll~~r~l~Gig~ 311 (534)
.+++++......++-.+.++.....+.+-.- --++...|.....|.+++..+...+.+-+. ++ ..+++..++.|++.
T Consensus 229 iddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~ilLlpr-~i~symyAisvfIGIAn 307 (412)
T KOG4830|consen 229 IDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAVILLLPR-GIKSYMYAISVFIGIAN 307 (412)
T ss_pred eehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhheeeccc-chHHHHHHHHHHHHHHH
Confidence 5566666666666655555544443333211 112222333455666666555544443332 22 33567778889999
Q ss_pred cchhhHHHHHHhhhccCC
Q 009469 312 GVAMPAMNNMLSKWIPVS 329 (534)
Q Consensus 312 g~~~~~~~~~i~~~~~~~ 329 (534)
+........+-++...++
T Consensus 308 Aimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 308 AIMLVTSLSITAVLINKN 325 (412)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 988887777777776443
No 379
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=21.48 E-value=6e+02 Score=22.81 Aligned_cols=80 Identities=19% Similarity=0.047 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhcc--CChHHHHHHHHHHhhcccchhhHHH
Q 009469 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAAR--IGLPFLLIMRAFMGIGEGVAMPAMN 319 (534)
Q Consensus 242 ~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~~--~~~~~ll~~r~l~Gig~g~~~~~~~ 319 (534)
.+.|+...++.+|...++-+..-+.+. |-|. +..+.++..+..++...... ..+....+...+.| +...++..
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aG---a~T~tp~L 130 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAG---ALTSTPAL 130 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHc---cccCcHHH
Confidence 357788889999998888887777665 5544 44444444444433322210 01222333333333 44566777
Q ss_pred HHHhhhc
Q 009469 320 NMLSKWI 326 (534)
Q Consensus 320 ~~i~~~~ 326 (534)
+...|..
T Consensus 131 ~~A~~~~ 137 (169)
T PF06826_consen 131 AAAQEAI 137 (169)
T ss_pred HHHHHhh
Confidence 7778874
No 380
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.46 E-value=6.5e+02 Score=23.23 Aligned_cols=29 Identities=17% Similarity=0.392 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009469 425 PVWALIISHFCHNWGTFILLTWMPTYYNQ 453 (534)
Q Consensus 425 ~~~~~~l~~~~~~~~~~~~~~~lp~~~~~ 453 (534)
..|..++-.++..++.+.+..-+..++..
T Consensus 77 ~~~~~~ld~~L~~~~if~~~~gi~~~f~~ 105 (206)
T PF06570_consen 77 NPWLMALDNSLLFFGIFSLLFGIMGFFSP 105 (206)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45666666665555555555544444443
No 381
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.26 E-value=8.8e+02 Score=25.48 Aligned_cols=73 Identities=16% Similarity=0.226 Sum_probs=41.5
Q ss_pred HHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 302 IMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 302 ~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
+.-.+.|++...++....++ + ++.+...+..-++...-..++-.+...+- +|+....+.+.+.++-.++..
T Consensus 326 iQY~LVGlAl~lFYlLLLSl-S-----Ehi~F~~AYliAa~a~i~Li~~Y~~~vl~---~~k~~~~~~~~L~~LY~~Ly~ 396 (430)
T PF06123_consen 326 IQYLLVGLALVLFYLLLLSL-S-----EHIGFNLAYLIAALACIGLISLYLSSVLK---SWKRGLIFAGLLAALYGFLYV 396 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHH-H-----hhhchHHHHHHHHHHHHHHHHHHHHHHHh---cchHHHHHHHHHHHHHHHHHH
Confidence 34455666655554443332 3 45566666655555554555554444442 588888877777776666655
Q ss_pred Hh
Q 009469 382 KK 383 (534)
Q Consensus 382 ~~ 383 (534)
.+
T Consensus 397 lL 398 (430)
T PF06123_consen 397 LL 398 (430)
T ss_pred HH
Confidence 54
No 382
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=21.18 E-value=3e+02 Score=19.24 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-hCCchHHHHHHHHH
Q 009469 249 SSFFWGYLLTQIVGGIWADK-FGGKPVLGFGVIWW 282 (534)
Q Consensus 249 s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~g~~~~ 282 (534)
....+...+.....|+..|+ ++.++...+..++.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 34455556666677777776 56655554444333
No 383
>PRK04972 putative transporter; Provisional
Probab=20.29 E-value=7.4e+02 Score=27.06 Aligned_cols=96 Identities=16% Similarity=0.071 Sum_probs=52.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHhhhc----cCChHHHHHHHHHHhhcccchhhH
Q 009469 242 TTVGLIQSSFFWGYLLTQIVGGIWADKFGGKPVLGFGVIWWSVATVLTPVAA----RIGLPFLLIMRAFMGIGEGVAMPA 317 (534)
Q Consensus 242 ~~~g~i~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~g~~~~~i~~~l~~~~~----~~~~~~ll~~r~l~Gig~g~~~~~ 317 (534)
.+.|+...++.+|...++-+..-+.+ .|-+.++ +|.++..+..+...+.. ..++ . +.+-.++.+...++
T Consensus 445 ~~~GL~lFla~vGl~aG~~f~~~~~~-~g~~~~~-~g~~~t~~~~~~~~~~~~~~~k~~~--~---~~~G~~aG~~t~~~ 517 (558)
T PRK04972 445 KEFGLMVFMAGVGLSAGSGINNGLGA-VGGQMLI-AGLIVSLVPVVICFLFGAYVLRMNR--A---LLFGAIMGARTCAP 517 (558)
T ss_pred HHHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCH--H---HHHHHHhCCCCCcH
Confidence 35677777777777777767666644 5555443 44444443333222221 1122 2 22223444556688
Q ss_pred HHHHHhhhccCCcchhHHHHHHHHHHH
Q 009469 318 MNNMLSKWIPVSERSRSLAFVYSGMYL 344 (534)
Q Consensus 318 ~~~~i~~~~~~~~rg~~~gi~~~~~~l 344 (534)
..+++.+..+.+.-...++..+...++
T Consensus 518 ~l~~~~~~~~~~~~~~gYa~~yp~~~i 544 (558)
T PRK04972 518 AMEIISDTARSNIPALGYAGTYAIANV 544 (558)
T ss_pred HHHHHHhhcCCCCcccccHhHHHHHHH
Confidence 888888888665555555554443333
No 384
>PRK11715 inner membrane protein; Provisional
Probab=20.28 E-value=8.8e+02 Score=25.55 Aligned_cols=73 Identities=12% Similarity=0.190 Sum_probs=42.3
Q ss_pred HHHHHHhhcccchhhHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Q 009469 302 IMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLAFVYSGMYLGSVTGLAVSPILIQKFGWPSVFYSFGSLGSIWFALWL 381 (534)
Q Consensus 302 ~~r~l~Gig~g~~~~~~~~~i~~~~~~~~rg~~~gi~~~~~~lG~~igp~i~~~l~~~~gw~~~f~i~~~~~~i~~i~~~ 381 (534)
+.-.+.|++...++-...++ .++.|...+..-++...-..++-.+...+ -+|+....+.+.+.++-.++..
T Consensus 332 iQYlLVGlAl~lFYLLLLSl------SEHigF~~AYliAa~a~v~li~~Y~~~vl---~~~k~g~~~~~~L~~LYg~Ly~ 402 (436)
T PRK11715 332 VQYLLVGLALVLFYLLLLSL------SEHIGFTLAYLIAALACVLLIGFYLSAVL---RSWKRGLLFAAALAALYGVLYG 402 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HhhhchHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHHHHHHHHHH
Confidence 34455666655554443332 35567666666555555555555554444 2588888777777776666655
Q ss_pred Hh
Q 009469 382 KK 383 (534)
Q Consensus 382 ~~ 383 (534)
.+
T Consensus 403 lL 404 (436)
T PRK11715 403 LL 404 (436)
T ss_pred HH
Confidence 54
Done!